Metagenome / Metatranscriptome Family F069307

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F069307
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	89 residues
Representative Sequence	MIERLTTNLGALARLSPAELATERGSRVAADCADAIRLELDCPQQELTSDQRELLAALGDLLDTSTRDERVVRIASAACRALGVRPAEPHA
Number of Associated Samples	107
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	80.65 %
% of genes near scaffold ends (potentially truncated)	29.84 %
% of genes from short scaffolds (< 2000 bps)	72.58 %
Associated GOLD sequencing projects	89
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (88.710 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere (11.290 % of family members)
Environment Ontology (ENVO)	Unclassified (64.516 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (79.839 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 69.23% β-sheet: 0.00% Coil/Unstructured: 30.77%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF06452	CBM9_1	21.77
PF07366	SnoaL	12.90
PF00083	Sugar_tr	8.87
PF07690	MFS_1	3.23
PF02515	CoA_transf_3	3.23
PF02719	Polysacc_synt_2	0.81
PF08621	RPAP1_N	0.81
PF07676	PD40	0.81
PF07719	TPR_2	0.81
PF11700	ATG22	0.81
PF04542	Sigma70_r2	0.81
PF12840	HTH_20	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	3.23
COG0451	Nucleoside-diphosphate-sugar epimerase	Cell wall/membrane/envelope biogenesis [M]	1.61
COG0702	Uncharacterized conserved protein YbjT, contains NAD(P)-binding and DUF2867 domains	General function prediction only [R]	1.61
COG1086	NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC	Cell wall/membrane/envelope biogenesis [M]	1.61
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.81
COG1087	UDP-glucose 4-epimerase	Cell wall/membrane/envelope biogenesis [M]	0.81
COG1088	dTDP-D-glucose 4,6-dehydratase	Cell wall/membrane/envelope biogenesis [M]	0.81
COG1089	GDP-D-mannose dehydratase	Cell wall/membrane/envelope biogenesis [M]	0.81
COG1091	dTDP-4-dehydrorhamnose reductase	Cell wall/membrane/envelope biogenesis [M]	0.81
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.81
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.81
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.71 %
Unclassified	root	N/A	11.29 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.71 %
Unclassified	root	N/A	11.29 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.71 %
Unclassified	root	N/A	11.29 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	14.52 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	14.52 %
Unclassified	root	N/A	11.29 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	14.52 %
Unclassified	root	N/A	11.29 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.23 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1.61 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.29 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	8.06 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.23 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	1.61 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.29 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	8.06 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.23 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1.61 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.29 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	8.06 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.23 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.81 %
Sphingopyxis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.29 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	3.23 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.23 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	1.61 %
Paraburkholderia humisilvae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia humisilvae	0.81 %
Sphingopyxis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.29 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3.23 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3.23 %
Gemmatimonas phototrophica	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas phototrophica	1.61 %
Paraburkholderia humisilvae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia humisilvae	0.81 %
Sphingopyxis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2140918013\|NODE_325_length_1219_cov_8.289581	Not Available	1251	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0625518	Not Available	1073	Open in IMG/M
3300000956\|JGI10216J12902_103657958	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300000956\|JGI10216J12902_107025064	Not Available	758	Open in IMG/M
3300004114\|Ga0062593_101154033	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300004114\|Ga0062593_103205018	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	524	Open in IMG/M
3300004479\|Ga0062595_100795581	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300005093\|Ga0062594_100129429	All Organisms → cellular organisms → Bacteria	1596	Open in IMG/M
3300005290\|Ga0065712_10522334	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300005293\|Ga0065715_10147885	All Organisms → cellular organisms → Bacteria	1765	Open in IMG/M
3300005328\|Ga0070676_10042601	All Organisms → cellular organisms → Bacteria → Proteobacteria	2636	Open in IMG/M
3300005329\|Ga0070683_100675763	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
3300005330\|Ga0070690_100265651	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1219	Open in IMG/M
3300005331\|Ga0070670_100015531	All Organisms → cellular organisms → Bacteria → Proteobacteria	6539	Open in IMG/M
3300005334\|Ga0068869_100330422	All Organisms → cellular organisms → Bacteria	1238	Open in IMG/M
3300005335\|Ga0070666_10415336	All Organisms → cellular organisms → Bacteria	968	Open in IMG/M
3300005338\|Ga0068868_100230245	All Organisms → cellular organisms → Bacteria	1554	Open in IMG/M
3300005338\|Ga0068868_101943289	Not Available	558	Open in IMG/M
3300005339\|Ga0070660_100632721	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300005340\|Ga0070689_100701509	All Organisms → cellular organisms → Bacteria	884	Open in IMG/M
3300005343\|Ga0070687_100004781	All Organisms → cellular organisms → Bacteria	5422	Open in IMG/M
3300005344\|Ga0070661_100218015	All Organisms → cellular organisms → Bacteria	1463	Open in IMG/M
3300005347\|Ga0070668_100009855	All Organisms → cellular organisms → Bacteria → Proteobacteria	7077	Open in IMG/M
3300005355\|Ga0070671_100068039	All Organisms → cellular organisms → Bacteria	2970	Open in IMG/M
3300005355\|Ga0070671_100889188	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300005356\|Ga0070674_100049263	All Organisms → cellular organisms → Bacteria → Proteobacteria	2896	Open in IMG/M
3300005356\|Ga0070674_100350100	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1193	Open in IMG/M
3300005364\|Ga0070673_100755633	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300005364\|Ga0070673_101038830	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300005436\|Ga0070713_101931543	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300005437\|Ga0070710_11037981	Not Available	599	Open in IMG/M
3300005438\|Ga0070701_10143354	All Organisms → cellular organisms → Bacteria	1369	Open in IMG/M
3300005440\|Ga0070705_100375916	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1044	Open in IMG/M
3300005459\|Ga0068867_100694999	All Organisms → cellular organisms → Bacteria	897	Open in IMG/M
3300005459\|Ga0068867_100987371	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300005459\|Ga0068867_101010283	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300005459\|Ga0068867_102422345	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300005545\|Ga0070695_100368270	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1081	Open in IMG/M
3300005547\|Ga0070693_100423817	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	928	Open in IMG/M
3300005564\|Ga0070664_100084784	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	2735	Open in IMG/M
3300005577\|Ga0068857_100128496	All Organisms → cellular organisms → Bacteria → Proteobacteria	2284	Open in IMG/M
3300005578\|Ga0068854_101854337	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300005614\|Ga0068856_101554747	All Organisms → cellular organisms → Bacteria	675	Open in IMG/M
3300005618\|Ga0068864_100021044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5462	Open in IMG/M
3300005718\|Ga0068866_10768357	Not Available	667	Open in IMG/M
3300005764\|Ga0066903_103510280	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300005834\|Ga0068851_10025755	All Organisms → cellular organisms → Bacteria	2887	Open in IMG/M
3300006169\|Ga0082029_1670580	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	842	Open in IMG/M
3300006237\|Ga0097621_100388746	All Organisms → cellular organisms → Bacteria	1247	Open in IMG/M
3300006358\|Ga0068871_101173313	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300006579\|Ga0074054_11056357	All Organisms → cellular organisms → Bacteria	547	Open in IMG/M
3300006845\|Ga0075421_102160927	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300006852\|Ga0075433_10748861	All Organisms → cellular organisms → Bacteria	855	Open in IMG/M
3300006871\|Ga0075434_102106669	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300009094\|Ga0111539_10123094	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas phototrophica	3040	Open in IMG/M
3300009094\|Ga0111539_10138622	All Organisms → cellular organisms → Bacteria	2849	Open in IMG/M
3300009148\|Ga0105243_11555056	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300009176\|Ga0105242_10407379	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1271	Open in IMG/M
3300009553\|Ga0105249_10002551	All Organisms → cellular organisms → Bacteria → Proteobacteria	15766	Open in IMG/M
3300010398\|Ga0126383_11468190	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300012493\|Ga0157355_1018969	All Organisms → cellular organisms → Bacteria	622	Open in IMG/M
3300012509\|Ga0157334_1013343	All Organisms → cellular organisms → Bacteria	812	Open in IMG/M
3300012514\|Ga0157330_1025029	Not Available	710	Open in IMG/M
3300012957\|Ga0164303_10869909	Not Available	628	Open in IMG/M
3300012957\|Ga0164303_11129234	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	568	Open in IMG/M
3300012958\|Ga0164299_11129021	Not Available	588	Open in IMG/M
3300012960\|Ga0164301_11814039	Not Available	513	Open in IMG/M
3300012986\|Ga0164304_10549808	All Organisms → cellular organisms → Bacteria	853	Open in IMG/M
3300012987\|Ga0164307_10213424	Not Available	1323	Open in IMG/M
3300012988\|Ga0164306_10962224	Not Available	700	Open in IMG/M
3300013296\|Ga0157374_10353066	All Organisms → cellular organisms → Bacteria	1461	Open in IMG/M
3300013297\|Ga0157378_10388536	All Organisms → cellular organisms → Bacteria	1372	Open in IMG/M
3300013306\|Ga0163162_10015794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	7379	Open in IMG/M
3300013306\|Ga0163162_10073118	All Organisms → cellular organisms → Bacteria	3484	Open in IMG/M
3300013307\|Ga0157372_10322759	All Organisms → cellular organisms → Bacteria	1798	Open in IMG/M
3300013308\|Ga0157375_10093318	All Organisms → cellular organisms → Bacteria	3076	Open in IMG/M
3300014325\|Ga0163163_10108290	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	2806	Open in IMG/M
3300014969\|Ga0157376_11617363	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300015265\|Ga0182005_1168467	All Organisms → cellular organisms → Bacteria	645	Open in IMG/M
3300015371\|Ga0132258_10176544	All Organisms → cellular organisms → Bacteria → Proteobacteria	5157	Open in IMG/M
3300015371\|Ga0132258_10411663	All Organisms → cellular organisms → Bacteria	3361	Open in IMG/M
3300015373\|Ga0132257_100547732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia humisilvae	1424	Open in IMG/M
3300021445\|Ga0182009_10178120	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1024	Open in IMG/M
3300025315\|Ga0207697_10010954	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	3850	Open in IMG/M
3300025321\|Ga0207656_10034968	All Organisms → cellular organisms → Bacteria	2101	Open in IMG/M
3300025899\|Ga0207642_11042720	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	527	Open in IMG/M
3300025901\|Ga0207688_10014857	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4225	Open in IMG/M
3300025903\|Ga0207680_10208609	All Organisms → cellular organisms → Bacteria	1335	Open in IMG/M
3300025907\|Ga0207645_10002175	All Organisms → cellular organisms → Bacteria	15653	Open in IMG/M
3300025909\|Ga0207705_10880841	All Organisms → cellular organisms → Bacteria	694	Open in IMG/M
3300025919\|Ga0207657_10229511	All Organisms → cellular organisms → Bacteria → Proteobacteria	1485	Open in IMG/M
3300025923\|Ga0207681_10061444	All Organisms → cellular organisms → Bacteria → Proteobacteria	2582	Open in IMG/M
3300025926\|Ga0207659_10657049	All Organisms → cellular organisms → Bacteria	896	Open in IMG/M
3300025927\|Ga0207687_10225753	All Organisms → cellular organisms → Bacteria	1477	Open in IMG/M
3300025931\|Ga0207644_11107695	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300025931\|Ga0207644_11391195	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300025932\|Ga0207690_10164155	All Organisms → cellular organisms → Bacteria	1658	Open in IMG/M
3300025933\|Ga0207706_10500308	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300025934\|Ga0207686_10339275	Not Available	1128	Open in IMG/M
3300025934\|Ga0207686_10458125	All Organisms → cellular organisms → Bacteria	982	Open in IMG/M
3300025934\|Ga0207686_11489427	All Organisms → cellular organisms → Bacteria	558	Open in IMG/M
3300025936\|Ga0207670_10775339	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300025941\|Ga0207711_10138636	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	2187	Open in IMG/M
3300025944\|Ga0207661_10305183	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	1428	Open in IMG/M
3300025945\|Ga0207679_10070982	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → Gemmatimonas phototrophica	2626	Open in IMG/M
3300025960\|Ga0207651_10104105	All Organisms → cellular organisms → Bacteria → Proteobacteria	2114	Open in IMG/M
3300025986\|Ga0207658_12060085	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300026023\|Ga0207677_11994159	Not Available	540	Open in IMG/M
3300026075\|Ga0207708_10181301	All Organisms → cellular organisms → Bacteria → Proteobacteria	1672	Open in IMG/M
3300026078\|Ga0207702_10635933	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300026088\|Ga0207641_10914790	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300026089\|Ga0207648_10067815	All Organisms → cellular organisms → Bacteria	3109	Open in IMG/M
3300026089\|Ga0207648_10862039	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300026095\|Ga0207676_10038780	All Organisms → cellular organisms → Bacteria	3639	Open in IMG/M
3300026116\|Ga0207674_10109536	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingopyxis	2738	Open in IMG/M
3300026118\|Ga0207675_100003822	All Organisms → cellular organisms → Bacteria	14653	Open in IMG/M
3300027523\|Ga0208890_1042888	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300027907\|Ga0207428_10061349	All Organisms → cellular organisms → Bacteria	2977	Open in IMG/M
3300028379\|Ga0268266_11027474	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300031366\|Ga0307506_10202054	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	731	Open in IMG/M
3300031938\|Ga0308175_100033532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4276	Open in IMG/M
3300031940\|Ga0310901_10075051	All Organisms → cellular organisms → Bacteria	1167	Open in IMG/M
3300032075\|Ga0310890_10335161	All Organisms → cellular organisms → Bacteria	1100	Open in IMG/M
3300033412\|Ga0310810_10063942	All Organisms → cellular organisms → Bacteria	4455	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	66.13%
Environmental	Environmental	33.87%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	66.13%
Terrestrial	Environmental → Terrestrial	33.87%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	37.90%
Soil	Environmental → Terrestrial → Soil	33.87%
Rhizoplane	Host-Associated → Plants → Rhizoplane	25.81%
Roots	Host-Associated → Plants → Roots	2.42%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	22.58%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	21.77%
Soil	Host-Associated → Plants → Rhizosphere → Soil	21.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	16.13%
Loam	Environmental → Terrestrial → Soil → Loam	11.29%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.03%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	2.42%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	21.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	21.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	16.13%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.71%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.03%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.23%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.23%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.42%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	2.42%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.81%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	11.29%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	9.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	6.45%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	5.65%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.23%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.23%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.23%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.42%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.42%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	1.61%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	1.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.81%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.81%
Termite Nest	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest	0.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2140918013	Soil microbial communities from Great Prairies - Iowa soil (MSU Assemblies)	Environmental	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300006169	Termite nest microbial communities from Madurai, India	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012493	Unplanted soil (control) microbial communities from North Carolina - M.Soil.10.yng.090610	Environmental	Open in IMG/M
3300012509	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_6	Environmental	Open in IMG/M
3300012514	Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.old.130510	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015265	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027523	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Iowa-Corn-GraphCirc_02645240	2140918013	Soil	MIERLTTSLGALARLSPAELATERGSRVAADCADAIRLELDCPQQELTSDQRELLAALGDLLDTSTRDERVVRIASAACRALGVRPAEPHA
ICChiseqgaiiDRAFT_06255181	3300000033	Soil	MIERLTTSLGALARLSPAELATERGSRVAADCADAIRLELDCPQQELTSDQRELLAALGDLLDTSTRDERVVRI
JGI10216J12902_1036579582	3300000956	Soil	ERLTTSLDVLARMSPAELATERGSRVAADCADAIRLELDCPQQELTPDQRELLSALGDLLDTSRRDEAVVRLASAACWALGVRPG*
JGI10216J12902_1070250641	3300000956	Soil	MIERLTTNLGDLARLSPAELATQRGSRVAADCADAIRLELDCPQQEVTPDQRELLAALGDLLDTSPHDEMVVRIASAASRA
Ga0062593_1011540331	3300004114	Soil	MIERLTTNLGALARMSPAELATEWGGRVAADCADAIRLELDCPQQELTSDQRELLFALGDLLDTTPLGERVVRLASAACRALGVRPG*
Ga0062593_1032050181	3300004114	Soil	MIERLTTSLGALARLSPAELATERGSRVAADCADAIRLELDCPQQELTSDQRELLAALGDLLDTSTRDERVVRTASAACRALGVRPAEPHA*
Ga0062595_1007955812	3300004479	Soil	LIERLTTNLGALARLSPAELATEGGSRVAADCADAIRLELDCPQQELTSDQRELLAALGDLLDTSMRDERVVRIASAACRALGVRPAEPHA*
Ga0062594_1001294292	3300005093	Soil	MIERLTTNLGALARMSPAELATEQGSRVAADCADAIRLELDCPQQELTSDQRELLFALGDLLDTTPLGERVVRLASAACRALGVRPG*
Ga0065712_105223342	3300005290	Miscanthus Rhizosphere	MSPAELATEWGGRVAADCADAIRLELDCPQQELTSDQRELLFALGDLLDTTPLGERVVRLASAACRALGVRPG*
Ga0065715_101478853	3300005293	Miscanthus Rhizosphere	MIERLTTNLGALARLSPAELATERGSRVAADCADAIRLELDCPQQELTSDQRELLAALGDLLDTSTRDERVVRIASAACRALGVRPAEPHA*
Ga0070676_100426015	3300005328	Miscanthus Rhizosphere	MIERLTTNLGALARLSPAELATERGSRVAADCADAIRLELDCPQQELTSDQRELLAALGDLLDTSTRDERVVRIA
Ga0070683_1006757632	3300005329	Corn Rhizosphere	MIERLTTNLGALARLSPAELATERGSRVAADCADAIRLELDCPQQELTSDQRELLAALGDLLDTSTRDERVVRTASAACRALGVRPAEPHA*
Ga0070690_1002656511	3300005330	Switchgrass Rhizosphere	IERLTTNLGALARLSPAELATERGSRVAADCADAIRLELDCPQQELTSDQRELLAALGDLLDTSTRDERVVRIASAACRALGVRPAEPHA*
Ga0070670_1000155313	3300005331	Switchgrass Rhizosphere	MIERLTTNLAALARMSPAELATERGGRVAADCADAIRLELDCPQQELTSDQRELLSALGDLLDTSPRDESAVRLASTACRALGVRRG*
Ga0068869_1003304222	3300005334	Miscanthus Rhizosphere	LIERLTTNLGALARLSPAELATERGSRVAADCADAIRLELDCPQQELTSDQRELLAALGDLLDTSTRDERVVRIASAACRALGVRPAEPHA*
Ga0070666_104153362	3300005335	Switchgrass Rhizosphere	MIERLTTSLGALARLSPAELATERGSRVAADCADAIRLELDCPQQELTSDQRELLAALGDLLDTSTRDERVVRIASAACRALGVRPAEPHA*
Ga0068868_1002302453	3300005338	Miscanthus Rhizosphere	MIERLTTNLGALARLSPAELATEGGSRVAADCADAIRLELDCPQQELTSDQRELLAALGDLLDTSTRDERVVRIASAACRALGVRPAEPHA*
Ga0068868_1019432892	3300005338	Miscanthus Rhizosphere	MIERLTTNLGALARMSPAELATEWGGRVAADCADAIRLELDCPQQELTSDQRELLFALGDLLDTTPLGERVVRLAWAACRALGVRPG*
Ga0070660_1006327212	3300005339	Corn Rhizosphere	MIERLTTNLGALARLSPAELATEGGSRVAADCADAIRLELDCPQQELTSDQRELLAALGDLLDTSTRDERVVRIASAACRALGVRLAEPHA*
Ga0070689_1007015092	3300005340	Switchgrass Rhizosphere	MIERLTTNLGALARMSPAELATEQGSRVAADCADAIRLELDCPQQDLTSDQRELLSALGDLLDTLPHDERVVRVALAACRALGVRKPQA*
Ga0070687_1000047812	3300005343	Switchgrass Rhizosphere	MLERLTTNLGALARLSPAELATERGSRVAADCADAIRLELDCPQQELTSDQRELLAALGDLLDTSMRDERVVRIASAACRALGVRPAEPHA*
Ga0070661_1002180152	3300005344	Corn Rhizosphere	MIERLTTNLAALARMSPAELATARGGRVAADCADAIRLELDCPQQELTSDQRELLSALGDLLDTSPRDESAVRLASTACRALGVRRG*
Ga0070668_1000098555	3300005347	Switchgrass Rhizosphere	LIERLTTNLGALARLSPAELATEGGSRVAADCADAIRLELDCPQQELTSDQRELLAALGDLLDTSTRDERVVRIASAACRALGVRPAEPHA*
Ga0070671_1000680393	3300005355	Switchgrass Rhizosphere	MIERLTINLDALARMSPEELATDRGSRVAADCADAIRLELDCPQQELTSDQREMLSALGDLLDTSPHDAAVGRMASAACRALGRSN*
Ga0070671_1008891881	3300005355	Switchgrass Rhizosphere	MIERLTTNLDALSRLSPPQLATKQGSRVAADCADVIRLELDCPQQDLTSDQRELLSALGDLLDTSPHDERVGRIASAACRALGVRPG*
Ga0070674_1000492633	3300005356	Miscanthus Rhizosphere	MIERLTTNLGALARMSAAELASEQGSRVAADCADAIRLELDCPQQDLTSDQRELLSALGDLLDTLPHDERVVPVALAACRALGGRKPQASRLRTHEPPL*
Ga0070674_1003501001	3300005356	Miscanthus Rhizosphere	MIERLTTNLDALARMSPEELATARGSRVAADCADAIRLELDCPQQELTSDQREMLAALGDLLDTSPRDAAVGRMASAACRALGRSS*
Ga0070673_1007556332	3300005364	Switchgrass Rhizosphere	MIERLTTNLDALARLSPAELATERGSRVAADCADAIRLELDCPQQELTSDQRELLAALGDLLDTSTRDERVVRIASAACRALGVRPAEPHA*
Ga0070673_1010388302	3300005364	Switchgrass Rhizosphere	MIERLTTNLGALARMSPAELATEQGSRVAADCADAIRLELDCPQQDLTLDQRELLSALGDLLDTSPHDERVVRIASAACRALGVRPG*
Ga0070713_1019315431	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MIERLTTNLDALARMSPAELATERGRRVAADCADAIRLELDCPQQDLTSDQRELLSALGDLLDTLAHDERVVGIASAACRVLARSR*
Ga0070710_110379812	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MIERLTTNLDALARMSPAELATERGRRVAADCADAIRLELDCPQQDLTSDQRELLSALGDLLDTLQHDERVVGIASAACRVLARSR*
Ga0070701_101433543	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MIERLTTNLGALARLSPAELATEGGSRVAADCADAIRLELDCPQQELTSDQRELLAALGDLLDTSTRDERVVRTASAACRALGVRPAEPHA*
Ga0070705_1003759163	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	ERLTTNLGALARLSPAELATEGGSRVAADCADAIRLELDCPQQELTSDQRELLAALGDLLDTSTRDERVVRIASAACRALGVRPAEPHA*
Ga0068867_1006949992	3300005459	Miscanthus Rhizosphere	MIERLTTNLAALARMSPAELATARGGRVAADCADAIRLELDCPQQELTSDQRELLSALGDLLNASPRDESTVRLASAACRALGVRRG*
Ga0068867_1009873711	3300005459	Miscanthus Rhizosphere	MIERLTTNLDALSRLSPPQLATKQGSRVAADCADVIRLELDCPQQDLTSDQRELLSALGDLLDTSPHDERVVRIASAACRALGVRPG*
Ga0068867_1010102831	3300005459	Miscanthus Rhizosphere	MIERLTTNLGALARMSAAELASEQGSRVAADCADAIRLELDCPQQDLTSDQRELLSALGDLLDTLPHDERVVPVALAACRALGVRKPQASRLRTHEPPL*
Ga0068867_1024223452	3300005459	Miscanthus Rhizosphere	EERLIERLTTNLGALARLSPAELATEGGSRVAADCADAIRLELDCPQQELTSDQRELLAALGDLLDTSTRDERVVRIASAACRALGVRPAEPHA*
Ga0070695_1003682703	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MIERLTTNLGALARLSPAELATEGGSRVAADCADAIRLELDCPQQELTSDQRELLAALGDLLDTSTRDERVVRIASAACRALAVRPAEPHA*
Ga0070693_1004238173	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	LTTNLGALARLSPAELATEGGSRVAADCADAIRLELDCPQQELTSDQRELLAALGDLLDTSTRDERVVRIASAACRALGVRPAEPHA*
Ga0070664_1000847842	3300005564	Corn Rhizosphere	MIERLTTNLGALARLAPAELATETGSRIAADCADAIRLELDCPQQELTSDQRELLSALGDLLDTSPSDERVVRIASAASRALGRSS*
Ga0068857_1001284963	3300005577	Corn Rhizosphere	MIERLTTSLGALARLSPAELATERGSRVAADCADAIRLELDCPQQELTSDQRELLAALGDLLDASTRDERVVRIASAACRALGVRLAEPHA*
Ga0068854_1018543371	3300005578	Corn Rhizosphere	ESSEERLIERLTTNLGALARLSPAELATEGGSRVAADCADAIRLELDCPQQELTSDQRELLAALGDLLDTSMRDERVVRIASAACRALGVRPAEPHA*
Ga0068856_1015547472	3300005614	Corn Rhizosphere	CGRDAESGPFERGGMIERLTTNLGALARMSPAELATEQGSRVAADCADAIRLELDCPQQEPTSDQRELLFALGDLLDTTPLGERVVRLASAACRALGVRPG*
Ga0068864_1000210445	3300005618	Switchgrass Rhizosphere	MIERLTTNLAALARMSPAELATERGGRVAADCADAIRLELDCPQQELTSDQRELLSALGDLLDTSPRDESAVRLASIACRALGVRRG*
Ga0068866_107683572	3300005718	Miscanthus Rhizosphere	MIERLTTNLDALSRLSPPQLATKQGSRLAADCADVIRLELDCPQQDLTSDQRELLSALGDLLDTSPHDERVGRIASAACRALGVRPG*
Ga0066903_1035102802	3300005764	Tropical Forest Soil	MIERLTTNLGALSRMSLAELATDKGSRVAADCADAIRLELDCPQQDLTSDQRALLSALGDLLETSPRNEEVGALASAVCRALGVRPG*
Ga0068851_100257552	3300005834	Corn Rhizosphere	MIERLTTNLAALARMSPAELATERGGRVAADCADAIRLELDCPQQELTSDQRKLLSALGDLLDTSLRDESAVRLASTACRALGVRRG*
Ga0082029_16705802	3300006169	Termite Nest	MIERLTTNLDALARMSPAELATEQGSRVAAECADAIRLELDCPQQDLTSDQRELLSALGDVLDTSCRDDAVVRLASAACRALGVRP
Ga0097621_1003887463	3300006237	Miscanthus Rhizosphere	MIERLTTNLAALARMSPAELATERGGRVAADCADAIRLELDCPQQELTSDQRELLSALGDLLNASPRDESTVRLASAACRALGVRRG*
Ga0068871_1011733133	3300006358	Miscanthus Rhizosphere	SPAELATERGSRVAADCADAIRLELDCPQQELTSDQRELLAALGDLLDTSTRDERVVRIASAACRALGVRPAEPHA*
Ga0074054_110563572	3300006579	Soil	MIERLTTNLDALARLSPAELGTERGERISADCADAIRLELDCPQQELTSDQRELLSALGDLLDSSSRGEAVVRV
Ga0075421_1021609271	3300006845	Populus Rhizosphere	VSPCGHERLRESSEECMIERLATNLGALARLSPAELATEGGSRVAADCADAIRLELDCPQQELTSDQRELLAALGDLLDTSTRDERVVRIASAACRALGVRPAEPHA*
Ga0075433_107488612	3300006852	Populus Rhizosphere	MIERLTTNLGALARLSPAELATEGGSRVAADCADAIRLELDCPQQELTSDQRGLLAALGDLLDTSTRDERVVRIASAACRALGVRPAEPHA*
Ga0075434_1021066692	3300006871	Populus Rhizosphere	GRERLCESSEERMIERLTTNLGALARLSPAELATEGGSRVAADCADAIRLELDCPQQELTSDQRGLLAALGDLLDTSTRDERVVRIASAACRALGVRPAEPHA*
Ga0111539_101230943	3300009094	Populus Rhizosphere	ARLSPAELATETGSRIAADCADAIRLELDCPQQELTSDQRELLSALGDLLDTSPHDEMVVRIASAASSALGRSS*
Ga0111539_101386221	3300009094	Populus Rhizosphere	MIERLTTNLDALARLSPAELATETGSRIAADCADAIRLELDCPQQELTSDQRELLSALGDLLDTSPHDEMVVRIASAASSALGRSS*
Ga0105243_115550562	3300009148	Miscanthus Rhizosphere	SPAELATEWGGRVAADCADAIRLELDCPQQELTSDQRELLAALGDLLDTSTRDERVVRIASAACRALGVRPAEPHA*
Ga0105242_104073792	3300009176	Miscanthus Rhizosphere	MIERLTTNLDALARMSPEELATVRGSRVAADCADAIRLELDCPQQELTSDQREMLAALGDLLDMSPRDAAVGRMASAACRALGRSS*
Ga0105249_100025517	3300009553	Switchgrass Rhizosphere	LIERLTTNLGALARLSPAELATEGGSRVAADCADAIRLELDCPQQELTSDQRELLAALGDLLDTSTPDERVVRIASAACRALGVRPAEPHA*
Ga0126383_114681902	3300010398	Tropical Forest Soil	MIERLTTNLGALSRMSLAELATDKGSRVAADCADAIRLELDCPHQDLTSDQRALLSALGDLLETSPRNEEVGALASAVCRALGVRPG*
Ga0157355_10189692	3300012493	Unplanted Soil	MIERLTTNLGALARLSPAELATEGGSRVVADCADAIRLELDCPQQELTSDQRELLAALGDLLDTSTRDERVVRIASAACRALGVRPAEPHA*
Ga0157334_10133431	3300012509	Soil	NLGALARLSPAELATERGSRVAADCADAIRLELDCPQQELTSDQRELLAALGDLLDTSTRDERVVRIASAACRALGVRPAEPHA*
Ga0157330_10250292	3300012514	Soil	MIERLTTNLGALARLSPAELATERGSRVAADCADAIRLELDCPQQELTADQRELLAALGDLLDTSTRDERVVRIASAACRALGVRPAEPHA*
Ga0164303_108699092	3300012957	Soil	MIERLTTNLDALSRLSPPQLATKQGSRVAADCADVIRLELDCPQQDLTSDQRELLSALGDLLDTSPHDERVVRIASAACRALG
Ga0164303_111292341	3300012957	Soil	MIERLTTNLDALARLSPAELGTERGARVAADCADAIRLELDCPQQELTSDQREVLSALGDLLDASSRDEAVVRVASAACRALGVR
Ga0164299_111290211	3300012958	Soil	MIERLTTTLDALSRLSPPQLATKQGSRVAADCADVIRLELDCPQQDLTSDQRELLSALGDLLDTSPHDERVVRIASAACRALGVRPG*
Ga0164301_118140391	3300012960	Soil	MIERLTTNLDALSRLSAPQLATKQGSRVAADCADVIRLELDCPQQDLTSDQRELLSALGDLLDTSPHDERVVRIASAACRALGVRPG*
Ga0164304_105498081	3300012986	Soil	MIERLTTNLGALARMSAAELATEQGSRVTADCADAIRLELDCPQQDLTSDQRELLSALGDLLDTLPHDERVVPVALAACRALGGRKPQASRLRTHEPPL*
Ga0164307_102134242	3300012987	Soil	MIERLTTNLGALARMSAAELATEQGSRVAADCADAIRLELDCPQQDLTSDQRELLSALGDLLDTLPHDERVVPVALAACRALGVRKPQASRLPTHEPPS*
Ga0164306_109622242	3300012988	Soil	MIERLTTNLDALSRLSPPQLATKQGSRVAADCADVIRLELDCPQQDLTSDQRELLSALGDLLDTLPRDERIVPVALAACRGLGVRKPQALRLRTDEPPL*
Ga0157374_103530662	3300013296	Miscanthus Rhizosphere	MIERLTTNLGALARMSPAELATEWGGRVAADCADAIRLELDCPQQELTSDQRELLSALGDLLDTSPRDESAVRLASTACRALGVRRG*
Ga0157378_103885364	3300013297	Miscanthus Rhizosphere	MIERLTTNLDALSRLSPPQLATKQGSRVAADCADAIRLELDCPQQDLTSDQRELLSALGDLLDTSPHDERVVRIASAACRALGVRPG*
Ga0163162_100157948	3300013306	Switchgrass Rhizosphere	LIERLTTNLGALARLSPAELATEGGSRVAADCADAIRLELDCPQQELTSDQRELLAALGDLLDTSTRDERVVRIAAAACRALGVRPAEPHA*
Ga0163162_100731182	3300013306	Switchgrass Rhizosphere	MIERLTTNLGALARLSPAELATERGSRVAADCADAIRLELDRPQQELTSDQRELLAALGDLLDTSMRDERVVRIASAACRALGVRPAEPHA*
Ga0157372_103227592	3300013307	Corn Rhizosphere	LIERLTTNLGALARLSPAELATERGSRVAADCADAIRLELDCPQQELTSDQRELLAALGDLLDTSMRDERVVRIASAACRALGVRPAEPHA*
Ga0157375_100933182	3300013308	Miscanthus Rhizosphere	MCACVFVTALSMREPRGACGRERLCESSEERMIERLTTNLGALARLSPAELATEGGSRVAADCADAIRLELDCPQQELTSDQRELLAALGDLLDTSTRDERVVRIASAACRALGVRPAEPHA*
Ga0163163_101082903	3300014325	Switchgrass Rhizosphere	MIERLTTNLAALARMSPAELATERGGRVAADCADAIRLELDCPQQELTSDQRKLLSALGDLLDTSPRDESAVRLASTACRALGVQRG*
Ga0157376_116173632	3300014969	Miscanthus Rhizosphere	TTNLDALARLSPAELATERGSRVAADCADAIRLELDCPQQELTSDQRELLAALGDLLDTSTRDERVVRIASAACRALGVRPAEPHA*
Ga0182005_11684671	3300015265	Rhizosphere	MIERLTTNLAALARMSPAELATERGGRVAADCADAIRLELDCPQQELTSDQRELLSALGDLLDTSPRDESAVRLASTACRALGV
Ga0132258_101765444	3300015371	Arabidopsis Rhizosphere	MIERLTTSLDVLARMSPAELATERGSRVAADCADAIRLELDCPQQELTRDQRELLSALGDLLDTSRRDEAVVRLASAACWALGVRPG*
Ga0132258_104116633	3300015371	Arabidopsis Rhizosphere	MIERLTTNLDALARLSPAELTTERGSRIAADCADAIRLELDCQQQELTSDQRELLSALGDLLDTSPHDEMVVRIASAASRALGRSS*
Ga0132257_1005477321	3300015373	Arabidopsis Rhizosphere	MIERLTTSLDVLARMSPAELATERGSRVAADCADAIRLELDCPQQELTRDQRELLSALGDLLDTSRRDEAVVRL
Ga0182009_101781201	3300021445	Soil	MIERLTTNLAALARMSPAELATERGGRVAADCADAIRLELDCPQQELTSDQRELLSALGDLLDTSPRDESAVRLASTACRALGVRRG
Ga0207697_100109541	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MIERLTTNLGALARLSPAELATERGSRVAADCADAIRLELDRPQQELTSDQRELLAALGDLLDTSTRDERVVRIASAACRALGVRPAEPHA
Ga0207656_100349683	3300025321	Corn Rhizosphere	MIERLTTNLAALARMSPAELATERGGRVAADCADAIRVELDCPQQELTSDQRELLFALGDLLDTTPLGERVVRLASAACRALGVRPG
Ga0207642_110427201	3300025899	Miscanthus Rhizosphere	MIERLTTNLDALARMSPEELATARGSRVAADCADAIRLELDCPQQELTSDQREMLAALGDLLDTSPRDAAVGRMASAACRALGRSS
Ga0207688_100148572	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	LIERLTTNLGALARLSPAELATEGGSRVAADCADAIRLELDCPQQELTSDQRELLAALGDLLDTSMRDERVVRIASAACRALGVRPAEPHA
Ga0207680_102086092	3300025903	Switchgrass Rhizosphere	MIERLTTSLGALARLSPAELATERGSRVAADCADAIRLELDCPQQELTSDQRELLAALGDLLDTSTRDERVVRTASAACRALGVRP
Ga0207645_1000217510	3300025907	Miscanthus Rhizosphere	MIERLTTNLGALARLSPAELATERGSRVAADCADAIRLELDCPQQELTSDQRELLAALGDLLDTSTRDERVVRIASAACRALGVRPAEPHA
Ga0207705_108808411	3300025909	Corn Rhizosphere	MIERLTTNLGALARMSPAELATEWGGRVAADCADAIRLELDCPQQELTSDQRELLFALGDLLDTTPLGERVVRLASAACRALGVRPG
Ga0207657_102295113	3300025919	Corn Rhizosphere	LIERLTTNLGALARLSPAELATEGGSRVAADCADAIRLELDCPQQELTSDQRELLAALGDLLDTSTRDERVVRIASAACRALGVRPAEPHA
Ga0207681_100614443	3300025923	Switchgrass Rhizosphere	MIERLTTNLGALARLSPAELATEGGSRVAADCADAIRLELDCPQQELTSDQRELLAALGDLLDTSTRDERVVRIASAACRALGVRPAEPHA
Ga0207659_106570492	3300025926	Miscanthus Rhizosphere	MIERLTTNLGALARLSRAELATERGSRVAADCADAIRLELDCPQQELTSDQRELLAALGDLLDTSTRDERVVRIASAACRALGVRPAEPHA
Ga0207687_102257534	3300025927	Miscanthus Rhizosphere	LIERLTTNLGALARLSPAELATERGSRVAADCADAIRLELDCPQQELTSDQRELLAALGDLLDTSTRDERVVRIASAACRALGVRPAEPHA
Ga0207644_111076952	3300025931	Switchgrass Rhizosphere	MIERLTTNLDALSRLSPPQLATKQGSRVAADCADVIRLELDCPQQDLTSDQRELLSALGDLLDTSPHDERVVRIAS
Ga0207644_113911951	3300025931	Switchgrass Rhizosphere	MIERLTINLDALARMSPEELATDRGSRVAADCADAIRLELDCPQQELTSDQREMLSALGDLLDTSPHDAAVGRMASAACRAL
Ga0207690_101641551	3300025932	Corn Rhizosphere	MIERLTTNLGALARLSRAELATERGSRVAADCADAIRLELDCPQQELTSDQRELLAALGDLLDTSTRDERVVRTASAACRALGVRPAEPHA
Ga0207706_105003083	3300025933	Corn Rhizosphere	MIERLTTNLGALARMSPAELATEWGGRVAADCADAIRLELDCPQQDLTSDQRELLSALGDLLDTLPHDERVVRVALAACRALGVRKPQA
Ga0207686_103392753	3300025934	Miscanthus Rhizosphere	MIERLTTNLGALARMSAAELASEQGSRVAADCADAIRLELDCPQQDLTSDQRELLSALGDLLDTLPHDERVV
Ga0207686_104581252	3300025934	Miscanthus Rhizosphere	MIERLTTNLDALSRLSPPQLATKQGSRVAADCADVIRLELDCPQQDLTSDQRELLSALGDLLDTSPHDERVGRIASAACRALGVRPG
Ga0207686_114894272	3300025934	Miscanthus Rhizosphere	MIERLTTNLAALARMSPAELATERGGRVAADCADAIRLELDCPQQELTSDQRELLSALGDLLNASPRDESTVRLASAACRALGVRRG
Ga0207670_107753391	3300025936	Switchgrass Rhizosphere	MIERLTTNLGALARMSPAELATEQGSRVAADCADAIRLELDCPQQDLTSDQRELLSALGDLLDTLPHDERVVRVALAACRALGVRKPQA
Ga0207711_101386361	3300025941	Switchgrass Rhizosphere	MIERLTTNLGALARLSPAELATERGSRVAADCADAIRLELDCPQQELTSDQRELLAALGDLLDTSTRDERVVRTASA
Ga0207661_103051832	3300025944	Corn Rhizosphere	MIERLTTNLGALARLSPAELATERGSRVAADCADAIRLELDCPQQELTSDQRELLSALGDLLDTSPSDERVVRIASAASRALGRSS
Ga0207679_100709822	3300025945	Corn Rhizosphere	MIERLTTNLGALARLAPAELATETGSRIAADCADAIRLELDCPQQELTSDQRELLSALGDLLDTSPSDERVVRIASAASRALGRSS
Ga0207651_101041053	3300025960	Switchgrass Rhizosphere	VALMCACVFVTALSMREPRGACGRERLCESSEERMIERLTTNLGALARLSPAELATEGGSRVAADCADAIRLELDCPQQELTSDQRELLAALGDLLDTSTRDERVVRIASAACRALGVRPAEPHA
Ga0207658_120600851	3300025986	Switchgrass Rhizosphere	PVVRSSPRSRCASRGVSPCGRDAESGPFERGGMIERLTTNLGALARMSPAELATEQGSRVAADCADAIRLELDCPQQDLTSDQRELLSALGDLLDTLPHDERVVRVALAACRALGVRKPQ
Ga0207677_119941592	3300026023	Miscanthus Rhizosphere	MIERLTTNLGALARMSPAELATEWGGRVAADCADAIRLELDCPQQELTSDQRELLFALGDLLDTTPLGERVVRLAWAACRALGVRPG
Ga0207708_101813013	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MIERLTTNLGALARLSPAELATERGSRVAADCADAIRLELDCPQQELTSDQRELLAALGDLLDTSTRDERVVRIASAACRALGVRLAEPHA
Ga0207702_106359331	3300026078	Corn Rhizosphere	ERLTTNLGALARMSPAELATEWGGRVAADCADAIRLELDCPQQELTSDQRELLFALGDLLDTTPLGERVVRLASAACRALGVRPG
Ga0207641_109147903	3300026088	Switchgrass Rhizosphere	MIERLTTNLGALARLSPAELATERGGRVAADCADAIRLELDCPQQELTSDQRELLAALGDLLDTSTRDERVVRIASAACRALGVRLAEPHA
Ga0207648_100678152	3300026089	Miscanthus Rhizosphere	MIERLTTNLGALARMSAAELASEQGTRVAADCADAIRLELDCPQQDLTSDQRELLSALGDLLDTLPHDERVVPVALAACRALGVRKPQASRLRTHEPPL
Ga0207648_108620391	3300026089	Miscanthus Rhizosphere	MIERLTTNLDALSRLSPPQLATKQGSRLAADCADVIRLELDCPQQDLTSDQRELLSALGDLLDTSPHDERVVRIASAACRALGVRPG
Ga0207676_100387803	3300026095	Switchgrass Rhizosphere	MIERLTTNLAALARMSPAELATERGGRVAADCADAIRLELDCPQQELTSDQRELLSALGDLLDTSPRDESAVRLASIACRALGVRRG
Ga0207674_101095363	3300026116	Corn Rhizosphere	MIERLTTNLGALARLSPAELATERGSRVAADCADAIRLELDCPQQELTSDQRELLAALGDLLDTSTRDERVVR
Ga0207675_10000382212	3300026118	Switchgrass Rhizosphere	MIERLTTNLGALARLSPAELATERGSRVAADCADAIRLELDRPQQELTSDQRELLAALGDLLDTSMRDERVVRIASAACRALGVRPAEPHA
Ga0208890_10428881	3300027523	Soil	MIERLTTNLDALARLSPAELGTERGERISADCADAIRLELDCPQQELTSDQRQLLSALGDVLDASSRGEDVVRMA
Ga0207428_100613492	3300027907	Populus Rhizosphere	MIERLTTNLDALARLSPAELATETGSRIAADCADAIRLELDCPQQELTSDQRELLSALGDLLDTSPHDEMVVRIASAASSALGRSS
Ga0268266_110274742	3300028379	Switchgrass Rhizosphere	MIERLTTNLAALARMSPAELATERGGRVAADCADAIRLELDCPQQELTSDQRKLLSALGDLLDTSPRDESAVRLASTACRALGVQRG
Ga0307506_102020541	3300031366	Soil	MIERLTTNLDALARLSPAELGTERGARVAADCADAIRLELDCPQQELTSDQRELLSALGDLLDASSRGEAVVRVASAA
Ga0308175_1000335325	3300031938	Soil	MIERLTTNLGALARMSPAELATEPGARVAADCADAIRLELDCPQQELTSDQRELLSALGDLLDTSPRDESVVRLASAVCGSLGVRPHL
Ga0310901_100750512	3300031940	Soil	MIERLTTNLGALARLSPAELATERGGRVAADCADAIRLELDCPQQELTSDQRELLAALGDLLDTSTRDERVVRIASAACRALGVRPAEPHA
Ga0310890_103351611	3300032075	Soil	TTNLGALARLSPAELATERGGRVAADCADAIRLELDCPQQELTSDQRELLAALGDLLDTSTRDERVVRIASAACRALGVRPAEPHA
Ga0310810_100639423	3300033412	Soil	MIERLTTNLAALARMSPAELATERGGRVAADCADAIRLELDCPQQELTSDQRKLLSALGDLLDTSPRDESAVRLASTACRALGVRRG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069307

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences