NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F069232

Metagenome Family F069232

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F069232
Family Type Metagenome
Number of Sequences 124
Average Sequence Length 67 residues
Representative Sequence LGALLIVVTDAPLPLLNVVAGVVYAIAMPFVALVTSYVYFDARTRLELEPVDDPDELPAEIQLSV
Number of Associated Samples 116
Number of Associated Scaffolds 124

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 91.13 %
% of genes from short scaffolds (< 2000 bps) 95.16 %
Associated GOLD sequencing projects 111
AlphaFold2 3D model prediction Yes
3D model pTM-score0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (75.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(17.742 % of family members)
Environment Ontology (ENVO) Unclassified
(26.613 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(48.387 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: No Secondary Structure distribution: α-helix: 49.46%    β-sheet: 0.00%    Coil/Unstructured: 50.54%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.53
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 124 Family Scaffolds
PF00005ABC_tran 14.52
PF00990GGDEF 3.23
PF08240ADH_N 3.23
PF00903Glyoxalase 2.42
PF02801Ketoacyl-synt_C 2.42
PF00378ECH_1 2.42
PF04239DUF421 2.42
PF11950DUF3467 2.42
PF03631Virul_fac_BrkB 1.61
PF104171-cysPrx_C 1.61
PF02148zf-UBP 1.61
PF01872RibD_C 1.61
PF13673Acetyltransf_10 1.61
PF01658Inos-1-P_synth 1.61
PF01546Peptidase_M20 1.61
PF00583Acetyltransf_1 1.61
PF03551PadR 1.61
PF14597Lactamase_B_5 1.61
PF00196GerE 1.61
PF03724META 1.61
PF07885Ion_trans_2 0.81
PF02515CoA_transf_3 0.81
PF02653BPD_transp_2 0.81
PF04402SIMPL 0.81
PF10009DUF2252 0.81
PF05448AXE1 0.81
PF02518HATPase_c 0.81
PF11655DUF2589 0.81
PF13632Glyco_trans_2_3 0.81
PF12681Glyoxalase_2 0.81
PF03706LPG_synthase_TM 0.81
PF08448PAS_4 0.81
PF13668Ferritin_2 0.81
PF00939Na_sulph_symp 0.81
PF00664ABC_membrane 0.81
PF08327AHSA1 0.81
PF03485Arg_tRNA_synt_N 0.81
PF10851DUF2652 0.81
PF00496SBP_bac_5 0.81
PF04960Glutaminase 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 124 Family Scaffolds
COG2323Uncharacterized membrane protein YcaP, DUF421 familyFunction unknown [S] 2.42
COG0262Dihydrofolate reductaseCoenzyme transport and metabolism [H] 1.61
COG5207Uncharacterized Zn-finger protein, UBP-typeGeneral function prediction only [R] 1.61
COG3187Heat shock protein HslJPosttranslational modification, protein turnover, chaperones [O] 1.61
COG1985Pyrimidine reductase, riboflavin biosynthesisCoenzyme transport and metabolism [H] 1.61
COG1846DNA-binding transcriptional regulator, MarR familyTranscription [K] 1.61
COG1733DNA-binding transcriptional regulator, HxlR familyTranscription [K] 1.61
COG1695DNA-binding transcriptional regulator, PadR familyTranscription [K] 1.61
COG1295Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)Function unknown [S] 1.61
COG1260Myo-inositol-1-phosphate synthaseLipid transport and metabolism [I] 1.61
COG1506Dipeptidyl aminopeptidase/acylaminoacyl peptidaseAmino acid transport and metabolism [E] 0.81
COG1804Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferasesLipid transport and metabolism [I] 0.81
COG1055Na+/H+ antiporter NhaD or related arsenite permeaseInorganic ion transport and metabolism [P] 0.81
COG2066GlutaminaseAmino acid transport and metabolism [E] 0.81
COG0471Di- and tricarboxylate antiporterCarbohydrate transport and metabolism [G] 0.81
COG2859Outer membrane channel-forming protein BP26/OMP28, SIMPL familyCell wall/membrane/envelope biogenesis [M] 0.81
COG2968Uncharacterized conserved protein YggE, contains kinase-interacting SIMPL domainFunction unknown [S] 0.81
COG0392Predicted membrane flippase AglD2/YbhN, UPF0104 familyCell wall/membrane/envelope biogenesis [M] 0.81
COG3458Cephalosporin-C deacetylase or related acetyl esteraseSecondary metabolites biosynthesis, transport and catabolism [Q] 0.81
COG3471Predicted secreted (periplasmic) proteinFunction unknown [S] 0.81
COG0018Arginyl-tRNA synthetaseTranslation, ribosomal structure and biogenesis [J] 0.81

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms75.00 %
UnclassifiedrootN/A25.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459017|G14TP7Y01CZOATAll Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium618Open in IMG/M
3300000956|JGI10216J12902_111034520All Organisms → cellular organisms → Bacteria841Open in IMG/M
3300002120|C687J26616_10263577All Organisms → cellular organisms → Bacteria527Open in IMG/M
3300004157|Ga0062590_100564889Not Available989Open in IMG/M
3300004480|Ga0062592_100685534Not Available888Open in IMG/M
3300004643|Ga0062591_101073914All Organisms → cellular organisms → Bacteria773Open in IMG/M
3300004643|Ga0062591_102913954All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300005180|Ga0066685_10440293All Organisms → cellular organisms → Bacteria → Terrabacteria group905Open in IMG/M
3300005328|Ga0070676_10647210All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria767Open in IMG/M
3300005329|Ga0070683_100638160All Organisms → cellular organisms → Bacteria1020Open in IMG/M
3300005332|Ga0066388_106607468All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia584Open in IMG/M
3300005332|Ga0066388_107176536Not Available560Open in IMG/M
3300005333|Ga0070677_10238251All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria897Open in IMG/M
3300005334|Ga0068869_100158454All Organisms → cellular organisms → Bacteria1761Open in IMG/M
3300005338|Ga0068868_100413333All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1166Open in IMG/M
3300005356|Ga0070674_100607941All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria924Open in IMG/M
3300005437|Ga0070710_10300118All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1048Open in IMG/M
3300005446|Ga0066686_10494763All Organisms → cellular organisms → Bacteria833Open in IMG/M
3300005450|Ga0066682_10681923All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia634Open in IMG/M
3300005526|Ga0073909_10522270Not Available577Open in IMG/M
3300005539|Ga0068853_102337821All Organisms → cellular organisms → Bacteria → Terrabacteria group518Open in IMG/M
3300005558|Ga0066698_10611513All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales733Open in IMG/M
3300005578|Ga0068854_101815107All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter radiotolerans559Open in IMG/M
3300005719|Ga0068861_101714454All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium621Open in IMG/M
3300005764|Ga0066903_101077154All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1479Open in IMG/M
3300005764|Ga0066903_103899810All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria801Open in IMG/M
3300005841|Ga0068863_102408205All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia536Open in IMG/M
3300006173|Ga0070716_101216289All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria606Open in IMG/M
3300006796|Ga0066665_10113879All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales2004Open in IMG/M
3300006806|Ga0079220_11881712All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae530Open in IMG/M
3300006844|Ga0075428_100131538All Organisms → cellular organisms → Bacteria2721Open in IMG/M
3300006845|Ga0075421_101636155All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria699Open in IMG/M
3300006852|Ga0075433_10723675All Organisms → cellular organisms → Bacteria871Open in IMG/M
3300009094|Ga0111539_11004899All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium970Open in IMG/M
3300009098|Ga0105245_10766216All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium UBA85431001Open in IMG/M
3300009101|Ga0105247_11264015All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium591Open in IMG/M
3300009137|Ga0066709_100439716All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1821Open in IMG/M
3300009156|Ga0111538_14011352All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300009177|Ga0105248_13067429Not Available532Open in IMG/M
3300009840|Ga0126313_10380953All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1116Open in IMG/M
3300010044|Ga0126310_10190715All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1339Open in IMG/M
3300010329|Ga0134111_10494827Not Available536Open in IMG/M
3300010398|Ga0126383_10322048All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1554Open in IMG/M
3300010399|Ga0134127_10222855All Organisms → cellular organisms → Bacteria1768Open in IMG/M
3300010403|Ga0134123_10563669Not Available1087Open in IMG/M
3300011400|Ga0137312_1014198All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1052Open in IMG/M
3300011412|Ga0137424_1002951All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1781Open in IMG/M
3300012208|Ga0137376_10515816All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1036Open in IMG/M
3300012885|Ga0157287_1105656All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia528Open in IMG/M
3300012899|Ga0157299_10197445All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium604Open in IMG/M
3300012916|Ga0157310_10084370All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia991Open in IMG/M
3300012951|Ga0164300_10488685Not Available700Open in IMG/M
3300012958|Ga0164299_10527206All Organisms → cellular organisms → Bacteria792Open in IMG/M
3300012958|Ga0164299_11049008All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria605Open in IMG/M
3300012987|Ga0164307_11577308All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia556Open in IMG/M
3300012988|Ga0164306_11278222All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria619Open in IMG/M
3300012989|Ga0164305_12130170All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia515Open in IMG/M
3300014267|Ga0075313_1231081All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium500Open in IMG/M
3300014325|Ga0163163_11943136All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria648Open in IMG/M
3300014965|Ga0120193_10004494All Organisms → cellular organisms → Bacteria1090Open in IMG/M
3300014965|Ga0120193_10020921All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium741Open in IMG/M
3300015372|Ga0132256_102544827All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium613Open in IMG/M
3300015373|Ga0132257_104049385All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Jiangella → Jiangella alba533Open in IMG/M
3300017937|Ga0187809_10149841Not Available806Open in IMG/M
3300018053|Ga0184626_10282957Not Available691Open in IMG/M
3300018058|Ga0187766_10783010All Organisms → cellular organisms → Bacteria → Terrabacteria group665Open in IMG/M
3300018067|Ga0184611_1291302Not Available569Open in IMG/M
3300018072|Ga0184635_10411263Not Available510Open in IMG/M
3300018073|Ga0184624_10384833All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium625Open in IMG/M
3300018082|Ga0184639_10261662All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia913Open in IMG/M
3300018433|Ga0066667_12189507All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Actinopolymorphaceae → Actinopolymorpha → Actinopolymorpha alba514Open in IMG/M
3300018469|Ga0190270_10063702All Organisms → cellular organisms → Bacteria2642Open in IMG/M
3300018469|Ga0190270_11908627Not Available651Open in IMG/M
3300019362|Ga0173479_10226464All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia807Open in IMG/M
3300020020|Ga0193738_1195161All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium505Open in IMG/M
3300022694|Ga0222623_10145465Not Available923Open in IMG/M
3300022756|Ga0222622_10860344All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia664Open in IMG/M
3300022901|Ga0247788_1021983All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1120Open in IMG/M
3300025313|Ga0209431_10898413All Organisms → cellular organisms → Bacteria635Open in IMG/M
3300025313|Ga0209431_11011681Not Available586Open in IMG/M
3300025326|Ga0209342_10421826All Organisms → cellular organisms → Bacteria1127Open in IMG/M
3300025327|Ga0209751_10482416All Organisms → cellular organisms → Bacteria1016Open in IMG/M
3300025917|Ga0207660_11515983All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia541Open in IMG/M
3300025926|Ga0207659_10655867Not Available897Open in IMG/M
3300025934|Ga0207686_11586035Not Available540Open in IMG/M
3300025945|Ga0207679_11883791All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria546Open in IMG/M
3300025972|Ga0207668_11248979Not Available668Open in IMG/M
3300026078|Ga0207702_11398883All Organisms → cellular organisms → Bacteria693Open in IMG/M
3300026088|Ga0207641_12351140All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia532Open in IMG/M
3300026089|Ga0207648_10324175All Organisms → cellular organisms → Bacteria1385Open in IMG/M
3300026538|Ga0209056_10195711All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1486Open in IMG/M
3300026540|Ga0209376_1326755All Organisms → cellular organisms → Bacteria → Terrabacteria group588Open in IMG/M
3300027277|Ga0209846_1046355Not Available672Open in IMG/M
3300027636|Ga0214469_1034280Not Available1638Open in IMG/M
3300027821|Ga0209811_10330446All Organisms → cellular organisms → Bacteria589Open in IMG/M
3300028587|Ga0247828_10912895All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia567Open in IMG/M
3300028589|Ga0247818_11014032Not Available587Open in IMG/M
3300028589|Ga0247818_11121441Not Available560Open in IMG/M
3300028592|Ga0247822_11338006All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia601Open in IMG/M
3300028596|Ga0247821_10813367Not Available617Open in IMG/M
3300028717|Ga0307298_10206127All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia580Open in IMG/M
3300028719|Ga0307301_10002150All Organisms → cellular organisms → Bacteria5524Open in IMG/M
3300028744|Ga0307318_10372958All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300028755|Ga0307316_10314834Not Available573Open in IMG/M
3300028796|Ga0307287_10392394All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium522Open in IMG/M
3300028802|Ga0307503_10279430Not Available829Open in IMG/M
3300028812|Ga0247825_11256793All Organisms → cellular organisms → Bacteria → Terrabacteria group541Open in IMG/M
3300028814|Ga0307302_10039147All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2195Open in IMG/M
3300029990|Ga0311336_10740806All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales844Open in IMG/M
3300030006|Ga0299907_11174679Not Available552Open in IMG/M
3300030294|Ga0311349_11709574Not Available582Open in IMG/M
3300030619|Ga0268386_10224652Not Available1394Open in IMG/M
3300031543|Ga0318516_10863681All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria510Open in IMG/M
3300031548|Ga0307408_101912399Not Available569Open in IMG/M
3300031724|Ga0318500_10276173All Organisms → cellular organisms → Bacteria819Open in IMG/M
3300031782|Ga0318552_10196675All Organisms → cellular organisms → Bacteria1019Open in IMG/M
3300031847|Ga0310907_10412463All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria706Open in IMG/M
3300031854|Ga0310904_11381969All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300032174|Ga0307470_11531820All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium555Open in IMG/M
3300032516|Ga0315273_12959592Not Available533Open in IMG/M
3300033521|Ga0316616_104268605All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria538Open in IMG/M
3300033551|Ga0247830_11493918All Organisms → cellular organisms → Bacteria540Open in IMG/M
3300034176|Ga0364931_0153973All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria741Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil17.74%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil7.26%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.45%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment4.03%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil4.03%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.03%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil3.23%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil3.23%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere3.23%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.42%
FenEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Fen2.42%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.42%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.42%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.42%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil1.61%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.61%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.61%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil1.61%
TerrestrialEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial1.61%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.61%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.61%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.61%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.61%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.61%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.61%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.81%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.81%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil0.81%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.81%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.81%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.81%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.81%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands0.81%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland0.81%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand0.81%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.81%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.81%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.81%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.81%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.81%
Switchgrass, Maize And Mischanthus LitterEngineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter0.81%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459017Litter degradation ZMR4EngineeredOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300002120Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004643Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3EnvironmentalOpen in IMG/M
3300005180Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134EnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005446Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135EnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005558Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147EnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009840Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105AEnvironmentalOpen in IMG/M
3300010044Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60EnvironmentalOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011400Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT133_2EnvironmentalOpen in IMG/M
3300011412Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT620_2EnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012885Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1EnvironmentalOpen in IMG/M
3300012899Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2EnvironmentalOpen in IMG/M
3300012916Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300014267Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D1EnvironmentalOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014965Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - T2EnvironmentalOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300017937Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4EnvironmentalOpen in IMG/M
3300018053Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1EnvironmentalOpen in IMG/M
3300018058Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MGEnvironmentalOpen in IMG/M
3300018067Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coexEnvironmentalOpen in IMG/M
3300018072Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2EnvironmentalOpen in IMG/M
3300018073Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1EnvironmentalOpen in IMG/M
3300018082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2EnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300020020Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a1EnvironmentalOpen in IMG/M
3300022694Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coexEnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300022901Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S156-409C-4EnvironmentalOpen in IMG/M
3300025313Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)EnvironmentalOpen in IMG/M
3300025326Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2 (SPAdes)EnvironmentalOpen in IMG/M
3300025327Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026538Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)EnvironmentalOpen in IMG/M
3300026540Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)EnvironmentalOpen in IMG/M
3300027277Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30 (SPAdes)EnvironmentalOpen in IMG/M
3300027636Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57 HiSeqEnvironmentalOpen in IMG/M
3300027821Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300028587Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3EnvironmentalOpen in IMG/M
3300028589Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1EnvironmentalOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300028596Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14EnvironmentalOpen in IMG/M
3300028717Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158EnvironmentalOpen in IMG/M
3300028719Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182EnvironmentalOpen in IMG/M
3300028744Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367EnvironmentalOpen in IMG/M
3300028755Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356EnvironmentalOpen in IMG/M
3300028796Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141EnvironmentalOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300028812Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48EnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300029990I_Fen_N2 coassemblyEnvironmentalOpen in IMG/M
3300030006Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67EnvironmentalOpen in IMG/M
3300030294II_Fen_E3 coassemblyEnvironmentalOpen in IMG/M
3300030619Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)EnvironmentalOpen in IMG/M
3300031543Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20EnvironmentalOpen in IMG/M
3300031548Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3Host-AssociatedOpen in IMG/M
3300031724Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20EnvironmentalOpen in IMG/M
3300031782Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20EnvironmentalOpen in IMG/M
3300031847Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4EnvironmentalOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031902Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032516Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0EnvironmentalOpen in IMG/M
3300033521Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_BEnvironmentalOpen in IMG/M
3300033551Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5EnvironmentalOpen in IMG/M
3300034176Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
4ZMR_051807602170459017Switchgrass, Maize And Mischanthus LitterLLILGTDAPLPLLNVVAGVVYALAMPFVALTTTYVYLDARARVELEPYDRRAELPPDVDLATG
JGI10216J12902_11103452033300000956SoilLILLSDAPLALLNVVAGIVYGLAMPFVSLTSAYVYFDVRTRFELEPVESTELPAEIQLAR
C687J26616_1026357723300002120SoilLFGALLILFTEVPLALLNVAAGVVYALAMPFVALTTAYVYFDARVRRELGTDEVPAVLPSEIELESSSTIARA*
Ga0062590_10056488923300004157SoilLILGTGAPLALLDIVAGVVYALTMPFVALMTAYVYFDARVRAELEPDPGIAELPAEIELYSP*
Ga0062592_10068553423300004480SoilGPVLGTLLILATDLPLALLNLVAGVVYAAAMPFVALTTTYVYFDARTRHELEPEEEPDELPAELGTLTA*
Ga0062591_10107391433300004643SoilGALLILVTEAPFALMNVLAGIVYALAMPFVALVTTFLYFDARVRQELPAEGDPDELPAEIAI*
Ga0062591_10291395413300004643SoilLLGALLILLTNAPLALMNIVAGLVYAAAMPFVALATTYVYLDARVRETLEPETRPERLPAEIELSV*
Ga0066685_1044029323300005180SoilVRGPPHGPTFPIVLLLGALLILLTDASLPLLNIVAGVVYALAMPFVALATTYVYVREELAPEPGPHGLPVEIELA*
Ga0070676_1064721013300005328Miscanthus RhizosphereAILIFVTDAPLGLLNIVAGIVYALAMPFVALVTAYVYFDMRARFELEPRESVSELPAEIALES*
Ga0070683_10063816023300005329Corn RhizosphereLVLALGPLVGALLIFLTDAPLALLNVVAGIVYALAMPFVAIATTYVYFDTRVRAALETEAPSDLPAEIELA*
Ga0066388_10660746813300005332Tropical Forest SoilAGPLLGAILIFLTNAPLALVNVVAGVVYVLTMPFVALTTTYVYFDARVRNELEPELELGPLPAELELDAPTAGTHPATEHG*
Ga0066388_10717653623300005332Tropical Forest SoilPLLGAILIFLTDTPLALVNVVAGIVYALAIPFVALTTTYVYFDARVRKELGPELDALPAEVELGTALRPATRPATEHG*
Ga0070677_1023825133300005333Miscanthus RhizosphereALIFLTSMPFALLNIVAGVVYALSLPFVALVTGYVYFDARTRGELEPAQPSELPAEIELATS*
Ga0068869_10015845433300005334Miscanthus RhizosphereLLILVTDAPPVLLNVIAGVVYALAMPFVALTTAYVYFDRRTRSELEPERESHPSELPAEIQLSG*
Ga0068868_10041333323300005338Miscanthus RhizosphereLIFLTDLPLAMLNIVAGVVYALAMPFVALVTAYVYFDARARFELEPVERVDQLPSEIALDGV*
Ga0070674_10060794113300005356Miscanthus RhizospherePLLGAILIFLTDLPLAMLNIVAGVVYALAMPFVALVTAYVYFDARARFELEPVEDVDELPSEIALDRA*
Ga0070710_1030011833300005437Corn, Switchgrass And Miscanthus RhizosphereIALFLGPFVGALLILVTHAPLALMNIVAGLVYALTMPFVCLVTTYVYFDVRAREELEREEEAPEVLPAEIALPTSG*
Ga0066686_1049476333300005446SoilLILLTDASLPLLNIVAGVVYALAMPFVALATTYVYVDARVREELAPEPGPHGLPAEIELA
Ga0066682_1068192313300005450SoilVPLLGALLILLTDASLPLLNIVAGVVYALAMPFVALATTYVYVDARVREELAPE
Ga0073909_1052227013300005526Surface SoilLLGALLIFATDAPLALLNIVAGVVYALAMPFVALTTTYVYFDARVKVALAPRGEALLPAEIELGEPAV*
Ga0068853_10233782123300005539Corn RhizosphereLIFATSAPLPLLNIVAGIVYALAMPFVALTTSYAYFDVRARAELEQEDETPRVLPAEIALTTSPRS*
Ga0066698_1061151323300005558SoilVRGPPDGPTFPIVLLLGALLILLTDASLPLLNIVAGVVYALAMPFVALATTYVYVDARVREELAPEPGPHGLPAEIELA*
Ga0068854_10181510713300005578Corn RhizosphereGPLVGALLILLTDWPLPILNLIAGVVYALSMPFVALATSYVYFDARVRAELEPREAPAELPAEIELSRG*
Ga0068861_10171445413300005719Switchgrass RhizosphereLLGALLILGTGAPLALLDLVAGVVYALAMPFVALTTAYVYFDARVRAELQPDPGVGELPAEIDFASP*
Ga0066903_10107715423300005764Tropical Forest SoilGALLILLTSAPLTLLNVVAGVVYALSMPFVALATSYVYFDLRVRHELADHPRPAVLPAEINLSV*
Ga0066903_10389981013300005764Tropical Forest SoilIGLVLALAIGPLIGALLIILTHAPFALLNIVSGIVYALAMPFVAITTTYVYFDARVRSVLEPGGAPADLPAEIELA*
Ga0068863_10240820523300005841Switchgrass RhizosphereIVLTDTPLAFLNIVAGVVYALAMPFVALVTAYVYFDARARLELEPAERVSELPAEIQLDAPA*
Ga0070716_10121628913300006173Corn, Switchgrass And Miscanthus RhizospherePLLGTIMILVTDAPLSLLNIVAGVVYALAMPFVALTTSFVYFDARARDELERTPAPAILPAEIALHG*
Ga0066665_1011387923300006796SoilVRGPPHGPTFPIVLLLGALLILLPDASLPLLNIVAGVVYALAMPFVALATTYVYVDARVREELAPEPGPHGLPAEIELA*
Ga0079220_1188171213300006806Agricultural SoilIIVTHAPFVLLNIVAGIVYALAMPFVAITTTYVYFDARVRRELEPLEAPADLPAEIELAAH*
Ga0075428_10013153843300006844Populus RhizosphereLGAILIFLTDMPLATLNIVAGVVYALAMPFVALVTAYVYFDARARLELEPVERISELPREISLEAAT*
Ga0075421_10163615523300006845Populus RhizosphereIFATEMPLALLNVVAGVVYALAMPFVALVTAYVYFDARARLELEPVERVTELPSEISLEPAS*
Ga0075433_1072367533300006852Populus RhizosphereLAVGPFLGALLILLSDAPLALLNVVAGIVYGLAMPFVSLTSAYVYFDVRTRFELEPVESTELPAEIQLAR*
Ga0111539_1100489923300009094Populus RhizosphereALLILVTDAPPALLNVVAGVVYALAMPFVALTTAYVYFDRRTRLELEPERASHPSELPAEIQLS*
Ga0105245_1076621633300009098Miscanthus RhizosphereLLGVALIFTTNVPFVLLNVVAGVVYTLAFPFVGLVTAYVYFDARVREALEPAPERARELPPEIELGRA*
Ga0105247_1126401513300009101Switchgrass RhizosphereAPLSLLNVVAGVVYALAMPFVALTTSYAYFDVRARAELEQEDETPRVLPAEIALTTSR*
Ga0066709_10043971623300009137Grasslands SoilVLLLGALLILLTDASLPLLNIVAGVVYALAMPFVALATTYVYVDARVREELAPEPGPHGLPAEIELA*
Ga0111538_1401135213300009156Populus RhizosphereLILVTTVPLALLNIVSGIVYALAMPFVALTTAYVYFDARVRAELEPRDTPAAPAELPAEIDLPDVVRGGGR*
Ga0105248_1306742923300009177Switchgrass RhizosphereLAAGPLLGALLILLTGAPLALLDLVAGVVYALAMPFVALTTAYVYFDARVRAELEPDPGVAELPAEIDFASP*
Ga0126313_1038095323300009840Serpentine SoilLALVAGPLLGALLIFGTGAPLALLDIVAGVVYALAMPFVALTTAYVYFDARVRAELEPRPGPSELPAEIELV*
Ga0126310_1019071513300010044Serpentine SoilLIFATGAPLALLEIVAGVVYALAMPFVALTTAYVYFDARVRTELEPPPEPIELPAEIDLV
Ga0134111_1049482723300010329Grasslands SoilVTDAPLPLLNVVAGVVYALAMPFVALTTTYAYFDARVRHELADDVRPGVLPAEIELSV*
Ga0126383_1032204833300010398Tropical Forest SoilVASIVGIGSVIALGAGPLLGALLILVTEAPLALMNVVAGVVYALAMPFVALATSYVYFDARARTQLEQSRVTGDLPAEYELSTT*
Ga0134127_1022285533300010399Terrestrial SoilFLLILLTNAPLSTLNLVAGVVNAVTMPFVALTTAYVYFDARARVELEPAEEPDQLPAEFQLSG*
Ga0134123_1056366913300010403Terrestrial SoilTLLIVLTSAPLATLNLVAGVLNAVTIPFVALTTAYVYFDVRARAELETVEEADELPAEFQLSG*
Ga0137312_101419833300011400SoilGPFLGALLILVTSAPPAWLNLVSGIVHALALPFVALTTCYVYFDARTRRELEAADEPRELPAEIQI*
Ga0137424_100295143300011412SoilAGPLIGALLILLTSAPLALLNIVAGVVYALAAPFVALTTAYVYFDARVRDELAPEPELDELPAEIQLST*
Ga0137376_1051581623300012208Vadose Zone SoilVLLLGALLILLTDASLPLLNIVAGVVYALAMPFVALATTYVLVDARVREELAPEPVPHGLPAEIELA*
Ga0157287_110565623300012885SoilILIFLTDLPLAMLNIVAGVVYALAMPFVALVTAYVYFDARARFELEPVERVDQLPSEIALDGV*
Ga0157299_1019744513300012899SoilLTNAPLALLNVVAGIVYALAMPFVALTGSYVYFDSRVREELEQEEAPPLLPAEIALG*
Ga0157310_1008437023300012916SoilLIFVTDLPLATLNLVAGVVYALAMPFVALVTAYVYFDARTRFELDPIEHVSELPQEIALDAAP*
Ga0164300_1048868523300012951SoilVGAGALIVLVLGPFLGALLIVLTSAPLALMNIVAGVVYALTMPFVAITAVYVYFDRRVASDLAGDVPPAELPAEIEVTGWSHAG*
Ga0164299_1052720613300012958SoilLAAGPLLGALLIVLTDAPLPLLNVVAGVVYALAMPFVALATGYVYFDARTRDELRLERAPAVLPAEISLAG*
Ga0164299_1104900823300012958SoilLGAVLIILTQAPFVLLNVVSGIVYALAMPFVAITTTYVYFDARVRSELEPREAPADLPAEIELAAH*
Ga0164307_1157730823300012987SoilAILIFVTDAPLGLLNVVAGVVYALAMPFVALVTGYTYFDTRARHELEPVTRVTELPAEISLEQL*
Ga0164306_1127822223300012988SoilFLGAVLILVTDAPLALMNVVAGIVYALAMPFVALTTSYAYFDVRVREELEREDAPAILPAEIAYSAPEARA*
Ga0164305_1213017023300012989SoilLIFTTDVPLAFLNVVAGVVYALAMPFVALVTAYVYFDGRARFELEPRKRVSELPAEIALEA*
Ga0075313_123108123300014267Natural And Restored WetlandsGGLALALGPLLGALLIVVSDAPFALLNIVAGLVYVVALPFVALTTAYVYFDRRVRHELAPEPEPKVLPAEIELVT*
Ga0163163_1194313613300014325Switchgrass RhizosphereLVGVGLVLVLALGPLVGALLIFLTDAPLALLNVVAGIVYALAMPFVAIATTYVYFDTRVRAALETEAPSDLPAEIELA*
Ga0120193_1000449413300014965TerrestrialLLIFWTDAPLPLLNIVAGVVYGLAMPFVALVTAYVYFDARTRHELEPADERDELPAEIQLSG*
Ga0120193_1002092123300014965TerrestrialVTDAPLALLNVVAGVVYAIAMPFVALVTTYVYFDVRTRHELEPADEPDELPAEIQLSA*
Ga0132256_10254482723300015372Arabidopsis RhizosphereMSIGGPPEVLTYAPFAVLNIVAGVVYALAMPFVALTSSYVYFDARVREELEQEEAPPALPAEIALG*
Ga0132257_10404938513300015373Arabidopsis RhizosphereALGPLLGVALIFLTDAPLALLNLVAGLVYALTLPYVAIVTAYVYFDARTRVELEPAEQPSELPAEIELGPA*
Ga0187809_1014984123300017937Freshwater SedimentVLILLTHAPLALLNIVAGVVYALALPYVALATGYAYFDARTRDQLDEEHPLTMLPTEIALTG
Ga0184626_1028295713300018053Groundwater SedimentPFIGALLILLTDAPLALLNVVAGVVYALTMPFVALMTAYVYFDSRVRAELEPRDAPGEVPAEIELSSG
Ga0187766_1078301023300018058Tropical PeatlandGALLILLTHAPLALLNVVAGIVYALALPYVALATSYAYFDARTRDQLDREHADAVLPAEIALTS
Ga0184611_129130223300018067Groundwater SedimentLILLTGAPLEVLNLVAGIVYSLAMPFVALTTSYVYFDARTRIELEPADEPDRIPAEIQFNSS
Ga0184635_1041126313300018072Groundwater SedimentASLVGLGALLSIGVGPLLGALLIFGTSAPLALLNVIAAVVYALAIPFLALVTAYVYFDARVRNELESDDTAGELPAEIEISPA
Ga0184624_1038483323300018073Groundwater SedimentLGALLILLTDAPPALLNVVAGVVYALAMPFVALTTAYVYFDRRTRLELEPEPESHPSELPAEIRLTS
Ga0184639_1026166213300018082Groundwater SedimentLLGAILIFLTDAPLALLNVFAGLVYALAMPFVALVTGYVYFDARARVELEPVERVSELPAEIQLQPAL
Ga0066667_1218950713300018433Grasslands SoilLGALLILLTDASLPLLNIVAGVVYALAMPFVALATTYVYVREELAPEPGPHGLPVEIELA
Ga0190270_1006370223300018469SoilVIPLAVGTLLGTLLILATEAPLALANVVAGVINALAMPFVALTTSYLYFDARARLELETEGEPGELPPEISLSAP
Ga0190270_1190862723300018469SoilALVLGPLFGTLLIILTSAPLATLNLVAGVVNAVTMPFVALTTAYVYFDARARLELEPADEPGELPAEFQLSG
Ga0173479_1022646423300019362SoilPLLGAILIFLTDLPLAMLNIVAGVVYALAMPFVALVTAYVYFDARARFELEPVERVDQLPSEIALDGV
Ga0193738_119516113300020020SoilFLGALLILLTSAPPAWLNLVSGIVHALALPFVALTTCYVYFDARTRRELDGADEPRELPAEIQI
Ga0222623_1014546513300022694Groundwater SedimentAGPLAGTLLIFATSLPFTFLNLVAGIVYAVALPFVALTTVYVYFDTVVRERLEGDSAPDELPAEIPLPAGS
Ga0222622_1086034413300022756Groundwater SedimentAILIFLTDAPLALLNVFAGLVYALAMPFVALVTGYVYFDARARVELEPVADLSELPAEIQLQPTL
Ga0247788_102198333300022901SoilLTNAPLALLNIVAGIVYALAMPFVALTSSYVYFDARVREELEQEEAPPVLPAEIALG
Ga0209431_1089841323300025313SoilGALLIVLTTAPLSLLNIVAGVVYAVTMPFVTLTTSYVYFDARSRDALEPEDEPDELTAEIELSA
Ga0209431_1101168113300025313SoilPLFGALLILLTSTPLTLLNLVAAVVYAVAMPFVALTTAYVYFDTRVRDELVEESEPDELPAEIQLSV
Ga0209342_1042182613300025326SoilTEVPLALLNVAAGVVYALAMPFVALTTAYVYFDARVRRELGTDEVPAVLPSEIELESSSTIARA
Ga0209751_1048241613300025327SoilVAGPLFGALLILFTEVPLALLNVAAGVVYALAMPFVALTTAYVYFDARVRRELGTDEVPAVLPSEIELESSSTIARA
Ga0207660_1151598313300025917Corn RhizosphereTDLPLAMLNIVAGVVYALAMPFVALVTAYVYFDARARFELEPVEDVDELPSEIALDRA
Ga0207659_1065586723300025926Miscanthus RhizosphereLLGAVLIFVTDAPLGLLNIVAGIVYALAMPFVALVTAYVYFDARARLELEPRDARTELPAEISVEPV
Ga0207686_1158603523300025934Miscanthus RhizosphereLILLTDAPLPLLNLVAGVVYALAMPFVALMTTYVYFAARVRKELEPAPLETLPAEIATVA
Ga0207679_1188379123300025945Corn RhizosphereALAIGPFVGALLIIVTQAPFALLNVVSGIVYALAMPFVAITTTYVYFDARVRDALEPQDEPADLPAEIELA
Ga0207668_1124897913300025972Switchgrass RhizosphereGTMLIVLTSAPLATLNLVAGVLNAVTIPFVALTTAYVYFDVRARAELETADEPDALPAEFQLSG
Ga0207702_1139888323300026078Corn RhizospherePLLGALLIFVTDAPLALLNVVAGVVYALAMPFVALTTTYVYLDARVKVALAPRGEALLPAEIELAG
Ga0207641_1235114013300026088Switchgrass RhizosphereLGAILIVLTDTPLAFLNIVAGVVYALAMPFVALVTAYVYFDARARLELEPAERVSELPAEIQLDAPA
Ga0207648_1032417523300026089Miscanthus RhizospherePFLGALLILLTDAPPALLNVIAGVVYALAMPFVALTTAYVYFDRRTRLELEPERESHPSELPAEIQLTS
Ga0209056_1019571123300026538SoilVRGPPHGPTFPIVLLLGALLILLTDASLPLLNIVAGVVYALAMPFVALATTYVYVDARVREELAPEPGPHGLPAEIELA
Ga0209376_132675513300026540SoilLLGALLILLTDASLPLLNIVAGVVYALAMPFVALATTYVYVREELAPEPGPHGLPVEIEL
Ga0209846_104635523300027277Groundwater SandALLILLTDAPLALLNIVAGVVYALTMPYVALVTTYVYLDSRVRAELEPRDATGELPAEIELSSG
Ga0214469_103428013300027636SoilGPVLGAVLILATALPLGISNVVAGVVLALAMPFVALTTSYVYFDARTRAELDAIDEPGELPAEIALAP
Ga0209811_1033044623300027821Surface SoilGVGAVITIAAGPLLGALLIFVTDAPLALLNVVAGVVYALAMPFVALTTTYVYFDARVKVALAPRGEALLPAEIELGEPAV
Ga0247828_1091289523300028587SoilLGAIMIFVTEAPLALLNVFAGVVYALAMPFVALVTSYVYFDSRARLELEPFEQVSELPAEFELAR
Ga0247818_1101403213300028589SoilLIFVTDAPLALLNVVAGVVYALAMPFVALVTSYVYVDARARGELERREAYGELPAEIRLSSARIR
Ga0247818_1112144123300028589SoilVLLIVVSDAPLWLVNVVAGVVYAIAMPFLALMTAYVYFDVRVRDEFAPRSSTELPAEIELARAT
Ga0247822_1133800623300028592SoilIFVTEAPLALLNVFAGVVYALAMPFVALVTSYVYFDSRARLELEPFEQVSELPAEIELAR
Ga0247821_1081336713300028596SoilLGAVLILLTDAPLPIMNVVAGVVYALAMPLVALTTTYVYVDARVREELEPALLETLPPEIDLSAAARGS
Ga0307298_1020612723300028717SoilTDAPLALLNLFAGLVYALAMPFVALVTGYVYFDARARVELEPVADLSELPAEIQLQPTL
Ga0307301_1000215013300028719SoilFATSAPLALLNLVAGVVYALAMPFVALVTSYVYFDSRVRDELEPLDTPTELPAEVDVSISKG
Ga0307318_1037295823300028744SoilLALVAGPFLGALLIFATGAPLALLDIVAGVVYALAMPFVALTTAYVYFDARVRTELEPRPGPSELPAEIELGRP
Ga0307316_1031483413300028755SoilLLIFATSAPLALLNLVAGVVYALAMPFVALVTSYVYFDSRVRDELEPLDTPTELPAEVDLSLSKG
Ga0307287_1039239413300028796SoilFLGAVLILLTSAPPAWLNLVSGIVHALALPFVALTTSYVYFDARTRHELEAADEPRELPAEIQI
Ga0307503_1027943013300028802SoilLILLTNAPLSTLNLVAGVVNAVTMPFVALATAYVYFDARARVELEPAEEPDQLPAEFQLS
Ga0247825_1125679313300028812SoilVMIFVTAAPLALLNIVAGIVYALAMPFVALVTTYVYVDARARGELEPRAEPGPLPAEISLSSG
Ga0307302_1003914743300028814SoilGPFLGALLILLTSAPPAWLNLVSGIVHALALPFVALTTCYVYFDARTRRELEAADEPRELPAEIQI
Ga0311336_1074080633300029990FenAFVALAAGPLIGVALIFTTNMPFVLLNVVAGVVYTLLLPFVALVTSYVYVDARVHGELEPADMPSELPAEIAL
Ga0299907_1117467923300030006SoilLILATALPLGISNVVAGVVLALAMPFVALTTSYVYFDARTRAELDAIDEPGELPAEIALA
Ga0311349_1170957413300030294FenAGPLLGVALIFTTSVPLAFLNVVAGMVYALALPFVALVTAYVYFDARVRGELEPSDQPSELPAEIELGPTVSGQS
Ga0268386_1022465223300030619SoilLATALPLGISNVVAGVVLALAMPFVALTTSYVYFDARTRAELDAIDEPGELPAEIALAP
Ga0318516_1086368113300031543SoilLFGAVLIVLTDAPLALLNVVAGVVYALAMPFVALTATYVYFDLRTRAELEPREAPAELPAEIELSRA
Ga0307408_10191239923300031548RhizosphereVIPLAVGTLLGALLIVATEAPLGLANVVAGVINALAMPFVALTTSYLYFDARARLELEAEGEPGELPPEISLSAP
Ga0318500_1027617323300031724SoilLLIIVTDAPLPLLNVVAGLVYALAMPFVALVTAYVYFDARTRVELPGEREPAILPAEIELSS
Ga0318552_1019667533300031782SoilALLIIVTDAPLPLLNVVAGLVYALAMPFVALVTAYVYFDARTRVELPGEREPAILPAEIELSS
Ga0310907_1041246313300031847SoilLGAILIFLTDLPLAMLNIVAGVVYALSMPFVALVTAYVYFDARARFELEPVEHVDELPSEIALDSA
Ga0310904_1138196913300031854SoilIGALLILVTEAPLALMNVLAGIVYALAMPFVALVTTFLYFDARVRQELPDESDPEELPAEIAI
Ga0302322_10291839923300031902FenSLVGVSAFLAIAAGPLLGVALIFTTSVPLAFLNVVAGMVYALALPFVALVTAYVYFDARVRGELEPSDQPSELPAEIELGPTVSGQS
Ga0307470_1153182023300032174Hardwood Forest SoilLTDVPLPFLNVVAGVIYSLVVPFVALTTSYVYFDARTRVELEPTEDVDELPAEIQLSS
Ga0315273_1295959213300032516SedimentALIFLTSMPLALLNIVAGVVYALALPYVALVTSYVYFDARARGELEPVDRPSQLPAEIELRPS
Ga0316616_10426860523300033521SoilLTEAPFVLVNIVAGVVYALLLPYVALVTAYVYFDARARGELEPVERPSELPAEIDLGAA
Ga0247830_1149391823300033551SoilLGALLIVVTDAPLPLLNVVAGVVYAIAMPFVALVTSYVYFDARTRLELEPVDDPDELPAEIQLSV
Ga0364931_0153973_2_2053300034176SedimentPLLGAILIFATDAPLALLNVFAGVVYALAMPFVALTTAYVYFDARVRDELQPEPEPVELPAEIQLST

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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