Metagenome / Metatranscriptome Family F069257

Basic Information
Family ID	F069257
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	126 residues
Representative Sequence	MRRRQAAFIFAVLCLTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYNSPEYLVLRRHGWITATGAACSADLGPAPCWDVVITPLGVDALRDWVAATAATSQYISVP
Number of Associated Samples	111
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	40.65 %
% of genes near scaffold ends (potentially truncated)	98.39 %
% of genes from short scaffolds (< 2000 bps)	83.06 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Most Common Taxonomy
Group	Bacteria (99.194 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (16.129 % of family members)
Environment Ontology (ENVO)	Unclassified (35.484 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (49.194 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 52.05% β-sheet: 2.74% Coil/Unstructured: 45.21%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF04055	Radical_SAM	24.19
PF13185	GAF_2	6.45
PF08238	Sel1	4.84

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.19 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.19 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.19 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	57.26 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	24.19 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	12.90 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	24.19 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.90 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
unclassified Terriglobales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales	24.19 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.90 %
Unclassified	root	N/A	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteriales bacterium 13_2_20CM_55_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	24.19 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	12.90 %
Unclassified	root	N/A	0.81 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002245\|JGIcombinedJ26739_101026393	All Organisms → cellular organisms → Bacteria → Acidobacteria	710	Open in IMG/M
3300004156\|Ga0062589_100618120	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	944	Open in IMG/M
3300004157\|Ga0062590_102084557	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300004157\|Ga0062590_102291332	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300004463\|Ga0063356_103819812	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	649	Open in IMG/M
3300004479\|Ga0062595_100173545	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1293	Open in IMG/M
3300005290\|Ga0065712_10355688	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	781	Open in IMG/M
3300005334\|Ga0068869_100240320	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1443	Open in IMG/M
3300005337\|Ga0070682_100087382	All Organisms → cellular organisms → Bacteria	2032	Open in IMG/M
3300005344\|Ga0070661_100524742	All Organisms → cellular organisms → Bacteria → Acidobacteria	950	Open in IMG/M
3300005367\|Ga0070667_101268190	All Organisms → cellular organisms → Bacteria → Acidobacteria	690	Open in IMG/M
3300005434\|Ga0070709_10999968	All Organisms → cellular organisms → Bacteria → Acidobacteria	665	Open in IMG/M
3300005436\|Ga0070713_100082667	All Organisms → cellular organisms → Bacteria	2743	Open in IMG/M
3300005439\|Ga0070711_100646522	All Organisms → cellular organisms → Bacteria → Acidobacteria	886	Open in IMG/M
3300005440\|Ga0070705_101904550	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300005444\|Ga0070694_100046261	All Organisms → cellular organisms → Bacteria	2921	Open in IMG/M
3300005454\|Ga0066687_10097096	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1480	Open in IMG/M
3300005458\|Ga0070681_10474612	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	1163	Open in IMG/M
3300005468\|Ga0070707_101954902	All Organisms → cellular organisms → Bacteria	554	Open in IMG/M
3300005548\|Ga0070665_101908752	All Organisms → cellular organisms → Bacteria → Acidobacteria	600	Open in IMG/M
3300005921\|Ga0070766_10253223	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1118	Open in IMG/M
3300006028\|Ga0070717_10172292	All Organisms → cellular organisms → Bacteria	1883	Open in IMG/M
3300006041\|Ga0075023_100034418	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1510	Open in IMG/M
3300006047\|Ga0075024_100086008	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1361	Open in IMG/M
3300006047\|Ga0075024_100168488	All Organisms → cellular organisms → Bacteria → Acidobacteria	1008	Open in IMG/M
3300006057\|Ga0075026_100495000	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300006059\|Ga0075017_100624781	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	825	Open in IMG/M
3300006059\|Ga0075017_101102152	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	620	Open in IMG/M
3300006162\|Ga0075030_100068024	All Organisms → cellular organisms → Bacteria	2938	Open in IMG/M
3300006173\|Ga0070716_100463076	All Organisms → cellular organisms → Bacteria → Acidobacteria	927	Open in IMG/M
3300006174\|Ga0075014_100708913	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300006606\|Ga0074062_10504413	All Organisms → cellular organisms → Bacteria	661	Open in IMG/M
3300006854\|Ga0075425_101396509	All Organisms → cellular organisms → Bacteria → Acidobacteria	792	Open in IMG/M
3300007076\|Ga0075435_101874255	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300007265\|Ga0099794_10240007	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	933	Open in IMG/M
3300009090\|Ga0099827_11385893	All Organisms → cellular organisms → Bacteria → Acidobacteria	612	Open in IMG/M
3300009093\|Ga0105240_10125587	All Organisms → cellular organisms → Bacteria	3083	Open in IMG/M
3300009098\|Ga0105245_10221360	All Organisms → cellular organisms → Bacteria	1826	Open in IMG/M
3300009098\|Ga0105245_12304804	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	592	Open in IMG/M
3300009143\|Ga0099792_10562234	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	722	Open in IMG/M
3300009177\|Ga0105248_10239849	All Organisms → cellular organisms → Bacteria	2041	Open in IMG/M
3300009551\|Ga0105238_10094493	All Organisms → cellular organisms → Bacteria	2978	Open in IMG/M
3300010371\|Ga0134125_10550609	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1276	Open in IMG/M
3300010373\|Ga0134128_10126465	All Organisms → cellular organisms → Bacteria	2896	Open in IMG/M
3300010375\|Ga0105239_13458152	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300010396\|Ga0134126_10034722	All Organisms → cellular organisms → Bacteria	6372	Open in IMG/M
3300010396\|Ga0134126_10399147	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1598	Open in IMG/M
3300010401\|Ga0134121_12203323	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300011271\|Ga0137393_10107055	All Organisms → cellular organisms → Bacteria	2291	Open in IMG/M
3300012096\|Ga0137389_11663883	All Organisms → cellular organisms → Bacteria	534	Open in IMG/M
3300012202\|Ga0137363_10167286	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1741	Open in IMG/M
3300012203\|Ga0137399_10281423	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1370	Open in IMG/M
3300012207\|Ga0137381_11716419	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300012211\|Ga0137377_11525268	All Organisms → cellular organisms → Bacteria → Acidobacteria	594	Open in IMG/M
3300012505\|Ga0157339_1038272	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	591	Open in IMG/M
3300012683\|Ga0137398_10774238	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	670	Open in IMG/M
3300012917\|Ga0137395_10473945	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	900	Open in IMG/M
3300012917\|Ga0137395_11283644	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300012925\|Ga0137419_10168117	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1598	Open in IMG/M
3300012925\|Ga0137419_10433208	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	1033	Open in IMG/M
3300012929\|Ga0137404_11561322	All Organisms → cellular organisms → Bacteria → Acidobacteria	611	Open in IMG/M
3300012944\|Ga0137410_12065115	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300012955\|Ga0164298_10834003	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	663	Open in IMG/M
3300012960\|Ga0164301_10344190	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	1022	Open in IMG/M
3300012985\|Ga0164308_10932286	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	767	Open in IMG/M
3300012986\|Ga0164304_10545917	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	855	Open in IMG/M
3300012988\|Ga0164306_11297133	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300012989\|Ga0164305_11139744	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	672	Open in IMG/M
3300013308\|Ga0157375_10466847	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1427	Open in IMG/M
3300014969\|Ga0157376_10816445	All Organisms → cellular organisms → Bacteria → Acidobacteria	946	Open in IMG/M
3300015053\|Ga0137405_1139371	All Organisms → cellular organisms → Bacteria → Acidobacteria	755	Open in IMG/M
3300015077\|Ga0173483_10246954	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	847	Open in IMG/M
3300017924\|Ga0187820_1089744	All Organisms → cellular organisms → Bacteria	873	Open in IMG/M
3300017947\|Ga0187785_10086022	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1236	Open in IMG/M
3300017974\|Ga0187777_10876521	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	644	Open in IMG/M
3300018089\|Ga0187774_10786157	All Organisms → cellular organisms → Bacteria → Acidobacteria	641	Open in IMG/M
3300019885\|Ga0193747_1004447	All Organisms → cellular organisms → Bacteria	3424	Open in IMG/M
3300019887\|Ga0193729_1205620	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300020006\|Ga0193735_1016349	All Organisms → cellular organisms → Bacteria	2316	Open in IMG/M
3300020579\|Ga0210407_10985849	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300020579\|Ga0210407_11409207	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300020583\|Ga0210401_10454063	All Organisms → cellular organisms → Bacteria → Acidobacteria	1144	Open in IMG/M
3300021080\|Ga0210382_10528889	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300021178\|Ga0210408_10076971	All Organisms → cellular organisms → Bacteria	2614	Open in IMG/M
3300021478\|Ga0210402_10176841	All Organisms → cellular organisms → Bacteria	1955	Open in IMG/M
3300021479\|Ga0210410_10168923	All Organisms → cellular organisms → Bacteria	1954	Open in IMG/M
3300021479\|Ga0210410_11410761	All Organisms → cellular organisms → Bacteria → Acidobacteria	589	Open in IMG/M
3300024246\|Ga0247680_1061139	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300025315\|Ga0207697_10459172	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	564	Open in IMG/M
3300025321\|Ga0207656_10208081	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	947	Open in IMG/M
3300025899\|Ga0207642_10726968	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	627	Open in IMG/M
3300025903\|Ga0207680_10033360	All Organisms → cellular organisms → Bacteria	2936	Open in IMG/M
3300025904\|Ga0207647_10740936	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300025905\|Ga0207685_10156708	All Organisms → cellular organisms → Bacteria → Acidobacteria	1036	Open in IMG/M
3300025915\|Ga0207693_10888012	All Organisms → cellular organisms → Bacteria → Acidobacteria	684	Open in IMG/M
3300025920\|Ga0207649_10921072	All Organisms → cellular organisms → Bacteria → Acidobacteria	686	Open in IMG/M
3300025928\|Ga0207700_10067553	All Organisms → cellular organisms → Bacteria	2737	Open in IMG/M
3300025939\|Ga0207665_10405423	All Organisms → cellular organisms → Bacteria → Acidobacteria	1039	Open in IMG/M
3300025942\|Ga0207689_10106441	All Organisms → cellular organisms → Bacteria	2304	Open in IMG/M
3300025961\|Ga0207712_10579996	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	968	Open in IMG/M
3300026142\|Ga0207698_10028859	All Organisms → cellular organisms → Bacteria	3964	Open in IMG/M
3300026281\|Ga0209863_10143604	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300026312\|Ga0209153_1249528	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	573	Open in IMG/M
3300026316\|Ga0209155_1248800	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300026351\|Ga0257170_1062864	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300026354\|Ga0257180_1012935	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	1021	Open in IMG/M
3300026469\|Ga0257169_1019789	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	947	Open in IMG/M
3300026482\|Ga0257172_1101586	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300027862\|Ga0209701_10298110	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	927	Open in IMG/M
3300027882\|Ga0209590_10178514	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1333	Open in IMG/M
3300027910\|Ga0209583_10677209	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300027915\|Ga0209069_10328636	All Organisms → cellular organisms → Bacteria → Acidobacteria	819	Open in IMG/M
3300028379\|Ga0268266_11418775	All Organisms → cellular organisms → Bacteria → Acidobacteria	670	Open in IMG/M
3300028673\|Ga0257175_1007061	All Organisms → cellular organisms → Bacteria → Acidobacteria	1591	Open in IMG/M
3300031715\|Ga0307476_10931365	All Organisms → cellular organisms → Bacteria → Acidobacteria	641	Open in IMG/M
3300031716\|Ga0310813_10128155	All Organisms → cellular organisms → Bacteria	2013	Open in IMG/M
3300031720\|Ga0307469_10048990	All Organisms → cellular organisms → Bacteria	2638	Open in IMG/M
3300031720\|Ga0307469_10247115	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1432	Open in IMG/M
3300031720\|Ga0307469_10695737	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	921	Open in IMG/M
3300031720\|Ga0307469_10824188	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	853	Open in IMG/M
3300031908\|Ga0310900_11619457	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300032180\|Ga0307471_100197981	All Organisms → cellular organisms → Bacteria	2006	Open in IMG/M
3300032180\|Ga0307471_102368150	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → unclassified Terriglobales → Acidobacteriales bacterium 13_2_20CM_55_8	671	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	78.23%
Host-Associated	Host-Associated	21.77%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	68.55%
Plants	Host-Associated → Plants	21.77%
Aquatic	Environmental → Aquatic	9.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	68.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere	13.71%
Sediment	Environmental → Aquatic → Sediment	8.06%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.06%
Freshwater	Environmental → Aquatic → Freshwater	1.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	51.61%
Loam	Environmental → Terrestrial → Soil → Loam	13.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.06%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	7.26%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.84%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.23%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.81%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.84%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.13%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.06%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	7.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.84%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.23%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.42%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.61%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.81%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.81%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.81%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.81%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.13%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.48%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.87%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	8.06%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.65%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.23%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.23%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.61%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.61%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.61%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.81%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.81%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005458	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012505	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.10.yng.090610	Host-Associated	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300019885	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300024246	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK21	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025321	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026281	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046 (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026351	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-05-B	Environmental	Open in IMG/M
3300026354	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-04-B	Environmental	Open in IMG/M
3300026469	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-B	Environmental	Open in IMG/M
3300026482	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DW-16-B	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027910	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028673	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NI-69-B	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ26739_1010263932	3300002245	Forest Soil	MRRRQVAYIFALLCFTVACSPRDFLTRRLATDLIAGSDTFKMTQLFWLRTGVISGKDYTSPEYVVLRRRGWITGTSVACPPELAPPPCWDMVITPLGVDALRDWVAATAASSQYISVPVAQRELLAVTGIHKNG
Ga0062589_1006181201	3300004156	Soil	MRRRQAAFIFAVLCLTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYNSPEYLVLRRHGWITATGAACSADLGPAPCWDIVISPLGVDALRDWVAATAATSQYISVPVAQRELLGLSGIRKNGNFADVDFQWRWAPVNEVGAA
Ga0062590_1020845571	3300004157	Soil	MRPRQAAFIFAVLCLTVACSPRDFLTRRLATDLIAGSETFKMTQLFWLRTGVISNKDYTSPEYLVLRRHGWITATGAACSADLGPAPCWDVVITPLGVDALRDWVAATAATAQYISVPVAQRELLGLSGIR
Ga0062590_1022913321	3300004157	Soil	MRRRQAAFIFAVLCLTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYNSPEYLVLRRHGWITATGAACSADLGPAPCWDIVISPLGVDALRDWVAATAATSQYISVPVAQRELLGLSGIR
Ga0063356_1038198121	3300004463	Arabidopsis Thaliana Rhizosphere	MRRRQAAFIFAVLCLTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYNSPEYLVLRRHGWITATGAACSADLGPAPCWDIVISPLGVDALRDWVAATAATSQYISVPVAQRELLGLS
Ga0062595_1001735451	3300004479	Soil	MRRRQAAFIFAVLCLTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYNSPEYLVLRRHGWITATGAACSADLGPAPCWDIVISPLGVD
Ga0065712_103556881	3300005290	Miscanthus Rhizosphere	MRRRQAAFIFAVLCLTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYNSPEYLVLRRHGWITATGAACSADLGPAPCWDIVISPLGVDALRDWVAATAATS
Ga0068869_1002403201	3300005334	Miscanthus Rhizosphere	MRRRQAAFIFAVLCLTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYNSPEYLVLRRHGWITATGAACSADLGPAPCWDIVISPLG
Ga0070682_1000873823	3300005337	Corn Rhizosphere	MRRRQAAFIFAVLCLTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYNSPEYLVLRRHGWITATGAACSADLGPAPCWDIVISPLGVDALRDWVAATAATSQYISVPVAQRELLGLSGIRKNGNFADVDFQWRWAPVNEVGAALYA
Ga0070661_1005247422	3300005344	Corn Rhizosphere	MRRAQSAFIFIFISAILCITVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYTSPEYLVLRRHGWITGSNASCTPDLAPNPCWDVVITPLGVDALRDWVSATAASSQYISVPVAQR
Ga0070667_1012681901	3300005367	Switchgrass Rhizosphere	MRSRQTAFIFAVLCLTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYTSPEYLVLRRHGWITGSTAPCTPDLGVGPCWEVVITPLGVDALRDWVAATAATSQYISVPVAQRELVGLSGIRKNGSFADIDFQWRWAA
Ga0070709_109999682	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MFVLLGFTVACSPRDFLTRRLATDLIAGSDSFKMTQQFWLRTGVISNKDYTSPEYTMLRRRGWITGSGVSCPPEITSPPCWDMVITPLGVDALR
Ga0070713_1000826671	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MLRPRIAITLLVLCFAVACSPRDLLTRRLATDLIAGSDSFKTTQQFWLRTGIISSKDYSSSEYVTLRRRGWITGNNASCPPEIPAPSCWDMVITPLGVDALRDWVSATAASSQYISVPVAQRELLAVTGIHRNGSVAD
Ga0070711_1006465222	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	LCITVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYTSPEYLVLRRHGWITGSNASCTPDLAPNPCWDVVITPLGVDALRDWVSATAASSQYISVPVAQREMLGLTGIRKNGNFADVDFRWRWAAVNEVGAALYAKGTEYNST
Ga0070705_1019045501	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	VEARVWLQFQASMRSRQTAFIFAVLCLTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYTSPEYLVLRRHGWITGSTAPCTPDLGVGPCWEVVITPLGVDALRDWVAATAATSQYISVPVAQRELVGLSGIRKNGSFADIDFQWRWAAVNEVGAALY
Ga0070694_1000462613	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MRRRQAAFIFAVLCLTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYNSPEYLVLRRHGWITATGAACSADLGPAPCWDIVISPLGVDALRDWVA
Ga0066687_100970962	3300005454	Soil	MPRRQIALIFALLCSTTACSPRDFLTRRLATDLIAGSDTFKTTQVFWLRTGVLSSKDYSSSEYAAMRRHGWITGTGVSCPADLAPPCWDLVITPLGVDTLRDWVNAT
Ga0070681_104746121	3300005458	Corn Rhizosphere	MRRRQAAFIFAVLCLTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYNSPEYLVLRRHGWITATGAACSADLGPSPCWDVVISPLGVDALRDWVAATAATSQYISVPVAQRELLGLSGIRKNGNFADVDFQWRWAP
Ga0070707_1019549021	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MRSRQSAFIFAVLCLTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYTSPEYLVLRRHGWITGSTAPCTPDLGVAPCWDVVITPLGVDALRDWVAATAAASQYISVPVAQRELLGLSGIRKNGNFADVDFQWRWAAVNEVGAALYAK
Ga0070665_1019087521	3300005548	Switchgrass Rhizosphere	MRRRHAAFIFIFAILCFTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYTSPEYLVLRRHGWITGSNASCTPDLAPNPCWDVVITPLGVDA
Ga0070766_102532232	3300005921	Soil	MRRRQAAFIFAMLCFTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYTSPEYLVLRRHGWITASNAVCTPDLGLAPCWDVVITPLGVD
Ga0070717_101722921	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MLRSQVAIVLLLLSLTACSPRDFLTRRLATDLIAGTETFKTTQQFWLRTGVISNKDYSSAEYVTLRRRGWITGNGVSCPLEIVSPPCWDVVITPLGVDALRDWVSATAASTQYISVPVAQRELV
Ga0075023_1000344181	3300006041	Watersheds	MTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYTSPEYLVLRRHGWITGSNASCTPDLAPNPCWDVVITPLGVDALRDWVSATAASSQYISVPVAQREMLGLTGIRKNGNFADVDFHWRWAAVNEVGAALYSKGTEYNS
Ga0075024_1000860082	3300006047	Watersheds	MTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYTSPEYLVLRRHGWITGSNASCTPDLAPNPCWDVVITPLGVDALRDWVSATAAS
Ga0075024_1001684881	3300006047	Watersheds	VVLCLAVACSPRDFLTRRLAGDLIAGSDTFKLTQQFWLRTGVVSNRDYTSQEYLVLRRRGWITGGNVACPADITPGPCWDMVITPLGVDALRDWVAASAANSQYISVPVAQRELVGVTGIRKNGTVADADFQWRWAAVNEVGSALYARTGEFNSTV
Ga0075026_1004950002	3300006057	Watersheds	MRSRQAALIFAALCFTIACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYTSPEYLVLRRHGWITGSTAACTPDLGAAPCWEVVITPLGVDALRDWVAATAASSQYIS
Ga0075017_1006247812	3300006059	Watersheds	MPLRQVAFIFALLCLTVSCSPRDFLTRRLATDLIAGSDTFKMTQLFWLRTGVVSNKDYASPEYLVLRRRGWITGNGVACPADLVPPPCWEMVITPLGVD
Ga0075017_1011021521	3300006059	Watersheds	MPRRQLVLILVLLCVTLSCSPRDFLTRRLATDLIAGSDTFKMTQLFWLRTGVISNKDYTSPEYLVLRRRGWITGSGVACPADLVPPPCWDMVVTPLGVDALRDWVTATAASSQYISVPVAQRE
Ga0075030_1000680241	3300006162	Watersheds	MPRRQVALILALLCSTVACSPRDFLTRRLATDLIAGSDTFKMTQLFWLRTGVISNKDYSSPEYLVLRRHGWITGSGVACPPDLAFPPCWDVVITPLGVDALRDWVAATAASSQYISVPVAQREMLGVTGIRRNGNSADVDFQWRWSAVNEVGAALYAKGT
Ga0070716_1004630762	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MFVLLGFTVACSPRDFLTRRLATDLIAGSDSFKMTQQFWLRTGVISNKDYTSPEYTMLRRRGWITGSGVSCPPEITSPPCWDMVITPLGVDALRDWVSATAASSQYISVPVA
Ga0075014_1007089131	3300006174	Watersheds	MTQLFWLRTGVLSNKDFTSPEYLVLRRRGWITGNGTACAPDLMPPPCWDTVITPLGVDALRDWVTATAASSQYISVPVAQREMLAVTGIHKDGNLADVDFQWRWAAVNDVGSALYAKGAEYDSTVGFI
Ga0074062_105044131	3300006606	Soil	MRRAQSAFIFIFISAILCITVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYTSPEYLVLRRHGWITGSNAPCTPDLAPAPCWDVVITPLGVDALRDWVSATAASSQYISVPVAQREMLGLTGIRKNGNFADVDFRWRWA
Ga0075425_1013965092	3300006854	Populus Rhizosphere	MPRPQVVIVFVLLCLSVACSPRDFLTRRLATDLIAGSDSFKMTQQFWLRTGVISNKDYSSPEYVTLRRRGWIIGNNAACPPEITSPPCWDMVITPLGVDVLRDWVSATAASTQYISVPVAQRELLAVTGIHKDGSLAEVDFQWRWAAVNEVGA
Ga0075435_1018742551	3300007076	Populus Rhizosphere	MPRPQVVIVFVLLCLSVACSPRDFLTRRLATDLIAGSDSFKMTQQFWLRTGVISNKDYSSPEYVTLRRRGWIIGNNAACPPEITSPPCWDMVITPLGVDVLRDWVSATAASTQYISVPVAQRELLAVTGIHKDGSLAEVD
Ga0099794_102400072	3300007265	Vadose Zone Soil	MLRPQVAIIFALLWLTVACSPRDFLTRRLATDLIAGSDSFKMTQQFWLRTGVISNKDYTSPEYVTLRRRGWITGSGVSCPPEITSPPCWDMVITPLGVDALRDWVSATAASSQYISVPVAQRELLTVT
Ga0099827_113858932	3300009090	Vadose Zone Soil	MLRSQVAIGFVLLSLTACSPRDFLTRRLATDLIAGAESFKTTQQFWLRTGVVSSKDYTSSEYVTLRRRGWITGNGVSCPPEIVSPACWDVVITPLGVGAV
Ga0105240_101255871	3300009093	Corn Rhizosphere	MRRRQAAFIFAVLCLTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYNSPEYLVLRRHGWITATSAACSADLGPAPCWDIVISPLGVDALRDWVAAT
Ga0105245_102213603	3300009098	Miscanthus Rhizosphere	MRRRQAAFIFAVLCLTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYNSPEYLVLRRHGWITATGAACSADLGPSPCWDVVISPLGVDALRDWVAATAATSQYISVPVAQRELLGLSGIR
Ga0105245_123048042	3300009098	Miscanthus Rhizosphere	MRPRQAAFIFAVLCLTVACSPRDFLTRRLATDLIAGSETFKMTQLFWLRTGVISNKDYTSPEYLVLRRHGWITATGAACSADLGPAPCWDIVISP
Ga0099792_105622341	3300009143	Vadose Zone Soil	MLRPQVAIIFALLWLTVACSPRDFLTRRLATDLIAGSDSFKMTQQFWLRTGVISNKDYTSPEYVTLRRRGWITGSGVSCPPEITSPPCWDMVITPLGVDALRDWVSATAASSQYISVPVAQRELLTV
Ga0105248_102398493	3300009177	Switchgrass Rhizosphere	MRSRQTAFIFAVLCLTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYTSPEYLVLRRHGWITGSTAPCTPDLGVGPCWEVVITPLGVDALRDWVAATAATSQYISVPVAQRELVGLSGIRKNGSFADIDFQWRWAAVNE
Ga0105238_100944933	3300009551	Corn Rhizosphere	MRRRQAAFIFAVLCLTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYNSPEYLVLRRHGWITATGAACSADLGPAPCWDIVISPLGVDALRDWVAATAATSQYISVPVAQRELLGLSGIRKNGNFADVDFQWRW
Ga0134125_105506092	3300010371	Terrestrial Soil	MRRRQAAFIFAVLCLTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYNSPEYLVLRRHGWITATGAACSADLGPSPCWDVVISPLGVDALRDWVAATAATSQYI
Ga0134128_101264653	3300010373	Terrestrial Soil	MRRRQAAFIFAVLCLTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYNSPEYLVLRRHGWITATGAACSADLGPAPCWDIVISPLGVDALRDWVAATAATSQYISVPVAQRELLGLSGIRKNG
Ga0105239_134581521	3300010375	Corn Rhizosphere	MRRAQSAFIFIFISAILCITVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYTSPEYLVLRRHGWITGSNASCTPDLAPNPCWDVVITPLGVDALRDWVSATAASSQYISVPVAQREMLGLTGIRKNGNFADVDFRWR
Ga0134126_100347226	3300010396	Terrestrial Soil	MRSRQTAFIFAVLCLTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYTSPEYLVLRQHGWITGSTAPCTPDLGVGPCWEVVITPLGVDALRDWVAATAATSQ
Ga0134126_103991473	3300010396	Terrestrial Soil	MRRRQAAFIFAVLCLTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYNSPEYLVLRRHGWITATSAACSADLGPAPCWDIVISPLGVDALRDWVAATA
Ga0134121_122033231	3300010401	Terrestrial Soil	MPRRQVACIFALLCFAVSCSPRDFLTRRLATDLIAGSDTFKTTQLFWLRTGVVSNKDYQSPEYVVLRRRGWVIGNGVACPPDVAPAPCWDMVITPLGVDVLRDWVTASAASSQYISVPAAQRELLAVTGIHKNGTVADVDFQWRWAAVNDVGAAL
Ga0137393_101070553	3300011271	Vadose Zone Soil	MPRPQVAVIFALLCLSVACSPRDFLTRRLATDLIAGSDSFKVTQQFWLRTGVISNKDYTSPEYVTLRRRGWITGNNAACPAEIASPPCWDMVITPLGVDALRDWVSATAASSQYISVPVAQRELLAVTGIHKDGS
Ga0137389_116638831	3300012096	Vadose Zone Soil	MLRKLSMTPRTREWRQFKLSRCLVFALLGLTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYTSPEYLMLRRHGWITGSTAPCTPDLGVAPCWDVVITPLGVDALRDWVAATGATSQYISVPVAQRELLGLSGIRKNGNFADVDF
Ga0137363_101672862	3300012202	Vadose Zone Soil	MLRKLSMTPRTRKWRQFKLSRCLVFALLGLAVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYTSPEYLVLRRHGWITGSTAPCMPDLGVAPCWDVVITPLGVDALRDWVAATAATSQSI
Ga0137399_102814231	3300012203	Vadose Zone Soil	MLRPQVAIIFALLWLTVACSPRDFLTRRLATDLIAGSDSFKMTQQFWLRTGVISNKDYTSPEYVTLRRRGWITGSGVSCPPEITSPPCWDMVITPLGVDALRDWVSATAASSQYISVPVAQRELLTVTGIHKNGSWAD
Ga0137381_117164191	3300012207	Vadose Zone Soil	MSRPQVAVIFVLLCLSVACSPRDFLTRRLATDLIAGADSFKMTQQFWLRTGVISNKDYTSPEYVTLRRRGWITGNNAACTPEITSSPCWDIVVTPLGVDVLRDWVTATAASSQYISVPVAQRELLAVTGIH
Ga0137377_115252682	3300012211	Vadose Zone Soil	MLRSHVAIVLVLLSLTACSPRDFLTRRLATDLIAGAETFKTTQQFWLRTGVISNKDYTSAEYVTLRRRGWITGNGVSCPPEIVSPPCWDVVITPLGVDALRDWVSATAASTQYISVPVAQRE
Ga0157339_10382721	3300012505	Arabidopsis Rhizosphere	MRRRQAAFIFAVLCLTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYNSPEYLVLRRHGWITATGAACSADLGPAPCWDIVISPLGVDALR
Ga0137398_107742381	3300012683	Vadose Zone Soil	MLRPQVAIIFALLWLTVACSPRDFLTRRLATDLIAGSDSFKMTQQFWLRTGVISNKDYTSPEYVTLRRHGWITGNNAVCPPEITSPTCWDMVITPLGVDALRDWVSATA
Ga0137395_104739452	3300012917	Vadose Zone Soil	MLRKLSMTPRTRIWRQFKLSRCLVFALLGLTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYTSPEYLVLRRHGWITGSTAPCTPDLGVAPCWDVVITPLGVDALRDWVAATAATSQYISVP
Ga0137395_112836441	3300012917	Vadose Zone Soil	MVRRHVALILALLCSTVACSPRDFLTRRLATDLIAGSDTFKMTQLFWLRTGVISNRDYSSPEYLVLRRHGWITGSGVPCPPDLAFPPCWDVVITPLGVDALRDWVAATAASS
Ga0137419_101681172	3300012925	Vadose Zone Soil	MLRKLSMTPRKRKWRQFKLSRCLVFALLGLAVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYTSPEYLVLRRHGWITGSTAPCTPDLGVAPCWDVVITPLGVDALRDWDAATAATSQYISVPVAQRELLGLSG
Ga0137419_104332081	3300012925	Vadose Zone Soil	MLRPQVAIIFALLWLTVACSPRDFLTRRLATDLIAGSDSFKMTQQFWLRTGVISNKDYTSPEYVTLRRRGWITGSGVSCPPEITSPPCWDMVITPLGVDALRDWVSATAASS
Ga0137404_115613221	3300012929	Vadose Zone Soil	MQRLPVAITLVLLSFTIACSPRDFLTRRLATDLIAGSDSFKTTQQFWLRTGVISNKDYTSPEYLTLRRRGWITGNGVPCPAEMPSPSCWDMVITPLGVDALRDWVSATAASSQYI
Ga0137407_112380621	3300012930	Vadose Zone Soil	MLRSHVAIVLVLLSLTACSPRDFLTRRLATDLIAGAETFKTTQQFWLRTGVISNKDYTSSEYVTLRRRGWITGNGVSCPPEIVSP
Ga0137410_120651151	3300012944	Vadose Zone Soil	MLRSQVAIGFVLLSLTACSPRDFLTRRLATDLIAGAESFKTTQQFWLRTGVVSNKDYTSSEYVTLRRRGWITGNGVSCPPEIVSPPCRDVVITPLGVDALRDWVSATAASTQYISVPV
Ga0164298_108340032	3300012955	Soil	MTVACSPRDFLTRRLATDLIAGSETFKTTELLLLRTGVIANKDYTSPEYLVLRRHGWITGSNASCTPDLAPTPCWDVVITPLGVDALRDWVSATAASSQYISVPVAQREMLGLTGIRKNG
Ga0164301_103441902	3300012960	Soil	MRPRQATFIFAVLCLTVACSPRDFLTRRLATDLIAGSETFKMTQLFWLRTGVISNKDYTSPEYLVLRRHGWITATGAACSADLGPAPCWDVVITPLGVDALRDWVAATAATSQYISVPVA
Ga0164308_109322861	3300012985	Soil	MRPRQATFIFAVLCLTVACSPRDFLTRRLATDLIAGSETFKMTQLFWLRTGVISNKDYTSPEYLVLRRHGWITATGAACSADLGPAPCWDVVITPLGVDALRDWVAAAAATSQYISV
Ga0164304_105459171	3300012986	Soil	MRRRQAAFIFAVLCLTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYNSPEYLVLRRHGWITATGAACSADLGPAPCWDVVISPLGVDALRDWVAATAATSQYISVPVAQRELVALSGIRKNGNFADVDFQWRWAPVNEVGAALYAKGT
Ga0164306_112971331	3300012988	Soil	MSRSQVAITFGLLVLLAACSPRDFLTRRLATDLIAGADTFKTTQQFWLRTGVISNRDYTSPEYVTLRRHGWITGNNAVCPPEIASPPCWDMVITPLGVDALRDWVSATAAGSQYISVPVAQRELLAVTGIHSSGSV
Ga0164305_111397442	3300012989	Soil	MRRRQAAFIFAVLCLTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYNSPEYLVLRRHGWITATGAACSADLGPAPCWDIVISPLGVDALRDWVAATAATSQYISVPVAQRELLGLSGIRK
Ga0157375_104668471	3300013308	Miscanthus Rhizosphere	MRRRQAAFIFAVLCLTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYNSPEYLVLRRHGWITATSAACSADLGPAPCWDIVISPLGVDALRDWVAATAATSQYISVPVAQRELLGLSGIRKNGNFADVDFQWRWAPVNEVGAALYAN
Ga0157376_108164452	3300014969	Miscanthus Rhizosphere	MRRAQSAFIFIFISAILCITVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYTSPEYLVLRRHGWITGSNASCTPDLAPNPCWDVVITPLGVD
Ga0137405_11393711	3300015053	Vadose Zone Soil	MLRSQVAIGFVLLSLTACSPRDFLTRRLATDLIAGAESFKTTQQFWLRTGVVSNKDYTSSEYVTLRRRGWITGNGVFPVLLKLCPRLAGMW*
Ga0173483_102469542	3300015077	Soil	MRRRQAAFIFAVLCLTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYNSPEYLVLRRHGWITATGAACSADLGPAPCWDIVISPLGV
Ga0187820_10897442	3300017924	Freshwater Sediment	MRLRQAALIFAVLCFTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNRDYTSPEYLVLRRHGWITGSNAACTPDLVPGTCWDVIITPLGVDALRDWVAATAANSQYISVP
Ga0187785_100860221	3300017947	Tropical Peatland	MPRPQVAVILVMLSVSIACSPRDFLTRRLATDLVAGSDTFKTTQQFWLRTGVISNKDYSSPEYVVLRRRGWITGNNSPCPADITSPPCWDIVITPLGVDVLRDWVSATAAGSQYISVPVAQRELLSVTGIHKNGSLADVDFQWRW
Ga0187777_108765211	3300017974	Tropical Peatland	MQRRDAVFIFAALCFTVACSPRDFLTRRLATDLIAGSETFKMTQLFWLRTGVLSNKDFTSPEYLVLRRRGWITGNGTACAPDLIPPPCWDTVITPLGVDALRDW
Ga0187774_107861571	3300018089	Tropical Peatland	MPRWTISLLAAVLCAAVACSPRDFLTRRLATDLIAASDTFTTPQEFWLRTGITSNKDYFSPEYLLLQRRGWITAATVPCAPDVAPPPCWDVALTPLGVQT
Ga0193747_10044471	3300019885	Soil	MPRSQVAIIFVLLCLTVACSPRDFLTRRLATDLIAGSDTFKTTQQFWLRTGVISNKDYTSPEYVTLRRRGWITGNGVSCPPEIAFPPCWDMVITPLGVDALRDWVSATAASSQYMSVPVAQRELLAVTGIHKDGSQADVDFHWRWAAVNEVG
Ga0193729_12056201	3300019887	Soil	MFVLLGFTVACSPRDFLTRRLATDLIAGSDSFKTTQQFWLRTGVISNKDYTSPEYTMLRRRGWITGSGVSCPPEITSPPCWDMVITPLGVDALRDWVSATAASSQYISVPVAQRELLTVTGIHKNGNWADVDFQWRWSAVNEVGAALYAK
Ga0193735_10163493	3300020006	Soil	MPRSQVAIIFVLLCLTVACSPRDFLTRRLATDLIAGSDTFKTTQQFWLRTGVISNKDYTSPEYVTLRRRGWITGNGVSCPPEIAFPPCWDMVITPLGVDA
Ga0210407_109858491	3300020579	Soil	MRSRQTAFIFAVLCLTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYTSPEYLVLRRHGWITGSTAPCTPDLGVGPCWDVVITPLGVDALRDWVAATAATSQYISVPVAQRELVGLSGIRKNGSFADIDFQWRWAAVNEVGAALYAK
Ga0210407_114092071	3300020579	Soil	MRRRQAAFIFAMLCFTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNRDYTSPEYLVLRRHGWITASNAVCTPDLGLAPCWDVVITPLGVDALRDWVSATAASSQYISVPVAQRELLGLSGIRKNGNFADV
Ga0210401_104540632	3300020583	Soil	MRPRQAAFIFAMLCFTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNRDYTSPEYLVLRRHGWITASNAVCTPDLGLAPCWDVVITPLGVDALRDWVSATAASSQYISVPVAQRELLGLSGIRKN
Ga0210382_105288891	3300021080	Groundwater Sediment	PAILSCRAEALVWLQSPPRMSRPQVAIIFVLLCLSVACSPRDFLTRRLATDLIAGADSFKMTQQFWLRTGVISNKDYTSLEYVTLRRRGWITGNNAACTPEITSPPCWDIVVTPLGVDVLRDWVTATAASSQYISVPVAQRELLAVTGIHKGGTVADVDFQWRWAAVNEVGGA
Ga0210408_100769711	3300021178	Soil	MRRRQAAFIFAMLCFTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNRDYTSPEYLVLRRHGWITASNAVCTPDLGLAPCWDVVITPLGVDALRDWVSATAVSSQYISVPVAQRELLGLSGIRKNGNFADVDFQWRWAAVNEVGAAL
Ga0210402_101768413	3300021478	Soil	MRRRQAAFIFAMLCFTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNRDYTSPEYLVLRRHGWITASNAVCTPDLGLAPCWDVVITPLGVDALRD
Ga0210410_101689231	3300021479	Soil	MRRRQVAYIFALLCFTVACSPRDFLTRRLATDLIAGSDTFKMTQLFWLRTGAISSKDYTSPEYVVLRRRGWITGTSVACPPELAPPPCWDMVITPLGVDALRDWVAATAASSQYI
Ga0210410_114107611	3300021479	Soil	MRPRQAAFIFAMLCFTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYTSPEYLVLRRHGWITASNAVCTPDLGLAPCWDVVITPLGVDALRD
Ga0247680_10611391	3300024246	Soil	MRRRQAAFIFAVLCLTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYNSPEYLVLRRHGWITATGAACSADLGPAPCWDVVITPLGVDALRDWVAATAATSQYISVP
Ga0207697_104591722	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MRRRQAAFIFAVLCLTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYNSPEYLVLRRHGWITATGAACSADLGPAPCWDIVISPLGVDALRD
Ga0207656_102080811	3300025321	Corn Rhizosphere	MRRRQAAFIFAVLCLTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYNSPEYLVLRRHGWITATGAACSADLGPAPCWDIVISPLGVDALRDWVAATAATSQYISVPVAQRELLGLSGIRKNGNFADVDFQWRWAPVNEVGAALYANGT
Ga0207642_107269682	3300025899	Miscanthus Rhizosphere	MRPRQAAFIFAVLCLTVACSPRDFLTRRLATDLIAGSETFKMTQLFWLRTGVISNKDYTSPEYLVLRRHGWITATGAACSADLGPAPCWDVVITPLGVD
Ga0207680_100333601	3300025903	Switchgrass Rhizosphere	MRRRQAAFIFAVLCLTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYNSPEYLVLRRHGWITATGAACSADLGPAPCWDIVISPLGVDALRDWVAATAATSQYISVPVAQRELLGLSGIRKNGNFADVDFQWRWAPVN
Ga0207647_107409361	3300025904	Corn Rhizosphere	MRRRQAAFIFAVLCLTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYNSPEYLVLRRHGWITATSAACSADLGPAPCWDIVISPLGVDALRDWVAATAATSQYISVPVAQRELLGLSGIRKNG
Ga0207685_101567081	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MLRPRIAITLLVLCFAVACSPRDLLTRRLATDLIAGSDSFKTTQQFWLRTGIISSKDYSSSEYVTLRRRGWITGNNASCPPEIPAPACWDMV
Ga0207693_108880121	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MFVLLGFTVACSPRDFLTRRLATDLIAGSDSFKMTQQFWLRTGVISNKDYTSPEYTMLRRRGWITGSGVSCPPEITSPPCWDMVITPLGVDALRDWVSATAASSQYISVPVAQRELLTVTGIHKNGN
Ga0207649_109210721	3300025920	Corn Rhizosphere	MRRAQSAFIFIFISAILCITVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYTSPEYLVLRRHGWITGSNASCTPDLAPNPCWDVVITPLGVDALRDWVSATAASSQYISVPVAQREMLGLTGIRKNG
Ga0207700_100675531	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MLRPRIAITLLVLCFAVACSPRDLLTRRLATDLIAGSDSFKTTQQFWLRTGIISSKDYSSSEYVTLRRRGWITGNNASCPPEIPAPSCWDMVITPLGVDALRDWVSATAASSQYISVPVAQRELLAVTGIHRNGSVADVD
Ga0207665_104054232	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MFVLLGFTVACSPRDFLTRRLATDLIAGSDSFKMTQQFWLRTGVISNKDYTSPEYTMLRRRGWITGSGVSCPPEITSPPCWDMVITPLGVDA
Ga0207689_101064413	3300025942	Miscanthus Rhizosphere	MRRRQAAFIFAVLWLTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYNSPEYLVLRRHGWITATGAACSADLGPAPCWDIVISPLG
Ga0207712_105799962	3300025961	Switchgrass Rhizosphere	MRRRQAAFIFAVLCLTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYNSPEYLVLRRHGWITATGAACSADLGPAPCWDIVISPLGVDALRDWVAATAATSQYISVPVAQRELLGLSGIRKNGNFADVDFQ
Ga0207698_100288591	3300026142	Corn Rhizosphere	MRRRQAAFIFAVLCLTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYNSPEYLVLRRHGWITATGAACSADLGPAPCWDIVISPLGVDALRDWVAATAATSQYISVPVAQRELLGLSGIRKNGNFADVDFQWRWAPVNEVG
Ga0209863_101436041	3300026281	Prmafrost Soil	MLRKLSMTPFTRRKPFKLSYYLIFAMLCFTVACSPRDFLSRRLATDLIAGSETFKTTQLFWLRTGVISNKDYTSPEYLVLRRHGWITGSNAACTPDLGVAPCWDVVITPLGVDALRDWVAATAATSQY
Ga0209153_12495282	3300026312	Soil	MPRRQIALIFALLCSTTACSPRDFLTRRLATDLIAGSDTFKTTQVFWLRTGVLSSKDYSSSEYAAMRRHGWITGTGVSCPADLAPPCWDLVITPLGVD
Ga0209155_12488001	3300026316	Soil	MPRQQIGFIFALLCFTIACSPRDFLTRRLATDLIAGSDTFKTTQVFWLRTGVLSGKDYSSQEYATLRRHGWITGTGVSCPADLAPPCWDVVITPLGVDILRDWVNATAASSQYISVPVAQRELLAVTGIRRDGNVADVDFQWRW
Ga0257170_10628641	3300026351	Soil	MVRRHVALILALLCSTVACSPRDFLTRRLATDLIAGSDTFKMTQLFWLRTGVISNRDYSSPEYLVLRRHGWITGSGVPCPPDLAFPPCWDVVITPLGVDALRDWVAATAASSQYISVPVAQREMLGVTGIHRNENAADV
Ga0257180_10129352	3300026354	Soil	MVRRHVALILALLCSTVACSPRDFLTRRLATDLIAGSDTFKMTQLFWLRTGVISNRDYSSPEYLVLRRHGWITGSGVPCPPDLAFPPCWDVVITPLGVDALRDWVAATAASSQYISVPVAQREMLGVTGIHRNENAADVDFQWRWTAVNEVGA
Ga0257169_10197891	3300026469	Soil	MVRRHVALILALLCSTVACSPRDFLTRRLATDLIAGSDTFKMTQLFWLRTGVISNRDYSSPEYLVLRRHGWITGSGVPCPPDLAFPPCWDVVITPLGVDALRDWVAATAASSQYISVPVAQREMLGVTGIHRNENAAD
Ga0257172_11015861	3300026482	Soil	MLRPQVAIIFALLWLTVACSPRDFLTRRLATDLIAGSDSFKMTQQFWLRTGVISNKDYTSPEYVTLRRRGWITGSGVSCPPEITSPPCWDMVITPLGVDALRDWVSATAASSQYISVPVA
Ga0209701_102981101	3300027862	Vadose Zone Soil	MVRRHVALILALLCSTVACSPRDFLTRRLATDLIAGSDSFKVTQQFWLRTGVISNKDYTSPEYVTLRRRGWITGNNAACPAEIASPPCWDMVITPLGVDALRDWVSATAASSQYISVPVA
Ga0209590_101785141	3300027882	Vadose Zone Soil	MLRPQVAIIFALLWLTVACSPRDFLTRRLATDLIAGSDSFKMTQQFWLRTGVISNKDYASPEYVTLRRRGWITGSGVSCPPEITSPPCWDMVITPLGVDALRDWVSATAASSQYISVPVA
Ga0209583_106772091	3300027910	Watersheds	MPRRQVALILALLCSTVACSPRDFLTRRLATDLIAGSDTFKMTQLFWLRTGVISNKDYSSPEYLVLRRHGWITGSGVACPPDLAFPPCWDVVITPLGVDALRDWVAATAASSQ
Ga0209069_103286362	3300027915	Watersheds	VVLCLAVACSPRDFLTRRLAGDLIAGSDTFKLTQQFWLRTGVVSNRDYTSQEYLVLRRRGWITGGNVACPADITPGPCWDMVITPLGVDALRDWVAASAANSQY
Ga0268266_114187751	3300028379	Switchgrass Rhizosphere	MRRRHAAFIFIFAILCFTVACTPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYTSPEYLVLRRHGWITGSNASCTPDLAPNPCWDVVITPLGVDALRDWVSATAASSQYISVPVAQR
Ga0257175_10070611	3300028673	Soil	MVRRHVALILALLCSTVACSPRDFLTRRLATDLIAGSDTFKMTQLFWLRTGVISNRDYSSPEYLVLRRHGWITGSGVPCPPDLAFPPCWDVVITPLGVDALRDWVAATAASSQYISVPVAQREM
Ga0307476_109313652	3300031715	Hardwood Forest Soil	MRSRQAVFILAVLCSTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNQNYTSPEYVVLRRNGWITGSTASCTPDLGVAPCWDVVITPLGVDALRDWVSATA
Ga0310813_101281551	3300031716	Soil	MRRRQAAFIFAVLCLTVACSPRDLLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYNSPEYLVLRRHGWITATGAACSADLGPAPCWDIVISPLGVDALRDWVAATAAASQYISVP
Ga0307469_100489903	3300031720	Hardwood Forest Soil	MPRPQVVIVFVLLCLSVACSPRDFLTRRLATDLIAGSDSFKMTQQFWLRTGVISNTDYSSPEYVTLRRRGWIIGNNAACPPEITSPPCWDMVITPLGVDVLRDWVSATAASTQYISVPVAQRELLA
Ga0307469_102471151	3300031720	Hardwood Forest Soil	MRRRQAAFIFAVLCFTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYTSPEYLVLRRHGWITGTGTACSADLGPAPCWDVVITPLGVDALREWVAATAATSQYISVPVAQRELLGLSGIRKNGNFADVDFQWRWAAVNEV
Ga0307469_106957371	3300031720	Hardwood Forest Soil	MRPRQAAFIFAVLCLTVACSPRDFLTRRLATDLIAGSETFKMTQLFWLRTGVISNKDYTSPEYLVLRRHGWITATGAACSADLGPAPCWDVVITPLGVDALRDWVAATAATSQYISVPV
Ga0307469_108241881	3300031720	Hardwood Forest Soil	MPRPQVAIVFVLLCLTVACSPRDFLTRRLATDLIAGSDSFKMTQQFWLRTGVISNKDYTSPEYVTLRRRGWITGNNAACPPDIASPPCWDMVITPLGVD
Ga0310900_116194571	3300031908	Soil	MRRRQAAFIFAVLCLTVACSPRDFLTRRLATDLIAGSETFKTTQLFWLRTGVISNKDYNSPEYLVLRRHGWITATGAACSADLGPSPCWDVVISPLGVDALRDWVAATAATSQ
Ga0307471_1001979811	3300032180	Hardwood Forest Soil	MPRPQVVIVFVLLCLSVACSPRDFLTRRLATDLIAGSDSFKMTQQFWLRTGVISNTDYSSPEYVTLRRRGWIIGNNAACPPEITSPPCWDMVITPLGVDVLRDWVSATAASTQYISVPVAQRELLAVTGLHKDGSLAEVDFQWRWAAVNEVGAALYAK
Ga0307471_1023681501	3300032180	Hardwood Forest Soil	MRPRQAAFIFAVLCLTVACSPRDFLTRRLATDLIAGSETFKMTQLFWLRTGVISNKDYTSPEYLVLRRHGWITAAGAVCSADLGPAPCWDVVITPLGVDALRDWVAATAATSQYISVPV

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069257

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign