Metagenome / Metatranscriptome Family F069204

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F069204
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	61 residues
Representative Sequence	MRAIKKAKAFEDPLFVEPTAWAPLYGAWQERAKSTRALAERAANDRAKKLLLIVADGYDRLAK
Number of Associated Samples	61
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	82.11 %
% of genes near scaffold ends (potentially truncated)	33.87 %
% of genes from short scaffolds (< 2000 bps)	95.97 %
Associated GOLD sequencing projects	53
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.55

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (85.484 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland (50.000 % of family members)
Environment Ontology (ENVO)	Unclassified (57.258 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (78.226 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.45% β-sheet: 0.00% Coil/Unstructured: 50.55%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.55
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.55
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF09361	Phasin_2	4.03
PF05443	ROS_MUCR	1.61
PF01316	Arg_repressor	1.61
PF01610	DDE_Tnp_ISL3	0.81
PF10073	DUF2312	0.81
PF01694	Rhomboid	0.81
PF00293	NUDIX	0.81
PF03142	Chitin_synth_2	0.81
PF00011	HSP20	0.81
PF01609	DDE_Tnp_1	0.81
PF07311	Dodecin	0.81
PF00696	AA_kinase	0.81
PF04226	Transgly_assoc	0.81
PF08448	PAS_4	0.81
PF13586	DDE_Tnp_1_2	0.81
PF13551	HTH_29	0.81
PF01575	MaoC_dehydratas	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG1438	Arginine repressor	Transcription [K]	1.61
COG4957	Predicted transcriptional regulator	Transcription [K]	1.61
COG0071	Small heat shock protein IbpA, HSP20 family	Posttranslational modification, protein turnover, chaperones [O]	0.81
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	0.81
COG1215	Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase	Cell motility [N]	0.81
COG2261	Uncharacterized membrane protein YeaQ/YmgE, transglycosylase-associated protein family	General function prediction only [R]	0.81
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.81
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.81
COG3360	Flavin-binding protein dodecin	General function prediction only [R]	0.81
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.81
COG3464	Transposase	Mobilome: prophages, transposons [X]	0.81
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.81
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.81
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.48 %
All Organisms	root	All Organisms	14.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.48 %
cellular organisms	root	All Organisms → cellular organisms	14.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.48 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	14.52 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.48 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	8.87 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.48 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8.06 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.48 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.65 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	1.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.48 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1.61 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	1.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.48 %
Candidatus Lloydbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Lloydbacteria	1.61 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.48 %
Candidatus Lloydbacteria bacterium RIFCSPLOWO2_01_FULL_50_20	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Lloydbacteria → Candidatus Lloydbacteria bacterium RIFCSPLOWO2_01_FULL_50_20	1.61 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	85.48 %
Candidatus Lloydbacteria bacterium RIFCSPLOWO2_01_FULL_50_20	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Lloydbacteria → Candidatus Lloydbacteria bacterium RIFCSPLOWO2_01_FULL_50_20	1.61 %
Bradyrhizobium sp. Ai1a-2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ai1a-2	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573004\|GZGWRS401A3ASK	Not Available	520	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101414995	Not Available	808	Open in IMG/M
3300000579\|AP72_2010_repI_A01DRAFT_1071701	Not Available	514	Open in IMG/M
3300000789\|JGI1027J11758_11793607	Not Available	589	Open in IMG/M
3300000955\|JGI1027J12803_105799663	Not Available	906	Open in IMG/M
3300003152\|Ga0052254_1045053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Ai1a-2	667	Open in IMG/M
3300003861\|Ga0031654_10133680	Not Available	700	Open in IMG/M
3300006052\|Ga0075029_101348714	Not Available	502	Open in IMG/M
3300006059\|Ga0075017_101578824	Not Available	518	Open in IMG/M
3300006174\|Ga0075014_100039407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1968	Open in IMG/M
3300009522\|Ga0116218_1339174	Not Available	672	Open in IMG/M
3300009524\|Ga0116225_1280837	Not Available	745	Open in IMG/M
3300009698\|Ga0116216_10307627	Not Available	965	Open in IMG/M
3300010339\|Ga0074046_10100421	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Lloydbacteria → Candidatus Lloydbacteria bacterium RIFCSPLOWO2_01_FULL_50_20	1868	Open in IMG/M
3300010339\|Ga0074046_10255639	Not Available	1086	Open in IMG/M
3300010366\|Ga0126379_13673854	Not Available	514	Open in IMG/M
3300010379\|Ga0136449_101091460	Not Available	1271	Open in IMG/M
3300010379\|Ga0136449_101823308	Not Available	909	Open in IMG/M
3300015371\|Ga0132258_10683345	All Organisms → cellular organisms → Bacteria	2583	Open in IMG/M
3300015371\|Ga0132258_11013124	Not Available	2099	Open in IMG/M
3300015371\|Ga0132258_11160979	All Organisms → cellular organisms → Bacteria	1952	Open in IMG/M
3300015371\|Ga0132258_11347126	Not Available	1803	Open in IMG/M
3300015371\|Ga0132258_12577608	Not Available	1271	Open in IMG/M
3300015371\|Ga0132258_12595544	Not Available	1266	Open in IMG/M
3300015372\|Ga0132256_103052331	Not Available	563	Open in IMG/M
3300015374\|Ga0132255_100785723	Not Available	1418	Open in IMG/M
3300016270\|Ga0182036_10951030	Not Available	706	Open in IMG/M
3300016270\|Ga0182036_11089413	Not Available	661	Open in IMG/M
3300016294\|Ga0182041_10592106	Not Available	973	Open in IMG/M
3300016371\|Ga0182034_10927960	Not Available	750	Open in IMG/M
3300016387\|Ga0182040_10477587	Not Available	992	Open in IMG/M
3300016387\|Ga0182040_11436369	Not Available	585	Open in IMG/M
3300016387\|Ga0182040_11480809	Not Available	576	Open in IMG/M
3300016404\|Ga0182037_10821966	Not Available	802	Open in IMG/M
3300016445\|Ga0182038_11476774	Not Available	610	Open in IMG/M
3300017939\|Ga0187775_10018398	All Organisms → cellular organisms → Bacteria	1882	Open in IMG/M
3300017939\|Ga0187775_10396859	Not Available	569	Open in IMG/M
3300017939\|Ga0187775_10483192	Not Available	527	Open in IMG/M
3300017939\|Ga0187775_10533747	Not Available	504	Open in IMG/M
3300017944\|Ga0187786_10444809	Not Available	574	Open in IMG/M
3300017959\|Ga0187779_10716344	Not Available	678	Open in IMG/M
3300017959\|Ga0187779_10816692	Not Available	637	Open in IMG/M
3300017961\|Ga0187778_10856978	Not Available	622	Open in IMG/M
3300017961\|Ga0187778_11333884	Not Available	506	Open in IMG/M
3300017966\|Ga0187776_10268664	All Organisms → cellular organisms → Bacteria	1097	Open in IMG/M
3300017966\|Ga0187776_11062884	Not Available	599	Open in IMG/M
3300017966\|Ga0187776_11066366	Not Available	598	Open in IMG/M
3300017966\|Ga0187776_11140359	Not Available	581	Open in IMG/M
3300017966\|Ga0187776_11342468	Not Available	542	Open in IMG/M
3300017972\|Ga0187781_10116888	Not Available	1858	Open in IMG/M
3300017972\|Ga0187781_10170343	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1533	Open in IMG/M
3300017972\|Ga0187781_10473840	Not Available	897	Open in IMG/M
3300017973\|Ga0187780_11143881	Not Available	570	Open in IMG/M
3300017973\|Ga0187780_11228309	Not Available	550	Open in IMG/M
3300017973\|Ga0187780_11237879	Not Available	547	Open in IMG/M
3300017974\|Ga0187777_10250213	Not Available	1203	Open in IMG/M
3300017974\|Ga0187777_10298538	Not Available	1100	Open in IMG/M
3300017974\|Ga0187777_10661322	Not Available	739	Open in IMG/M
3300017975\|Ga0187782_10121479	Not Available	1932	Open in IMG/M
3300017975\|Ga0187782_10241148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1357	Open in IMG/M
3300017975\|Ga0187782_10286411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1242	Open in IMG/M
3300017975\|Ga0187782_10373892	Not Available	1081	Open in IMG/M
3300017975\|Ga0187782_10762624	Not Available	747	Open in IMG/M
3300017975\|Ga0187782_10808603	Not Available	725	Open in IMG/M
3300018029\|Ga0187787_10028476	Not Available	1545	Open in IMG/M
3300018029\|Ga0187787_10307536	Not Available	597	Open in IMG/M
3300018032\|Ga0187788_10088360	Not Available	1106	Open in IMG/M
3300018058\|Ga0187766_10666439	Not Available	716	Open in IMG/M
3300018058\|Ga0187766_10817839	Not Available	652	Open in IMG/M
3300018058\|Ga0187766_10991967	Not Available	597	Open in IMG/M
3300018062\|Ga0187784_10282975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1347	Open in IMG/M
3300018062\|Ga0187784_10970805	Not Available	676	Open in IMG/M
3300018064\|Ga0187773_10083320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1543	Open in IMG/M
3300018064\|Ga0187773_10084301	Not Available	1535	Open in IMG/M
3300018064\|Ga0187773_10366847	Not Available	824	Open in IMG/M
3300018064\|Ga0187773_10391749	Not Available	802	Open in IMG/M
3300018064\|Ga0187773_10698188	Not Available	633	Open in IMG/M
3300018064\|Ga0187773_10986266	Not Available	551	Open in IMG/M
3300018085\|Ga0187772_10257117	Not Available	1188	Open in IMG/M
3300018085\|Ga0187772_10707014	Not Available	723	Open in IMG/M
3300018085\|Ga0187772_10741733	Not Available	706	Open in IMG/M
3300018086\|Ga0187769_10363017	Not Available	1087	Open in IMG/M
3300018086\|Ga0187769_10485916	Not Available	931	Open in IMG/M
3300018086\|Ga0187769_10493325	Not Available	924	Open in IMG/M
3300018086\|Ga0187769_11013701	Not Available	628	Open in IMG/M
3300018086\|Ga0187769_11160340	Not Available	585	Open in IMG/M
3300018086\|Ga0187769_11169088	Not Available	582	Open in IMG/M
3300018088\|Ga0187771_11393876	Not Available	595	Open in IMG/M
3300018089\|Ga0187774_10341014	Not Available	889	Open in IMG/M
3300018089\|Ga0187774_10618705	Not Available	704	Open in IMG/M
3300018089\|Ga0187774_10704215	Not Available	669	Open in IMG/M
3300018089\|Ga0187774_10828591	Not Available	628	Open in IMG/M
3300018089\|Ga0187774_11110266	Not Available	560	Open in IMG/M
3300018089\|Ga0187774_11381691	Not Available	515	Open in IMG/M
3300018090\|Ga0187770_10218775	All Organisms → cellular organisms → Bacteria → Proteobacteria	1470	Open in IMG/M
3300018090\|Ga0187770_11605049	Not Available	531	Open in IMG/M
3300027604\|Ga0208324_1219448	Not Available	500	Open in IMG/M
3300027896\|Ga0209777_10328169	Not Available	1173	Open in IMG/M
3300027896\|Ga0209777_10485537	Not Available	913	Open in IMG/M
3300027898\|Ga0209067_10683431	Not Available	594	Open in IMG/M
3300027902\|Ga0209048_10163692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1648	Open in IMG/M
3300027902\|Ga0209048_10421491	All Organisms → cellular organisms → Bacteria	913	Open in IMG/M
3300027902\|Ga0209048_10768368	Not Available	630	Open in IMG/M
3300031719\|Ga0306917_11196333	Not Available	590	Open in IMG/M
3300031744\|Ga0306918_11518285	Not Available	512	Open in IMG/M
3300031910\|Ga0306923_12409585	Not Available	522	Open in IMG/M
3300031947\|Ga0310909_10505044	Not Available	1014	Open in IMG/M
3300031954\|Ga0306926_12417512	Not Available	579	Open in IMG/M
3300031954\|Ga0306926_12988497	Not Available	505	Open in IMG/M
3300032160\|Ga0311301_10112518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5206	Open in IMG/M
3300032160\|Ga0311301_10839385	Not Available	1252	Open in IMG/M
3300032160\|Ga0311301_11901737	Not Available	701	Open in IMG/M
3300032261\|Ga0306920_102539684	Not Available	704	Open in IMG/M
3300032261\|Ga0306920_102723907	Not Available	675	Open in IMG/M
3300032261\|Ga0306920_103503661	Not Available	580	Open in IMG/M
3300032261\|Ga0306920_103839551	Not Available	549	Open in IMG/M
3300033004\|Ga0335084_10897434	Not Available	897	Open in IMG/M
3300033433\|Ga0326726_11438127	Not Available	671	Open in IMG/M
3300033803\|Ga0314862_0144365	Not Available	574	Open in IMG/M
3300033806\|Ga0314865_003885	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3751	Open in IMG/M
3300034090\|Ga0326723_0288238	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Lloydbacteria → Candidatus Lloydbacteria bacterium RIFCSPLOWO2_01_FULL_50_20	736	Open in IMG/M
3300034090\|Ga0326723_0397381	Not Available	626	Open in IMG/M
3300034671\|Ga0314796_187441	Not Available	504	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	93.55%
Host-Associated	Host-Associated	6.45%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.68%
Aquatic	Environmental → Aquatic	8.87%
Plants	Host-Associated → Plants	6.45%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.26%
Freshwater	Environmental → Aquatic → Freshwater	5.65%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.65%
Sediment	Environmental → Aquatic → Sediment	3.23%
Peat	Environmental → Terrestrial → Peat	2.42%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.81%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	54.03%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	28.23%
Lentic	Environmental → Aquatic → Freshwater → Lentic	5.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.23%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.42%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	54.03%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.13%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	8.87%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	5.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.23%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.42%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.42%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	50.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	14.52%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	7.26%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	5.65%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	4.84%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.42%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	2.42%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	1.61%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.61%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Sediment	0.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.81%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573004	Grass soil microbial communities from Rothamsted Park, UK - FG2 (Nitrogen)	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000579	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A01	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003152	Freshwater sediment microbial communities from Loktak Lake, India	Environmental	Open in IMG/M
3300003861	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009698	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017939	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MG	Environmental	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300018089	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033803	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_0_10	Environmental	Open in IMG/M
3300033806	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_50_20	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034671	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FG2_04546420	2189573004	Grass Soil	MGTTKRARKASDDALFVEPSAWAPPYRAWRERAKDTRELAQRASNDNAKKLLLLIAE
INPhiseqgaiiFebDRAFT_1014149952	3300000364	Soil	MRTTKKARKASEDALFVEPSAWVPPYQAWRERAKRTRELAEQATNDHAKRLLLMIAEGYDRLAK*
AP72_2010_repI_A01DRAFT_10717011	3300000579	Forest Soil	MRAIKKAKAFEDPLFVEPSAWVPLYGAWQERAKSTRALAERAANDRAKKLLLI
JGI1027J11758_117936071	3300000789	Soil	MRALKIARKTHEDRLFVEPAGWTPLYGAWQDRAKSTRXLAERATSDHAKKLLLIIADVYD
JGI1027J12803_1057996633	3300000955	Soil	MRAIKKAKAFEDDPLFVEPATWAPLYGAWQERAKSTRALAERAANDRAKKLLLIVADGYDRLAK*
Ga0052254_10450531	3300003152	Sediment	MRAIEKAKAFEDHLFVEPAAWAPLYGAWQERAKSTRALAERAANDGAKKLLLIVADGYDRLAR*
Ga0031654_101336801	3300003861	Freshwater Lake Sediment	MRAIKKAKAFEDPLFVEPTAWAPLYGAWXERAKSTRALAERAANDRAKKLLLIVAEGYDRLAK*
Ga0075029_1013487141	3300006052	Watersheds	MRAIKKAKAFEDPLFVEPTAWAPLYGAWQEQAKNTRELAGRAANDRAKKLLLLVADGYDRLAK*
Ga0075017_1015788241	3300006059	Watersheds	MRAIKKAKAFEDPLFVEPTAWAPLYGAWQEQAKNTRELADRATNDNAKKLLLRIADGYDRLAK*
Ga0075014_1000394071	3300006174	Watersheds	MGTTKRARKASDDALFVEPSAWAPPYRAWRERAKDTRELAQRASNDNAKKLLLLIADGYDRLSK*
Ga0116218_13391741	3300009522	Peatlands Soil	MRAIKKAKAFEDPLFVEPTAWAPLYGAWQERAKSTRALAERAANDRAKKLLLIVADGYDRLAK*
Ga0116225_12808371	3300009524	Peatlands Soil	MRAIKKAKPFEDPLFVEPTAWAPLYGAWQERAKSTRALAERAANDRAKKLLLIVADGYDRLAK*
Ga0116216_103076272	3300009698	Peatlands Soil	MRAIKKAKAFEDPLFVEPTAWAPLYGAWQERAKSTRALAERAANDRAKKLLLTVAEGYDRLAK*
Ga0074046_101004214	3300010339	Bog Forest Soil	AFEDPLFVEPTAWAPLYGAWQERAKSTRALAERAANDRAKKLLLIVAEGYDRLAK*
Ga0074046_102556393	3300010339	Bog Forest Soil	MRAIKKAKAFEDPLFVEPTAWAPLYGAWQERAKSTRALAERAANDRAKKLLLIVAEGYDRLAK*
Ga0126379_136738542	3300010366	Tropical Forest Soil	DRLFVEPAGWAPLYGAWQERAKSTRELAERATNDHAKKLLLMIADVYDRLSK*
Ga0136449_1010914601	3300010379	Peatlands Soil	AFEDPLFVEPTAWAPLYGAWQERAKSTRALAERAANDRAKKLLLIVADGYERLAK*
Ga0136449_1018233081	3300010379	Peatlands Soil	PTAWAPLYGAWQERAKSTRALAERAANDRAKKLLLTVAEGYDRLAK*
Ga0132258_106833452	3300015371	Arabidopsis Rhizosphere	MRTTKRARKASEDALFVEPLAWAPPYQSWRERAKDTRELAQRASNDNAKKLLLLIADGYDLLAK*
Ga0132258_110131242	3300015371	Arabidopsis Rhizosphere	MRAIKQAKAFEDPLFVEPTAWAPLYGAWQEQAKNTRELADRATNDNAKKLLLRIADGYDRLAK*
Ga0132258_111609791	3300015371	Arabidopsis Rhizosphere	KAFEDDPRFVEPTAWAPLYGAWQEQAKNTRELAGRAANDRAKKLLLLVADGYDRLAK*
Ga0132258_113471261	3300015371	Arabidopsis Rhizosphere	MRTTKRARKASEDALFVEPSVWAPPYRAWRERAEDTRELAQRASNDNAKKLLLLIADGYDRLAK*
Ga0132258_125776082	3300015371	Arabidopsis Rhizosphere	VRAIKKAKAFEDHLFVEPTAWAPLYGAWQERAKSTRALAERATNDNAKKLLLRVAEGYDRLAK*
Ga0132258_125955443	3300015371	Arabidopsis Rhizosphere	MRATKKARKASEDALFVEPSAWAPPYQAWRERAKSTRALAERAANDRAKKLLLIVADGYDRLAK*
Ga0132256_1030523311	3300015372	Arabidopsis Rhizosphere	AKAFEDPLFVEPTAWAPLYGAWQEQAKNTRELADRATNDNAKKLLLRIADGYDRLAK*
Ga0132255_1007857232	3300015374	Arabidopsis Rhizosphere	MRAIKKAKAFEDDPLFVEPTAWAPFYGAWQEQAKNTRELAGRAANDRAKKLLLLVADGYDRLAK*
Ga0182036_109510302	3300016270	Soil	MRAIKKAKAFEDHLFVEPAAWTPLYGAWQERAKSTRALAERAANDRAKKLLLIVADGYDRLVK
Ga0182036_110894131	3300016270	Soil	MRAIKKGKAFEDPLFVEPTAWAPLYGAWQEQAKSTRELADLAKDGLAKSLLTQIA
Ga0182041_105921061	3300016294	Soil	RVMRATKKPRKAFEDPLLVEPLAWVPLYGAWQERAKNTRELADRATTDNAKKLLFRIAEGYDRLAK
Ga0182034_109279602	3300016371	Soil	VMRAIKKAKAFEDHLFVEPAAWTPLYGAWQERAKSTRALAERAANDRAKKLLLIVADGYDRLAK
Ga0182040_104775872	3300016387	Soil	MRAIKKSKALEDPLYVESAAWVPLYGAWQERAKSTRALAERAANDRAKKLLLIVAGGYDRLAK
Ga0182040_114363692	3300016387	Soil	MRAIKKAKAFEDPLFVEPTAWAPLYGAWQERAKSTRALAERATNDRAKKLLLIVADGYDRLAK
Ga0182040_114808091	3300016387	Soil	MRAIKKVNAFEDPLLVEPSGWAPLYGAWQERAQNTREVAERATNDNAKKLLL
Ga0182037_108219661	3300016404	Soil	KKAKAFEDPLFVEPSAWVPLYGAWQERANSTRALAERAANDRAKKLLLIVADGYDRLAK
Ga0182038_114767741	3300016445	Soil	MRAIKKAKAFEDHLFVEPAAWTPLYGAWQERAKSTRALAERAANDRAKKLLLIVADGYDR
Ga0187775_100183981	3300017939	Tropical Peatland	VMRAIKKAKAFEDPLFVEPSAWVPLYGAWQERAKSTRALAERAANDRAKKLLLIVADGYDRLAK
Ga0187775_103968592	3300017939	Tropical Peatland	MRVIKKAKAFEDPLFVEPSAWVPLYGAWQERAKSTRALAERAANDRAKKLLLIVADGYDRLAK
Ga0187775_104831921	3300017939	Tropical Peatland	KAKAFEDPLFVEPSAWVPLYGAWQERAKSTRALAERAANDRAKKLLLIVADGYDRLAE
Ga0187775_105337471	3300017939	Tropical Peatland	MGTTKRARKASDDALFVEPSAWAPPYRAWRERAKDTRELAQRASNDNAKKLLFLIADGYD
Ga0187786_104448091	3300017944	Tropical Peatland	MRAIKKAKAFEDPLFVEPSAWVPLYGAWQERAKSTRALAERAANDRAKKLLLIVADGYDRLAK
Ga0187779_107163441	3300017959	Tropical Peatland	FVEPSAWVPLYGAWQERAKHTRALADRAANDRAKKLLLIVADGYDRLAK
Ga0187779_108166921	3300017959	Tropical Peatland	MRAIKNAKAFEDDPLFVEPTAWAPLYGAWQERAKSTRALAERAANDRAKKLLLIVADGYDQLAK
Ga0187778_104931593	3300017961	Tropical Peatland	AVTFVEPAAWAPLYGAWQERAKSTRALAERAANDRAKKLLLMVADGYDRLAK
Ga0187778_108569781	3300017961	Tropical Peatland	MKIPRKAFEEALFVEPSAWAPPYQAWRERAKDTRELAERATNNNAKKLLLMIADSYDRLA
Ga0187778_113338841	3300017961	Tropical Peatland	MRATNKTRNAFEHRLFVEPSAWAPPYQAWQERAKSTRELAERATNDRAKELLLVIADGYDRL
Ga0187776_102686643	3300017966	Tropical Peatland	VRERVMGTTKRARKASDDALFVEPSAWAPPYRAWRERAKDTRELAQRASNDNAKKLLLLIADGYD
Ga0187776_110628841	3300017966	Tropical Peatland	MRPIKKAKAFEDSLFVEPSAWVPLYGAWQERAKHTRALAERAANDRAKKLLLIVADGYDRLAT
Ga0187776_110663661	3300017966	Tropical Peatland	MRATKKPRKAFEDHLFVEPAAWAPLYGAWQERAKHTRALADRATNNTAKKLLLRIAEGYDRLGKYAGLSGTREKF
Ga0187776_111403592	3300017966	Tropical Peatland	MRVLRKVKAFEDALFVEPTTWTPLYGAWQERASITRDLADRVADDTARQLLLMIADGYDRLAE
Ga0187776_113424681	3300017966	Tropical Peatland	FEDPLFVEPSAWVPLYGAWQERARSTHALAERAANDRAKKLLLIVAEGYDRLAK
Ga0187781_101168881	3300017972	Tropical Peatland	MKIPREAFEEALFVEPSAWAPPYQAWRDRAKDTRELAERATSNNAKKLLLMIADSYDRLA
Ga0187781_101703431	3300017972	Tropical Peatland	PAAWVPLYGAWQERAKSTRALAERAANDRAKKLLLIVADGYDRLAK
Ga0187781_104738401	3300017972	Tropical Peatland	MRAIKKAKAFEDHLFVEPAAWAPLYGAWQERAKSTRALAERAANDRAKKLLLIVADGYDRLAK
Ga0187780_111438811	3300017973	Tropical Peatland	MRPIKKAKAFEDSLFVEPSAWVPLYGAWQERAKHTRALAERAANDRAKKLLLLVADGYDRLAK
Ga0187780_112283091	3300017973	Tropical Peatland	MKIPRKAFEALFVEPSAWAPPYQAWRDRAKDTRELAERATSNNAKKLLLMIAESYDRLAK
Ga0187780_112378791	3300017973	Tropical Peatland	MRAIKKAKAFEDHLFVEPTAWAPHYGTWQERAKSTRALAERAANDRAKKLLLIVADGYDRLAK
Ga0187777_102502131	3300017974	Tropical Peatland	MRTTKKAKAIEDPLFVEPSAWAPLYGAWQERAKSTRALAERAANDRAKKLLLIVADGYDRLAR
Ga0187777_102985381	3300017974	Tropical Peatland	MRAIKKAKAFEDPLFVEPLAWAPLYGAWQERAKSTRALAERAANDRAKKLLLIVADGYDRLAR
Ga0187777_106613221	3300017974	Tropical Peatland	MRAIKKAKAFEDPLFVEPSAWVPLYGAWQDRAKSTRALAERAANDRAKKLLLIVADGYDRLAK
Ga0187782_101214793	3300017975	Tropical Peatland	MKIPRKAFEALFVEPSAWAPPYQAWRDRAKDTRELAERATNNNAKKLRLMIAESYDRLAK
Ga0187782_102411482	3300017975	Tropical Peatland	MRATKKPRKAFEDPLLVEPLAWAPLYGAWQERAKSTRELADRATNDNAKKLLLRIAEGYDRLAK
Ga0187782_102864111	3300017975	Tropical Peatland	MRATKKPRKAFEDPLLVEPLAWVPLYGAWQERAKNTRELADRATSDNAKKLLFRIAEGYDRLAK
Ga0187782_103738921	3300017975	Tropical Peatland	MRAIKKAKAFEDLLFVEPAAWAPLYGAWQERAKSTRALAERAANDRAKKLLLIVADGYDRLAK
Ga0187782_107626241	3300017975	Tropical Peatland	MRAIKKAKAFEDPLFVEPLAWAPLYGAWQERAKSTRALAERAANDRAKKLLLIVADGYDRLAK
Ga0187782_108086032	3300017975	Tropical Peatland	MRALKKAKAFEDALFVEPSTWAPLYGAWQERAKSTRALAERAANDRAKKLLLIVADGYDRLAK
Ga0187787_100284761	3300018029	Tropical Peatland	MRAIKKAKAFEDHLFVEPTAWVPLYGAWQERARSTRALAERAANDRAKKLLLIVAEGYDRLAK
Ga0187787_103075361	3300018029	Tropical Peatland	MRTTKKAKAFEDPLFVEPAAWTPLYGGWQERAKSTRALAERAANDRAKKLLLIVADGYDRLAE
Ga0187788_100883601	3300018032	Tropical Peatland	MRAIKKAKAFEDPLFVEPAAWTPLYGAWQERAKSTRALAERAANDRAKKLLLIVADRYDRLAK
Ga0187766_106664391	3300018058	Tropical Peatland	MRALKKARAFEDHLFVEPSAWVPLYGAWQERAKHTRALADRAANDRAKKLLLIVADGYDRLA
Ga0187766_108178391	3300018058	Tropical Peatland	MKIPRKAFEEALFVEPSAWAPPYQAWRDRAKDTRELAERATSNNAKKLLLMIAESYDRLA
Ga0187766_109919671	3300018058	Tropical Peatland	MRALKKAKAFEDPLFVEPTAWAPLYGAWQERAKSTRELAERAANDRAKKLLLIVADGYDRLAK
Ga0187784_102829751	3300018062	Tropical Peatland	MRAIKKAKAFEDRLFVEPAAWAPLYGAWQERAKSTRALAERAANDRAKKLLLIVADGYDRLAK
Ga0187784_109708051	3300018062	Tropical Peatland	MRAIKKAKAFEDHLFVEPTAWAPLYGAWQERAKSTRELAERATSDRAKKLLLIVADGYDRLGK
Ga0187773_100833203	3300018064	Tropical Peatland	MRAIKKAKAFEDHLFVEPTAWAPLYGAWQEQAKNTRELADRATNDTAKKLLLRIAEGYDRLAK
Ga0187773_100843011	3300018064	Tropical Peatland	MRAIKKAKAFEDPLFVESSAWVPLYGAWQERARSTRALAERAANDRAKKLLLIVAEGYDRLAK
Ga0187773_103668472	3300018064	Tropical Peatland	MRAIKKAKAFEDHLFVEPTAWVPLYGAWHERAKHTRALADRAADDRAKKLLL
Ga0187773_103917491	3300018064	Tropical Peatland	MRAIEKAKAFEDTLFVEPTTWTPLYGAWQERAKSTRALAERAANDRAKKLLLIVADGYDRLAK
Ga0187773_106981882	3300018064	Tropical Peatland	MGTTKRARKASDDALFVEPSAWAPPYRAWRERAKDTRELAQRASNDNAKKLLLLIAEGYDRLAK
Ga0187773_109862661	3300018064	Tropical Peatland	MRAPKKARKAHEDRLFVEPGAWAPPYGAWQEQAKSTRELAERATNDHAKKLLLVIADGYDRLAK
Ga0187772_102571172	3300018085	Tropical Peatland	MGAIKKAKAFEDHLFVEPAAWAPLYGAWQERAKSTRALAERAANDRAKKLLLIVADGYDRLAK
Ga0187772_107070141	3300018085	Tropical Peatland	MRAIKKAKAFEDPLFVEPLAWAPLYGAWQERAKSTRALAERAANDRAKKLLLIVADSYDRLAK
Ga0187772_107417331	3300018085	Tropical Peatland	MRAIKKARKAFEDPLFVEPTTWTPLYGAWQERAKNTRELAERAANDRAKKLLLVVADGYDRLAK
Ga0187769_103630171	3300018086	Tropical Peatland	RFEFGKRVMRATKKPRKAFEDPLLVEPLAWAPLYGAWQERAKNTRELADRATNDNAKKLLLRIAEGYD
Ga0187769_104859161	3300018086	Tropical Peatland	MRAIKKAKAFEDPLFVEPLAWAPLYGAWQERAKSTRALAERAANDRAKKLLLIVADGYDRLAE
Ga0187769_104933251	3300018086	Tropical Peatland	MRAMKKAKAFEDPLFVEPSAWVPLYGAWQERAKHTRALADRAANDRAKKLLLL
Ga0187769_110137011	3300018086	Tropical Peatland	MVRATKKTRKAFEDPLLVEPLAWAPLYGAWQERAKSTRELADRATNDNAKKLLLRIAE
Ga0187769_111603402	3300018086	Tropical Peatland	MRAIEKAKAFEDTLFIEPTTWTPLYGAWQERAKSTRALAERAANNRAKKLLLIVADGYDRLAG
Ga0187769_111690881	3300018086	Tropical Peatland	KAFEDPLFVEPTAWAPLYGAWQERAKGTRALAERAANDRAKKLLLIVADGYDRLAE
Ga0187771_113938762	3300018088	Tropical Peatland	MRAIKKAKAFEDPLFVEPTAWAPLYGAWQERAKSTRALAERAANDRAKKLLLIVADGYDRLAK
Ga0187774_103410141	3300018089	Tropical Peatland	MRAIKKAKAFEDSLFVEPATWTPLYGAWQERARSTRALAERAANDRAKKLLLIVADGYDRLAK
Ga0187774_106187051	3300018089	Tropical Peatland	MRAIEKAKAFEDTLFLEPTAWTSLYGAWQERAKSTRALAERAANDRAKKLLLIVADGYDRLAE
Ga0187774_107042152	3300018089	Tropical Peatland	MRAIKKAKAFEDDPLFVEPTAWAPLYGAWQERAKSTRALAERAANDRAKKLLLLVADGYDRLAK
Ga0187774_108285911	3300018089	Tropical Peatland	MRAIKKAKAFEDPLFVEPSAWVPLYGAWQERAESTRALAERAANDRAKKLLLI
Ga0187774_111102661	3300018089	Tropical Peatland	MRASKIARKAHEDRLFGEPGAWAPPYGAWQEQAKSTRELAQRATSDHTRKLLLMIADGY
Ga0187774_113816911	3300018089	Tropical Peatland	MRAIKKAKAFEDPLFVEPAAWTPLYGAWQERAKSTRALAERAANDRAKKLLLIVADGYDRLAK
Ga0187770_102187752	3300018090	Tropical Peatland	MRAIKKAKAFEDHLFVEPAAWAPLYGAWQERAKSTRALAERAANDRAKKLLLIVAEGYDRLAK
Ga0187770_116050491	3300018090	Tropical Peatland	MRAIKKAKAFEDPLFVEPSAWVPLYGAWQERAKHTRALAERAANDRAKKLLL
Ga0208324_12194481	3300027604	Peatlands Soil	MRAIKKAKAFEDPLFVEPTAWAPLYGAWHERAKSTRELAERAANDRAKKLLLIVAEGYDRLAK
Ga0209777_103281691	3300027896	Freshwater Lake Sediment	MRAIKKAKAFEDPLFVEPSAWVPLYGAWQERAKSTRALAQRAGNDRAKKLLLIVAEGYDRLAT
Ga0209777_104855372	3300027896	Freshwater Lake Sediment	MRTTKKARKAFEDPLFVEPSTWAPPYQAWQERAKSTRELAERATNHNAKKLLLIIAEGYDRLVHPR
Ga0209067_106834312	3300027898	Watersheds	MRAIKKAKAFEDPLFVEPTAWAPLYGAWQEQAKNTRELADRATNDNAKKLLLRIADGYDRLAK
Ga0209048_101636922	3300027902	Freshwater Lake Sediment	MRAIKKAKAFEDHLFVEPAAWAPLYGTWQERAKSTRALAERAANDRATKLLLIIADGYDRLAK
Ga0209048_104214911	3300027902	Freshwater Lake Sediment	MRAIKKAKAFEDDPLFVEPTAWAPLYGAWQEQAKNTRELAGRAANDRAKKLLLLVADGYDRLAK
Ga0209048_107683682	3300027902	Freshwater Lake Sediment	MRAIKKAKAFEDPLFVEPTAWAPLYGAWHERAKSTRALAERAANDRAKKLLLIVAEGYDRLAK
Ga0306917_111963332	3300031719	Soil	RVMRAIKKVNAFEDPLFVEPTAWAPLYGAWQERAKSTRALAERAANDRAKKLLLIVADGYDRLAK
Ga0306918_115182851	3300031744	Soil	MRAIKKAKAFEDPLFVEPSAWVPLYGAWQERAKSTRALAERAANDRAKKLLLIVADGYDRLVK
Ga0306923_124095851	3300031910	Soil	MRAIKKAKAFEDPLFVEPLAWAPLYGAWQEQAKSTRALAERAANDRAKKLLLIVADGYDRLAK
Ga0310909_105050441	3300031947	Soil	MRAIKKAKAFEDPLFVEPSAWVPLYGAWQERAKSTRALAERAANDRAKKLLLIVADGYDQLAK
Ga0306926_124175121	3300031954	Soil	MRAIKKAKAFEDHLFVEPTAWAPLYGAWQERAKSTRALAERAANDRAKKLLLIVADGYDRLAK
Ga0306926_129884971	3300031954	Soil	FGKRVMRATKKPRKAFEDPLLVEPLAWAPLYGAWQERAKNTRELADRATNDNAKKLLLRIAEGYDRLAK
Ga0311301_101125185	3300032160	Peatlands Soil	MRAIKKAKAFEDPLFVEPTAWAPLYGAWQERAKSTRALAERAANDRAKKLLLTVAEGYDRLAK
Ga0311301_108393854	3300032160	Peatlands Soil	AFEDPLFVEPTAWAPLYGAWQERAKSTRALAERAANDRAKKLLLIVADGYERLAK
Ga0311301_119017372	3300032160	Peatlands Soil	MRAIKKAKAFEDPLLVEPLAWAPLYGAWQERAKNTRELADRATNDNAKKLLLRIAEGYDRLAK
Ga0306920_1025396841	3300032261	Soil	MRAIKKAKAFEDHLFVEPAAWTPLYGAWQERAKSTRALAERATNDRAKKLLLIVADGYDRLAK
Ga0306920_1027239072	3300032261	Soil	MRALKIARKTHEDRLFVEPAVWAPLYGAWQERAKSTRELAEHATNDHAKKLLLMIADVYDRLSK
Ga0306920_1035036612	3300032261	Soil	KAKAFEDPLFVEPSAWVPLYGAWQERAKSTRALAERAANDRAKKLLLIVADGYDRLAK
Ga0306920_1038395511	3300032261	Soil	MRAIKKAKAFEDPLFVEPSAWVPLYGAWQERAKSTRALAERAANDRAKKLLLIVADGY
Ga0335084_108974342	3300033004	Soil	MRAIKKAKAFEDPLFVEPSAWVPLYGAWQERAKSTRALAERAVNDRAKKLLLIVADGYDQLAK
Ga0326726_114381272	3300033433	Peat Soil	MRAIKKAKVFEDHLFVEPTAWVPLYGAWQERAKSTRALAERAANDRAKKLLLIVAEGYDRLAK
Ga0314862_0144365_182_376	3300033803	Peatland	MRTIKITRKAFEDPLLVEPSAWAPPYQAWKERAKSTRELAERATNKSAKKLLLIIAESYDRLAS
Ga0314865_003885_1633_1824	3300033806	Peatland	MRVIKKAKAFEDHLFVEPTAWAPHYGTWQERAKSTRALAERAANDRAKKLLLIVADGYDRLAE
Ga0326723_0288238_102_293	3300034090	Peat Soil	MRAIKKAKAFEDHLFVEPTAWVPLYGAWQERAKSTRALAERAANDRAKKLLLIVAEGYDRLAK
Ga0326723_0397381_193_384	3300034090	Peat Soil	MRAIKKAKAFEDPLFVEPTAWAPLYGAWQERAKSTRALAERAANDRAKKLLLIVAEGYDRLAK
Ga0314796_187441_3_185	3300034671	Soil	DPLFVEALAWAPPYQTWQERAKSTRALAERAANDRAKKLLLIVADGYDRLAKLAEPLREW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069204

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences