Metagenome Family F069209

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F069209
Family Type	Metagenome
Number of Sequences	124
Average Sequence Length	95 residues
Representative Sequence	RGGVELVFGQPQLEVTTVAGFGAVQTPGLYSKGERDCVVNVDVAPAQAVQVGYFYNGSTVPMTHEIACQKARRAAELAMQTILARAG
Number of Associated Samples	103
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	6.45 %
% of genes near scaffold ends (potentially truncated)	94.35 %
% of genes from short scaffolds (< 2000 bps)	92.74 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (55.645 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere (9.677 % of family members)
Environment Ontology (ENVO)	Unclassified (58.065 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (80.645 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.00% β-sheet: 22.61% Coil/Unstructured: 57.39%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF01032	FecCD	33.06
PF12079	DUF3558	8.87
PF14011	ESX-1_EspG	3.23
PF03861	ANTAR	0.81
PF00575	S1	0.81
PF01564	Spermine_synth	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG3707	Two-component response regulator, AmiR/NasT family, consists of REC and RNA-binding antiterminator (ANTAR) domains	Transcription [K]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.65 %
Unclassified	root	N/A	44.35 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.65 %
Unclassified	root	N/A	44.35 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.65 %
Unclassified	root	N/A	44.35 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	53.23 %
Unclassified	root	N/A	44.35 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	52.42 %
Unclassified	root	N/A	44.35 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	49.19 %
Unclassified	root	N/A	44.35 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.35 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	18.55 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.81 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.35 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	18.55 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.81 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.35 %
Pseudonocardia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	9.68 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.81 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.35 %
unclassified Pseudonocardia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia	4.84 %
Pseudonocardia thermophila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia thermophila	1.61 %
Pseudonocardia dioxanivorans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia dioxanivorans	0.81 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.81 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.35 %
Pseudonocardia sp. TRM90224	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. TRM90224	4.84 %
Pseudonocardia thermophila	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia thermophila	1.61 %
Pseudonocardia dioxanivorans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia dioxanivorans	0.81 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.81 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	0.81 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004081\|Ga0063454_100163797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1201	Open in IMG/M
3300004479\|Ga0062595_101607813	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	606	Open in IMG/M
3300005329\|Ga0070683_102035571	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	552	Open in IMG/M
3300005331\|Ga0070670_100787857	Not Available	858	Open in IMG/M
3300005337\|Ga0070682_100280862	Not Available	1214	Open in IMG/M
3300005340\|Ga0070689_100488594	Not Available	1053	Open in IMG/M
3300005340\|Ga0070689_101909099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	542	Open in IMG/M
3300005354\|Ga0070675_101709365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	581	Open in IMG/M
3300005355\|Ga0070671_102009142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	515	Open in IMG/M
3300005356\|Ga0070674_100754193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	837	Open in IMG/M
3300005367\|Ga0070667_100878463	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	834	Open in IMG/M
3300005406\|Ga0070703_10404132	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	595	Open in IMG/M
3300005436\|Ga0070713_102337979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. TRM90224	517	Open in IMG/M
3300005441\|Ga0070700_100116431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1784	Open in IMG/M
3300005455\|Ga0070663_100176957	Not Available	1652	Open in IMG/M
3300005456\|Ga0070678_100492283	Not Available	1081	Open in IMG/M
3300005457\|Ga0070662_100682453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	868	Open in IMG/M
3300005457\|Ga0070662_101349456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	614	Open in IMG/M
3300005466\|Ga0070685_10042775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia dioxanivorans	2586	Open in IMG/M
3300005466\|Ga0070685_10325857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1043	Open in IMG/M
3300005535\|Ga0070684_101604911	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	614	Open in IMG/M
3300005539\|Ga0068853_101362137	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	686	Open in IMG/M
3300005548\|Ga0070665_100113500	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	2712	Open in IMG/M
3300005563\|Ga0068855_102313474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	538	Open in IMG/M
3300005564\|Ga0070664_100818250	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	871	Open in IMG/M
3300005577\|Ga0068857_100086022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2810	Open in IMG/M
3300005614\|Ga0068856_100259354	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1753	Open in IMG/M
3300005614\|Ga0068856_100532738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1196	Open in IMG/M
3300005615\|Ga0070702_100418925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	963	Open in IMG/M
3300005616\|Ga0068852_101527839	Not Available	690	Open in IMG/M
3300005719\|Ga0068861_101737108	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	618	Open in IMG/M
3300005841\|Ga0068863_101867054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	611	Open in IMG/M
3300005841\|Ga0068863_102437469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	533	Open in IMG/M
3300005842\|Ga0068858_100530715	Not Available	1138	Open in IMG/M
3300005842\|Ga0068858_100938468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	847	Open in IMG/M
3300005842\|Ga0068858_100985317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	826	Open in IMG/M
3300005843\|Ga0068860_101631759	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	667	Open in IMG/M
3300005844\|Ga0068862_100552898	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1099	Open in IMG/M
3300006028\|Ga0070717_10569325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1027	Open in IMG/M
3300006173\|Ga0070716_101829092	Not Available	503	Open in IMG/M
3300006175\|Ga0070712_100765291	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. TRM90224	827	Open in IMG/M
3300006237\|Ga0097621_101112271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	742	Open in IMG/M
3300006358\|Ga0068871_101763048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	588	Open in IMG/M
3300006804\|Ga0079221_11045055	Not Available	618	Open in IMG/M
3300006881\|Ga0068865_100476007	Not Available	1037	Open in IMG/M
3300009011\|Ga0105251_10417127	Not Available	619	Open in IMG/M
3300009093\|Ga0105240_10840213	Not Available	992	Open in IMG/M
3300009094\|Ga0111539_11341559	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	830	Open in IMG/M
3300009094\|Ga0111539_11501857	Not Available	781	Open in IMG/M
3300009101\|Ga0105247_10353760	Not Available	1034	Open in IMG/M
3300009156\|Ga0111538_11146732	Not Available	983	Open in IMG/M
3300009174\|Ga0105241_11760372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	604	Open in IMG/M
3300009177\|Ga0105248_11367725	Not Available	801	Open in IMG/M
3300009545\|Ga0105237_12142306	Not Available	568	Open in IMG/M
3300009545\|Ga0105237_12760947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	502	Open in IMG/M
3300009553\|Ga0105249_10536216	Not Available	1219	Open in IMG/M
3300010371\|Ga0134125_10244623	Not Available	1994	Open in IMG/M
3300010373\|Ga0134128_10835397	Not Available	1020	Open in IMG/M
3300010396\|Ga0134126_10863602	Not Available	1019	Open in IMG/M
3300010396\|Ga0134126_11213365	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	838	Open in IMG/M
3300010399\|Ga0134127_12627037	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	583	Open in IMG/M
3300010400\|Ga0134122_11761422	Not Available	650	Open in IMG/M
3300010403\|Ga0134123_10571260	Not Available	1080	Open in IMG/M
3300011119\|Ga0105246_10416162	Not Available	1120	Open in IMG/M
3300011119\|Ga0105246_11189325	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. TRM90224	701	Open in IMG/M
3300012212\|Ga0150985_119144955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. TRM90224	1026	Open in IMG/M
3300012469\|Ga0150984_106472042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. TRM90224	982	Open in IMG/M
3300012957\|Ga0164303_11166285	Not Available	561	Open in IMG/M
3300012958\|Ga0164299_10626038	Not Available	740	Open in IMG/M
3300012985\|Ga0164308_11968906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	545	Open in IMG/M
3300012989\|Ga0164305_10147403	Not Available	1592	Open in IMG/M
3300012989\|Ga0164305_10302324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1183	Open in IMG/M
3300013102\|Ga0157371_10860341	Not Available	686	Open in IMG/M
3300013104\|Ga0157370_11276963	All Organisms → cellular organisms → Bacteria	662	Open in IMG/M
3300013105\|Ga0157369_10633203	Not Available	1103	Open in IMG/M
3300013105\|Ga0157369_11729502	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	635	Open in IMG/M
3300013296\|Ga0157374_11949826	Not Available	613	Open in IMG/M
3300013297\|Ga0157378_11062766	Not Available	846	Open in IMG/M
3300013297\|Ga0157378_11707071	Not Available	677	Open in IMG/M
3300013306\|Ga0163162_11832147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	694	Open in IMG/M
3300013307\|Ga0157372_11260855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	853	Open in IMG/M
3300014325\|Ga0163163_10154797	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. TRM90224	2336	Open in IMG/M
3300014325\|Ga0163163_10521627	Not Available	1250	Open in IMG/M
3300014745\|Ga0157377_11595044	Not Available	522	Open in IMG/M
3300014969\|Ga0157376_12898172	Not Available	519	Open in IMG/M
3300019356\|Ga0173481_10710608	Not Available	544	Open in IMG/M
3300025898\|Ga0207692_10860539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	595	Open in IMG/M
3300025901\|Ga0207688_10004521	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia thermophila	7571	Open in IMG/M
3300025906\|Ga0207699_10607257	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	797	Open in IMG/M
3300025907\|Ga0207645_10331097	Not Available	1017	Open in IMG/M
3300025911\|Ga0207654_10522938	Not Available	840	Open in IMG/M
3300025911\|Ga0207654_11215496	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	549	Open in IMG/M
3300025914\|Ga0207671_11480029	Not Available	525	Open in IMG/M
3300025917\|Ga0207660_11702297	Not Available	507	Open in IMG/M
3300025920\|Ga0207649_10249821	Not Available	1277	Open in IMG/M
3300025925\|Ga0207650_10744751	Not Available	829	Open in IMG/M
3300025926\|Ga0207659_11160449	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	664	Open in IMG/M
3300025927\|Ga0207687_10332316	Not Available	1233	Open in IMG/M
3300025927\|Ga0207687_10484441	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1030	Open in IMG/M
3300025933\|Ga0207706_10039273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → Pseudonocardia thermophila	4195	Open in IMG/M
3300025934\|Ga0207686_11172810	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	628	Open in IMG/M
3300025936\|Ga0207670_10856547	Not Available	759	Open in IMG/M
3300025936\|Ga0207670_11335909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	608	Open in IMG/M
3300025940\|Ga0207691_11244073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	616	Open in IMG/M
3300025944\|Ga0207661_12021770	Not Available	522	Open in IMG/M
3300025986\|Ga0207658_11765645	Not Available	565	Open in IMG/M
3300026035\|Ga0207703_10370116	Not Available	1323	Open in IMG/M
3300026075\|Ga0207708_10002660	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	13127	Open in IMG/M
3300026075\|Ga0207708_10065051	All Organisms → cellular organisms → Bacteria	2787	Open in IMG/M
3300026088\|Ga0207641_11918752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	594	Open in IMG/M
3300026089\|Ga0207648_10418043	Not Available	1217	Open in IMG/M
3300026142\|Ga0207698_12106596	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	578	Open in IMG/M
3300027787\|Ga0209074_10386224	Not Available	583	Open in IMG/M
3300028379\|Ga0268266_10780737	Not Available	922	Open in IMG/M
3300028379\|Ga0268266_11397427	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	675	Open in IMG/M
3300028380\|Ga0268265_12321604	Not Available	543	Open in IMG/M
3300028381\|Ga0268264_10163554	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia	2007	Open in IMG/M
3300028587\|Ga0247828_10397295	Not Available	792	Open in IMG/M
3300028587\|Ga0247828_10451143	Not Available	753	Open in IMG/M
3300028705\|Ga0307276_10071742	Not Available	801	Open in IMG/M
3300028707\|Ga0307291_1126111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	646	Open in IMG/M
3300028713\|Ga0307303_10132158	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	590	Open in IMG/M
3300028790\|Ga0307283_10108247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	733	Open in IMG/M
3300028889\|Ga0247827_10266069	Not Available	984	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	62.90%
Environmental	Environmental	37.10%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	62.90%
Terrestrial	Environmental → Terrestrial	37.10%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	39.52%
Soil	Environmental → Terrestrial → Soil	37.10%
Rhizoplane	Host-Associated → Plants → Rhizoplane	20.16%
Roots	Host-Associated → Plants → Roots	3.23%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	23.39%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	18.55%
Loam	Environmental → Terrestrial → Soil → Loam	18.55%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	18.55%
Soil	Host-Associated → Plants → Rhizosphere → Soil	16.13%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	3.23%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.81%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	23.39%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	18.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	17.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	16.13%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.71%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	3.23%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.42%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.42%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	9.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.87%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.06%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.45%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	5.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	5.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	5.65%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	4.84%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	4.84%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	4.03%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.03%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	4.03%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	4.03%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.03%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.42%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	1.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.81%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.81%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.81%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013104	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028790	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_122	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0063454_1001637972	3300004081	Soil	GTLGPSCDWNHSPDEPVESYTVDINTRGGVELAFGQPRTTVVEVAGFGALATPGRYSSGEHECIINIDVASGQAVQVGYFYNGSTLPMNHEIACQKARNAAELAMQTILARAGG*
Ga0062595_1016078132	3300004479	Soil	CDWIHSPTEPIENYSVDINTRGGVELVFGQSRLQVTTVAGFGAVQTPALYGTGEQDCLVNVDVGPSQAVQVGYFYSGQTVPMTHEIACQKARNAAELAMQTILAQAG*
Ga0070683_1020355711	3300005329	Corn Rhizosphere	SLGIARYGASPANGKQGPACDWIHSPREPIENYSVGINTRGGVELVFGQPELEVINVAGFGAVQTPALYGSGNQDCVVNVDVAPSQAVQVAYFYNGQTVPMTHEIACRKARNAAELAMQTILAQAG*
Ga0070670_1007878572	3300005331	Switchgrass Rhizosphere	NTRGGVELALERPQLEVITVAGFGAVSTPALFSSGERDCIVNVDVAPSQAVQISYFYRGSTVPMNHEIACQKARNAAELVMQTILARAGG*
Ga0070682_1002808621	3300005337	Corn Rhizosphere	ERPQLEVITVAGFGAVSTPALFSSGERDCIVNVDVAPSQAVQISYFYRGSTVPMNHEIACQKARNAAELVMQTILARAGG*
Ga0070689_1004885941	3300005340	Switchgrass Rhizosphere	ALNKRGPGCQWVHSPYEPVEAYTVAINTDGGVELAFGQPELQVIAIAGFGAVQTPGLYSSGKNDCIVEVDVAPRQAVQVGYFYNGSTVPMNHEIACQKARNAAELVMQTILARAGG*
Ga0070689_1019090992	3300005340	Switchgrass Rhizosphere	FGQPQLQVTTVAGFGAVQTPALYGTGKQDCVVNVDVAPGQAVQVGYFYNGTAVPMTHEIACQKARHAAELAMQTILARSG*
Ga0070675_1017093652	3300005354	Miscanthus Rhizosphere	EPLESYSLDINTRGGVELVFGSAQLQVTTVAGFGAVQTPAPYGSSTQNCVVNVDVAPSQAVQVAYFYNGQTVPMTHEIACQKARNAAELAMQTILAQAG*
Ga0070671_1020091422	3300005355	Switchgrass Rhizosphere	QLQVTTVAGFGAVQTPAPYGGSTQNCVVNVDVAPSQAVQVAYFYNGQTVPMTHEIACGKARNAAELAIQTILAQAG*
Ga0070674_1007541933	3300005356	Miscanthus Rhizosphere	GGVELVFGSAQLQVTTVAGFGAVQTPAPYGGSTQNCVVNVDVAPSQAVQVAYFYNGQTVPMTHELACQKARNAAELAMQTILTQAG*
Ga0070667_1008784632	3300005367	Switchgrass Rhizosphere	ELVFGQPRVAVVEVAGFGALSTPGRYSAGEHECIINVDVASGQALQVGYFYNGSTVPMNHEIACQKARNAAELAMQTILARAGG*
Ga0070703_104041322	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	WDHYPSEPIEHYSVGINTRGGVELVFGQPQLKITTIAGFGAVQTPGLYSNGERDCVVNVDVAPSQAVQVAYFYNGQTVPMTHEIACQKARNAAELAMQTILAQAG*
Ga0070713_1023379791	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	QLKSLGVRLYSTDPPTGNLGPSCDWNHSPGEPVESYTVDINTRGGVELVFGQPQLAVTTVAGFGAVTTPGRYSSGEHECVINIDVAPAQAVQVGYFYNGSTVPMTHEIACQKARNAAGLAMQTILAKSGG*
Ga0070700_1001164311	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	QLEVITVAGFGAVSTPALFSSGERDCIVNVDVAPSQAVQISYFYRGSTVPMNHEIACQKARNAAELAMQTILARAGG*
Ga0070663_1001769572	3300005455	Corn Rhizosphere	GVELAFNQPQLNIISVAGFGAVETPGQLSSGERDCIVSIDVATGQAVQVNYFYNGSTVPMNHEIACQKARNAAELAMQTILARAGG*
Ga0070678_1004922832	3300005456	Miscanthus Rhizosphere	TQAKSLGIARYGASPANGKQGPACDWIHSPREPIENYSVGINTRGGVELVFGQPHLEVTTVAGFGAVQTPGLYRVGDRDCVVNVDVAPSQAVQVAYFYNGQTVPMTHEIACRKARNAAELAMQTILAQAG*
Ga0070662_1006824532	3300005457	Corn Rhizosphere	YSVGINTRGGVELVFGQPELEVINVAGFGAVQTPALYGSGNQDCVVNVDVAPSQAVQVAYFYNGQTVPMTHELACRKARNAAELAMQTILAQAG*
Ga0070662_1013494562	3300005457	Corn Rhizosphere	VHSPSEPVETYSVDINTRGGVELAFDRPQLDVITIAGFGAVSTPGLFSSGERDCIVNVDVAPSQSVQISYFYRGSTMPMNHEIACQKARNAAELAMQTILARKGG*
Ga0070685_100427753	3300005466	Switchgrass Rhizosphere	TTDQPLDKRGPGCQWVHSPYEPVEAYTVAINTDGGVELAFGQPELQVIAVAGYGAVQTPGLYSSGKKDCIVEVDVAPRQAVQVGYFYNGSTVPMNHEIACQKARNAAELAMRTILARAGG
Ga0070685_103258571	3300005466	Switchgrass Rhizosphere	KVAGFGAVQSPGLYSKGDDNCFIHVDVAPGEAVQVGYIYNGSTVPMNHEIACQKARNAAELAMQTILARAGG*
Ga0070684_1016049112	3300005535	Corn Rhizosphere	PGCEWIHSPTEPVEHYSVGINTRGGVELVFGQPELEVINVAGFGAVQTPALYGSGNQDCVVNVDVAPSQAVQVAYFYNGQTVPMTHELACRKARNAAELAMQTILAQAG*
Ga0068853_1013621372	3300005539	Corn Rhizosphere	HSPYEPVEAYTVAINTDGGVELAFGQPELQVIAIAGFGAVQTPGLYSSGKNDCIVEVDVAPRQAVQVGYFYNGSTVPMNHEIACQKARNAAELAMQTILARAGG*
Ga0070665_1001135001	3300005548	Switchgrass Rhizosphere	SLGIARYGASPPNGKQGPSCDWIHSPSEPIENYSVGINTRGGVELVFGEPQLEVTAVAGFGAVQTPGLYRLGDRDCVVNVDVAPSQAVQVGYFYNGQTVPMTHELACLKARNAAELAMQTILTQAG*
Ga0068855_1023134742	3300005563	Corn Rhizosphere	WIHSPTEPIEHYSVGINTRGGVELVFGQPQLEVTSVAGFGAVQAPALYGSGNQDCVVNVDVAPSQAVQVAYFYNGQTVPMTHEIACQKARNAAELAMQTILAQAG*
Ga0070664_1008182502	3300005564	Corn Rhizosphere	GVELVFSQPELNAITIEGFGAVETPGLYSSGENDCVVMVDVAPHQAVQVAYSYNGSTVPMNHEIACQKARNAAELAMQTILARAGG*
Ga0068857_1000860224	3300005577	Corn Rhizosphere	LDKRGPGCQWVHSPYEPVEAYTVAINTDGGVELAFGQPELQVIAIAGFGAVQTPGLYSSGKNDCIVEVDVAPRQAVQVGYFYNGSTVPMNHEIACQKARNAAELVMQTILARAGG*
Ga0068856_1002593542	3300005614	Corn Rhizosphere	VAGYGAVQTPGLYSSGKNDCIIEVDVAPRQAVQVGYFYNGSTVPMNHEIACQKARNAAELAMQTILARAGG*
Ga0068856_1005327381	3300005614	Corn Rhizosphere	SPTEPIENYSVDINTRGGVELVFGQSRLQVTTVAGFGAVQTPALYGTGEQDCLVNVDVGPSQAVQVGYFYSGQTVPMTHEIACQKARNAAELAMQTILAQAG*
Ga0070702_1004189251	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	FGQPQLEVTSVAGFGAVQTPALYGSGKQDCVVNVDVAPSQAVQVGYFYNGTTVPMTHEIACQKARNAAELAMQTILAQAG*
Ga0068852_1015278392	3300005616	Corn Rhizosphere	DHYPAEPIEHYSVGINTRGGVELAFGQPQLEVTTIAGFGAVQTPGLYSNGERDCVVNVDVAPSQAVQVGYFYNGQTVPMTHELACQKARNAAELAMQTILTQAG*
Ga0068861_1017371082	3300005719	Switchgrass Rhizosphere	VELAFGQPELQVIAIAGYGAVQTPGLYSSGKKDCIVEVDVAPRQAVQVGYFYNGSTVPMNHEIACQKARNAAELAMQTILARAGG*
Ga0068863_1018670541	3300005841	Switchgrass Rhizosphere	ELQVTTVAGFGAVQTPALYGTGEQDCLVNVDVGPSQAVQVGYFYNGQTVPMTHEIACGKARNAAELAMQTILAQAG*
Ga0068863_1024374692	3300005841	Switchgrass Rhizosphere	RGGVELVFGQPELEVINVAGFGAVQTPALYGSGNQDCVVNVDVAPSQAVQVAYFYNGQTVPMTHEIACRKARNAAELAMQTILAQAG*
Ga0068858_1005307151	3300005842	Switchgrass Rhizosphere	VAVNTQGGVELLFGQPQIDVVKVAGFGAVQSPGLYSTGDDNCFIHVDVAPGEAVQVGYIYNGSTVPMNHEIACQKARNAAELVMQTILARAGG*
Ga0068858_1009384682	3300005842	Switchgrass Rhizosphere	LEVINVAGFGAVQTPALYGSGNQDCVVNVDVAPSQAVQVAYFYNGQTVPMTHEIACGKARNAAELAMQTILAQAG*
Ga0068858_1009853172	3300005842	Switchgrass Rhizosphere	DHYPSEPLESYSRDINTRGGVELVFGSAQLQVTTVAGFGAVQTPAPYGGNTQNCVVNVDVAPSQAVQVGYFYNGQTVPMTHELACQKARNAAELAMQTILTQAG*
Ga0068860_1016317591	3300005843	Switchgrass Rhizosphere	TRGPGCEWVHSPSEPVETYSVDINTRGGVELAFDRPQLDVITIAGFGAVSTPGLFSSGERDCIVNVDVAPSQSVQISYFYRGSTMPMNHEIACQKARNAAELAMQTILARKGG*
Ga0068862_1005528981	3300005844	Switchgrass Rhizosphere	AGFGAVQTPGLYSNGERDCVVNVDVAPSQAVQVAYFYNGQTVPMTHEIACQKARNAAELAMQTILAQAG*
Ga0070717_105693251	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	GINTRGGVELAFGQPQLEVTTVAGFGAVETPGLYSSGGRDCVVNVDVAPSQAVQVGYFYNGASVPMTHELACQKARHAAELAMQTILARAGS*
Ga0070716_1018290922	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	DINTRGGVELAFDRPRLDVITIAGFGAVSTPGLYSSGERDCIVNVDVAPSQSVQISYFYRGSTVPMNHEIACQRARNAAELAMQTILARAGG*
Ga0070712_1007652911	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	GQPQLAVTTVAGFGAVTTPGRYSSGEHECVINIDVAPAQAVQVGYFYNGSTVPMTHEIACQKARNAAGLAMQTILAKSGG*
Ga0097621_1011122712	3300006237	Miscanthus Rhizosphere	QPELQVIAIAGFGAVQTPGLYSSGKNDCIVEVDVAPRQAVQVGYFYNGSTVPMNHEIACQKARNAAELAMQTILARAGG*
Ga0068871_1017630482	3300006358	Miscanthus Rhizosphere	PSEPIENYSVGINTRGGVELVFGQPQLQVTTIAGFGAVQSPGLYRVGDRDCVVNVDVAPSQAVQVAYFYNGQTVPMTHEIACQKARNAAELAMQTILAQTG*
Ga0079221_110450551	3300006804	Agricultural Soil	VAGFGARVTPGRYSSGEHECIVNVEVATGQALQVGCFYNGANVPMNHEIACRKARNAAEMAMQTIQTKIGT*
Ga0068865_1004760071	3300006881	Miscanthus Rhizosphere	ESLDVKFYTTDKPREKRGPGCDWIHSPAEPIESYTVAVNTQGGVELLFGQPQIDVVKVAGFGAVQSPGLYSKGDDNCFIHVDVAPGEAVQVGYIYNGSTVPMNHEIACQKARNAAELVMQTILARAGG*
Ga0105251_104171271	3300009011	Switchgrass Rhizosphere	CQWVHSPYEPVEAYTVAINTDGGVELAFGQPELQVIAIAGFGAVQTPGLYSSGKNDCIVEVDVAPRQAVQVGYFYNGSTVPMNHEIACQKARNAAELVMQTILARAGG*
Ga0105240_108402131	3300009093	Corn Rhizosphere	LVFGQPRVAVVEVAGFGALSTPGRYSAGEHECIINVDVASGQALQVGYFYNGSTVPMNHEIACQKARNAAELVMQTILARAGG*
Ga0111539_113415592	3300009094	Populus Rhizosphere	SVGINTRGGVELAFGQPQLEVTTIAGFGAVQTPGLYSNGERDCVVNVDVAPSQAVQVAYFYNGQTVPMTHEIACRKARNAAELAMQTILAQAG*
Ga0111539_115018572	3300009094	Populus Rhizosphere	PRSAVVEVAGFGALATPGRFGSGEHECIINVDVASGQAVQIGYFYNGSTVPMNHEIACQKARNAAELAMQTILARAGG*
Ga0105247_103537601	3300009101	Switchgrass Rhizosphere	AGKRGPSCDWIHSPTEPIENYSVDINTRGGVELVFGQSRLQVTTVAGFGAVQTPALYGTGEQDCLVNVDVGPSQAVQVGYFYSGQTVPMTHEIACQKARNAAELAMQTILAQAG*
Ga0111538_111467321	3300009156	Populus Rhizosphere	DVISVAGFGAVETPGLLTTGERDCIVSIDVAAGQAVQVNYFYNGSTVPMNHEIACQKARNAAELAMQTILARAGG*
Ga0105241_117603722	3300009174	Corn Rhizosphere	DINTRGGVELVFGQPELQVTTVAGFGAVQTPALYGTGEQDCLVNVDVGPSQAVQVGYFYNGQTVPMTHEIACGKARNAAELAMQTILAQAG*
Ga0105248_113677251	3300009177	Switchgrass Rhizosphere	PQLEVITVAGFGAVSTPALFSSGERDCIVNVDVAPSQAVQISYFYRGSTVPMNHEIACQKARNAAELVMQTILARAGG*
Ga0105237_121423061	3300009545	Corn Rhizosphere	LGIARYGASPPNGKQGPSCDWIHSPSEPIENYSVGINTRGGVELVFGEPQLEVTAVAGFGAVQTPGLYRLGDRDCVVNVDVAPSQAVQVGYFYNGQTVPMTHELACQKARNAAELAMQTILTQAG*
Ga0105237_127609472	3300009545	Corn Rhizosphere	AGFGAVQTPALYGTGEQDCLVNVDVGPSQAVQVGYFYNGQTVPMTHEIACGKARNAAELAIQTILAQAG*
Ga0105249_105362161	3300009553	Switchgrass Rhizosphere	PQLDVITIAGFGAVSTPGLFSSGERDCIVNVDVAPSQSVQISYFYRGSTMPMNHEIACQKARNAAELAMQTILARKGG*
Ga0134125_102446231	3300010371	Terrestrial Soil	IAFGQPKLDVTSVAGFGAVETPGQFSSGERDCIVNVDVASGQAVQVNYFYNGSTVPMNHEIACQKARNAAELAMQTILAKIGG*
Ga0134128_108353971	3300010373	Terrestrial Soil	PVESYSIDVNTQGGVELAFNQPQLNVISIAGFGAVETPGQLSSGERDCIVSIDVAAGQAVQVNYFYNGSTLPMNHEIACEKARNAAELAMQTILARAGG*
Ga0134126_108636022	3300010396	Terrestrial Soil	AIAGFGAVQTPGLYSSGKNDCIVEVDVAPRQAVQVGYFYNGSTVPMNHEIACQKARNAAELAMQTILARAGG*
Ga0134126_112133652	3300010396	Terrestrial Soil	GGVELVFGQPQLEVTSVAGFGAVQAPALYGSGNQDCVVNVDVAPSQAVQVAYFYNGQTVPMTHEIACQKARNAAELAMQTILAQAG*
Ga0134127_126270371	3300010399	Terrestrial Soil	QLEVTSVAGFGAVQAPALYGSGNQDCVVNVDVAPSQAVQVAYFYNGQTVPMTHEIACQKARNAAELAMQTILAQAG*
Ga0134122_117614222	3300010400	Terrestrial Soil	FGQPALQVIVVAGYGAVQTPGLYSSGKNDCIIEVDVAPRQAVQVGYFYNGATVPMNHEIACQKARNAAELAMQTILARKGG*
Ga0134123_105712601	3300010403	Terrestrial Soil	QPQIDVVKVAGFGAVQSPGLYSTGDDNCFIHVDVAPRESVQVGYIYNGSTVPMNHEIACQKARNAAELAMQTILARAGG*
Ga0105246_104161621	3300011119	Miscanthus Rhizosphere	TVDINTRGGVELAFEQPRSTVVEVAGFAALATPGRFSSGEHECIINVDVASGQAVQIGYFYNGSTVPMNHEIACQKARNAAELVMQTILARAGG*
Ga0105246_111893251	3300011119	Miscanthus Rhizosphere	PVEAYTVAINTDGGVELAFGQPQLQVITVAGYGAVETPGLYSSGRNDCIVEVDVAPGQAVQVGYFYNGSTVPMTHEIACQKARNAAELAMQTIQAKIGG*
Ga0150985_1191449552	3300012212	Avena Fatua Rhizosphere	MQLKTLDVRFYTTDKPREKRGPGCDWIHSPTEPIESYTVAVNTQGGVELLFGQPKTDVVRVAGFGAVQSPGLYSTGDDNCFIHVDVAPGEAVQVGYIYNGSTVPMNHEIACEKARNAAELAMQTIQATIDR*
Ga0150984_1064720422	3300012469	Avena Fatua Rhizosphere	VHSPSEPVETYSVDINTRGGVELMFERPQLEVITIAGFGAVSTPALFSSGERDCIVNVDVAPSRSVQISYFYRGSTVPMNHEIACQKARNAAELAMQTILARAGG*
Ga0164303_111662851	3300012957	Soil	YAASKPVGTRGPGCDWDHFPSEPIEHYSIGINTGGGVELVFGQPQLEVTTVAGFGAVETPGLYSSGGRDCVVNVDVAPSQAVQVGYFYNGASVPMTHELACQEARHAAELAMQTILARAGS*
Ga0164299_106260381	3300012958	Soil	ASLQVRYSTTDEALDKRGPGCQWVHSPYEPVEAYTVAINTEGGVELAFGQPELQVIAIAGFGAVQTPGLYSSGKNDCIVEVDVAPRQAVQVGYFYSGSTIPMNHEIACQKARNAAELAMQTILARAGG*
Ga0164308_119689061	3300012985	Soil	SRLQVTTVAGFGAVQTPALYGTGEQDCLVNVDVGPSQAVQVGYFYSGQTVPMTHEIACQKARNAAELAMQTILAQAG*
Ga0164305_101474032	3300012989	Soil	VHSPYEPVEAYTVAINTDGGVELAFGQPALQVIVVAGYGAVQTPGLYSSGKNNCIIEVDVAPHQAVQVGYFYNGSTVPMNHEIACQKARNAAELAMQTILARAGG*
Ga0164305_103023241	3300012989	Soil	GGVELVFGQSRLQVTTVAGFGAVQTPALYGTGEQDCLVNVDVGPSQAVQVGYFYSGQTVPMTHEIACQKARNAAELAMQTILAQAG*
Ga0157371_108603412	3300013102	Corn Rhizosphere	LGVGVERHGERGGVELALERPQLEVITVAGFGAVSTPALFSSGERDCIVNVDVAPSQAVQISYFYRGSTVPMNHEIACQKARNAAELVMQTILARAGG*
Ga0157370_112769632	3300013104	Corn Rhizosphere	MAQHRRLGVVEGLRHRLGGGVELALERPQLEVITVAGFGAVSTPALFSSGERDCIVNVDVAPSQAVQISYFYRGSTVPMNHEIACQKARNAAELAMQTILARAGG*
Ga0157369_106332031	3300013105	Corn Rhizosphere	VAGFGAVQSPGLYSTGDDNCFIHVDVAPGEAVQVGYIYNGSTVPMNHEIACQKARNAAELVMQTILARAGG*
Ga0157369_117295022	3300013105	Corn Rhizosphere	GPGCEWIHSPTEPVEHYSVGINTRGGVELVFGQPELEVINVAGFGAVQTPALYGSGNQDCVVNVDVAPSQAVQVAYFYNGQTVPMTHEIACRKARNAAELAMQTILAQAG*
Ga0157374_119498261	3300013296	Miscanthus Rhizosphere	RGGVELVFNQPRLDIISVVGLGAVETPALFSSGKNECIVNIDVAPGQAVQVSYFYDGATVPMNHELACQKARNAAELAMQTILAKIGG*
Ga0157378_110627662	3300013297	Miscanthus Rhizosphere	AINTRGGVELVFSQPELKPITIEGFGAVETPGLYSTGENDCVVMVDVAPHQAVQVAYSYNGSTVPMNHEIACQKARNAAELAMQTILARAGG*
Ga0157378_117070711	3300013297	Miscanthus Rhizosphere	VDINTRGGVELALERPQLEVITVAGFGAVSTPALFSSGERDCIVNVDVAPSQAVQISYFYRGSTVPMDHEIACQKARNAAELVMQTILARAGG*
Ga0163162_118321471	3300013306	Switchgrass Rhizosphere	GVELVFGQSRLQVTTVAGFGAVQTPALYGTGEQDCLVNVDVGPSQAVQVGYFYSGQTVPMTHEIACQKARNAAELAMQTILAQAG*
Ga0157372_112608551	3300013307	Corn Rhizosphere	YPSEPIEHYSVGINTRGGVELVFGQPQLKITTIAGFGAVQTPGLYSNGERDCVVNVDVAPSQAVQVAYFYNGQTVPMTHEIACQKARNAAELAMQTILAQAG*
Ga0163163_101547971	3300014325	Switchgrass Rhizosphere	ASPANGKQGPACYWIHSPREPIENYSVGINTRGGVELAFGQPQLEVTTIAGFGAVQTPGLYSNGERDCVVNVDVAPSQAVQVAYFYNGQTVPMTHEIACGKARNAAELAMQTILAQAG*
Ga0163163_105216272	3300014325	Switchgrass Rhizosphere	SPSEPVETYSVDINTRGGVELALERPQLEVITVAGFGAVSTPALFSSGERDCIVNVDVAPSQAVQISYFYRGSTVPMNHEIACQKARNAAELVMQTILARAGG*
Ga0157377_115950441	3300014745	Miscanthus Rhizosphere	AVNTQGGVELLFGQPQIDVVKVAGFGAVQSPGLYSTGDDNCFIHVDVAPREAVQVGYIYNGSTVPMNHEIACQKARNAAELVMQTILARAGG*
Ga0157376_128981722	3300014969	Miscanthus Rhizosphere	GVELVFGQPHVAVVEVAGFGALSTPGRYSAGEHECIINVDVASGQALQVGYFYNGSTVPMNHEIACQRARNAAELAMQTILARAGG*
Ga0173481_107106082	3300019356	Soil	NKRGPGCQWVHSPYEPVEAYTVAINTDGGVELAFGQPELQVIAIAGFGAVQTPGLYSSGKNDCIVEVDVAPLQAVQVGYFYNGSTVPMNHEIACQKARNAAELVMQTILARAGG
Ga0207692_108605392	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	QPQLEVITVAGFGAVQTPALYGTGKQDCVVNVDVAPSQAVQVGYFYNGASVPMTHELACQKARHAAELAMQTILARAGS
Ga0207688_100045218	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	VHSPSEPVETYSVDINTRGGVELALERPQLEVITVAGFGAVSTPALFSSGERDCIVNVDVAPSQAVQISYFYRGSTVPMNHEIACQKARNAAELVMQTILARAGG
Ga0207699_106072571	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	LEVTTVAGFGAVETPGLYSSGGRDCVVNVDVAPSQAVQVGYFYNGASVPMTHELACQKARHAAELAMQTILARAGS
Ga0207645_103310972	3300025907	Miscanthus Rhizosphere	PELQVIAIAGFGAVQTPGLYSSGKNDCIVEVDVAPRQAVQVGYFYNGSTVPMNHEIACQKARNAAELVMQTILARAGG
Ga0207654_105229381	3300025911	Corn Rhizosphere	PITIEGFGAVETPGLYSSGENDCVVMVDVAPHQAVQVAYSYNGSTLPMNHEIACQRARNAAELAMQTILARAGG
Ga0207654_112154962	3300025911	Corn Rhizosphere	VAGFGAVQAPALYGSGNQDCVVNVDVAPSQAVQVAYFYNGQTVPMTHEIACQKARNAAELAMQTILAQAG
Ga0207671_114800292	3300025914	Corn Rhizosphere	EPVEAYTVAINTDGGVELAFGQPELQVIAIAGFGAVQTPGLYSSGKNDCIVEVDVAPRQAVQVGYFYNGSTVPMNHEIACQKARNAAELAMQTILARAGG
Ga0207660_117022971	3300025917	Corn Rhizosphere	IHSPAEPIESYTVAVNTQGGVELLFGQPQIDVVKVAGFGAVQSPGLYSTGDDNCFIHVDVAPGEAVQVGYIYNGSTVPMNHEIACQKARNAAELAMQTILARAGG
Ga0207649_102498212	3300025920	Corn Rhizosphere	LNAITIEGFGAVETPGLYSSGENDCVVMVDVAPHQAVQVAYSYNGSTVPMNHEIACQKARNAAELAMQTILARAGG
Ga0207650_107447511	3300025925	Switchgrass Rhizosphere	LALERPQLEVITVAGFGAVSTPALFSSGERDCIVNVDVAPSQAVQISYFYRGSTVPMNHEIACQKARNAAELVMQTILARAGG
Ga0207659_111604491	3300025926	Miscanthus Rhizosphere	EPLESYSLDINTRGGVELVFGSAQLQVTTVAGFGAVQTPAPYGSSTQNCVVNVDVAPSQAVQVAYFYNGQTVPMTHEIACRKARNAAELAMQTILAQAG
Ga0207687_103323162	3300025927	Miscanthus Rhizosphere	QPELNAITIEGFGAVETPGLYSSGENDCVVMVDVAPHQAVQVAYSYNGSTVPMNHEIACQKARNAAELAMQTILARAGG
Ga0207687_104844411	3300025927	Miscanthus Rhizosphere	LDPCNALTSAQLESLDVKFYTTDKPREKSGPGCDWIHSPAEPIESYTVAVNTQGGVELLFGQPQIDVVKVAGFGAVQSPGLYSTGDDNCFIHVDVAPREAVQVGYIYNGSTVPMNHEIAC
Ga0207706_100392734	3300025933	Corn Rhizosphere	LVFGQPQLKITTIAGFGAVQTPGLYSNGERDCVVNVDVAPSQAVQVAYFYNGQTVPMTHEIACQKARNAAELAMQTILAQAG
Ga0207686_111728101	3300025934	Miscanthus Rhizosphere	IAGFGAVQTPGLYSNGEHDCVVNVDVAPSQAVQVAYFYNGQTVPMTHEIACQKARNAAELAMQTILAQAG
Ga0207670_108565471	3300025936	Switchgrass Rhizosphere	ALNKRGPGCQWVHSPYEPVEAYTVAINTDGGVELAFGQPELQVIAIAGFGAVQTPGLYSSGKNDCIVEVDVAPRQAVQVGYFYNGSTVPMNHEIACEKARNAAELAMQTILARAGG
Ga0207670_113359092	3300025936	Switchgrass Rhizosphere	MQEARETAAFQSACQSPSIENYSVDINTRGGVELVFGQPRLQVTTVAGFGAVQTPALYGTGEQDCLVNVDVGPSQAVQVGYFYNGQTVPMTHEIACGKARNAAELAMQTILAQAG
Ga0207691_112440732	3300025940	Miscanthus Rhizosphere	GGVELVFGSAQLQVTTVAGFGAVQTPAPYGGSTQNCVVNVDVAPSQAVQVAYFYNGQTVPMTHEIACGKARNAAELAMQTILAQAG
Ga0207661_120217701	3300025944	Corn Rhizosphere	VELVFGQPELEVINVAGFGAVQTPALYGSGNQDCVVNVDVAPSQAVQVAYFYNGQTVPMTHEIACRKARNAAELAMQTILAQAG
Ga0207658_117656452	3300025986	Switchgrass Rhizosphere	ELVFGQPRVAVVEVAGFGALSTPGRYSAGEHECIINVDVASGQALQVGYFYNGSTVPMNHEIACQKARNAAELAMQTILARAGG
Ga0207703_103701162	3300026035	Switchgrass Rhizosphere	EPIEHYSVGINTRGGVELVFGQPQLEVTSVAGFGAVQAPALYGSGNQDCVVNVDVAPSQAVQVAYFYNGQTVPMTHEIACQKARNAAELAMQTILAQAG
Ga0207708_100026601	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	GQSRLQVTTVAGFGAVQTPALYGTGEQDCLVNVDVGPSQAVQVGYFYSGQTVPMTHEIACQKARNAAELAMQTILAQAG
Ga0207708_100650514	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	PQLEVITVAGFGAVSTPALFSSGERDCIVNVDVAPSQAVQISYFYRGSTVPMNHEIACQKARNAAELVMQTILARAGG
Ga0207641_119187521	3300026088	Switchgrass Rhizosphere	TEPVEHYSVGINTRGGVELVFGQPELEVINVAGFGAVQTPALYGSGNQDCVVNVDVAPSQAVQVAYFYNGQTVPMTHEIACRKARNAAELAMQTILAQAG
Ga0207648_104180432	3300026089	Miscanthus Rhizosphere	HSPSEPIENYSVGINTRGGVELVFGQPQIQVTTIAGFGAVQTPGLYRVGDRDCVVNVDVAPSQAVQVAYFYNGQTVPMTHEIACQKARNAAELAMQTILAQAG
Ga0207698_121065962	3300026142	Corn Rhizosphere	EHYSVGINTRGGVELVFGQPELEVINVAGFGAVQTPALYGSGNQDCVVNVDVAPSQAVQVAYFYNGQTVPMTHELACRKARNAAELAMQTILAQAG
Ga0209074_103862242	3300027787	Agricultural Soil	IDANTRGGVELVFGQARLDVVRIAGFGAVETPALFSRGEHECIINVDVAPGQAVQISYFYDGSTVPMNHEIACQKARNAAELAMQTILARAGG
Ga0268266_107807371	3300028379	Switchgrass Rhizosphere	QAKSLGIARYGASPPNGKQGPSCDWIHSPSEPIENYSVGINTRGGVELVFGEPQLEVTAVAGFGAVQTPGLYRLGDRDCVVNVDVAPSQAVQVGYFYNGQTVPMTHELACLKARNAAELAMQTILTQAG
Ga0268266_113974271	3300028379	Switchgrass Rhizosphere	NYSVDINTRGGVELVFGQSRLQVTTVAGFGAVQTPALFGTGEQDCLVNVDVGPSQAVQVGYFYSGQTVPMTHEIACQKARNAAELAMQTILAQTG
Ga0268265_123216041	3300028380	Switchgrass Rhizosphere	HYSIGINTRGGVELIFGQPQLQVTTVAGFGAVQTPALYGTGKQDCVVNVDVAPGQAVQVGYFYNGTTVPMTHEIACQKARHAAELAMQTILARSG
Ga0268264_101635543	3300028381	Switchgrass Rhizosphere	GTRGPGCEWVHSPSEPVETYSVDINTRGGVELAFDRPQLDVITIAGFGAVSTPGLFSSGERDCIVNVDVAPSQSVQISYFYRGSTMPMNHEIACQKARNAAELAMQTILARKGG
Ga0247828_103972951	3300028587	Soil	YSINVNTQGGVELAFGQPQLDVISVAGFGAVETPGLLTTGERDCIVSIDVAAGQAVQVNYFYNGSTVPMNHEIACQKARNAAELAMQTILARAGG
Ga0247828_104511432	3300028587	Soil	SYTVDINTRGGVELVFGQPRVAVVEVAGFGALSTPGRYSSGEHECIINVDVSSGQAVQVGYFYNGSTVPMNHEIACQKARNAAELAMQTILARAGG
Ga0307276_100717422	3300028705	Soil	DLQVIAIAGFGAVQTPGLYSSGKNDCIVEVDVAPRQAVQVGYFYNGSTVPMNHEMACQKARNAAELAMQTILARAGG
Ga0307291_11261111	3300028707	Soil	PPAGKRGPSCDWIHSPTEPIENYSVDINTRGGVELVFGQSRLQVTTVAGFGAVQTPALYGTGEQDCLVNVDVGPSQAVQVGYFYSGQTVPMTHEIACQKARNAAELAMQTILAQAG
Ga0307303_101321581	3300028713	Soil	TEPIEHYSVGINTRGGVELVFGQPQLEVTSVAGFGAVQAPALYGSGNQDCVVNVDVAPSQAVQVAYFYNGQTVPMTHEIACQKARNAAELAMQTILAQAG
Ga0307283_101082471	3300028790	Soil	RGGVELVFGQPQLEVTTVAGFGAVQTPGLYSKGERDCVVNVDVAPAQAVQVGYFYNGSTVPMTHEIACQKARRAAELAMQTILARAG
Ga0247827_102660692	3300028889	Soil	RGPGCEWIHSPTEPVEHYSVGINTRGGVELVFGQAQLEVTSVAGFGAVQAPAVYGSGNQDCVVNVDVAPSQAVQVAYFYNGQTIPMTHEIACQKARNAAELAMQTILAQTG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F069209

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences