Metagenome / Metatranscriptome Family F069219

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F069219
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	103 residues
Representative Sequence	MSKETRRDIVLIVIFSLASAIGMTSVFFGYRFLAWIAIVISDLYLFSVLLLAALRSEDDGFLPRHSWITCFFPRKTTGILVVTLLFLAIVSGFAGLYVGAEVFP
Number of Associated Samples	89
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	23.08 %
% of genes near scaffold ends (potentially truncated)	90.32 %
% of genes from short scaffolds (< 2000 bps)	91.94 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.548 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (25.000 % of family members)
Environment Ontology (ENVO)	Unclassified (25.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (40.323 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 65.91% β-sheet: 0.00% Coil/Unstructured: 34.09%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF07311	Dodecin	12.10
PF01488	Shikimate_DH	3.23
PF02515	CoA_transf_3	2.42
PF00248	Aldo_ket_red	1.61
PF13442	Cytochrome_CBB3	1.61
PF06826	Asp-Al_Ex	1.61
PF00072	Response_reg	0.81
PF00881	Nitroreductase	0.81
PF00149	Metallophos	0.81
PF00821	PEPCK_GTP	0.81
PF00115	COX1	0.81
PF05201	GlutR_N	0.81
PF04519	Bactofilin	0.81
PF01243	Putative_PNPOx	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	12.10
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	2.42
COG2985	Uncharacterized membrane protein YbjL, putative transporter	General function prediction only [R]	1.61
COG0373	Glutamyl-tRNA reductase	Coenzyme transport and metabolism [H]	0.81
COG1274	Phosphoenolpyruvate carboxykinase, GTP-dependent	Energy production and conversion [C]	0.81
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	0.81

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.55 %
Unclassified	root	N/A	6.45 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.55 %
Unclassified	root	N/A	6.45 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.55 %
Unclassified	root	N/A	6.45 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	86.29 %
Unclassified	root	N/A	6.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	86.29 %
Unclassified	root	N/A	6.45 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	84.68 %
Unclassified	root	N/A	6.45 %
Spartobacteria	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria	0.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	84.68 %
Unclassified	root	N/A	6.45 %
Chthoniobacterales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales	0.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	84.68 %
Unclassified	root	N/A	6.45 %
Chthoniobacteraceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae	0.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	84.68 %
Unclassified	root	N/A	6.45 %
Candidatus Udaeobacter	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	0.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459009\|GA8DASG02JY8QO	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	541	Open in IMG/M
2170459010\|GIO7OMY01CGC6Q	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	521	Open in IMG/M
3300000955\|JGI1027J12803_100158367	All Organisms → cellular organisms → Bacteria	2896	Open in IMG/M
3300000955\|JGI1027J12803_109070338	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	820	Open in IMG/M
3300002899\|JGIcombinedJ43975_10061775	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	644	Open in IMG/M
3300004114\|Ga0062593_101349915	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	759	Open in IMG/M
3300005176\|Ga0066679_10676301	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	671	Open in IMG/M
3300005294\|Ga0065705_10546635	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	741	Open in IMG/M
3300005437\|Ga0070710_11315281	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	538	Open in IMG/M
3300005439\|Ga0070711_102040575	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	505	Open in IMG/M
3300005447\|Ga0066689_10363484	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	903	Open in IMG/M
3300005468\|Ga0070707_101348768	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	680	Open in IMG/M
3300005471\|Ga0070698_100608691	All Organisms → cellular organisms → Bacteria	1033	Open in IMG/M
3300005540\|Ga0066697_10519630	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	672	Open in IMG/M
3300005552\|Ga0066701_10580743	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	685	Open in IMG/M
3300005764\|Ga0066903_103234166	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	881	Open in IMG/M
3300005764\|Ga0066903_103434911	All Organisms → cellular organisms → Bacteria	854	Open in IMG/M
3300005764\|Ga0066903_103681016	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	825	Open in IMG/M
3300005764\|Ga0066903_107711062	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	554	Open in IMG/M
3300005764\|Ga0066903_108482935	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	524	Open in IMG/M
3300005937\|Ga0081455_10086620	All Organisms → cellular organisms → Bacteria	2551	Open in IMG/M
3300006173\|Ga0070716_101496745	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	551	Open in IMG/M
3300006175\|Ga0070712_101561763	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	577	Open in IMG/M
3300006796\|Ga0066665_10797864	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	745	Open in IMG/M
3300006796\|Ga0066665_11455666	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	532	Open in IMG/M
3300006796\|Ga0066665_11519496	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	523	Open in IMG/M
3300007255\|Ga0099791_10317907	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	743	Open in IMG/M
3300009090\|Ga0099827_11829748	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	529	Open in IMG/M
3300010159\|Ga0099796_10559430	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	514	Open in IMG/M
3300010359\|Ga0126376_12250277	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	590	Open in IMG/M
3300010366\|Ga0126379_10820662	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1030	Open in IMG/M
3300010376\|Ga0126381_101367917	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1023	Open in IMG/M
3300010376\|Ga0126381_102967677	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	674	Open in IMG/M
3300010398\|Ga0126383_11033646	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	910	Open in IMG/M
3300012198\|Ga0137364_10948704	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	651	Open in IMG/M
3300012198\|Ga0137364_11185861	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	572	Open in IMG/M
3300012199\|Ga0137383_11105691	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	573	Open in IMG/M
3300012200\|Ga0137382_11049692	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	584	Open in IMG/M
3300012201\|Ga0137365_11244345	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	530	Open in IMG/M
3300012202\|Ga0137363_10589765	All Organisms → cellular organisms → Bacteria → Proteobacteria	938	Open in IMG/M
3300012202\|Ga0137363_10618950	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	914	Open in IMG/M
3300012205\|Ga0137362_11245369	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	629	Open in IMG/M
3300012207\|Ga0137381_10960565	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	738	Open in IMG/M
3300012208\|Ga0137376_10815362	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	803	Open in IMG/M
3300012210\|Ga0137378_10614806	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	997	Open in IMG/M
3300012210\|Ga0137378_11640004	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	551	Open in IMG/M
3300012211\|Ga0137377_11869717	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	518	Open in IMG/M
3300012349\|Ga0137387_10516497	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	867	Open in IMG/M
3300012354\|Ga0137366_10155284	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1721	Open in IMG/M
3300012354\|Ga0137366_10575377	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	809	Open in IMG/M
3300012354\|Ga0137366_10584301	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	802	Open in IMG/M
3300012356\|Ga0137371_10580999	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter	861	Open in IMG/M
3300012356\|Ga0137371_10912897	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	668	Open in IMG/M
3300012359\|Ga0137385_10942967	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	713	Open in IMG/M
3300012361\|Ga0137360_11232159	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	647	Open in IMG/M
3300012361\|Ga0137360_11484960	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	582	Open in IMG/M
3300012917\|Ga0137395_10291145	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	1155	Open in IMG/M
3300012929\|Ga0137404_11194790	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	699	Open in IMG/M
3300012948\|Ga0126375_11753790	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	540	Open in IMG/M
3300012971\|Ga0126369_10933204	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	954	Open in IMG/M
3300012971\|Ga0126369_11273185	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	825	Open in IMG/M
3300012971\|Ga0126369_11722309	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	716	Open in IMG/M
3300012971\|Ga0126369_12047603	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	660	Open in IMG/M
3300015053\|Ga0137405_1136627	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	969	Open in IMG/M
3300015264\|Ga0137403_10755547	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	830	Open in IMG/M
3300016319\|Ga0182033_10466491	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1079	Open in IMG/M
3300016357\|Ga0182032_10354756	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1174	Open in IMG/M
3300016357\|Ga0182032_11611944	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	565	Open in IMG/M
3300016387\|Ga0182040_11418397	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	588	Open in IMG/M
3300016387\|Ga0182040_11803596	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	524	Open in IMG/M
3300016422\|Ga0182039_11312921	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	656	Open in IMG/M
3300016445\|Ga0182038_10871486	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	792	Open in IMG/M
3300018081\|Ga0184625_10055788	All Organisms → cellular organisms → Bacteria	1985	Open in IMG/M
3300018433\|Ga0066667_11494604	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	597	Open in IMG/M
3300020004\|Ga0193755_1146093	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	721	Open in IMG/M
3300024317\|Ga0247660_1005153	Not Available	1930	Open in IMG/M
3300025910\|Ga0207684_10938194	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	726	Open in IMG/M
3300026537\|Ga0209157_1385209	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	505	Open in IMG/M
3300026861\|Ga0207503_1004989	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	737	Open in IMG/M
3300027617\|Ga0210002_1062089	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	653	Open in IMG/M
3300027655\|Ga0209388_1128953	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	720	Open in IMG/M
3300027874\|Ga0209465_10549856	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	574	Open in IMG/M
3300030973\|Ga0075395_11431736	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	684	Open in IMG/M
3300031057\|Ga0170834_101738346	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	765	Open in IMG/M
3300031057\|Ga0170834_112383197	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	700	Open in IMG/M
3300031122\|Ga0170822_15473256	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	517	Open in IMG/M
3300031128\|Ga0170823_10010029	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	867	Open in IMG/M
3300031128\|Ga0170823_15814074	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	524	Open in IMG/M
3300031128\|Ga0170823_16788189	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	733	Open in IMG/M
3300031231\|Ga0170824_100959299	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	605	Open in IMG/M
3300031231\|Ga0170824_101712350	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	712	Open in IMG/M
3300031231\|Ga0170824_110827811	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	518	Open in IMG/M
3300031231\|Ga0170824_110830558	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	836	Open in IMG/M
3300031231\|Ga0170824_120460509	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	978	Open in IMG/M
3300031231\|Ga0170824_121211235	All Organisms → cellular organisms → Bacteria	909	Open in IMG/M
3300031231\|Ga0170824_128893244	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	729	Open in IMG/M
3300031446\|Ga0170820_12276639	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1892	Open in IMG/M
3300031446\|Ga0170820_14381776	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	693	Open in IMG/M
3300031474\|Ga0170818_102815384	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	589	Open in IMG/M
3300031474\|Ga0170818_107562822	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	878	Open in IMG/M
3300031543\|Ga0318516_10488632	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	707	Open in IMG/M
3300031682\|Ga0318560_10506725	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	654	Open in IMG/M
3300031754\|Ga0307475_11106590	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	620	Open in IMG/M
3300031771\|Ga0318546_11297944	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	511	Open in IMG/M
3300031879\|Ga0306919_10004275	All Organisms → cellular organisms → Bacteria	7403	Open in IMG/M
3300031912\|Ga0306921_11452234	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	752	Open in IMG/M
3300031941\|Ga0310912_11499881	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	508	Open in IMG/M
3300031946\|Ga0310910_11485377	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	520	Open in IMG/M
3300031962\|Ga0307479_10866178	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300031981\|Ga0318531_10584091	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	506	Open in IMG/M
3300032001\|Ga0306922_10854765	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	948	Open in IMG/M
3300032001\|Ga0306922_10994606	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	866	Open in IMG/M
3300032025\|Ga0318507_10442993	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	565	Open in IMG/M
3300032035\|Ga0310911_10522729	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	688	Open in IMG/M
3300032180\|Ga0307471_101839221	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	756	Open in IMG/M
3300032205\|Ga0307472_101979544	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	583	Open in IMG/M
3300032261\|Ga0306920_100476559	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1853	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.39%
Host-Associated	Host-Associated	1.61%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.58%
Plants	Host-Associated → Plants	1.61%
Aquatic	Environmental → Aquatic	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.58%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.61%
Sediment	Environmental → Aquatic → Sediment	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	85.48%
Loam	Environmental → Terrestrial → Soil → Loam	12.10%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.29%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	34.68%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	12.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.65%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	25.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	13.71%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.06%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.65%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.65%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.61%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	1.61%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.81%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.81%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.81%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459009	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cm	Environmental	Open in IMG/M
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental	Open in IMG/M
3300024317	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK01	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026537	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 (SPAdes)	Environmental	Open in IMG/M
3300026861	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G06A5a-12 (SPAdes)	Environmental	Open in IMG/M
3300027617	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027655	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300030973	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB6 Emin (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F47_05319610	2170459009	Grass Soil	MSKETRKDIVLIVIFASVSAIGMTSVFLAYRFLAWIAIVISDVYLFSVLLLAALRSEDDGFLRRHSWITRFFPRKTTGIVVVTL
F62_01697780	2170459010	Grass Soil	MSKETRRDVVLIVFFALVSAVGLTSVFCGCRFLAWISIATSDLYLSIVLLLAALRSDDDDFLDRHPWITGFFPRKATGILVVTL
JGI1027J12803_1001583671	3300000955	Soil	MRKEARRDIVLIVSFALVLAAGLTSVFLGNRFLAWIVIAISDSYLSIVLLLAALRSDDENFLDRHLWTTVFFPRRTTGIFVVAL
JGI1027J12803_1090703381	3300000955	Soil	MSKETRTDLVLIFIIFLVSAAGVTSVFVGSRVLAWIAIAISDSYLAGVLLLAALRSDDANFLHKHSWIEGFFPRRTPGLFVAGFIFVAVISGFAGLYVGTETFSSSKSPLDALYISAFTLAF
JGIcombinedJ43975_100617751	3300002899	Soil	MSEETRKDIVLIVIFSLVSATGMASVFLGCRFLARIVIVVSDLYLFSVLLLAALRSDDDGFLRRHAWITRFFPRKTTGIFVALLFLAIVSGFAGLYVGAEVF
Ga0062593_1013499151	3300004114	Soil	MNEETRRDIVLIVIFSLVSAIGMISVFLGYRFLAWIAIVISDVYLFSVLLLAALRSDDDGFLDKHSWITRFFPRKTTGILVVTLLFLSVLSGFAGLYVG
Ga0066672_106343502	3300005167	Soil	MSKETRRDLVLTFITFLVSAGGVTSVFVGSRVLAWTAIAISDSYLAAVLLLAALRSDDDDFLDRHSWITGFFPRK
Ga0066679_106763011	3300005176	Soil	MSKETTRDVVLIVVFSLVSVSGIASVFLGCRFLAWIVIVISDLYLFSVLLLAALRPDDDDFLRRHSWITRFFPRKTTGISIA
Ga0065705_105466351	3300005294	Switchgrass Rhizosphere	MRKETRRDIVLIVIFFLVSATGMASVFLDCRFLARIVIVISDLYLFSVLLLAALRSDDDGFLRRHSWITRFFPRKTTGIFVVALLFLAIVSGFAGLYVGAEVFPSGKTPLDALYISFFIMGFTDYSP
Ga0070714_1008558581	3300005435	Agricultural Soil	MSEETRRDIALIGTFFLVSATGMASVFLGPRLLAWIVIVISDLYLLIVLLLAALRSDDESFLDRHPWLVNFFPRRTAALLLVVLL
Ga0070710_113152811	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MSKEARRDLVLTFITFLVSAAGITSVFVGSRVLAWTAIAISDSYLAALLLLAALRSDDDDFLDRHSWITGFFPRKTTGILVVTLLFLAIVSGFAGLYVGAEVFPSGKTPLDALYISFFIMGFTDYSP
Ga0070711_1020405751	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	IHMSEETRRDIVLIVIFSLVSAIGMASVFLGSRFLAWIVIAISDLYLSIVLLLAALRSDDDGFLDKHSWVTRFFPRKTAGILVVTLLFFERCFWLC*
Ga0066689_102393331	3300005447	Soil	MSKETRTDLALIFIIFLVSAAGVTSVFCGCRFLAWIAIVISDFYLFAVLLLAALRADDDGFLDRHPWITGFFPRKA
Ga0066689_103634842	3300005447	Soil	MSKETRRDIVLIVIFALVSAIGVTSVFLGCRFLAWIVIAISDLYLSIVLLLAALRSDDDGFLDRHSWITRFFPRKTAGILVIILLFLSVVSGFAGLYVGVEVFPSGKTPLDALYISFFTLGFTDYS
Ga0070707_1013487682	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MSKETRTDLALIFIIFLVSAAGVTSIFCGCRFLAWIAIVISDFYLFAVLLLAALRADDDGFLDRHPWITGFFPRKAAGILVVILLFLAIVSGFAGLYVGVEVFPSGKTPLDALYISFFILGFTDYS
Ga0070698_1006086913	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MSNETRRDVVLVIAIFFVSAAGVTSVFAGCRSLAWVVIAISDLYLSVVLLLAALRSDDDGFLDKHSWATEFFPRRTAGLLVVTLLFVAIVSA
Ga0066697_105196301	3300005540	Soil	VSKETRRDIVLIVIFALVSAIGVASVFLGCRFLAWIVIAISDLYLSIVLLLAAFLSDDERFLDKHSWMTGFFPRRRTAGLLVVTLLFLAVVSGFAGLYVGTEVFSSVKTPLDALYISSFTLALTDYSPK
Ga0066701_105807432	3300005552	Soil	MSKETRRDIVLIVIFALVSATGMVSVFLGCRFLAWIVIGISDAYLSIVLLLAALRAEDDALLDRQPWITHFFPRKTAGILVVTLLFLSVVSGFAGLYVGTEVFPSGKTPLDALY
Ga0066903_1000531021	3300005764	Tropical Forest Soil	MSKETKRDLILIVILSSVSAMGMVSVFWGCRLLAWITIVVSDLYLLIVLLLAALRAEDDAFLDRHPWITHFFPRKTAG
Ga0066903_1032341661	3300005764	Tropical Forest Soil	MSEETRRDIGLIVIFSLVSAIGMTSVFWGCRSLAWIAIVISDLYLFAVLLLAALRAEDDALLERQPWVRRFFPRKTTGILVVSLLFLAIVSGFAGLYVGTEVFPSGKTPLDAFYISFFIMGF
Ga0066903_1034349111	3300005764	Tropical Forest Soil	MVSQLTMSRETRRDILLIVTFSLVSAIGMTSVFWGCGFLAWVAIAISDLYLLIVLLLAALRAEDDAFLDRHPWITHFFPRKTAGILVV
Ga0066903_1036810162	3300005764	Tropical Forest Soil	MSEETRRDIFFVVIFSLVSAIGMTSVFWGCRSFAWIVIAISDSYLFIVLLLAALRSEDNGFLGRHSWIAGFFPRRTTGILIVALLLLAVVSGFAGLYVGAQVFPSEKSPLDALYMSFFI
Ga0066903_1077110621	3300005764	Tropical Forest Soil	MRKETRRDLVLIVIFSLVSAIGMTSVFGGCRLLAWIAIVISDLYLFLVLLLAALRAEDDVFLRRHPWITHFFPRKTAGIPIATLLFMSLVSGFAGLYVGVDVFPSSKTPLDAIYISIFILGFTDYSPKPGY
Ga0066903_1084829351	3300005764	Tropical Forest Soil	MKKETRRDLVLVLSVFLVSAAGILSVFLRYRSLAWVVIGISDLYLFTVLVLAALRADDDEFLYRHPWITHFFARKTAGIPIIALLFLAIVSGFGGLYVGMDVFPSEQDALGCALY*
Ga0081455_100866201	3300005937	Tabebuia Heterophylla Rhizosphere	MSKETRRDIVLIVIFSLVSAIGMASVFLDCRLLAWMVIVISDSYLFIVLLLAALRSEDDGFLDRHAWIAGFFPRRTTGILIVALLLLAVVSGFAGLYVGAQVFPSGKSPL
Ga0070716_1014967451	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	VRKETRRNIALIGTFFLVSATGMASVFLGPRLLAWIVIVISDLYLFIVLLLAALRSDDESFLDRHPWLANFFPRRTAALLLVVLLFTAVLLGFAGLYVGTEIFASTKTPLDAIY
Ga0070712_1015617633	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MRKEARRDIVLIVSFALVLAAGLTSVLLGNRFLAWIVIAISDSYLSIVLLLAALRSDDENFLDRHLWTTVFFPRKTTGIFVVALLFLAIVSGFA
Ga0066665_107978643	3300006796	Soil	MSKETRRDLVLTFITFLVSAGGVTSVFVGSRVLAWTAIAISDSYLAAVLLFAALRSDDDDFLDRHSWITGFFPRKTTGILVVTLLFLAIVSGFAGLYVGAEVFPSGKTPLDALYISFFIMGFTDYS
Ga0066665_114556662	3300006796	Soil	MSKETRRDIVLIVIFALVSATGMVSVFLGCRFLAWIVIGISDAYLSIVLLLAALRAEDDALLDRQPWITHFFPRKTAGILVVTLLFLSVVSGFAGLYVGAEVFPSGKTPLDALY
Ga0066665_115194962	3300006796	Soil	MSKETTRDVALVLIMFLLSAAGMASVFLGCRFLARIVIVISDLYLFSVLLLAALRSDDDDFLRRHSWITRFFPRKTTGISIAALLFLA
Ga0099791_103179072	3300007255	Vadose Zone Soil	MSKETRTDLALIFIIFLVSAAGVTSVFCGCRFLAWIAIVISDFYLFAVLLLAALRADDDGFLDRHPWITGFFPRKAAGILVVILLFLAIVSGFAGLYVGAKVFPSGKTSLDALYI
Ga0066710_1037300531	3300009012	Grasslands Soil	MSKETRRDIVLIVIFALVSAIGVASVFLGCRFLAWIVIAISDLYLSIVLLLAALRSDDDGFLDRHSWITRFFPRKTA
Ga0099827_118297481	3300009090	Vadose Zone Soil	MSEETRRDIVLIVIFSLVSAIGMTSVFLGYRFLAWIAIVISDFYLFAVLLLAALRSDDDGFLYRHSWITGFFPRKTTGILVVALLFLAIVSGFAG
Ga0126374_104575692	3300009792	Tropical Forest Soil	SAIGMTSVFWGCRSFAWIVIAISDSYLFIVLLLAALRSEDNGFLGRHSWIAGFFPRRTTGILIVALLLLAVVSGFAGLYVGAQVFPSEKSPLDALYMSFFILAFWATRLTMATVSW*
Ga0099796_105594301	3300010159	Vadose Zone Soil	MSEETRRDIVLIVIFASVLAIGMTSVFLGYRFLAWIAIVISDVYLFSVLLLAALRSEDDGFLRRHSWITRFFPRKTTGIVVVTL
Ga0126376_122502771	3300010359	Tropical Forest Soil	MSKETRRDVVLIVTFFLVSAVGMTSVFLGCRLLAWIVIVISDLYLFAVLLLAALRAEDDAFLDRHPWITYFFPRKTAGIPVATLLFLSL
Ga0126379_108206621	3300010366	Tropical Forest Soil	MSEETRRNIVLIVIFSLVSAIGMTSVFWGCRFLAWIAIVISDLYLSTVLLLAARRSEDDGFLDRHPWIAGFFPRRTTGILIVALLLLAVVSGFAGLYVGTQVFPSAESPLDALYM
Ga0126381_1013679173	3300010376	Tropical Forest Soil	MVSQRTMSRETRRDIVLIVTFSLISAIGMTSVFWGCRFLAWIAIAISDLYLLIVLLLAALRAEDDAFLDRHPWITHFFPRKTAGILVVTL
Ga0126381_1029676772	3300010376	Tropical Forest Soil	MSKETRRDLVLIVILSLVSAVGMTSVFWGCRLLGWIAIAISDLYLLIVLLLAALRAEDDAFLDRHPWITHLFPRKTAGIAVVTLLFLSLLSGFAGLYVGDQVFPSSKTPLDAFYISFFVLGFTDYSP
Ga0126383_110336463	3300010398	Tropical Forest Soil	MSRETRRDIVLIVTFSLISAIGVTSVFWGCQFLAWIAIAISDLYLLIVLLLAALRAEDDAFLDRHPWITHFFPRKTAGILVVTLLLLTILSGFAGLYVGA
Ga0137364_109487041	3300012198	Vadose Zone Soil	MSKETRRDIVLIVIFSLVSATGIASVVLGCRFLAPIVIVISDSYLFSVLLLAAFRSDDDGFLERHSWITRFFPRKTTGIVVVTLLFLAILSGFAGLYVGTRVFPSGK
Ga0137364_111858612	3300012198	Vadose Zone Soil	VSKETRRDIVLIVIFALVSAIGVASVFLGCRFLAWIVIAISDLYLSIVLLLAAFLSDDERFLDKHSWMTGFFPRRRTAGLLVVTLLFLAVVSGFAGLYVGTEVFSSVKTPLDALYISS
Ga0137383_111056911	3300012199	Vadose Zone Soil	MSEETRRDIVLIVIFAFVSAIGMASVFLGCRFLAWIVIVISDLYLSIVLLLAALRSEDEGFLDRHSWVADFFPRRTTGLLVVTLLFVAVVSGFAGLYVGTEVFQSSKTP
Ga0137382_110496921	3300012200	Vadose Zone Soil	MSEETRRDIVLIVIFALVSAIGMASVFLGYRFLAWIAIVISDVYLFSVLLLAALRSEDDGFLRRHSWITRFFPRKTTGIVVVTLLFLAIVSGFAGLYVGAEVFPSGKTPLDALYISFFIMGFTDY
Ga0137365_112443452	3300012201	Vadose Zone Soil	VSKETRRDIVLIVIFALVSAIGVASVFLGCRFLAWIVIAISDLYLSIVLLLAAFLSDDERFLDKHSWMTGFFPRRRTAGLLVVTLLFLAVVSGFAGLYVGTEVF
Ga0137363_105897653	3300012202	Vadose Zone Soil	MSKETRRDLVLTFILFLVSAAGVTSVFVGSRVLAWIAIVISDSYLAAVLLLAALRSDDDDFLDRHSWITGFFPRKTTGILVVTLLFLAIVSGFAGLYVGAEVFPSGKTPLDALYISFFI
Ga0137363_106189502	3300012202	Vadose Zone Soil	MSKETTRDVVLIVVFSLVSVSGIASVFLGCRFLARIVIVISDLYLFSVLLLAALRSDDDDFLRRHSWITRFFPRKTTGISIAALVFLAIVSGFAGLYVGAEVFPSGKTPLDALYISFFIMGFTDYS
Ga0137362_112453691	3300012205	Vadose Zone Soil	MSKETKRDIVLIVIFALVSAIGVASVFLGCRFLAWIVIAISDSYLSVVLLLAALRSDDDGFLDRHSWITRFFPRRRTAGLLVVALLFLAVVSGFAGLYVGTEVFSSVKTPLDALYISSFTLALTDYSP
Ga0137381_109605651	3300012207	Vadose Zone Soil	MSKETTRDVALVLIMFLLSAAGMASVFLGCRFLARIVIVISDLYLFSVLLLAALRSDDDDFLRRHSWITRFFPRKTTGISIAALLFLAIVSGFAG
Ga0137381_112252921	3300012207	Vadose Zone Soil	VSKETRRDTLLALIFLLVSATGVASVLSGRRPLAWIVIAISDSYLLLVLLFAALRSDDESFLDRHPWVANFFPRRTAALLLVVLLFTAVLL
Ga0137376_108153623	3300012208	Vadose Zone Soil	MSKETRRDLVLTFILFLVSAAGVTSVFVGSRVLAWIAIVISDSYLAAVLLLAALRSDDDDFLDRHSWITGFFPRKTTGILVVTLLFLAIVSGFAGLYVGAEVFPSGKTPLDALYISFFIMGFTDYS
Ga0137378_106148063	3300012210	Vadose Zone Soil	VSKETRRDIVLIVIFSLLSAIGITSVFSRCRFLAWIAIVSSDLYLSIVLLLAALRAEDDAFLDRHPWITHFFPRKTAGILVVTLLFLSVVSGFAGLYVGVEVFPSAK
Ga0137378_116400041	3300012210	Vadose Zone Soil	MSEETRRDIVLIVIFSLVSAIGMASVFLGCRFLAWIAIVISDAYLFSVLLLAALRSDDNGFLRRHLWITRFFPRKTTGISIAALLFLAIVSGFAGLYVG
Ga0137377_118697172	3300012211	Vadose Zone Soil	VSKETRRDIVLIVIFALVSAIGVASVFLGCRFLAWIVIAISDLYLSIVLLLAAFLSDDERFLDKHSWMTGFFPRRRTAGLLVVTLLFLAVVSGFAGLYVG
Ga0137387_105164973	3300012349	Vadose Zone Soil	VSKETRRDIVLIVIFALVSAIGVASVFLGCRFLAWIVIAISDLYLSIVLLHAAFLSDDERFLDKHSWMTGFFPRRRTAGLLVVTLLFLAVVSGFAG
Ga0137366_101552844	3300012354	Vadose Zone Soil	MKKETRRDIVLIVIFSLGSATGIVSVFLGCRFLAPIAIVISDLYLSIVLLLAALRSDDDGFLRRHSWITRFFPRKTAGILVVALLFLTIVSGFAGLYVGAEVFP
Ga0137366_105753771	3300012354	Vadose Zone Soil	MSEETRRDIVLIVIFSLVSAIGMASVFLGCRFLAWIAIVMSDVYLFSVLLLAALRSDDDVFLRRHAWITRFFPRKTTGIFIAALLFLAIVSGFAGLYVGAEVFPSGKTPLDAL
Ga0137366_105843011	3300012354	Vadose Zone Soil	VSKETRRDIVLIVIFALVSAIGVASVFLGCRFLAWIVIAISDLYLSIVLLLAAFLSDDERFLDKHSWMTGFFPRRRTAGLLVVTLLFLAVI
Ga0137371_105809991	3300012356	Vadose Zone Soil	MSKETRRDLVLTFITFLVSAAGVTSVFVGSRVLAWIAIVISDSYLAAVLLLAALRSDDANFLHKHSWIEGFFPRRMPGLFVAGFIFMAVISGFAGLY
Ga0137371_109128972	3300012356	Vadose Zone Soil	VSKETRRDIVLIVIFALVSAIGVASVFLGCRFLAWIVIAISDLYLSIVLLLAAFLSDDERFLDKHSWMTGFFPRRRTAGLLVVTLLFLAVVSGFAGLYVGTEVFSSVKTPLDALYISSFT
Ga0137385_109429671	3300012359	Vadose Zone Soil	MSKETRRDLVLTFITFLVSAAGVTSVFVGSRVLAWIAIVISDSYLAAVLLLAALRSDDDDFLDRHSWITGFFPRKTTGILVVT
Ga0137360_112321591	3300012361	Vadose Zone Soil	MSKETRRDLVLTFILFLVSAAGVTSVFVGSRVLAWIAIVISDSYLAALLLLAALRSDDDDFLDRHSWITGFFPRKTTGILVVTLLFLAIVS
Ga0137360_114849601	3300012361	Vadose Zone Soil	MSKETRRDIVLIFIFALVSAMGMTSAFCGCRLLAWIAIVISDFYLFAVLLLAALRSDDDGFLDRHPWITGFFPRKAAGILVVTLLFLAIVSGFAGLYV
Ga0137395_102911452	3300012917	Vadose Zone Soil	MSEETRRDIVLIVIFSLVPAIGMTSVFLGYRFLAWIAIVISDLYLLTVLLLAALRAEDDALLDRQPWITHFFPRKTAGILVVTLLFLSVVSGFAGLYVGAEVFPSGKTPLDALYVSFFILGFTDYS
Ga0137404_111947901	3300012929	Vadose Zone Soil	MSKETTRDVVLIVVFSLVSVSGMASVFLGCRFLARIVIVISDLYLFSVLLLAALRSDDDDFLRRHSWITRFFPRKTTGISIA
Ga0126375_117537901	3300012948	Tropical Forest Soil	VSRETRRDIVLIVTFFLVSAIGMTSVFWGCRFLAWITIVVSDSYLFIVLLLAALRAEDDAFLDRHPWITHFFPRKTAGILVV
Ga0126369_109332041	3300012971	Tropical Forest Soil	MSRETRRDIVLIVTFSLISAIGMTSVFWGCRFLAWIAIAISDLYLLIVLLLAALRAEDDAFLDRHPWITHFFPRKTAGILVVTLL
Ga0126369_112731852	3300012971	Tropical Forest Soil	MSRETRRDIVLIVTLSLVSAIGMTSVFWGCRVLAWIAIAISDLYLLILLLLAALRAEDDAFLDRHPWITHFFPRKTAGILVVTLLALTILSGFAGLYVGAKVFPSVKTPLDALYTSFFIL
Ga0126369_117223092	3300012971	Tropical Forest Soil	MSEETRRDIFLVVIFSLVSAIGMTSVFWGCRSFAWIVIAISDSYLFIVLLLAALRSEDDSFLNRHSWIAGFFPRRTTGILIVALLLLAVVSGFAGLYVGAQVFPSEKSPLDALYMSFFILAFWATRLTMATVSW*
Ga0126369_120476031	3300012971	Tropical Forest Soil	VAFTVAELLFMSRETRRDIVLVVTLCLVSAVGMASVFWGCRFLAWIAIAISDLYLLIVLLFAALRAEDDAFLDRHPWITHFFPRKTAGILVVTLLLLTILSGFAGLYVGAKVFPSVKTPLDALYTSFFILG
Ga0137405_11366272	3300015053	Vadose Zone Soil	MSKETRRDLVLIVIFALVSAIGMTSVFCGCRFLAWIAIVISDFYLFAVLLLAALRSDDDGFLERHPWITGFFPRKAAGILVVTLLFLAIVSGFAG
Ga0137403_107555471	3300015264	Vadose Zone Soil	VSKETRRDIVLIVIFSLLSAIGITSVFSRCRFLAWIAIVSSDLYLSIVLLLAALRAEDDAFLDRHPWITHFFPRKTAGILVVTLLFLTIVSGFAGLYVRVE
Ga0182033_104664911	3300016319	Soil	MSKDARKDIVLIVIFSLVSATGMASVFLGYRLLAWIVIGISDLYLFIVLLLAAHRAEDDGFLDRHPWVTGVFPRKPAGILVVTLLFLAIVSGFAGLYVGTEVFP
Ga0182032_103547561	3300016357	Soil	MSRETRRDIVLIVTFSLVLAIGMTSVFWGCRFLAWIAIAISDLYLLILLLLAALRAEDDAFLDRHPWITHFFPRKTAGILVVTLL
Ga0182032_116119441	3300016357	Soil	MSKDARKDIVLIVIFSLVSATGMASVFLGYRLLAWIVIGISDLYLFIVLLLAAHRAEDDGFLDRHPWVTGVFPRKPAGILVVTLLFLAIVSGFAGLYVGMEVFPSDKTPLDALY
Ga0182040_114183972	3300016387	Soil	MSKETRRDLVLIVILSLVSAMGMTSVFWGCRFLAWIAIVVSDLYLFIVLLLAALRAEDDAFLDRHPWVTHLFPRKTAGIPVAALLF
Ga0182040_118035961	3300016387	Soil	MSKETRRDFVLIVILSLMSAMGMTSVFWGCRFLAWITIVVSDLYLLIVLMLAALRAEDDTFLNRHSWITHFFPRKTAGILVVTLLFLTI
Ga0182039_113129211	3300016422	Soil	MSKDARKDIVLIVIFSLVSATGMASVFLGYRLLAWIVIGISDLYLFIVLLLAAHRAEDDGFLDRHPWVTGVFPRKPAGILVVTLLFLAIV
Ga0182038_108714861	3300016445	Soil	MSRETRRDIVLIVTFSLVLAIGMTSVFWGCRFLAWIAIAISDLYLLMLLLLAALRAEDDAFLDRHPWITHFFPRKTAGILVVTL
Ga0184625_100557881	3300018081	Groundwater Sediment	MSEETRRDIVLIVIFASVSAIGMTSVFLGYRFLAWIAIVISDVYLFSVLLLAALRSEDDGFLRRHSWITRFFPRKTTGIVVVTLLF
Ga0066667_114946041	3300018433	Grasslands Soil	MSKETRRDIVLIVIFALVSAIGMASVFLGCRFLAWIAIVISDGYLFSVLLLAALRSDDDVSLRRHSWITRFFPRKTPGISIAALLFLAIVAGFAALYV
Ga0193755_11460931	3300020004	Soil	MSKETRRDLVLTFILFLVSAAGVTSVFVGSRVLAWIAIVISDSYLAAVLLLAALRSDDDDFLDRHSWITGFFPRKTTGILVVTLLF
Ga0247660_10051535	3300024317	Soil	MSEETRRDIALIGTFFLVSATGMASVFLGPRLLAWIVIVISDLYLFIVLLLAALRSDDESFLDRHPWLANFFPRRTAALLLVVL
Ga0207684_109381941	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSEETRKDIVLIVIFAFVSAIGMASVFLGCRFLAWIVIAISDLYLSIVLLLAALRSDDDGFLDRHSWITRFFPRKTTGILVVTLLFLSVVSGFAG
Ga0209157_13852092	3300026537	Soil	VSKETRRDIVLIVIFALVSAIGVASVFLGCRFLAWIVIAISDLYLSIVLLLAAFLSDDERFLDKHSWMTGFFPRRRTAGLLVVTLLFLAVVSGFAGLYVGT
Ga0207503_10049891	3300026861	Soil	MSEETRRDIVLIVIFSLVSAIGMASVFLGCRFLAWIAIVISDVYLFSVLLLAALRSDDDGFLDKHSWITRFFPRKTTGILVVTLLFLSVVSGFAGRDSERETAEEVTG
Ga0210002_10620892	3300027617	Arabidopsis Thaliana Rhizosphere	MSEETRRDIVLIVIFSLVSAIGMASVFLGYRFLAWIVIAISDLYLSIILLLAALRSDDDGFLDKHSWVTRFFPRKTAGILVVTLLFLSVLSGFAGLYVGVEVFPSAKTPLDA
Ga0209388_11289532	3300027655	Vadose Zone Soil	MSEETRRDIVLIVIFSLVSAIGMASVFVGCRFLAWIAIVISDAYLFSVLLLAALRSDDDGFLRRHLWITRFFPRKTTGISIAALLFLAIVSGFAGLYVGAEVFPSGK
Ga0209465_105498561	3300027874	Tropical Forest Soil	VSKETRRDVVLIVILSLVSAVGMTSVFWGCRLLAWIAIVVSDSYLFTILLLAALRAEDDAFLDRHRWVTQLFPRKTAGIPVATLLLLSLVSGFAGLYVGVEVFPSSKTPLDALYIS
Ga0075395_114317362	3300030973	Soil	MREKTRRDIVLIVIFSLVSAIGMTSVFLGYRFLAWIAIVISDVYLFSVLLLAALRSEDDGFLRRHSWITRFFPRKTTGIVVVTLLFLAIVSGFAGLYVGAEVFPSGK
Ga0170834_1017383462	3300031057	Forest Soil	MSEETRRDIVLIVIFALVSAIGMTSVFLGYRFLAWFAIVISDFYLFAVLLLAALRAEDDGFLDRHPWITRFFPRKTTGILVVTLLFVAIVSGFGGLYVGAEVFPSGKTPLDALYISFFILGFTDYSPAP
Ga0170834_1123831973	3300031057	Forest Soil	MSKETRRDIVLTFITFLVSAAGVTSVFVGSRVLAWTAIAISDSYLAAVLLLAALRSDDDDFLNRHSWITGFFPRKTTGILVVTLLF
Ga0170822_154732561	3300031122	Forest Soil	MSKETRRDIVLIVIFSLASAIGMTSVFFGYRFLAWIAIVISDLYLFSVLLLAALRSEDDGFLPRHSWITCFFPRKTTGILVVTLLFLAIVSGFAGLYVGAEVFP
Ga0170823_100100292	3300031128	Forest Soil	MSKETRRDIVLIVIFSSVSAIGMTSVFLGYRFLAWIAIVISDVYLFSVLLLAALRSEDDGFLHRHSWITRFFPRKTTGIVVVTLLFLAIVSGFAGLYVGAEVFPSGKTPLDALYISFFI
Ga0170823_158140741	3300031128	Forest Soil	MSKETRRDIVLIVIFSLVSAIGMISVFLGYRFLAWIAIVISDFYLFAVLLLAALRAEDDGFLDRHPWITGFFPRKTTGILVVTLLFLAIVSGFAGLYVGAEVFPSGKTPLDALYISF
Ga0170823_167881891	3300031128	Forest Soil	MSEETRRDIVLIVIFALVSAIGMTSVFLGYRFLAWFAIVISDFYLFAVLLLAALRAEDDGFLDRHPWITGFFPRKAAGILVVILLFLAIVSGFAGLYVGVEVFPSGKTPLDALYISFFILGFTD
Ga0170824_1009592992	3300031231	Forest Soil	MGTFFLISATGMASVFLGSRLLAWIVIVISDLYLSIVLLLAALRSDDESFLDRHPWLANFFPRRTAALLLVVLLFTAVLLGFAGLYVGTEIFPST
Ga0170824_1017123501	3300031231	Forest Soil	MSEETRRDIVLIVIFALVSAIGMTSAFCGCRFLAWIVIAISGIYLFSVLLLAALRSDDDGFLDRHPWITGFFPRKAAGILVVTLLFFERS
Ga0170824_1108278112	3300031231	Forest Soil	MREKTRRDIVLIVIFSLASAIGMTSVFFGYRFLAWIAIVISDLYLFSVLLLAALRSEDDGFLPRHSWITCFFPRKTTGILVVTLLFLAIVSGFAGLYVGAEVF
Ga0170824_1108305582	3300031231	Forest Soil	MREKTRRDIVLIVIFSLVSAIGMTSVFLGYRFLAWIAIVISDVYLFSVLLLAALRSEDDGFLRRHSWITCFFPRKTTGILVVTLLFLAIVSGFAGLYVGAEVF
Ga0170824_1204605091	3300031231	Forest Soil	MSEETRRDIVLIVIFASVLAIGMTSVFLGYRFLAWVAIVISDVYLFSVLLLAALRSEDDDFLDKHSWITRFFPRKTTGIL
Ga0170824_1212112351	3300031231	Forest Soil	MSKETRRDIVLTFITFLVSAAGVTSVFVGSRVLAWTAIAISDSYLAAVLLLAALRSDDDDFLNRHSWITGFFPRKTTGILVVTLLFLAIVS
Ga0170824_1288932441	3300031231	Forest Soil	MSEETRRDIVLIVTFALVSAIGMTSVFFGCRFLAWIAIVISDLYLFAVLLLAALRSEDDDFLDRHPWITYFFPRKAAGILVVTLLFVAIVSGFAGLYVGAEVFPSGKTPLDALYISFFILGFTDYSPA
Ga0170820_122766391	3300031446	Forest Soil	MSKETRRDIVLIVIFSSVSAIGMTSVFLGYRFLAWIAIVISDVYLFSVLLLAALRSEDDGFLHRHSWITRFFPRKTTGIVVVTLLFLAIVSGFAGLYVGAEVF
Ga0170820_143817762	3300031446	Forest Soil	MSEETRRDIVLIVTFALVSAIGMTSVFFGCRFLAWIAIVISDLYLFAVLLLAALRSEDDDFLDRHPWITYFFPRKAAGILVVTLLFVAIVSGFAGLYVGAEVFPSGKTP
Ga0170818_1028153841	3300031474	Forest Soil	MSKETRRDIVLIVIFSLISAIGMISVFLGYRFLAWIAIVISDFYLFAVLLLAALRSDDDGFLDRHSWITRFFPRKTTGILVVTLLFLAIVSGFAGLYVGAEVFPSGKTPLDALYISF
Ga0170818_1075628221	3300031474	Forest Soil	MREKTRRDIVLIVIFSLVSAIGMTSVFLGYRFLAWIAIVISDVYLFSVLLLAALRSEDDGFLRRHSWITCFFPRKTTGILVVTLLFLAIVSGFAGLYVGAEVFPSGKTPLDALYISF
Ga0318516_104886322	3300031543	Soil	MRKETRRDIVLMVIFFLVSATGMASVFLRYRLLAWIVITISDLYLFIVLLLAALRAEDDEFLHRHPWITYFFPRKTAGISVIALLFLAIVSGFAGLYV
Ga0318560_105067252	3300031682	Soil	MRKETRRDIVLMVIFFLVSATGMASVFLRYRLLAWIVITISDLYLFIVLLLAALRAEDDEFLHRHPWITYFFPRKTAGISVIALLFLAIVSGFAGLYVGTEVFPSGKTPLDAFYISFFV
Ga0307475_111065901	3300031754	Hardwood Forest Soil	MSTETRTDIVLIVILALVSAIGMTSVFGGCRFLAWIAIVISDFYLFTVLLLAALRADDDGFLDRHPWITGFFPRKPAGILVVTLLFLAIVSG
Ga0318546_112979441	3300031771	Soil	MRKETRRDIVLMVIFFLVSATGMASVFLHYRLLAWIVITISDLYLFIVLLLAALRAEDDEFLHRHPWITYFFPRKTAGISVIALLFLAIVSGFAGLY
Ga0306919_100042751	3300031879	Soil	MRKETRRDIVLMVIFFLVSATGMASVFLHYRLLAWIVITISDLYLFIVLLLAALRAEDDEFLHRHPWITYFFPRKTAGISVIALLF
Ga0306921_114522343	3300031912	Soil	MSKDARKDIVLIVIFSLVSATGMASVFLGYRLLAWIVIGISDLYLFIVLLLAAHRAEDDGFLDRHPWVTGVFPRKPAGILVVTLLFLAIVSGFAGLLLERKSFRPTRRPSMR
Ga0310912_114998811	3300031941	Soil	MVSQLTMNRETRRDIVLIVTFSLVSAIGMTSVFCDCRFLAWIAIAISDLYLLILLLLAALRAEDDAFLDRHPWITHFFPRKTAGILVVTLLSLTILSGFAGLYVGAKVF
Ga0310910_114853772	3300031946	Soil	MSKDARKDIVLIVIFSLVSATGMASVFLGYRLLAWIVIGISDLYLFIVLLLAAHRAEDDGFLDRHPWVTGVFPRKPAGILVVTLLFLAIVSGFAGLYVGTEVFPSDKTPLDALYV
Ga0307479_108661783	3300031962	Hardwood Forest Soil	MSKETRRDLVLIFTIFLVSAAGVTSVFVGTRILAWIAIAISDSYLAAVLLLAALRSDDDGFLDRHSWIANFFPRKTAGILVVVL
Ga0318531_105840911	3300031981	Soil	MRKETRRDIVLMVIFFLVSATGMASVFLHYRLLAWIVITISDLYLFIVLLLAALRAEDDEFLHRHPWITYFFPRKTAGISVIALLFLAIVSGFAGLYVGTEVFPSGKTP
Ga0306922_108547651	3300032001	Soil	MSKDARKDIVLIVIFSLVSATGMASVFLGYRLLAWIVIGISDLYLFIVLLLAAHRAEDDGFLDRHPWVTGVFPRKPAGILVVTLLFLAIVSGFA
Ga0306922_109946061	3300032001	Soil	MSKETRRDLVLIVILSLVSAMGMTSVFWGCRFLAWIAIVVSDLYLFIVLLLAALRAEDDAFLDRHPWVTHLFPRKTAGIPVAALL
Ga0318507_104429931	3300032025	Soil	MRKETRRDIVLMVIFFLVSATGMASVFLHYRLLAWIVITISDLYLFIVLLLAALRAEDDEFLHRHPWITYFFPRKTAGISVIALLFLAIVSGFAGLYVGTEVFPSGKTPLD
Ga0310911_105227291	3300032035	Soil	MSKDARKDIVLIVIFSLVSATGMASVFLGYRLLAWIVIGISDLYLFIVLLLAAHRAEDDGFLDRHPWVTGVFPRKPAGILVVTLLFLAIVSGFAGLLLERK
Ga0307471_1018392211	3300032180	Hardwood Forest Soil	MSEETRRDIVLIVIFASVSAIGMASVFLGCRFLAWIAIVISDVYLSIVLLLAALRSDDDGFLDRHSWITRFFPRKTAGILIVTLLFLSVVSGFAGLYVGVEVFPSAKTPIDALYISFFTL
Ga0307472_1019795441	3300032205	Hardwood Forest Soil	MRKEARRDIVLIVSFALVLAAGLTSVFLGNRFLAWIVIAISDSYLSIVLLLAALRSDDENFLDRHLWTTVFFPRKTTGIFVVALLFLAIVSGFAGLYVGAEVFPSG
Ga0306920_1004765593	3300032261	Soil	MSKDARKDIVLIVIFSLVSATGMASVFLGYRLLAWIVIGISDLYLFIVLLLAAHRAEDDGFLDRHPWVTGVFPRKPAGILVVTLLFLAIVSGFAGLLLERKSFRPTRRPSMRFMSASSSWDSPTTRRNLVMVSLL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069219

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences