Metagenome Family F069249

Basic Information
Family ID	F069249
Family Type	Metagenome
Number of Sequences	124
Average Sequence Length	40 residues
Representative Sequence	PEHADDVAAKAMTSSSMQGNPVALSHDELKAILLQAL
Number of Associated Samples	108
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.19 %
% of genes from short scaffolds (< 2000 bps)	96.77 %
Associated GOLD sequencing projects	101
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Most Common Taxonomy
Group	Bacteria (70.161 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (34.677 % of family members)
Environment Ontology (ENVO)	Unclassified (33.065 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.774 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 36.92% β-sheet: 0.00% Coil/Unstructured: 63.08%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF09587	PGA_cap	12.10
PF01812	5-FTHF_cyc-lig	8.06
PF01169	UPF0016	5.65
PF09350	DJC28_CD	4.03
PF13302	Acetyltransf_3	3.23
PF08281	Sigma70_r4_2	2.42
PF09922	DUF2154	2.42
PF01513	NAD_kinase	2.42
PF00743	FMO-like	1.61
PF01202	SKI	1.61
PF00535	Glycos_transf_2	1.61
PF00196	GerE	1.61
PF00106	adh_short	1.61
PF13419	HAD_2	0.81
PF12867	DinB_2	0.81
PF01047	MarR	0.81
PF01544	CorA	0.81
PF01548	DEDD_Tnp_IS110	0.81
PF08376	NIT	0.81
PF00465	Fe-ADH	0.81
PF02133	Transp_cyt_pur	0.81
PF13560	HTH_31	0.81
PF01381	HTH_3	0.81
PF13549	ATP-grasp_5	0.81
PF01402	RHH_1	0.81
PF02771	Acyl-CoA_dh_N	0.81
PF01636	APH	0.81
PF01243	Putative_PNPOx	0.81
PF01738	DLH	0.81
PF04542	Sigma70_r2	0.81
PF00903	Glyoxalase	0.81
PF01042	Ribonuc_L-PSP	0.81
PF00491	Arginase	0.81
PF13412	HTH_24	0.81
PF12802	MarR_2	0.81
PF00294	PfkB	0.81
PF13191	AAA_16	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG0212	5-formyltetrahydrofolate cyclo-ligase	Coenzyme transport and metabolism [H]	8.06
COG2119	Putative Ca2+/H+ antiporter, TMEM165/GDT1 family	General function prediction only [R]	5.65
COG2072	Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD	Inorganic ion transport and metabolism [P]	1.61
COG0010	Arginase/agmatinase family enzyme	Amino acid transport and metabolism [E]	0.81
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.81
COG0337	3-dehydroquinate synthetase	Amino acid transport and metabolism [E]	0.81
COG0371	Glycerol dehydrogenase or related enzyme, iron-containing ADH family	Energy production and conversion [C]	0.81
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.81
COG0598	Mg2+ and Co2+ transporter CorA	Inorganic ion transport and metabolism [P]	0.81
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.81
COG1454	Alcohol dehydrogenase, class IV	Energy production and conversion [C]	0.81
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.81
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.81
COG1979	Alcohol dehydrogenase YqhD, Fe-dependent ADH family	Energy production and conversion [C]	0.81
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.81
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.16 %
Unclassified	root	N/A	29.84 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	70.16 %
Unclassified	root	N/A	29.84 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	70.16 %
Unclassified	root	N/A	29.84 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	62.90 %
Unclassified	root	N/A	29.84 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	61.29 %
Unclassified	root	N/A	29.84 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	43.55 %
Unclassified	root	N/A	29.84 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	0.81 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.84 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	20.16 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	3.23 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	3.23 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.81 %
Actinobacteria bacterium 13_2_20CM_2_71_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_2_71_6	0.81 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.81 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.81 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.81 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.84 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	16.94 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.23 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	3.23 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	2.42 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.81 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.81 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.81 %
unclassified Acidimicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales	0.81 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.81 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.81 %
Actinobacteria bacterium 13_2_20CM_2_71_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_2_71_6	0.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.84 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	16.94 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.23 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	2.42 %
Geodermatophilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	1.61 %
Micromonospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora	0.81 %
Streptosporangium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Streptosporangium	0.81 %
Acidimicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	0.81 %
Mycobacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium	0.81 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.81 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.81 %
Actinobacteria bacterium 13_2_20CM_2_71_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_2_71_6	0.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.84 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	16.94 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.23 %
unclassified Actinomadura	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura	2.42 %
unclassified Mycobacterium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium	0.81 %
unclassified Geodermatophilus	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → unclassified Geodermatophilus	0.81 %
Geodermatophilus amargosae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus amargosae	0.81 %
Micromonospora siamensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora siamensis	0.81 %
Streptosporangium subroseum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Streptosporangium → Streptosporangium subroseum	0.81 %
Acidimicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	0.81 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.81 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.81 %
Actinobacteria bacterium 13_2_20CM_2_71_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_2_71_6	0.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.84 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	16.94 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3.23 %
Actinomadura sp. 7K534	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura → Actinomadura sp. 7K534	2.42 %
Mycobacterium sp. ACS1612	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. ACS1612	0.81 %
Geodermatophilus sp. DSM 44511	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → unclassified Geodermatophilus → Geodermatophilus sp. DSM 44511	0.81 %
Geodermatophilus amargosae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus amargosae	0.81 %
Micromonospora siamensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora siamensis	0.81 %
Streptosporangium subroseum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Streptosporangium → Streptosporangium subroseum	0.81 %
Acidimicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	0.81 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.81 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.81 %
Actinobacteria bacterium 13_2_20CM_2_71_6	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_2_71_6	0.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.81 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10239312	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300005456\|Ga0070678_100600224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	983	Open in IMG/M
3300005547\|Ga0070693_101444004	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	536	Open in IMG/M
3300005602\|Ga0070762_10138174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1447	Open in IMG/M
3300006032\|Ga0066696_10629785	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	694	Open in IMG/M
3300006173\|Ga0070716_100576948	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	842	Open in IMG/M
3300006175\|Ga0070712_101831068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → unclassified Geodermatophilus → Geodermatophilus sp. DSM 44511	531	Open in IMG/M
3300006176\|Ga0070765_100766462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	912	Open in IMG/M
3300006797\|Ga0066659_10494374	All Organisms → cellular organisms → Bacteria	980	Open in IMG/M
3300006806\|Ga0079220_11698456	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M
3300009137\|Ga0066709_100449846	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → unclassified Mycobacterium → Mycobacterium sp. ACS1612	1801	Open in IMG/M
3300009137\|Ga0066709_101997486	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	804	Open in IMG/M
3300009520\|Ga0116214_1425433	Not Available	520	Open in IMG/M
3300009521\|Ga0116222_1122934	Not Available	1117	Open in IMG/M
3300009672\|Ga0116215_1180866	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_2_20CM_2_71_6	932	Open in IMG/M
3300009683\|Ga0116224_10420710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	636	Open in IMG/M
3300009824\|Ga0116219_10733129	Not Available	540	Open in IMG/M
3300010339\|Ga0074046_10277920	Not Available	1033	Open in IMG/M
3300010358\|Ga0126370_10679685	Not Available	901	Open in IMG/M
3300010358\|Ga0126370_12407449	Not Available	523	Open in IMG/M
3300010361\|Ga0126378_10601794	Not Available	1214	Open in IMG/M
3300010361\|Ga0126378_10604519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1211	Open in IMG/M
3300010361\|Ga0126378_10942931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	968	Open in IMG/M
3300010366\|Ga0126379_11455798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	791	Open in IMG/M
3300010373\|Ga0134128_10679571	Not Available	1144	Open in IMG/M
3300010376\|Ga0126381_102326815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	769	Open in IMG/M
3300010376\|Ga0126381_103064730	Not Available	663	Open in IMG/M
3300010379\|Ga0136449_100779764	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1584	Open in IMG/M
3300010396\|Ga0134126_12632632	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	546	Open in IMG/M
3300010398\|Ga0126383_11593098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	742	Open in IMG/M
3300010398\|Ga0126383_12399725	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300012211\|Ga0137377_11821444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus amargosae	528	Open in IMG/M
3300014968\|Ga0157379_10678808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	966	Open in IMG/M
3300016270\|Ga0182036_11122275	Not Available	652	Open in IMG/M
3300016294\|Ga0182041_10932975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	782	Open in IMG/M
3300016371\|Ga0182034_11312693	Not Available	631	Open in IMG/M
3300017924\|Ga0187820_1181576	Not Available	648	Open in IMG/M
3300017926\|Ga0187807_1055889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1224	Open in IMG/M
3300017926\|Ga0187807_1266073	All Organisms → cellular organisms → Bacteria → Proteobacteria	564	Open in IMG/M
3300017943\|Ga0187819_10058409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2291	Open in IMG/M
3300017955\|Ga0187817_10147645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1494	Open in IMG/M
3300017955\|Ga0187817_10632146	Not Available	683	Open in IMG/M
3300018001\|Ga0187815_10131763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1057	Open in IMG/M
3300018007\|Ga0187805_10638729	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	504	Open in IMG/M
3300018062\|Ga0187784_10218343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1554	Open in IMG/M
3300020583\|Ga0210401_11393727	Not Available	558	Open in IMG/M
3300021374\|Ga0213881_10305960	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300021403\|Ga0210397_10935964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	671	Open in IMG/M
3300021405\|Ga0210387_10315735	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1376	Open in IMG/M
3300021405\|Ga0210387_10359588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1287	Open in IMG/M
3300021420\|Ga0210394_10651389	Not Available	925	Open in IMG/M
3300021433\|Ga0210391_10523943	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	931	Open in IMG/M
3300021474\|Ga0210390_10399894	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1161	Open in IMG/M
3300021477\|Ga0210398_11433237	Not Available	539	Open in IMG/M
3300025898\|Ga0207692_10137295	Not Available	1387	Open in IMG/M
3300025898\|Ga0207692_10648114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	682	Open in IMG/M
3300025910\|Ga0207684_10263295	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1488	Open in IMG/M
3300025945\|Ga0207679_10440543	Not Available	1154	Open in IMG/M
3300026023\|Ga0207677_11046596	Not Available	742	Open in IMG/M
3300026552\|Ga0209577_10125870	All Organisms → cellular organisms → Bacteria	2045	Open in IMG/M
3300027096\|Ga0208099_1033992	Not Available	731	Open in IMG/M
3300027158\|Ga0208725_1070189	Not Available	511	Open in IMG/M
3300027504\|Ga0209114_1021676	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1047	Open in IMG/M
3300027517\|Ga0209113_1051824	Not Available	600	Open in IMG/M
3300027570\|Ga0208043_1203108	Not Available	500	Open in IMG/M
3300027696\|Ga0208696_1171077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	697	Open in IMG/M
3300027787\|Ga0209074_10364965	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	596	Open in IMG/M
3300027826\|Ga0209060_10108571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1296	Open in IMG/M
3300027889\|Ga0209380_10252640	Not Available	1035	Open in IMG/M
3300027895\|Ga0209624_10231806	Not Available	1227	Open in IMG/M
3300028381\|Ga0268264_11075305	Not Available	812	Open in IMG/M
3300028819\|Ga0307296_10295154	Not Available	883	Open in IMG/M
3300028906\|Ga0308309_10648837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	917	Open in IMG/M
3300029915\|Ga0311358_10799494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	676	Open in IMG/M
3300030706\|Ga0310039_10200702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Micromonospora → Micromonospora siamensis	785	Open in IMG/M
3300031525\|Ga0302326_10898599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1260	Open in IMG/M
3300031544\|Ga0318534_10872679	Not Available	504	Open in IMG/M
3300031573\|Ga0310915_11156192	Not Available	536	Open in IMG/M
3300031668\|Ga0318542_10109801	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1340	Open in IMG/M
3300031668\|Ga0318542_10217516	Not Available	966	Open in IMG/M
3300031668\|Ga0318542_10554154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	599	Open in IMG/M
3300031680\|Ga0318574_10233743	Not Available	1061	Open in IMG/M
3300031680\|Ga0318574_10727106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	582	Open in IMG/M
3300031723\|Ga0318493_10116371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1356	Open in IMG/M
3300031723\|Ga0318493_10127622	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1300	Open in IMG/M
3300031724\|Ga0318500_10664915	Not Available	530	Open in IMG/M
3300031747\|Ga0318502_10837839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	558	Open in IMG/M
3300031751\|Ga0318494_10130606	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1405	Open in IMG/M
3300031765\|Ga0318554_10150313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1322	Open in IMG/M
3300031770\|Ga0318521_10561598	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	689	Open in IMG/M
3300031778\|Ga0318498_10192343	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium	926	Open in IMG/M
3300031778\|Ga0318498_10212614	Not Available	876	Open in IMG/M
3300031782\|Ga0318552_10474945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura → Actinomadura sp. 7K534	638	Open in IMG/M
3300031793\|Ga0318548_10430043	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	647	Open in IMG/M
3300031796\|Ga0318576_10563553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	537	Open in IMG/M
3300031797\|Ga0318550_10637514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura → Actinomadura sp. 7K534	511	Open in IMG/M
3300031819\|Ga0318568_10540969	Not Available	726	Open in IMG/M
3300031820\|Ga0307473_10724250	Not Available	701	Open in IMG/M
3300031821\|Ga0318567_10501775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	689	Open in IMG/M
3300031860\|Ga0318495_10362136	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300031890\|Ga0306925_10252324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1901	Open in IMG/M
3300031896\|Ga0318551_10425064	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300031897\|Ga0318520_10639715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	663	Open in IMG/M
3300031910\|Ga0306923_10636483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1193	Open in IMG/M
3300031946\|Ga0310910_10141485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Streptosporangium → Streptosporangium subroseum	1833	Open in IMG/M
3300031954\|Ga0306926_12963277	All Organisms → cellular organisms → Bacteria → Terrabacteria group	508	Open in IMG/M
3300032009\|Ga0318563_10680411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	553	Open in IMG/M
3300032025\|Ga0318507_10137300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1040	Open in IMG/M
3300032039\|Ga0318559_10400105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura → Actinomadura sp. 7K534	640	Open in IMG/M
3300032063\|Ga0318504_10197238	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	939	Open in IMG/M
3300032065\|Ga0318513_10110164	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1294	Open in IMG/M
3300032066\|Ga0318514_10226766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	981	Open in IMG/M
3300032089\|Ga0318525_10431855	Not Available	675	Open in IMG/M
3300032090\|Ga0318518_10286375	Not Available	846	Open in IMG/M
3300032094\|Ga0318540_10622986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	520	Open in IMG/M
3300032160\|Ga0311301_10340067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2359	Open in IMG/M
3300032180\|Ga0307471_100949045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1027	Open in IMG/M
3300032770\|Ga0335085_10473670	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1435	Open in IMG/M
3300032770\|Ga0335085_11746086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	639	Open in IMG/M
3300032828\|Ga0335080_11879109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	583	Open in IMG/M
3300032892\|Ga0335081_10897883	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1045	Open in IMG/M
3300033158\|Ga0335077_10006138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	14818	Open in IMG/M
3300033475\|Ga0310811_10916176	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	788	Open in IMG/M
3300034163\|Ga0370515_0405573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	575	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.97%
Host-Associated	Host-Associated	4.03%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	89.52%
Aquatic	Environmental → Aquatic	6.45%
Plants	Host-Associated → Plants	4.03%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.10%
Freshwater	Environmental → Aquatic → Freshwater	6.45%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.42%
Peat	Environmental → Terrestrial → Peat	1.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.61%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	67.74%
Loam	Environmental → Terrestrial → Soil → Loam	12.90%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	6.45%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	6.45%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.61%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.61%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.81%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.81%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.81%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	41.13%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.97%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.06%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	6.45%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.84%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.03%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.61%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.61%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	34.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.06%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	8.06%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	6.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.84%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.84%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	4.03%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	3.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.61%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.61%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.61%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.81%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.81%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.81%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.81%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.81%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.81%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.81%
Exposed Rock	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Exposed Rock	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.81%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005602	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009824	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018001	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_5	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021374	Barbacenia macrantha exposed rock microbial communities from rupestrian grasslands, the National Park of Serra do Cipo, Brazil - ER_R08	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027096	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF043 (SPAdes)	Environmental	Open in IMG/M
3300027158	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF011 (SPAdes)	Environmental	Open in IMG/M
3300027504	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027517	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_RefH0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027696	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027826	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029915	III_Bog_E1 coassembly	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F069249

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_102393123	3300001867	Forest Soil	GDIATAAAQSSSMKGNPVTLSHADLVAIVHQAIG*
Ga0070678_1006002241	3300005456	Miscanthus Rhizosphere	FGIGPQHAGDVAAKAARSSSMQGNPVTLTPGDLRAIVLQAL*
Ga0070693_1014440042	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	IGPAEAGGIAARAAASSSMQGNPVSLTPGDLRAILLQSI*
Ga0070762_101381741	3300005602	Soil	ADEIAAKAMTSSSMQGNPVPLSHEDLRAALIQAL*
Ga0066696_106297853	3300006032	Soil	LAAFGIGPQHAEEIAAKAANSSSMQGNPVALSHADPQTILLQTVNHARFS*
Ga0070716_1005769482	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	GPGEADGIAAKAATSSSMQGNPVPLSHDELKAVVLQAL*
Ga0070712_1018310681	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	GLGPGEADGIAAKAATSSSMQGNPVPLSHDELKAVVLQAL*
Ga0070765_1007664623	3300006176	Soil	PEHADEIAAKAMTSSSMQGNPVPLSHEDLRAALIQAL*
Ga0066659_104943742	3300006797	Soil	AFGVGPQHVDDVAAKAARSSSMQGNPVALTHSDLRAIVLQAL*
Ga0079220_116984561	3300006806	Agricultural Soil	GNADDIAAKAMISSSMQGNPVPLSQGQLEAILLEAL*
Ga0066709_1004498464	3300009137	Grasslands Soil	AVPGLAAFGIGPQHAEEIAAKAANSSSMQGNPVALSHADPQTILLQTVNHACFS*
Ga0066709_1019974862	3300009137	Grasslands Soil	GLGSGQAGDIAAAAMTSSSMQGNPVSLSQGQLEAVFLEAL*
Ga0116214_14254331	3300009520	Peatlands Soil	TLTLAAVPCLGAFGNRPEEAGQIAAKALTSSRMQGNPFALSHGDLKAILLRAL*
Ga0116222_11229341	3300009521	Peatlands Soil	LAAFGLGPQDAGGIAAKALTSSSMQGNPVPLSRDDLEAILLRAL*
Ga0116215_11808662	3300009672	Peatlands Soil	HADEIAAKALTSSSMQGNPVALSHGDLKAILERAL*
Ga0116224_104207101	3300009683	Peatlands Soil	QHADEIAAKALTSSSMQGNPVALSHGDLKAILERAL*
Ga0116219_107331291	3300009824	Peatlands Soil	HADEIAAKALTSSSMQGNPVALSHGDLKAILLRAL*
Ga0074046_102779202	3300010339	Bog Forest Soil	GPQHADEIAAKALTSSSMLGNPVALSHDDLKAILQRAL*
Ga0126370_106796851	3300010358	Tropical Forest Soil	IGPQHADDVAVKALRSSSMQGNPVALSTGDLRAVLLRAI*
Ga0126370_124074491	3300010358	Tropical Forest Soil	SLATFGIKPEHADDFAAKAAVSSSMQGNPIALSRTELKAIVLQAL*
Ga0126378_106017941	3300010361	Tropical Forest Soil	GPQHADDVAAKALRSSSMQGNPVALSDGDVRAVLLRAI*
Ga0126378_106045193	3300010361	Tropical Forest Soil	LAAFGVGQQHADDVAAKAAGSSSMQGNPVALTHGDLRAIVLQAL*
Ga0126378_109429312	3300010361	Tropical Forest Soil	GPQHADDVAAKALRSSSMQGNPVALSASDLRAVLLEAI*
Ga0126379_114557981	3300010366	Tropical Forest Soil	LAAFGIGPQHAGDIAARAAGSSSMQGNPVALSHSDLIAAVRQAL*
Ga0134128_106795711	3300010373	Terrestrial Soil	GIGPQHAGDVAAKAARSSSMQGNPVTLTPGDLRAIFLQAL*
Ga0126381_1023268151	3300010376	Tropical Forest Soil	DAGDIAAKAARSSSMQGNPVPLDHGDLLAILRQAI*
Ga0126381_1030647302	3300010376	Tropical Forest Soil	GIGPEHADDIAAKAAVSSSMQGNPIALSRSELKAIVLQAR*
Ga0136449_1007797641	3300010379	Peatlands Soil	ADDIAAKALTSSSMQGNPVALTQAELKGILLQAL*
Ga0134126_126326321	3300010396	Terrestrial Soil	QAGDIAGKTARSSSMQGNPVPLTDEELRAIVLEAA*
Ga0126383_115930982	3300010398	Tropical Forest Soil	FGLGPQHADDVAAKAARSSSMQGNPVALTDSDLRAIVLQAL*
Ga0126383_123997252	3300010398	Tropical Forest Soil	AAFGLRPQHADDVAAKAARSSSMKGNPAALSRGDLRAIFLRAL*
Ga0137377_118214442	3300012211	Vadose Zone Soil	GPQHVDDVAAKAARSSSMQGNPVALTHSDLRAIVLQAL*
Ga0157379_106788083	3300014968	Switchgrass Rhizosphere	GLGPGQADDIAAKAATSSSMQGNPVPLSHDELKAVVLQAL*
Ga0182036_111222751	3300016270	Soil	GVRPEQADEAAAKAAKSSSMQGNPVVLSHDDLRAILLSAL
Ga0182041_109329752	3300016294	Soil	GLGPDNADEIAAKAITSSSMQGNPVSLSQDDLTAILLEAL
Ga0182034_113126932	3300016371	Soil	FGVRVQQADAIAAQAARSSSMQGNPVVLSHDDLRAILLSAL
Ga0187820_11815761	3300017924	Freshwater Sediment	QEVDDIAAKALVSSSMKGNPVPLSHADLTAILLQAL
Ga0187807_10558891	3300017926	Freshwater Sediment	PQHADEIAAKARTSSSMQGNPVALSHDDLKAALLRTL
Ga0187807_12660731	3300017926	Freshwater Sediment	GIQPQQADDIAAKAARSSSMQGNPVTLSPGDLRAILIQAI
Ga0187819_100584091	3300017943	Freshwater Sediment	RHAGEIAAKALLSSSMKGNPVPLSQADLEAILLQAL
Ga0187817_101476452	3300017955	Freshwater Sediment	LATSGVRPQHADEIAAKARTSSSMQGNPVALSHDDLKAALLRTL
Ga0187817_106321461	3300017955	Freshwater Sediment	LATSGVRPQHADEIAAKARTSSSMQGNPVALSHDDLKAALRRTL
Ga0187815_101317632	3300018001	Freshwater Sediment	PQHADEIAAKARTSSSMQGNPVALSHDDLKAALRRTL
Ga0187805_106387293	3300018007	Freshwater Sediment	EPQQAGEIAAKALVSSSMKGNPVPLSQADLEAILLQAL
Ga0187784_102183433	3300018062	Tropical Peatland	GLGPQHAGDIAAKALTSSSMQGNPVPLSHDDLEAILRQAL
Ga0210401_113937272	3300020583	Soil	LAAFGLVPPDADDIAAKALTSSSMKGNPVILSLADLEAVLIAAL
Ga0213881_103059601	3300021374	Exposed Rock	GQAGDIAAKAATSSSMQGNPVPLSHDELAAVVRQAV
Ga0210397_109359641	3300021403	Soil	LLAVPGLATFGVGPQHADEIAAKALTSSSMQGNPVALDHGDLKAILLLAL
Ga0210387_103157351	3300021405	Soil	PGLATFGVGPQHADEIAAKALTSSSMQGNPVALNHGDLKAILLLAL
Ga0210387_103595881	3300021405	Soil	PGLATFGVGPQHADEIAAKALTSSSMQGNPVALDHGDLKAILLLAL
Ga0210394_106513892	3300021420	Soil	RPQHADEIAAKALTSSSMQGNPVALSHGDLTAILQRAL
Ga0210391_105239431	3300021433	Soil	LGSEQADEIAAKAMTSSSMQGNPAVLSRDDLRAVLIQAL
Ga0210390_103998943	3300021474	Soil	RPGDVGEIAAAAARSSSMQGNPVLLSDDDLRAIVLAAL
Ga0210398_114332372	3300021477	Soil	AFGLSLQDVDDVAAKAAASSSMQGNPVVLSHDDLRTILLDAI
Ga0207692_101372953	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	AAFGIGPQHAGDVAAKAARSSSMQGNPVTLTPGDLRAIVLQAL
Ga0207692_106481142	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	TAAQAGDIAAKALTSSSMQGNPVPLSQDDLESIVLAAL
Ga0207684_102632953	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	PQHADDVAAKALRSSSMQGNPVALSAGDLRAVLLRAI
Ga0207679_104405433	3300025945	Corn Rhizosphere	LAAFGIGPQHAGDVAAKAARSSSMQGNPVTLTPGDLRAIFLQAL
Ga0207677_110465961	3300026023	Miscanthus Rhizosphere	SGVRPQHADDVAAKAAQSSSMQGNPVALSHADLRAIVLQAL
Ga0209577_101258703	3300026552	Soil	VPGLAAFGIGPQHADEIAAKAANSSSMQGNPVALSHADPQTILLQAVNHARSS
Ga0208099_10339922	3300027096	Forest Soil	GQIGDVAAKALTSSSMQGNPVPLSRDDLKAVLLQAL
Ga0208725_10701891	3300027158	Forest Soil	LAAFGLSLQDVDDVAAKAAGSSSMQGNPVVLSHDDLRTILLDAI
Ga0209114_10216763	3300027504	Forest Soil	LGLPDDIATAAAQSSSMKGNPVTLSHADLVAIVHQAIG
Ga0209113_10518242	3300027517	Forest Soil	AFGLRPQDAGGIATAAAQSSSMKGNPVTLSHADLVAIVHQAIG
Ga0208043_12031082	3300027570	Peatlands Soil	DADDIAAKALTSSSMQGNPVPLSHDDLMDIVLQAL
Ga0208696_11710771	3300027696	Peatlands Soil	PQHADEIAAKALTSSSMQGNPVALSHGDLKAILERAL
Ga0209074_103649651	3300027787	Agricultural Soil	GEADGIAAKAATSSSMQGNPVPLSHDELKAVVLQAL
Ga0209060_101085711	3300027826	Surface Soil	GPEQAGEIAAKALVSSSMKGNPVALSPADLEAALLQAL
Ga0209380_102526402	3300027889	Soil	PQDADDIAAKALTSSSMKGNPVILSLADLEAVLVAAL
Ga0209624_102318063	3300027895	Forest Soil	QDVGDVAAKAAASSSMQGNPVVLSDDDLRTILLDAI
Ga0268264_110753053	3300028381	Switchgrass Rhizosphere	GPQHAGDVAAKAARSSSMQGNPVTLTPGDLRAIFLQAL
Ga0307296_102951541	3300028819	Soil	PQHADDVAAKAAKSSSMQGNPVALSDSDLRAIFLQSL
Ga0308309_106488373	3300028906	Soil	PEHADEIAAKAMTSSSMQGNPVPLSHEDLRAALIQAL
Ga0311358_107994942	3300029915	Bog	GIRPEHADDVAVKAARSSSMQGNPVTLSHRDLRTILLQAI
Ga0310039_102007021	3300030706	Peatlands Soil	FGIRPQHADEIAAKALTSSSMQGNPVALSHGDLKAILERAL
Ga0302326_108985994	3300031525	Palsa	GLASFGLGSEQADEVAAKAMTSSSMQGNPAVLSRDDLRAVLIQAL
Ga0318534_108726792	3300031544	Soil	PGHADDVAAKAAVSSSMQGNPVSLSHDDLKAVFLRAL
Ga0310915_111561922	3300031573	Soil	FGLGPQHADDIAAKASVSSSMKGNPVALSHADLKAILLQAL
Ga0318542_101098013	3300031668	Soil	LGPGQADDIAAKAVRSGSMQGNPVTLSHDELQAIVLQAL
Ga0318542_102175162	3300031668	Soil	QQADDITAKALTSSSMKGNPVALSHADLKAILLQAL
Ga0318542_105541542	3300031668	Soil	FGLGPEDADDIAAKALTSSSMQGNPVALSQDDLTAIILEAL
Ga0318574_102337431	3300031680	Soil	GLASFGIRPQDAGEIAAKAATSSSMQGNPIPLETGELRAIVLQAL
Ga0318574_107271062	3300031680	Soil	DNADEIAAKAITSSSMQGNPVSLSQGDLTAILLEAL
Ga0318493_101163711	3300031723	Soil	GLAAFGLGPGQADDIAAKAMRSGSMQGNPVTLSHDELQAIVLQAL
Ga0318493_101276223	3300031723	Soil	ASFGIRPQDAADVAVKAAASSSMQGNPIPLETGELRAIVLQAL
Ga0318500_106649152	3300031724	Soil	IPSLATFGIKPEHAGDIAAKAAVSSSMQGNPIALSHSELKAIVLQAL
Ga0318502_108378391	3300031747	Soil	VSGLAAFGLGPGHADDVAAKAAVSSSMQGNPVSLSHDDLKAVFLRAL
Ga0318494_101306062	3300031751	Soil	EQADEIAAKAARSSSMQGNPVPLSGDELQAIVMAAI
Ga0318554_101503131	3300031765	Soil	QDADAMAAQAARSSSMQGNPVVLSHDDLRAILLSAL
Ga0318521_105615981	3300031770	Soil	GPEDADGIAAKALTSSSMQGNPVALSQGDLTAILLEAL
Ga0318498_101923431	3300031778	Soil	PQDAADVAVKAAASSSMQGNPIPLETGELRAIVLQAL
Ga0318498_102126141	3300031778	Soil	AAFGIGPQDADDIAAKAAVSSSMQGNPIALSHGELHAIVLEAL
Ga0318552_104749452	3300031782	Soil	EPEHADDVAAKAMTSSSMQGNPVALSHDELKAILLQAL
Ga0318548_104300432	3300031793	Soil	LGPDNADEIAAKAITSSSMQGNPVSLSQDDLTAILLEAL
Ga0318576_105635532	3300031796	Soil	DADGIAAKALTSSSMQGNPVALSQGDLTAILLEAL
Ga0318550_106375142	3300031797	Soil	SEHADDVAAKAMTSSSMQGNPVALSHDELKAILLQAL
Ga0318568_105409691	3300031819	Soil	RVQDAGDIAAKALTSSSMKGNPVPLSHADLKALLLQAL
Ga0307473_107242502	3300031820	Hardwood Forest Soil	LAAFGLGPEQAAEIAAQALVSSSMKGNPVALSVGNLRAILASAA
Ga0318567_105017751	3300031821	Soil	AAFGLGPGNADDIAAKAMTSSSMQGNPVALSHGDLKAVFLEAL
Ga0318495_103621361	3300031860	Soil	GLAAFGVRAEHADAIVAQAARSSSMQGNPVVLSHDDLRAILLSAL
Ga0306925_102523243	3300031890	Soil	DADDIAAKALTSSSMQGNPVALSQDDLTAIILEAL
Ga0318551_104250641	3300031896	Soil	GVRAEHADAIVAQAARSSSMQGNPVVLSHDDLRAILLSAL
Ga0318520_106397151	3300031897	Soil	LAAFGLGPGNADDIAAKAMTSSSMQGNPVALSHGDLKAIVLEAL
Ga0306923_106364831	3300031910	Soil	FGVRAEHADAIVAQAARSSSMQGNPVVLSHDDLRAILLSAL
Ga0310910_101414851	3300031946	Soil	GVRRDQADEIAAKAAKSSSMQGNPIALSDSDLRAIVLRAL
Ga0306926_129632772	3300031954	Soil	TFGLEPQHADDIAAKALVSSSMKGNPVALSHADLAEILLQAL
Ga0318563_106804111	3300032009	Soil	AAFGLGPDNADEIAAKAITSSSMQGNPVSLSQGDLTAILLEAL
Ga0318507_101373001	3300032025	Soil	PEHADDVAAKAMTSSSMQGNPVALSHDELKAILLQAL
Ga0318559_104001052	3300032039	Soil	GLGPEHADDVAAKAMTSSSMQGNPVALSHDELKAILLQAL
Ga0318504_101972381	3300032063	Soil	ASGLGPPQADDVATKAMASSSMKGNPVPLSHADLKAIFLQAL
Ga0318513_101101642	3300032065	Soil	VRAEHADAIVAQAARSSSMQGNPVVLSHDDLRAILLSAL
Ga0318514_102267662	3300032066	Soil	QADEIAAKAARSSSMQGNPVPLSGDELQAIVMAAI
Ga0318525_104318552	3300032089	Soil	FGIKPEDAEDVAAKAAVSSSMQGNPIALSRGELRAIVLQAL
Ga0318518_102863751	3300032090	Soil	LGPQLADDIAAKALTSSSMKGNPVALSHADLKAILLQAL
Ga0318540_106229863	3300032094	Soil	LAAFGVRRDQADEIAAKAAKSSSMQGNPVALSDSDLRTIVLRAL
Ga0311301_103400671	3300032160	Peatlands Soil	HADEIAAKALTSSSMQGNPVALSHGDLKAILLRAL
Ga0307471_1009490451	3300032180	Hardwood Forest Soil	AFGLGPGEADGIAAKAATSSSMQGNPVPLSHDELKAVVLQAL
Ga0335085_104736703	3300032770	Soil	GLAVFGLGPGNADDIAATAMTSSSMQGNPVALSHGDLTAVLLEAL
Ga0335085_117460861	3300032770	Soil	PGLAAFGLGPGNADDIAATAMTSSSMQGNPVALSHDDLTAILLEAL
Ga0335080_118791092	3300032828	Soil	AFGLGPANADDIAATAMTSSSMQGNPVALSHGDLTAVLLEAL
Ga0335081_108978831	3300032892	Soil	AASGIGPQHADDVAARAARSSSMQGNPVALSHSDLCAIVLQAL
Ga0335077_100061381	3300033158	Soil	EHTGDIAAKAARSSSMQGNPAALSDSDLRAIVLQAL
Ga0310811_109161761	3300033475	Soil	PGQADDIAAKAATSSSMQGNPVPLSHDELKAVVLQAL
Ga0370515_0405573_462_575	3300034163	Untreated Peat Soil	PEHADDVAVKAARSSSMQGNPVTLSHRDLRTILLQAI

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign