Metagenome / Metatranscriptome Family F069188

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F069188
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	43 residues
Representative Sequence	INTAVGNEPVIQTILDTMRLVEGRPKATDYESPKVPASSR
Number of Associated Samples	107
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	94.35 %
% of genes from short scaffolds (< 2000 bps)	87.10 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (81.452 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (16.936 % of family members)
Environment Ontology (ENVO)	Unclassified (25.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (58.871 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 20.59% β-sheet: 0.00% Coil/Unstructured: 79.41%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF00762	Ferrochelatase	78.23
PF00072	Response_reg	0.81
PF14060	DUF4252	0.81
PF00076	RRM_1	0.81
PF00196	GerE	0.81
PF00588	SpoU_methylase	0.81
PF14720	NiFe_hyd_SSU_C	0.81
PF13643	DUF4145	0.81
PF10609	ParA	0.81
PF02129	Peptidase_S15	0.81
PF05977	MFS_3	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG0276	Protoheme ferro-lyase (ferrochelatase)	Coenzyme transport and metabolism [H]	78.23
COG0219	tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain	Translation, ribosomal structure and biogenesis [J]	0.81
COG0565	tRNA C32,U32 (ribose-2'-O)-methylase TrmJ or a related methyltransferase	Translation, ribosomal structure and biogenesis [J]	0.81
COG0566	tRNA G18 (ribose-2'-O)-methylase SpoU	Translation, ribosomal structure and biogenesis [J]	0.81
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	81.45 %
Unclassified	root	N/A	18.55 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	81.45 %
Unclassified	root	N/A	18.55 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	81.45 %
Unclassified	root	N/A	18.55 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	62.10 %
Unclassified	root	N/A	18.55 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	3.23 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.81 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	58.06 %
Unclassified	root	N/A	18.55 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	3.23 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2.42 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	48.39 %
Unclassified	root	N/A	18.55 %
Acidobacteria bacterium 13_1_20CM_4_56_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	9.68 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	2.42 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	2.42 %
unclassified Planctomycetota	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota	0.81 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	48.39 %
Unclassified	root	N/A	18.55 %
Acidobacteria bacterium 13_1_20CM_4_56_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	9.68 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2.42 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	2.42 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.81 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	48.39 %
Unclassified	root	N/A	18.55 %
Acidobacteria bacterium 13_1_20CM_4_56_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	9.68 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	2.42 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.81 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.81 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	48.39 %
Unclassified	root	N/A	18.55 %
Acidobacteria bacterium 13_1_20CM_4_56_7	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	9.68 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	2.42 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.81 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.81 %
Planctomycetota bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001356\|JGI12269J14319_10124075	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1182	Open in IMG/M
3300001593\|JGI12635J15846_10207859	All Organisms → cellular organisms → Bacteria	1288	Open in IMG/M
3300002245\|JGIcombinedJ26739_100945881	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	745	Open in IMG/M
3300002245\|JGIcombinedJ26739_100947304	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	744	Open in IMG/M
3300002245\|JGIcombinedJ26739_101041557	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	704	Open in IMG/M
3300004152\|Ga0062386_100848939	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	753	Open in IMG/M
3300004635\|Ga0062388_101433228	All Organisms → cellular organisms → Bacteria	695	Open in IMG/M
3300005541\|Ga0070733_11045634	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300005542\|Ga0070732_10426750	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	801	Open in IMG/M
3300005542\|Ga0070732_10878322	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300005764\|Ga0066903_109135954	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300005888\|Ga0075289_1015033	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1068	Open in IMG/M
3300005921\|Ga0070766_10041817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2544	Open in IMG/M
3300005952\|Ga0080026_10063915	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	983	Open in IMG/M
3300006052\|Ga0075029_100455796	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	839	Open in IMG/M
3300006162\|Ga0075030_100264032	Not Available	1379	Open in IMG/M
3300006162\|Ga0075030_101406437	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300006174\|Ga0075014_100527040	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	665	Open in IMG/M
3300006358\|Ga0068871_100495378	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	1101	Open in IMG/M
3300006800\|Ga0066660_11567753	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	521	Open in IMG/M
3300006893\|Ga0073928_10055455	All Organisms → cellular organisms → Bacteria	3538	Open in IMG/M
3300006893\|Ga0073928_11221380	Not Available	506	Open in IMG/M
3300006903\|Ga0075426_10816143	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	702	Open in IMG/M
3300009029\|Ga0066793_10528675	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	673	Open in IMG/M
3300009038\|Ga0099829_10023577	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4271	Open in IMG/M
3300009038\|Ga0099829_10388152	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1153	Open in IMG/M
3300009523\|Ga0116221_1487625	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	539	Open in IMG/M
3300009545\|Ga0105237_10380824	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	1416	Open in IMG/M
3300009639\|Ga0116122_1251635	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	547	Open in IMG/M
3300009672\|Ga0116215_1160681	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	996	Open in IMG/M
3300009683\|Ga0116224_10015535	Not Available	3772	Open in IMG/M
3300009762\|Ga0116130_1087466	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	978	Open in IMG/M
3300009839\|Ga0116223_10520093	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	691	Open in IMG/M
3300010048\|Ga0126373_12580016	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300010159\|Ga0099796_10168316	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	873	Open in IMG/M
3300010379\|Ga0136449_100906343	All Organisms → cellular organisms → Bacteria	1436	Open in IMG/M
3300010401\|Ga0134121_12447039	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	563	Open in IMG/M
3300011120\|Ga0150983_13551746	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	565	Open in IMG/M
3300011271\|Ga0137393_10789460	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	812	Open in IMG/M
3300012357\|Ga0137384_10079233	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2729	Open in IMG/M
3300012362\|Ga0137361_10308790	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1448	Open in IMG/M
3300012362\|Ga0137361_11257320	All Organisms → cellular organisms → Bacteria → Acidobacteria	664	Open in IMG/M
3300012927\|Ga0137416_12103223	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300012971\|Ga0126369_11641748	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	732	Open in IMG/M
3300014159\|Ga0181530_10185526	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1156	Open in IMG/M
3300014160\|Ga0181517_10526030	Not Available	596	Open in IMG/M
3300014201\|Ga0181537_10127446	All Organisms → cellular organisms → Bacteria	1741	Open in IMG/M
3300015262\|Ga0182007_10211442	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300017822\|Ga0187802_10031198	All Organisms → cellular organisms → Bacteria	1891	Open in IMG/M
3300017943\|Ga0187819_10827119	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300017948\|Ga0187847_10467826	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300017955\|Ga0187817_10110920	All Organisms → cellular organisms → Bacteria	1731	Open in IMG/M
3300017972\|Ga0187781_10489383	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	882	Open in IMG/M
3300017995\|Ga0187816_10155583	Not Available	990	Open in IMG/M
3300018006\|Ga0187804_10265957	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	742	Open in IMG/M
3300018007\|Ga0187805_10312556	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	723	Open in IMG/M
3300018037\|Ga0187883_10310323	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	806	Open in IMG/M
3300018062\|Ga0187784_10485011	Not Available	997	Open in IMG/M
3300018085\|Ga0187772_10297559	Not Available	1105	Open in IMG/M
3300018090\|Ga0187770_10252558	All Organisms → cellular organisms → Bacteria	1366	Open in IMG/M
3300018090\|Ga0187770_10501353	Not Available	960	Open in IMG/M
3300018090\|Ga0187770_11064669	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	652	Open in IMG/M
3300019278\|Ga0187800_1535550	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	772	Open in IMG/M
3300019786\|Ga0182025_1176765	All Organisms → cellular organisms → Bacteria	1885	Open in IMG/M
3300019786\|Ga0182025_1192969	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	2186	Open in IMG/M
3300020579\|Ga0210407_11146875	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	587	Open in IMG/M
3300020583\|Ga0210401_10425545	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	1190	Open in IMG/M
3300021181\|Ga0210388_10183448	All Organisms → cellular organisms → Bacteria	1827	Open in IMG/M
3300021401\|Ga0210393_11142776	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	628	Open in IMG/M
3300021404\|Ga0210389_10150429	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1805	Open in IMG/M
3300021405\|Ga0210387_11528311	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300021420\|Ga0210394_10091533	All Organisms → cellular organisms → Bacteria	2629	Open in IMG/M
3300021420\|Ga0210394_10136727	Not Available	2126	Open in IMG/M
3300021420\|Ga0210394_10295032	Not Available	1422	Open in IMG/M
3300021420\|Ga0210394_11746333	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300021432\|Ga0210384_11268600	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300021433\|Ga0210391_10509464	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	945	Open in IMG/M
3300021474\|Ga0210390_10098590	All Organisms → cellular organisms → Bacteria	2438	Open in IMG/M
3300021477\|Ga0210398_10417495	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	1094	Open in IMG/M
3300021479\|Ga0210410_10559612	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	1018	Open in IMG/M
3300021861\|Ga0213853_11485358	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	675	Open in IMG/M
3300022532\|Ga0242655_10040348	Not Available	1110	Open in IMG/M
3300022557\|Ga0212123_10026208	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	6230	Open in IMG/M
3300022724\|Ga0242665_10069416	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	983	Open in IMG/M
3300022724\|Ga0242665_10111147	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	825	Open in IMG/M
3300022724\|Ga0242665_10128736	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	780	Open in IMG/M
3300025929\|Ga0207664_10203652	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1709	Open in IMG/M
3300026551\|Ga0209648_10267305	Not Available	1253	Open in IMG/M
3300027505\|Ga0209218_1036862	Not Available	965	Open in IMG/M
3300027545\|Ga0209008_1005595	All Organisms → cellular organisms → Bacteria	2987	Open in IMG/M
3300027567\|Ga0209115_1089356	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	700	Open in IMG/M
3300027676\|Ga0209333_1098703	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	796	Open in IMG/M
3300027767\|Ga0209655_10306945	Not Available	511	Open in IMG/M
3300027812\|Ga0209656_10262435	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	812	Open in IMG/M
3300027842\|Ga0209580_10091661	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → unclassified Planctomycetota → Planctomycetota bacterium	1462	Open in IMG/M
3300027853\|Ga0209274_10351296	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	760	Open in IMG/M
3300027867\|Ga0209167_10668266	Not Available	568	Open in IMG/M
3300027884\|Ga0209275_10927462	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	502	Open in IMG/M
3300027986\|Ga0209168_10333697	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	742	Open in IMG/M
3300028536\|Ga0137415_10171544	Not Available	1999	Open in IMG/M
3300028775\|Ga0302231_10228936	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	777	Open in IMG/M
3300028776\|Ga0302303_10131019	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	898	Open in IMG/M
3300028800\|Ga0265338_10672585	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	716	Open in IMG/M
3300028906\|Ga0308309_11582200	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	558	Open in IMG/M
3300028906\|Ga0308309_11658558	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300029636\|Ga0222749_10030314	All Organisms → cellular organisms → Bacteria	2294	Open in IMG/M
3300029915\|Ga0311358_11204346	Not Available	503	Open in IMG/M
3300030053\|Ga0302177_10610490	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_4_56_7	557	Open in IMG/M
3300030617\|Ga0311356_10427089	Not Available	1304	Open in IMG/M
3300030617\|Ga0311356_11214502	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	693	Open in IMG/M
3300030746\|Ga0302312_10059096	All Organisms → cellular organisms → Bacteria	1668	Open in IMG/M
3300030847\|Ga0075405_10807787	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300031258\|Ga0302318_10518019	Not Available	604	Open in IMG/M
3300031525\|Ga0302326_11217192	Not Available	1034	Open in IMG/M
3300031715\|Ga0307476_10108790	All Organisms → cellular organisms → Bacteria → Acidobacteria	1963	Open in IMG/M
3300031718\|Ga0307474_10537695	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	918	Open in IMG/M
3300031962\|Ga0307479_10058539	All Organisms → cellular organisms → Bacteria	3713	Open in IMG/M
3300032180\|Ga0307471_100349406	Not Available	1588	Open in IMG/M
3300032205\|Ga0307472_101589212	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642	Open in IMG/M
3300032782\|Ga0335082_10027332	All Organisms → cellular organisms → Bacteria	6079	Open in IMG/M
3300033828\|Ga0334850_004515	All Organisms → cellular organisms → Bacteria	2926	Open in IMG/M
3300034163\|Ga0370515_0175079	Not Available	917	Open in IMG/M
3300034199\|Ga0370514_061766	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	945	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.97%
Host-Associated	Host-Associated	4.03%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.81%
Aquatic	Environmental → Aquatic	20.16%
Plants	Host-Associated → Plants	4.03%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.74%
Freshwater	Environmental → Aquatic → Freshwater	14.52%
Peat	Environmental → Terrestrial → Peat	8.06%
Sediment	Environmental → Aquatic → Sediment	3.23%
Rhizosphere	Host-Associated → Plants → Rhizosphere	3.23%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.42%
Roots	Host-Associated → Plants → Roots	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.74%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	13.71%
Loam	Environmental → Terrestrial → Soil → Loam	12.90%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	12.10%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.06%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.23%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.42%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.81%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.81%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.81%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.97%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.16%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	12.10%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	8.87%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.06%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	7.26%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.23%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	3.23%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.42%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.61%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.61%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.81%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	16.94%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.26%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	7.26%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	5.65%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	5.65%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.84%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.84%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.84%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.03%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.03%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	3.23%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.23%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.42%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.42%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.61%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.61%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.61%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	1.61%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	1.61%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	0.81%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.81%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.81%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.81%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.81%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.81%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.81%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001356	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004635	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005888	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_103	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300005952	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-045	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009639	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40	Environmental	Open in IMG/M
3300009672	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_2_FS metaG	Environmental	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014160	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaG	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300015262	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG	Host-Associated	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019278	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022532	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300022724	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300027505	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027676	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_O3 (SPAdes)	Environmental	Open in IMG/M
3300027767	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP03_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028775	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_2	Environmental	Open in IMG/M
3300028776	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E2_1	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029915	III_Bog_E1 coassembly	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030617	II_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030746	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N2_1	Environmental	Open in IMG/M
3300030847	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA10 SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031258	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_1	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300033828	Peat soil microbial communities from Stordalen Mire, Sweden - 715 P1 1-5	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M
3300034199	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_01D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12269J14319_101240752	3300001356	Peatlands Soil	AVGNESVIQTILSTMRTVEGSPKATNYEAPRIPTPSR*
JGI12635J15846_102078592	3300001593	Forest Soil	ADWPTRSLYHVMLNTAVGNEPVIQTILDTMRRVQGHPKATEYENQNVPALQR*
JGIcombinedJ26739_1009458811	3300002245	Forest Soil	MLNTAVGNEPVISTILTTMHLVEGRPKATDYEPTRIPATP*
JGIcombinedJ26739_1009473041	3300002245	Forest Soil	MLNTAVGNEPVISTILTTMHLVEGRPKATDYEPTHIPATP*
JGIcombinedJ26739_1010415572	3300002245	Forest Soil	VGNESVIETILHTMRLDEGRPKATSYEPPKVSNAV*
Ga0062386_1008489392	3300004152	Bog Forest Soil	RSLYHVMINTAVGNEAVIQTILHTMHLVEGSPKATDYERLKVPSPL*
Ga0062388_1014332282	3300004635	Bog Forest Soil	WPTRSLYHMMLNTAVGNEAVIRTILSTMSTVEGHPKATEFSGSTVPVASR*
Ga0070733_110456341	3300005541	Surface Soil	NTAVGDKAVVQTILDTMRLVEGRPRATNYDQTKVPVPQV*
Ga0070732_104267501	3300005542	Surface Soil	RSLYHMMINTAVGNDHVVRTILDTMHLVEGSPKATDYENPNPQPVRG*
Ga0070732_108783221	3300005542	Surface Soil	TRSLYHIMINTAVGNERVIAAILSTMRLVEGRPMATDYESPKARTAT*
Ga0066903_1091359542	3300005764	Tropical Forest Soil	VMLNTAVGNEPVINTILETMHLVAGSPKATDYEGPDKAVASHHQKN*
Ga0075289_10150331	3300005888	Rice Paddy Soil	WPTRSLYHMMLKTAVGKEPVVKTILETMHLVEGRPKATGYEQPSAQTVPR*
Ga0070766_100418175	3300005921	Soil	MINTAVGNEAVIETILHTMHRVEGRPKATDYEAAKVPSSV*
Ga0080026_100639151	3300005952	Permafrost Soil	PTRSLYHVMLNTAVGNDPVVQTILDTMHLVEGRPKATDYEHANVPVSHG*
Ga0075029_1004557961	3300006052	Watersheds	TRSLYHMMMNTAVGNEPVINTILDTMHQVAGGPKATDYERPQTPTAHSSN*
Ga0075030_1002640321	3300006162	Watersheds	PTRSLYHMMLNTAVGNEAVIQTVLSTMRAVEGMPKATDYEAPKTPASTR*
Ga0075030_1014064372	3300006162	Watersheds	PTRSLYHMMLNTAVGNEAVIQTVLSTMRAVEGMPKATDYESPKTPASTR*
Ga0075014_1005270402	3300006174	Watersheds	LYHLMINTAVGNELVIQTILSTMRAVEGSPRATDYEVPKAPVLLR*
Ga0068871_1004953781	3300006358	Miscanthus Rhizosphere	YHVMLNTAVGNEPVIQTILDTMRLVEGRPKATDYEHPKVPASSQ*
Ga0066660_115677532	3300006800	Soil	SLYHLMLNTAVGDEPVIQTILNTMRLVEGRPKATDYETPNVRTEV*
Ga0073928_100554551	3300006893	Iron-Sulfur Acid Spring	MINTAVGNESVIQTILHTMHLIEGYPKVTDYDPQKVSTAI*
Ga0073928_112213802	3300006893	Iron-Sulfur Acid Spring	VGDEPVIQTILDTMRRVQGHPRATEYENPNVPASQ*
Ga0075426_108161432	3300006903	Populus Rhizosphere	PTRSLYHMMINTAVGNEPVVKTILHTMHLVEGSPKATDYENPNPQPVRG*
Ga0066793_105286752	3300009029	Prmafrost Soil	VMLNTAVGNEPVIQTILDTMRSVEGRPKATDYENPNVSASSR*
Ga0099829_100235778	3300009038	Vadose Zone Soil	DWPTRSLYHIMLNTAVGDQPVIDTIFETMHRVENRPKATGYEAPIVFSQQR*
Ga0099829_103881521	3300009038	Vadose Zone Soil	TAVGNEPVIETILNTMHLVEGRPKATDYERLKVPSSV*
Ga0116221_14876252	3300009523	Peatlands Soil	VGNESVIETILNTMRMVEGRPKATDYERPKVPSSV*
Ga0105237_103808241	3300009545	Corn Rhizosphere	ADWPTRSLYHIMLNTAVGNEPVVQTILETMHRAAGRPKATDYENSKPHTVPH*
Ga0116122_12516351	3300009639	Peatland	NSDWPTRSLYHLMLNTAVGNEPVIQTILSTMRTVEGSPKATEYEAPRIPTPSR*
Ga0116215_11606811	3300009672	Peatlands Soil	WPTRSLYHMMLNTAVGDDAVIRTILDTMCCIEGRPMATGYETPRVPSTR*
Ga0116224_100155355	3300009683	Peatlands Soil	SLYHMMLNTAVGDDAVIRTILDTMCCIEGRPMATGYETPRVPSTR*
Ga0116130_10874662	3300009762	Peatland	YHVMINTAIGNEAVIQTILDTMHLVEGRPKATDYDPQKVASSV*
Ga0116223_105200931	3300009839	Peatlands Soil	GNEPVVQTILDTMHLVEGRPKATDYERPSVPATPR*
Ga0126373_125800161	3300010048	Tropical Forest Soil	SLYHVMLNTAVGNEPVINTILETMHLVAGSPKATDYESPSTPVASHHGKN*
Ga0099796_101683161	3300010159	Vadose Zone Soil	TAVGDEPVIQTILNTMHLVEGRPKATDYEVPVVPANR*
Ga0136449_1009063431	3300010379	Peatlands Soil	AVGNEPVVQTILETMRLVEGSPKATDYERPSVPATSR*
Ga0134121_124470391	3300010401	Terrestrial Soil	MLNTAVGNEPVIQTILDTMHLVEGRPKATDYEYPKVPTATQ*
Ga0150983_135517462	3300011120	Forest Soil	MNTAVGNEPVINTILDTMHQVAGSPKATDYERPKTPTAHTSN*
Ga0137393_107894602	3300011271	Vadose Zone Soil	YHLMLNTAVGDEPVIQTILNTMHLVEGRPKATDYERPPVPANR*
Ga0137384_100792334	3300012357	Vadose Zone Soil	NEPVIQTILDTMRLVEGRPKATDYEHSKVPASPR*
Ga0137361_103087901	3300012362	Vadose Zone Soil	TRSLYHVMINTAVGNEAVIETILHTLHLVEGRPKATDYEHPKVPTSV*
Ga0137361_112573201	3300012362	Vadose Zone Soil	DWPTRSLYHIMLNTAVGDGPVIDTILETMRRVEHHPKATGYEAPSELHQG*
Ga0137416_121032232	3300012927	Vadose Zone Soil	LYHLMLNTAVGDEPVIQTILSTMHLVEGRPKATDYESPVVPAHR*
Ga0126369_116417481	3300012971	Tropical Forest Soil	TAVGNEPVINTILETMHLVAGSPKATDYEGPNRPVASHN*
Ga0181530_101855261	3300014159	Bog	TAVGNEPVIQTILSTMRTVEGSPKATNYEAPRIPTPSR*
Ga0181517_105260301	3300014160	Bog	HVMINTAIGNEAVIQTILDTMHLVEGRPKATDYDPQKVASSV*
Ga0181537_101274461	3300014201	Bog	NTAVGNEPVISTILTTMHLVEGRPKATDYEPTRIPATP*
Ga0182007_102114422	3300015262	Rhizosphere	SLYHMMLNTAVGNEPVIKTILETMHLVEGRPKATGYEQPSAQTVPR*
Ga0187802_100311981	3300017822	Freshwater Sediment	TAVGNELVIETILSTMHAVEGGPKATDYEAPKAPVLVR
Ga0187819_108271191	3300017943	Freshwater Sediment	DWPTRSLYHIMVNTAVGNEAALATILGTMRLVEGRPKATDYEEPRVPSNL
Ga0187847_104678261	3300017948	Peatland	MLNTAMGDEQVIDTILNTMRLTKGRPKATDYEEPKVTA
Ga0187817_101109201	3300017955	Freshwater Sediment	RSLYHLMINTAVGNELVIETILSTMHAVEGGPKATDYEAPKAPVLVR
Ga0187781_104893831	3300017972	Tropical Peatland	SLYHLMINTAMGNEAVLQTILSTMKLVEGRPKATDFEAPATPAAAR
Ga0187816_101555831	3300017995	Freshwater Sediment	YHMMLNTAVGDEPIVKAILDTMRLVEGKPKATDYEKPAQQTISH
Ga0187804_102659572	3300018006	Freshwater Sediment	AVGNELVIETILSTMHAVEGGPKATDYEAPKAPVLVR
Ga0187805_103125561	3300018007	Freshwater Sediment	HYFNADWPTRSLYHLMLNTAARNEAVIKTILETMNLVSGSPKATDYEQSPAPAPSRY
Ga0187883_103103231	3300018037	Peatland	LNTAVGNEPVVQTILDTMHLVEGRPKATDYERPSVPASQL
Ga0187784_104850111	3300018062	Tropical Peatland	SLYHVMLNTAVGNKAVIQTILSTMRTVEGSPKATDYEPAKNSVSSR
Ga0187772_102975591	3300018085	Tropical Peatland	TRSLYHVMLNTAIGNEAVIKTIVDTMHLIEGRPKATDYEPQNAPAAQR
Ga0187770_102525581	3300018090	Tropical Peatland	TAVGNEAVIETILTTKRLLEGSPKATDYEATKAPIPAR
Ga0187770_105013531	3300018090	Tropical Peatland	LYHLMLNTAVGNEAVIRTILKTMRTVEGGPKATDYEAPKISASSG
Ga0187770_110646692	3300018090	Tropical Peatland	LYHVMINTAVGNEPVIETILNTMHLVEGRPKATDYEAPRVSTPI
Ga0187800_15355502	3300019278	Peatland	VNTAVGNEAVIQTILNTMRVVAGSPKATDYEAPRMPTPVR
Ga0182025_11767652	3300019786	Permafrost	MINTAVGNEAVIQTILNTMHLVEGSPKATDYEHPKVPSSV
Ga0182025_11929692	3300019786	Permafrost	MINTASEMKRVIQTILYTTHLIEGRPKATDYDPQKVTTSI
Ga0210407_111468752	3300020579	Soil	PTRSLYHVMINTAVGNESVIQTILHTMHLIEGHPKATDYDPQKVSAAI
Ga0210401_104255451	3300020583	Soil	SLYHMMMNTAVGNEPVIQAILHTMHLVEGRPKATDYDSSRVPTPI
Ga0210388_101834481	3300021181	Soil	RSLYHVMINTAVGNESVVETILNTMRMVEGRPKATAYEPPKVPSSV
Ga0210393_111427762	3300021401	Soil	TAVGNAPVIQTILDTMHLTEGRPKATDYEPASVPLISN
Ga0210389_101504293	3300021404	Soil	HVMISTALGNEAVIETILQTMRLVQDHPRVTDYEPPKVSNVI
Ga0210387_115283112	3300021405	Soil	VMINTAVGNESVIETILHTMRLVEGQPKATDYEPSKVPSSI
Ga0210394_100915335	3300021420	Soil	NTAVGNEPVISTVLDTMRLVEGRPKATDYDPSRVPATR
Ga0210394_101367271	3300021420	Soil	PTRSLYHVMLNTAVGDGPVIQTILDTMRLVEGRPKATNYEPSNAAADPSRAG
Ga0210394_102950322	3300021420	Soil	FNADWPTRSLYHLMLNTAVGNGPVIKTILETMNLVAGSPKATDYEQSPAPTPAPSRN
Ga0210394_117463332	3300021420	Soil	LYHLMLNTAVGNEPVVRTILDTMRLVEGSPKATDYERPGVPTPVR
Ga0210384_112686002	3300021432	Soil	MLNTAVGNEPVVQTILDTMRLVEGRPKATNYEHPAVPAPQR
Ga0210391_105094642	3300021433	Soil	MLNTAVGNEPVISTILATMHLVEGRPKATAYEPARVPATH
Ga0210390_100985901	3300021474	Soil	AVGNEPVVQTILDTMYLVEGRPKATDYERPREPASQR
Ga0210398_104174951	3300021477	Soil	TRSLYHVMLNTAVGNEPVISTILTTMHLVEGRPKATDYEPTRIPATP
Ga0210410_105596123	3300021479	Soil	MINTAVGNESVIHTILHTMHLIEGHPKATDYDPQKVSAAI
Ga0213853_114853582	3300021861	Watersheds	YHMMMNTAVGNEPVINTILDTMHQVAGSPKATDYERPSAQPATH
Ga0242655_100403482	3300022532	Soil	AVGNEPVINTILDTMHQVAGSPKATDYERPKTPTAQSSN
Ga0212123_100262081	3300022557	Iron-Sulfur Acid Spring	VMINTAVGNESVIQTILHTMHLIEGYPKVTDYDPQKVSTAI
Ga0242665_100694162	3300022724	Soil	AVGNEPVINTILDTMHQVAGSPKATDYERPKTPTAHTSN
Ga0242665_101111471	3300022724	Soil	GNEPVINTILDTMHQVAGSPKATDYERPKTPTAQSSN
Ga0242665_101287362	3300022724	Soil	MMNTAVGNEPVINTILDTMHQVAGSPKATDYERPKTPTAQSSN
Ga0207664_102036523	3300025929	Agricultural Soil	SLYHMMINTAVGNEPVVKTILDTMHLVEGSPKATDYENPNPQPVRG
Ga0209648_102673052	3300026551	Grasslands Soil	RSLYHLMLNTAVGDGPVMETILSTMRRVEDRPKATDYEAPSAFSQKT
Ga0209218_10368622	3300027505	Forest Soil	TRSLYHVMVNTAVGNESVIQTILHTMHLIEGYPKATDYDPQKVSAAI
Ga0209008_10055954	3300027545	Forest Soil	INTAVGNESVIQTILHSMHLIEGHPKVTDYDPQKVSTAI
Ga0209115_10893562	3300027567	Forest Soil	MINTAVGNESVIETILNTMHLVEGRPKATDYEPAKVESSV
Ga0209333_10987031	3300027676	Forest Soil	AVGNEPVISTILTTMHLVEGRPKATDYEPTHIPATP
Ga0209655_103069451	3300027767	Bog Forest Soil	YHVMINTAVGNESVVETILNTMRLVEGRPKATDYERPRVPTSA
Ga0209656_102624351	3300027812	Bog Forest Soil	GNEAVMQTILDTMYLVESRPKATDYEAPKVPASSH
Ga0209811_104252752	3300027821	Surface Soil	AVGNESVINTILDTMHQVAGSPKATDYERPNPQPATHSSN
Ga0209580_100916612	3300027842	Surface Soil	IMVNTAVGNEPVIQTILDTMRLLEGSPKATEYERPNLTASSS
Ga0209274_103512961	3300027853	Soil	AVGNESVVEAILNTMRLVEGRPKATDYERPRVPTPA
Ga0209167_106682662	3300027867	Surface Soil	INTAVGNEPVIQTILDTMRLVEGRPKATGFEQPRVPAGSR
Ga0209275_109274622	3300027884	Soil	SADWPTRSLYHLMLNTAVGNEPVIHTILQTMRTVQGSPKATDYEQPKVPAAS
Ga0209168_103336971	3300027986	Surface Soil	RSLYHMMLNTAVGNEPVIRTILDTMRHLAGSPKATDYAQPNPQPATQ
Ga0137415_101715441	3300028536	Vadose Zone Soil	AVGDEPVIQTILNTMHLVEGRPKATGYESSVVPANR
Ga0302231_102289361	3300028775	Palsa	SLYHVMINTAVGDESVIETILHTMHLVEGRPKATDYERPKVPSSI
Ga0302303_101310192	3300028776	Palsa	TRSLYHVMINTAVGDESVIETILHTMHLVEGRPKATDYERPKVPSSI
Ga0265338_106725851	3300028800	Rhizosphere	NTAVGNEPVVQTILDTMHLVEGRPKATTYEHPNVPASSR
Ga0308309_115822001	3300028906	Soil	RSLYHAMLNTAVGNESVVKTILDTMRIVEGGPKATDYEHADVEVSR
Ga0308309_116585581	3300028906	Soil	INTAVGNEPVIQTILDTMRLVEGRPKATDYESPKVPASSR
Ga0222749_100303145	3300029636	Soil	SLYHLMLNTAVGNEPVVRTILETMRLVEGSPKATVYERPGVPTPVR
Ga0311358_112043462	3300029915	Bog	TAVGNEAVIETILHTMHLIEGQPKATDYEPAKVPSSV
Ga0302177_106104901	3300030053	Palsa	ADWPTRSLYHLMLNTAVGNTPVISTILSTMRLLEGSPRATDFEQPEKSVSRP
Ga0311356_104270893	3300030617	Palsa	NTAVGNEAVIQTILHTMHLVEGSPKATGYEPSKISATG
Ga0311356_112145022	3300030617	Palsa	VGNEPVISTILATMHLVEGRPKATDYEPTRLPATR
Ga0302312_100590963	3300030746	Palsa	ALGNESVIRTILNTMKLIEGQPKATDYDPQKTSVPA
Ga0075405_108077872	3300030847	Soil	SLYHIMLNTAVGNEPVVRTILDTMQLVEGRPKATDFEHPNVPAALR
Ga0302318_105180192	3300031258	Bog	YHMMINTAVGNDSVIETILHTMHLVEGRPKATDYEHPKVPSSV
Ga0302326_112171921	3300031525	Palsa	RSLYHVMINTAVGNESVIEAILHTMQLVEGRPKATAFERPKVPSSI
Ga0307476_101087901	3300031715	Hardwood Forest Soil	MINTAVGNEAVIETILHTMHRIEGHPKATDYEPPKVSTGA
Ga0307474_105376951	3300031718	Hardwood Forest Soil	VGDESVVDTILHTMHLDEDHPKATGYEPAKVPSSV
Ga0307479_100585394	3300031962	Hardwood Forest Soil	AVGNESVIETILNTMRMVEGRPKATAYEPPKVPSSV
Ga0307471_1003494062	3300032180	Hardwood Forest Soil	RSLYHLMLNTAVGDDPVMETILSTMRRVEDRPKATDYEAPSAFSRLT
Ga0307472_1015892121	3300032205	Hardwood Forest Soil	TRSLYHMMMNTAVGNEPVISTILDTMHQVAGSPKATDYESPKAQPSTR
Ga0335082_100273327	3300032782	Soil	PTRSLYHMMLNTAVGNEPVVKTILETMRRVEGAPKATDFESPRIAAESN
Ga0334850_004515_3_113	3300033828	Soil	AVGNEPVISTILATMHLVEGRPKATDYEPTRLPATR
Ga0370515_0175079_19_141	3300034163	Untreated Peat Soil	MINTALGNESVIRTILNTMKLIEGQPKATDYDPQKTSVPA
Ga0370514_061766_806_943	3300034199	Untreated Peat Soil	MMINTAVGNQAVIQTILDTMRLLEGSPKATDFEPPTARPDVPLSR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069188

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences