Metagenome / Metatranscriptome Family F069290

Basic Information
Family ID	F069290
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	66 residues
Representative Sequence	IDERRAANSRTRTRTSIPEASMRLDISVLEPPQDAERAIYVSPDYVLPEVLARVSARLTGS
Number of Associated Samples	121
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.46 %
% of genes near scaffold ends (potentially truncated)	95.16 %
% of genes from short scaffolds (< 2000 bps)	91.13 %
Associated GOLD sequencing projects	113
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Most Common Taxonomy
Group	Bacteria (91.129 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (20.968 % of family members)
Environment Ontology (ENVO)	Unclassified (31.452 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (36.290 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 31.46% β-sheet: 0.00% Coil/Unstructured: 68.54%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF07366	SnoaL	27.42
PF02698	DUF218	20.16
PF00196	GerE	8.06
PF09859	Oxygenase-NA	4.03
PF03358	FMN_red	3.23
PF02870	Methyltransf_1N	2.42
PF03729	DUF308	1.61
PF00588	SpoU_methylase	1.61
PF00723	Glyco_hydro_15	0.81
PF10604	Polyketide_cyc2	0.81
PF00733	Asn_synthase	0.81
PF02146	SIR2	0.81
PF04672	Methyltransf_19	0.81
PF05506	PLipase_C_C	0.81
PF13673	Acetyltransf_10	0.81
PF13671	AAA_33	0.81
PF00144	Beta-lactamase	0.81
PF00355	Rieske	0.81
PF01243	Putative_PNPOx	0.81
PF04542	Sigma70_r2	0.81
PF00903	Glyoxalase	0.81
PF00107	ADH_zinc_N	0.81
PF08281	Sigma70_r4_2	0.81
PF13847	Methyltransf_31	0.81
PF13561	adh_short_C2	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG1434	Lipid carrier protein ElyC involved in cell wall biogenesis, DUF218 family	Cell wall/membrane/envelope biogenesis [M]	20.16
COG2949	Uncharacterized periplasmic protein SanA, affects membrane permeability for vancomycin	Cell wall/membrane/envelope biogenesis [M]	20.16
COG0350	DNA repair enzyme Ada (O6-methylguanine-DNA--protein-cysteine methyltransferase)	Replication, recombination and repair [L]	2.42
COG0565	tRNA C32,U32 (ribose-2'-O)-methylase TrmJ or a related methyltransferase	Translation, ribosomal structure and biogenesis [J]	1.61
COG0566	tRNA G18 (ribose-2'-O)-methylase SpoU	Translation, ribosomal structure and biogenesis [J]	1.61
COG0219	tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain	Translation, ribosomal structure and biogenesis [J]	1.61
COG3247	Acid resistance membrane protein HdeD, DUF308 family	General function prediction only [R]	1.61
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.81
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	0.81
COG3387	Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family	Carbohydrate transport and metabolism [G]	0.81
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.81
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.81
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.81
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.81
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.81
COG0846	NAD-dependent protein deacetylase, SIR2 family	Posttranslational modification, protein turnover, chaperones [O]	0.81
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.13 %
Unclassified	root	N/A	8.87 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.13 %
Unclassified	root	N/A	8.87 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.13 %
Unclassified	root	N/A	8.87 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	79.03 %
Unclassified	root	N/A	8.87 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	3.23 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.42 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	79.03 %
Unclassified	root	N/A	8.87 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	3.23 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.42 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	70.97 %
Unclassified	root	N/A	8.87 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	3.23 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.61 %

Name	Rank	Taxonomy	Distribution
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	18.55 %
Unclassified	root	N/A	8.87 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.23 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	3.23 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	3.23 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.61 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.81 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.81 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.81 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.81 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.81 %

Name	Rank	Taxonomy	Distribution
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	9.68 %
Unclassified	root	N/A	8.87 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	4.84 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	4.03 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.23 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.23 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	3.23 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.61 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.81 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.81 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.81 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.81 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	9.68 %
Unclassified	root	N/A	8.87 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	4.84 %
Nonomuraea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea	4.03 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.23 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.23 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	3.23 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.61 %
Nocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia	0.81 %
Actinoplanes	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes	0.81 %
Lentzea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Lentzea	0.81 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.81 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	9.68 %
Unclassified	root	N/A	8.87 %
Nonomuraea basaltis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea basaltis	4.03 %
Actinomadura rupiterrae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura rupiterrae	4.03 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.23 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.23 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	3.23 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.61 %
Actinoplanes brasiliensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes brasiliensis	0.81 %
unclassified Actinomadura	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura	0.81 %
Nocardia seriolae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia seriolae	0.81 %
Lentzea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Lentzea	0.81 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.81 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	9.68 %
Unclassified	root	N/A	8.87 %
Nonomuraea basaltis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea basaltis	4.03 %
Actinomadura rupiterrae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura rupiterrae	4.03 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.23 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3.23 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	3.23 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.61 %
Actinomadura sp. CNU-125	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura → Actinomadura sp. CNU-125	0.81 %
Actinoplanes brasiliensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes brasiliensis	0.81 %
Nocardia seriolae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia seriolae	0.81 %
Lentzea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Lentzea	0.81 %
Burkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	0.81 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.81 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2070309009\|GPKNP_GG3DY5402I349S	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	526	Open in IMG/M
2189573001\|GZR05M102JCTDN	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura rupiterrae	508	Open in IMG/M
3300000956\|JGI10216J12902_101930223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	602	Open in IMG/M
3300005146\|Ga0066817_1010752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura rupiterrae	730	Open in IMG/M
3300005174\|Ga0066680_10558364	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	719	Open in IMG/M
3300005179\|Ga0066684_11064488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	519	Open in IMG/M
3300005186\|Ga0066676_10914321	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	588	Open in IMG/M
3300005332\|Ga0066388_107731508	Not Available	538	Open in IMG/M
3300005337\|Ga0070682_100207520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1386	Open in IMG/M
3300005344\|Ga0070661_100401636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1084	Open in IMG/M
3300005355\|Ga0070671_101797895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	544	Open in IMG/M
3300005406\|Ga0070703_10408755	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura rupiterrae	593	Open in IMG/M
3300005434\|Ga0070709_10936298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	687	Open in IMG/M
3300005435\|Ga0070714_101020102	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	805	Open in IMG/M
3300005436\|Ga0070713_102158336	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	540	Open in IMG/M
3300005437\|Ga0070710_10081161	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1893	Open in IMG/M
3300005437\|Ga0070710_10176306	All Organisms → cellular organisms → Bacteria	1335	Open in IMG/M
3300005518\|Ga0070699_101251406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	681	Open in IMG/M
3300005549\|Ga0070704_101156374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	704	Open in IMG/M
3300005614\|Ga0068856_101768967	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	630	Open in IMG/M
3300006172\|Ga0075018_10440151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	670	Open in IMG/M
3300006175\|Ga0070712_101704607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	552	Open in IMG/M
3300006176\|Ga0070765_101120243	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300006237\|Ga0097621_100125350	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2181	Open in IMG/M
3300006581\|Ga0074048_12588011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura rupiterrae	1066	Open in IMG/M
3300006604\|Ga0074060_11841674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	916	Open in IMG/M
3300006605\|Ga0074057_10011449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1059	Open in IMG/M
3300006797\|Ga0066659_10518003	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	959	Open in IMG/M
3300006806\|Ga0079220_10621292	Not Available	773	Open in IMG/M
3300006871\|Ga0075434_100488931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1251	Open in IMG/M
3300006914\|Ga0075436_101006205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	626	Open in IMG/M
3300007265\|Ga0099794_10076020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1651	Open in IMG/M
3300007788\|Ga0099795_10238525	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	780	Open in IMG/M
3300009101\|Ga0105247_10215020	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1298	Open in IMG/M
3300009137\|Ga0066709_102760948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	653	Open in IMG/M
3300009143\|Ga0099792_10207607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1118	Open in IMG/M
3300009623\|Ga0116133_1211691	Not Available	524	Open in IMG/M
3300010323\|Ga0134086_10464744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	519	Open in IMG/M
3300010376\|Ga0126381_104388353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300010396\|Ga0134126_11370041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	782	Open in IMG/M
3300010397\|Ga0134124_11325277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	744	Open in IMG/M
3300010399\|Ga0134127_10280597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1594	Open in IMG/M
3300011107\|Ga0151490_1312209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura rupiterrae	835	Open in IMG/M
3300011119\|Ga0105246_12383393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	519	Open in IMG/M
3300012189\|Ga0137388_11934557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	519	Open in IMG/M
3300012198\|Ga0137364_10435667	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	983	Open in IMG/M
3300012199\|Ga0137383_10060361	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2722	Open in IMG/M
3300012207\|Ga0137381_11609560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	540	Open in IMG/M
3300012210\|Ga0137378_11260502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	656	Open in IMG/M
3300012351\|Ga0137386_10947608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	615	Open in IMG/M
3300012357\|Ga0137384_10420935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1101	Open in IMG/M
3300012490\|Ga0157322_1037780	All Organisms → cellular organisms → Bacteria	543	Open in IMG/M
3300012929\|Ga0137404_11308065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	668	Open in IMG/M
3300012930\|Ga0137407_10083654	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2695	Open in IMG/M
3300012951\|Ga0164300_10102106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1261	Open in IMG/M
3300012986\|Ga0164304_11701281	All Organisms → cellular organisms → Bacteria	527	Open in IMG/M
3300012989\|Ga0164305_11766933	Not Available	557	Open in IMG/M
3300014154\|Ga0134075_10461998	Not Available	565	Open in IMG/M
3300014325\|Ga0163163_10098887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2939	Open in IMG/M
3300015372\|Ga0132256_102154655	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	662	Open in IMG/M
3300015374\|Ga0132255_102557403	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	780	Open in IMG/M
3300016404\|Ga0182037_12017353	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	518	Open in IMG/M
3300016422\|Ga0182039_11943481	Not Available	541	Open in IMG/M
3300018058\|Ga0187766_10462790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura → Actinomadura sp. CNU-125	848	Open in IMG/M
3300018468\|Ga0066662_11123079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	788	Open in IMG/M
3300018482\|Ga0066669_11091485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	720	Open in IMG/M
3300020004\|Ga0193755_1109225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	870	Open in IMG/M
3300021344\|Ga0193719_10397295	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300021432\|Ga0210384_10098659	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2621	Open in IMG/M
3300021560\|Ga0126371_11274689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	869	Open in IMG/M
3300024251\|Ga0247679_1066051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	606	Open in IMG/M
3300024290\|Ga0247667_1034393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	962	Open in IMG/M
3300025898\|Ga0207692_11026180	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	545	Open in IMG/M
3300025903\|Ga0207680_10380560	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	995	Open in IMG/M
3300025906\|Ga0207699_11059479	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	600	Open in IMG/M
3300025911\|Ga0207654_10524928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	839	Open in IMG/M
3300025915\|Ga0207693_10995478	Not Available	640	Open in IMG/M
3300025918\|Ga0207662_10027701	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3271	Open in IMG/M
3300025928\|Ga0207700_11977370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	510	Open in IMG/M
3300025945\|Ga0207679_12153411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	506	Open in IMG/M
3300026035\|Ga0207703_11883348	All Organisms → cellular organisms → Bacteria	574	Open in IMG/M
3300026078\|Ga0207702_11925121	Not Available	582	Open in IMG/M
3300026374\|Ga0257146_1081635	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	528	Open in IMG/M
3300026507\|Ga0257165_1042820	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	807	Open in IMG/M
3300026899\|Ga0209326_1000266	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4221	Open in IMG/M
3300026911\|Ga0209620_1009013	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	817	Open in IMG/M
3300027725\|Ga0209178_1086507	All Organisms → cellular organisms → Bacteria	1035	Open in IMG/M
3300027775\|Ga0209177_10401025	Not Available	550	Open in IMG/M
3300028787\|Ga0307323_10017730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2414	Open in IMG/M
3300028811\|Ga0307292_10265456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	715	Open in IMG/M
3300028906\|Ga0308309_10443442	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1118	Open in IMG/M
3300031668\|Ga0318542_10626029	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	562	Open in IMG/M
3300031715\|Ga0307476_11356528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	518	Open in IMG/M
3300031716\|Ga0310813_11199316	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	699	Open in IMG/M
3300031751\|Ga0318494_10097979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1613	Open in IMG/M
3300031751\|Ga0318494_10471918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea basaltis	730	Open in IMG/M
3300031771\|Ga0318546_10630339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	754	Open in IMG/M
3300031778\|Ga0318498_10181809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	955	Open in IMG/M
3300031779\|Ga0318566_10215406	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae → Nocardia → Nocardia seriolae	953	Open in IMG/M
3300031781\|Ga0318547_10742271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	611	Open in IMG/M
3300031782\|Ga0318552_10472857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	640	Open in IMG/M
3300031796\|Ga0318576_10475150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	590	Open in IMG/M
3300031819\|Ga0318568_10088307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1844	Open in IMG/M
3300031859\|Ga0318527_10045389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia	1695	Open in IMG/M
3300031893\|Ga0318536_10243471	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	914	Open in IMG/M
3300031939\|Ga0308174_10595481	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	914	Open in IMG/M
3300032001\|Ga0306922_10668603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea basaltis	1095	Open in IMG/M
3300032008\|Ga0318562_10164417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1281	Open in IMG/M
3300032009\|Ga0318563_10809221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea basaltis	502	Open in IMG/M
3300032059\|Ga0318533_10357355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea basaltis	1064	Open in IMG/M
3300032063\|Ga0318504_10614574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Nonomuraea → Nonomuraea basaltis	522	Open in IMG/M
3300032064\|Ga0318510_10434391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	562	Open in IMG/M
3300032067\|Ga0318524_10253188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	906	Open in IMG/M
3300032068\|Ga0318553_10418643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Lentzea	701	Open in IMG/M
3300032205\|Ga0307472_101062603	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	763	Open in IMG/M
3300032770\|Ga0335085_11524586	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Actinoplanes → Actinoplanes brasiliensis	695	Open in IMG/M
3300032805\|Ga0335078_11558429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	734	Open in IMG/M
3300032829\|Ga0335070_10997340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	773	Open in IMG/M
3300032898\|Ga0335072_11512397	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	572	Open in IMG/M
3300032954\|Ga0335083_10091339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3032	Open in IMG/M
3300032954\|Ga0335083_10219978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1721	Open in IMG/M
3300033290\|Ga0318519_10130553	All Organisms → cellular organisms → Bacteria	1386	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	85.48%
Host-Associated	Host-Associated	14.52%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.87%
Plants	Host-Associated → Plants	14.52%
Aquatic	Environmental → Aquatic	1.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	83.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.87%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.03%
Roots	Host-Associated → Plants → Roots	1.61%
Freshwater	Environmental → Aquatic → Freshwater	0.81%
Sediment	Environmental → Aquatic → Sediment	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.10%
Loam	Environmental → Terrestrial → Soil → Loam	16.13%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.65%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.84%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.03%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.23%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.61%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.61%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	25.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.10%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.26%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.23%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.42%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.61%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.81%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	20.97%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.84%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.03%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.42%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.61%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.61%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.61%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.61%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.81%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.81%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.81%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.81%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.81%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.81%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2070309009	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
2189573001	Grass soil microbial communities from Rothamsted Park, UK - FD2 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300005146	Soil and rhizosphere microbial communities from Laval, Canada - mgHAB	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006605	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012490	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.4.old.040610	Host-Associated	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024251	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK20	Environmental	Open in IMG/M
3300024290	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK08	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026374	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-A	Environmental	Open in IMG/M
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental	Open in IMG/M
3300026899	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300026911	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM1H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300028787	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032008	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f18	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069290

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
GPKNP_02535700	2070309009	Soil	TRRRASIPEASMRLDISVFEPPQDAERAIYVSPDYVLADVLARVNARLTGS
FD2_06339210	2189573001	Grass Soil	IDERRAANSRTRARTSIPEASMRLDISVLEPPQDAERAIYVSPDYVLPDVLARVSARLSG
JGI10216J12902_1019302231	3300000956	Soil	RARTSVPDAKMRLDTSLLEPPEETERALYVSPDYVLPEVLARVSARLAQN*
Ga0066817_10107522	3300005146	Soil	VYLDTPLPVIAERRAANSRTRARTSIPEADMRLDASLLEPPQEAERAIYVSPDYVLADVLARVSARLTGR*
Ga0066680_105583641	3300005174	Soil	TPLSVIDERRAANSRTRARTSVPEGNMRQDISVFEPPEPAERAVYVSPDYVLSEVLARISARLKRS*
Ga0066684_110644882	3300005179	Soil	RRAANSRTRTRISIPEAKMRLDITLLEPPEDAERAIYVSPDYVLPEVLARISARLTGS*
Ga0066676_109143212	3300005186	Soil	DTPVSVIDQRRAANSRRRASVPEAKMRLDISLLDPPEEAERAIYVSPDYVLPEVLARVGARITGS*
Ga0066388_1077315081	3300005332	Tropical Forest Soil	SVIDERRAANSRTRARTSVPEGKMRLDISLLEPPEEAERAIYVSPDYVLPEVLARVSARLTGR*
Ga0070682_1002075203	3300005337	Corn Rhizosphere	ERRAANSGTRKRASIPEASMRFDISVLEPPQEAERAIYVSPDYVLADVLARVSARLTGR*
Ga0070661_1004016361	3300005344	Corn Rhizosphere	VLVYLDTPLPVIDERRAANSGTRRRASIPEASMRFDISVLEPPQEAERAIYVSPDYVLADVLARVSARLTGR*
Ga0070671_1017978952	3300005355	Switchgrass Rhizosphere	LPVIDERRAANSGTRKRASIPEASMRFDISVLEPPQDAERAIYVSPDYVLADVLARVSARVTGR*
Ga0070703_104087551	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	VAEAHWAGLVLVYLDTPLPVIDERRAANSGTRKRASIPEASMRFDISVLEPPQDAERAIYVSPDYVLADVLARVNARLTGS*
Ga0070709_109362981	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	ERRAANSRTRARTSVPEGNMRQDISVFEPPEPAERAVYVSPDYVLSEVLARISARLAGS*
Ga0070714_1010201022	3300005435	Agricultural Soil	AHWADLVLVYLDTPLPVIDERRAANSGTRKRASIPEASMRLDISVLEPPQDAERAIYVSPDYVLADVLARVNARLTGS*
Ga0070713_1021583362	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VIEERRAANSRTRARTSVPDAKIRTDMSLLEPPEEAEQAIRVSPGYVLPEVLAQVSARLSGR*
Ga0070710_100811611	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VLVYLDTPLSVIDERRAANSRTRARTSVPEGNMRKDISVFEPPEPAERAVYVSPDYVLPEVLARISARLKRS*
Ga0070710_101763061	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VAKAHWAELVLVYLDTPLPVIEERRAANSRTRARTSVPEGNMRQDISVFEPPEPAERAVYVSPDYVLSEVLARISARLAGS*
Ga0070699_1012514061	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	GQRRAANSRTRARTSVPDAKMRLDTSALEPPEKAERALYVSPDYVLPEVLARVSARLTQS
Ga0070704_1011563741	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VAEAHWADLVLVYLDTPLPVIDERRAANSGTRKRASIPEASMRFDISVLEPPQDAERAIYVSPDYVLADVLARVSARLTGR*
Ga0068856_1017689672	3300005614	Corn Rhizosphere	LVLVYLDTPLSVIDERRAANSRTRARTSVPEGNMRKDISVFEPPEPAERAVYVSPDYVLPEVLARISARLKRS*
Ga0075018_104401511	3300006172	Watersheds	VYLDTPLSVIDERRAANSRTRARTSVPEGNMRQDISVFEPPEPAEQAVYVSPDYVLSEVLARISARLTGS*
Ga0070712_1017046072	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	VIDERRAANSRTRARTSVPEGNMRQDISVFEPPEPVERAVYVSPDYVLSDVLARIRARFERS*
Ga0070765_1011202432	3300006176	Soil	AKAHWAELVLVYLDTPLPVIEERRAANSRTRARTSVPEGNMRQDISIFEPPEPAERAVYVSPDYVLSEVLARISARLTRS*
Ga0097621_1001253501	3300006237	Miscanthus Rhizosphere	ANSGTRKRASIPEASMRFDISVLEPPQEAERAIYVSPDYVLADVLARVSARLTGR*
Ga0074048_125880112	3300006581	Soil	DLVLVYLDTPLPVIEERRAANSGTRRRTSIPEADMRLDASLLEPPQEAERAIYVSPDYVLPEVLARVSARLTGS*
Ga0074060_118416742	3300006604	Soil	LLGILVYLDTPLPVIEERRAANSGTRRRTSIPEADMRLDVSLLEPPQDAERAIYVSPDYVLADVLARVSARLTGR*
Ga0074057_100114493	3300006605	Soil	SRTRARTSIPEADMRLDISLLEPPQDAERAIYVSPDYVLADVLAMVSARLTGR*
Ga0066659_105180031	3300006797	Soil	LVLVYLDTPLSVIDERRAANSRTRARTSVPEGNMRQDISVFEPPEPAERAVYVSPDYVLSEVLARISARLKRS*
Ga0079220_106212923	3300006806	Agricultural Soil	AVIEERRTANSRTRARTSVPDAKIRTDMSLLDPPEEAERAVYVSPGYVLPEVLARVSDRLAGR*
Ga0075434_1004889311	3300006871	Populus Rhizosphere	RRAANSGTRRRASIPEADMRLDVSLLEPPQDAERAIYVSPDDVLPEILAKVNARLTGR*
Ga0075436_1010062052	3300006914	Populus Rhizosphere	LVLVYLDTPLPVIDERRAANSGTRKRASIPEASMRFDISVLEPPQDAERAIYVSPDYVLADVLARVSARLTGH*
Ga0099794_100760203	3300007265	Vadose Zone Soil	IDERRAANSRTRTRTSIPEASMRLDISVLEPPQDAERAIYVSPDYVLPEVLARVSARLTGS*
Ga0099795_102385251	3300007788	Vadose Zone Soil	RAANSRTRARTSVPDAKMRLDTSVLEPPEKAERALYVSPDCVLPEVLARVSARLTQS*
Ga0105247_102150203	3300009101	Switchgrass Rhizosphere	HWADLVLVYLDTPLPVIDERRAANSGTRKRASIPEASMRFDISVLEPPQDAERAIYVSPDYVLADVLARVSARVTGR*
Ga0066709_1027609482	3300009137	Grasslands Soil	ELVLVYLDTPLSVIDKRRAANSRTRTRISIPEAKMRLDITLLEPPEDAERAIYVSPDYVLPEVLARISARLTGS*
Ga0099792_102076072	3300009143	Vadose Zone Soil	VLVYLDTPLSVIDERRAANSRTRARTSVPEGNMRQDISVFEPPEPAERAVYVSPDYVLSEVLARISARLKRS*
Ga0116133_12116911	3300009623	Peatland	VLVHLDTPLPLIEERRAANSRTRARTSMPEGKMRQDISLLKPPGDTERPIRVSPGYVRPEVLAKVSARLKKN*
Ga0134086_104647441	3300010323	Grasslands Soil	ERRAANSGTRRRTSIPEADMRLDVSLPEPPQDAERAIYVSPDYVLPEVLARVSARLAQN*
Ga0126381_1043883531	3300010376	Tropical Forest Soil	PLSVIDQRRAANSRTRARTSVPEAKMRLDSSLLEPPEEAERAVYVSPDYVLPEVLAKVSARLAGR*
Ga0134126_113700411	3300010396	Terrestrial Soil	LDTPLPVIDERRAANSGTRKRASIPEASMRFDISVLEPPQEAERAIYVSPDYVLADVLARVSARLTGR*
Ga0134124_113252771	3300010397	Terrestrial Soil	ANSGTRKRASIPEASMRFDISVLEPPQDAERAIYVSPDYVLADVLARVSARVTGR*
Ga0134127_102805973	3300010399	Terrestrial Soil	WADLVLVYLDTPLPVIDERRAANSGTRRRASIPEASMRLDISVLEPPQEAERAIYVSPDYVLADVLARVSARLTGR*
Ga0151490_13122092	3300011107	Soil	VYLDTPLPVIAERRAANSRTRARTSIPEADMRPDVSLLEPPQDAERAIYVSPDYVLADVLARVSARLTGR*
Ga0105246_123833932	3300011119	Miscanthus Rhizosphere	ANSGTRKRASIPEASMRFDISVLEPPQDAERAIYVSPDYVLADVLARVSARLTGR*
Ga0137388_119345571	3300012189	Vadose Zone Soil	LDTPLSVIDERRAANSRARRRTSIPEGNMRLDISLLEPPTDAERAVRVSPDYVLPEVLARVSARLTGS*
Ga0137364_104356671	3300012198	Vadose Zone Soil	PLSVIDEPRRANSRTRGRTSVPEGKMRQDISVLEPPEPAERAVYVSPDYVLSEVLARISARLKRS*
Ga0137383_100603611	3300012199	Vadose Zone Soil	RAANSRTRTRISIPEAKMRLDITLLEPPEDAERAIYVSPDYVLPEVLARISARLTGS*
Ga0137381_116095602	3300012207	Vadose Zone Soil	SRTRARTSVPDAKMRLETSLLEPPEEAERALYVSPDYVLPEVLARVSARLAQN*
Ga0137378_112605022	3300012210	Vadose Zone Soil	RTRARTSVPDAKMRLETSLLEPPEEAERALYVSPDYVLPEVLARVSARLAQN*
Ga0137386_109476081	3300012351	Vadose Zone Soil	VIDERRAANSRTRRRASIPEASMRLDISVLEPPQDAERAIYVSPDYVLADVLARVNARLTGS*
Ga0137384_104209351	3300012357	Vadose Zone Soil	AHLAGFVLIYLDTPLPVIGQRRAANSRTRARTSVPDAKMRLETSLLEPPEEAERALYVSPDYVLPEVLARVSARLAQN*
Ga0157322_10377801	3300012490	Arabidopsis Rhizosphere	ERRAANSGTRKRASIPEASMRFDISVLEPPQDAERAIYVSPDYVLADVLARVSARLTGS*
Ga0137404_113080652	3300012929	Vadose Zone Soil	VYLDTPLSVIDERRAANSRTRARTSVPEGNMRQDISVFEPPEPAERAVYVSPDYVLSEVLARISARLKRS*
Ga0137407_100836541	3300012930	Vadose Zone Soil	ANSGTRRRASIPEASMRLDISVLEPPQDAERAIYVSPDYVLADVLARVNARLTGS*
Ga0164300_101021063	3300012951	Soil	AANSGTRSRASIPEASMRFDISVLEPPQEAERAIYVSPDYVLADVLARVSARLTGR*
Ga0164304_117012811	3300012986	Soil	PVIDERRAANSGTRKRASIPEASMRFDISVLEPPQDAERAIYVSPDDVLPEILARVNARVTGR*
Ga0164305_117669331	3300012989	Soil	DHVLVYLDTPLSVIDERRAANSRTRTSVPEAKMRLDISLLEPPEDAERAVYVSPDYVVPEVLARVSARLTGS*
Ga0134075_104619982	3300014154	Grasslands Soil	VLVYLDTPLSVIDKRRAANSRTRTRTSIPEASMRLDISVLEPPQDAERAIYVSPDYVLPEILAKVNARLTGR*
Ga0163163_100988876	3300014325	Switchgrass Rhizosphere	VLVYLDTPLPVIDERRAANSGTRGRVSIPEASMRFEISVLEPPQDAERAIYVSPDYVLADVLARVSARVTGR*
Ga0132256_1021546552	3300015372	Arabidopsis Rhizosphere	ANSGTRRRASIPEASMRLDISVLEPPQDAEQAIYVSPDYVLADVLARVNARLTGS*
Ga0132255_1025574032	3300015374	Arabidopsis Rhizosphere	YLDTPLPVIDERRAANSGTRKRASIPEASMRFDISVLEPPQDAERAIYVSPDYVLADVLARVSARLTGR*
Ga0182037_120173531	3300016404	Soil	VYLDTPLSVIDQRRAANSRTRTSVPEAKMRLDISLLEPPEDAERAIYVSPDYVLPEVLARVSARLAGN
Ga0182039_119434812	3300016422	Soil	YLDTPLSVIDQRRAANSRTRTSVPEAKMRLDISLLEPPEDAERAIYVSPDYVLPEVLARISARLTGS
Ga0187766_104627902	3300018058	Tropical Peatland	VLVYLDTPLSVIDERRAANSRTRARTSIPEARMRLGISLLEPPEDAERAIYVSPDYVLPEVLARVSARLTGS
Ga0066662_111230791	3300018468	Grasslands Soil	NSRTRARTSVPEGNMRQDISVFEPPEPAERAVYVSPDYVLSEVLARISARLKRS
Ga0066669_110914851	3300018482	Grasslands Soil	ANSRTRARISVPDAKMRLDTSLLEPPEETERALYVSPDYVLPEVLARVSARLAQN
Ga0193755_11092252	3300020004	Soil	AVAEAHWAGLVLVYLDTPLPVIDERRTANSRTRRRASIPEASMRLDISILEPPQDAERAIYVSPDYVLADVLARVNARLTGS
Ga0193719_103972951	3300021344	Soil	ERRTANSRTRRRASIPEASMRLDISILEPPQDAERAIYVSPDYVLADVLARVNARLTGS
Ga0210384_100986594	3300021432	Soil	AELVLVYLDTPLPVIEERRAANSRTRARTSVPEGNMRQDISVFEPPEPAERAVYVSPDYVLSEVLARISARLAGS
Ga0126371_112746891	3300021560	Tropical Forest Soil	ERRAANSRTRARTSVPEGKMRTDISLLEPPEEAERAVYVSPDYVLPEVLARVTDRLTGS
Ga0247679_10660512	3300024251	Soil	HWADLVLVYLDTPLPVIDERRAANSGTRKRASIPEASMRFDISVLEPPQDAERAIYVSPDYVLADVLARVSARLTGR
Ga0247667_10343933	3300024290	Soil	VIDERRAANSGTRRRASIPEASMRFDISVLEPPQEAERAIYVSPDYVLADVLARVSARLTGR
Ga0207692_110261801	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	REANAQTRVSIPEAKMRQDISLLEPPHEAERAIYVSPDYVLPEVLARISARLSGR
Ga0207680_103805602	3300025903	Switchgrass Rhizosphere	NSGTRRRASIPEASMRFDISVLEPPQEAERAIYVSPDYVLADVLARVSARLTGR
Ga0207699_110594791	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	AAVAKAHWAELVLVYLDTPLPVIEERRAANSRTRARTSVPEGNMRQDISVFEPPEPAERAVYVSPDYVLSEVLARISARLAGS
Ga0207654_105249282	3300025911	Corn Rhizosphere	YLDTPLPVIDERRAANSGTRKRASIPEASMRFDISVLEPPQEAERAIYVSPDYVLADVLARVSARLTGR
Ga0207693_109954782	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	ANSRTRARTSVPDGKMRTDTSLLEPPEEAERAIYVSPGYVLSEVLAQVSARLAGH
Ga0207662_100277016	3300025918	Switchgrass Rhizosphere	VLVYLDTPLPVIDERRAANSGTRKRASIPEASMRFDISVLEPPQEAERAIYVSPDYVLADVLARVSARLTGR
Ga0207700_119773701	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	YWANHVLVYLDTPLSVIDERRAANSRTRTSVPEAKMRLDISLLEPPEDAERAVYVSPDYVVPEVLARVSARLTGS
Ga0207706_108078031	3300025933	Corn Rhizosphere	AAVAEAHWADLVLVYLDTPLPVIDERRAANSGTRRRASIPEASMRFDISVLEPPQDAERAIYVSPDYVLADVLARVSARLTGR
Ga0207679_121534111	3300025945	Corn Rhizosphere	VIDERRAANSGTRKRASIPEASMRFDISVLEPPQDAERAIYVSPDYVLADVLARVSARLTGR
Ga0207703_118833482	3300026035	Switchgrass Rhizosphere	SGTRKRASIPEASMRFDISVLEPPQDAERAIYVSPDYVLADVLARVSARLTGR
Ga0207702_119251212	3300026078	Corn Rhizosphere	TPLAVIEERRTANSRTRARTSVPDAKIRTDMSLLDPPEETEHGIYVSPGYVLPEVLAQVSARLAGR
Ga0257146_10816352	3300026374	Soil	IDERRAANSGTRRRASIPEASMRLDISVLEPPQDAERAIYVSPDYVLADVLARVNARLTG
Ga0257165_10428202	3300026507	Soil	FVLIYLDTPLPVIGQRRAANSRTRARTSVPDAKMRLDTSALEPPEKAERALYVSPDYVLPEVLARVSARLTQS
Ga0209326_10002661	3300026899	Forest Soil	TRRRASIPEADMRLDVSLLEPPQDAERAIYVSPDDVLPEILARVNARLTGR
Ga0209620_10090132	3300026911	Forest Soil	YLDTPPSVIDERRAANSGTRRRASIPEASMRLDISVLEPPQEAERAIYVSPDYVLADVLARVSARLTGR
Ga0209178_10865073	3300027725	Agricultural Soil	SRTRARTSVPDAKIRTDTSLLDPPGEAERAIRVSPGYVLPEVLAQVSARLTGR
Ga0209177_104010252	3300027775	Agricultural Soil	EERRTANSRTRARTSVPDAKIRTDMSLLDPPEEAERAVYVSPGYVLPEVLARVSDRLAGR
Ga0307323_100177301	3300028787	Soil	DERRAANSGTRRRASIPEASMRLDISVLEPPQDAERAIYVSPDYVLADVLARVSARLTGS
Ga0307292_102654562	3300028811	Soil	LPVIDERRTANSRTRRRASIPEASMRLDISILEPPQDAERAIYVSPDYVLADVLARVNARLTGS
Ga0308309_104434422	3300028906	Soil	AKAHWAELVLVYLDTPLPVIEERRAANSRTRARTSVPEGNMRQDISIFEPPEPAERAVYVSPDYVLSEVLARISARLTRS
Ga0318542_106260292	3300031668	Soil	TKAHWAELVLVYLDTPLSVIDERRAANARTRISIPEAKMRQDIALLEPPQEAERAIYVSPDYVLPEVLARISARLSGR
Ga0307476_113565282	3300031715	Hardwood Forest Soil	AVAEAHWADLVLVYLDTPLPVIDERRAANSRTRRRASIPEASMRFDISVLEPPQDAERAIYVGPDYVLADVLARVSARLTGR
Ga0310813_111993161	3300031716	Soil	VLVYLDTPLPVIEERRAANSGTRRRASIPEANMRLDVSLLEPPQDAERAIYVSPDYVLPEILAKVNARLTGR
Ga0318494_100979791	3300031751	Soil	LVYLDTPPSVIDERRAANSRTRARTSVPEGKMRLDISRLQPPEEAERAIYVSPDDVLPEVLARVSARLTGN
Ga0318494_104719182	3300031751	Soil	KAHLAHLVLVYLDTPLSVIDDRRAANSRTRISIPEAKMRLDISLLEPPEEAERAIYVGPGYVLPEVLARVSARITGS
Ga0318554_101404381	3300031765	Soil	AAVAEAHWAGFVLVYLDTPPSVIDERRAANSRTRARTSVPEGKMRLDISRLQPPEEAERAIYVSPDDVLPEVLARVSARLTGN
Ga0318546_106303392	3300031771	Soil	VLVYLNTPLSVIDERRAANARTRTSIPEAKMRLDISLLQPPEDAERAIYVSPDYVLPEVLAKIGARLTGS
Ga0318498_101818091	3300031778	Soil	VVEAHWAELVLVYLDTPLSVIDERRAANARTRTSIPEAKMRLDISLLQPPEDAERAIYVSPDYVLPEVLAKIGARLTGS
Ga0318566_102154063	3300031779	Soil	VYLDTPPSVIDERRAANSRTRARTSVPEGKMRLDISRLQPPEEAERAIYVSPDDVLPEVLARVSARLTGN
Ga0318547_107422713	3300031781	Soil	DRRAANSRTRISIPEAKMRLDISLLEPPEEAERAIYVAPGYVLPEVLARVSARITGS
Ga0318552_104728572	3300031782	Soil	EAHWAELVLVYLDTPLSVIDERRAANAGTRTSIPEAKMRLDISLLQPPEDAERAIYVSPDYVLPEVLAKIGARLTGS
Ga0318576_104751501	3300031796	Soil	YLDTPLSVIDERRAANARTRTSIPEAKMRLDISLLQPPEDAERAIYVSPDYVLPEVLAKIGARLTGS
Ga0318568_100883074	3300031819	Soil	SVIDERRAANSRTRARTSVPEGKMRLDISRLQPPEEAERAIYVSPDDVLPEVLARVSARLTGN
Ga0318527_100453893	3300031859	Soil	LVYLDTPLSVIDERRAANSRTRARTSIPEATMRLGIPLLEPPEDAERAIYVSPDYVLPEVLARVRARLTGS
Ga0318536_102434712	3300031893	Soil	LVYLDTPLSVIDERRAANARTRTSIPEAKMRLDISLLQPPEEAERAIYVRPDYVLPEVLAKIGARLTGS
Ga0308174_105954811	3300031939	Soil	AEAHWAGFVLVYLDTPLPVIEERRAANSRTRARASVPDGKIRTDAALLEPPEEAERAIHVSPGYVLPEVLAQVSARLRGR
Ga0306922_106686031	3300032001	Soil	YLDTPLSVIDERRAANSRTRISIPEAKMRLDISLLEPPEEAERAIYVGPGYVLPEVLARVSARITGS
Ga0318562_101644171	3300032008	Soil	DERRAANSRTRARTSVPEGKMRTDISLLEPPEEAERAVYVSPDYVLPEVLARVSARLAGN
Ga0318563_108092211	3300032009	Soil	AKAHLAHLVLVYLDTPLSVIDDRRAANSRTRISIPEAKMRLDISLLEPPEEAERAIYVAPGYVLPEVLARVSARITGS
Ga0318533_103573551	3300032059	Soil	SVIDDRRAANSRTRISIPEAKMRLDISLLEPPEEAERAIYVGPGYVLPEVLARVSARITG
Ga0318504_106145742	3300032063	Soil	VYLDTPLSVIDDRRAANSRTRISIPEAKMRLDISLLEPPEEAERAIYVGPGYVLPEVLARVSARITGS
Ga0318510_104343912	3300032064	Soil	TPLSVIDERRAANARTRTSIPEAKMRLDISLLQPPEDAERAIYVSPDYVLPEVLAKIGARLTGS
Ga0318524_102531881	3300032067	Soil	ARMVLVYLDTPPPVIGERRAAHARSRAGLPEATMRLDIAPLEPPGDAERAVYVSPDYVLPEVLARVSARLTGG
Ga0318553_104186432	3300032068	Soil	GFVLVYLDTPPSVIDERRAANSRTRARTSVPEGKMRLDISRLQPPEEAERAIYVSPDDVLPEVLARVSARLTGN
Ga0307472_1010626031	3300032205	Hardwood Forest Soil	IDERREANAQTRVSIPEAKMRQDISLLEPPHEAERAIYVSPDYVLPEVLARISARLSGR
Ga0335085_115245861	3300032770	Soil	DERRAANSRTRARTSVPEGKMRLDISLLQPPEEAERAIYVSPDYVLAEVLARVSARLTGH
Ga0335078_115584292	3300032805	Soil	DTPPAVIDERRAANSRTRARTSVPEGKMRLDISLLQPPEEAERAIYVSPDYVLAEVLARVSARLTGH
Ga0335070_109973401	3300032829	Soil	VLVYLDTPLSVIDERREANSRTRTSIPEAKMRLDISLLDPPEAAEQAIYVGPDYVLPEVLAKISARLTGS
Ga0335072_115123972	3300032898	Soil	IDERRAANARTRISIPEAKMRRDISLLDPPHEAERAIYVSPDYVLPEVLARISARLSGR
Ga0335083_100913396	3300032954	Soil	RTRTRTSIPEASMRLDISVLEPPQDAERAVYVSPDYVLADVLARVSARLTGS
Ga0335083_102199783	3300032954	Soil	VIDERRAANSRTRARTSVPEAKMRLDISLLQPPEEAERAIYVSPDYVLPEVLASVSARLTGH
Ga0318519_101305534	3300033290	Soil	WADLVLVYLDTPPSVIDERRAANSRTRARTSVPEGKMRLDISRLQPPEEAERAIYVSPDDVLPEVLARVSARLTGN

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign