Metagenome / Metatranscriptome Family F069129

Basic Information
Family ID	F069129
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	43 residues
Representative Sequence	VRELERAVDAVVVGERERLVAKLGRSRRELLGQRGAVEERIG
Number of Associated Samples	108
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	8.13 %
% of genes near scaffold ends (potentially truncated)	81.45 %
% of genes from short scaffolds (< 2000 bps)	91.13 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Most Common Taxonomy
Group	Bacteria (91.935 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (15.323 % of family members)
Environment Ontology (ENVO)	Unclassified (29.839 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.387 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.14% β-sheet: 0.00% Coil/Unstructured: 42.86%
Feature Viewer

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Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF07883	Cupin_2	85.48
PF02811	PHP	7.26
PF00817	IMS	2.42
PF07733	DNA_pol3_alpha	0.81
PF01694	Rhomboid	0.81
PF13411	MerR_1	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG0389	Nucleotidyltransferase/DNA polymerase DinP involved in DNA repair	Replication, recombination and repair [L]	2.42
COG0587	DNA polymerase III, alpha subunit	Replication, recombination and repair [L]	0.81
COG0705	Membrane-associated serine protease, rhomboid family	Posttranslational modification, protein turnover, chaperones [O]	0.81
COG2176	DNA polymerase III, alpha subunit (gram-positive type)	Replication, recombination and repair [L]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.94 %
Unclassified	root	N/A	8.06 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.94 %
Unclassified	root	N/A	8.06 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.94 %
Unclassified	root	N/A	8.06 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	70.16 %
Unclassified	root	N/A	8.06 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	70.16 %
Unclassified	root	N/A	8.06 %

Name	Rank	Taxonomy	Distribution
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	21.77 %
unclassified Actinobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria	16.94 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10.48 %
Unclassified	root	N/A	8.06 %

Name	Rank	Taxonomy	Distribution
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	20.97 %
Actinobacteria bacterium 13_1_20CM_3_68_10	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_10	15.32 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	10.48 %
Unclassified	root	N/A	8.06 %
Actinobacteria bacterium 13_1_20CM_4_68_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_68_12	1.61 %

Name	Rank	Taxonomy	Distribution
Actinobacteria bacterium 13_1_20CM_3_68_10	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_10	15.32 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	10.48 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	8.06 %
Unclassified	root	N/A	8.06 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	1.61 %
Actinobacteria bacterium 13_1_20CM_4_68_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_68_12	1.61 %

Name	Rank	Taxonomy	Distribution
Actinobacteria bacterium 13_1_20CM_3_68_10	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_10	15.32 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	10.48 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	8.06 %
Unclassified	root	N/A	8.06 %
Actinobacteria bacterium 13_1_20CM_4_68_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_68_12	1.61 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	0.81 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Actinobacteria bacterium 13_1_20CM_3_68_10	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_10	15.32 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	10.48 %
Unclassified	root	N/A	8.06 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	4.84 %
Actinobacteria bacterium 13_1_20CM_4_68_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_68_12	1.61 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	0.81 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Actinobacteria bacterium 13_1_20CM_3_68_10	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_10	15.32 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	10.48 %
Unclassified	root	N/A	8.06 %
Solirubrobacter sp.	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	2.42 %
Solirubrobacter sp. URHD0082	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	2.42 %
Actinobacteria bacterium 13_1_20CM_4_68_12	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_68_12	1.61 %
Solirubrobacterales bacterium URHD0059	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	0.81 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000041\|ARcpr5oldR_c023516	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101637762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_10	1248	Open in IMG/M
3300000858\|JGI10213J12805_10002763	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300000956\|JGI10216J12902_101673160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_10	1267	Open in IMG/M
3300000956\|JGI10216J12902_104059068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_10	685	Open in IMG/M
3300000956\|JGI10216J12902_122900984	All Organisms → cellular organisms → Bacteria	810	Open in IMG/M
3300004081\|Ga0063454_100152073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1227	Open in IMG/M
3300004114\|Ga0062593_100461714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	1162	Open in IMG/M
3300004479\|Ga0062595_100367300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_10	1012	Open in IMG/M
3300004479\|Ga0062595_102283443	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300005166\|Ga0066674_10102033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1333	Open in IMG/M
3300005172\|Ga0066683_10224777	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_10	1161	Open in IMG/M
3300005180\|Ga0066685_10240629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1247	Open in IMG/M
3300005186\|Ga0066676_10056059	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	2260	Open in IMG/M
3300005328\|Ga0070676_10468858	All Organisms → cellular organisms → Bacteria	889	Open in IMG/M
3300005334\|Ga0068869_100916657	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_10	759	Open in IMG/M
3300005338\|Ga0068868_100471960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	1094	Open in IMG/M
3300005340\|Ga0070689_100578099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	971	Open in IMG/M
3300005340\|Ga0070689_101183249	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300005345\|Ga0070692_10390553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	876	Open in IMG/M
3300005345\|Ga0070692_10825763	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300005366\|Ga0070659_100198116	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1652	Open in IMG/M
3300005434\|Ga0070709_10504461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	919	Open in IMG/M
3300005434\|Ga0070709_11264211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_10	595	Open in IMG/M
3300005435\|Ga0070714_100245991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1652	Open in IMG/M
3300005437\|Ga0070710_10146100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1454	Open in IMG/M
3300005440\|Ga0070705_100703504	Not Available	794	Open in IMG/M
3300005455\|Ga0070663_100370489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1164	Open in IMG/M
3300005467\|Ga0070706_101093897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_10	734	Open in IMG/M
3300005526\|Ga0073909_10532714	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	572	Open in IMG/M
3300005526\|Ga0073909_10631143	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300005529\|Ga0070741_10054189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4793	Open in IMG/M
3300005536\|Ga0070697_100494689	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_10	1069	Open in IMG/M
3300005537\|Ga0070730_10316124	Not Available	1021	Open in IMG/M
3300005540\|Ga0066697_10815141	All Organisms → cellular organisms → Bacteria	507	Open in IMG/M
3300005548\|Ga0070665_101366725	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300005549\|Ga0070704_100231371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1508	Open in IMG/M
3300005549\|Ga0070704_100854955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_10	816	Open in IMG/M
3300005553\|Ga0066695_10870583	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300005553\|Ga0066695_10898843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
3300005561\|Ga0066699_10378513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_10	1012	Open in IMG/M
3300005576\|Ga0066708_10046379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	2414	Open in IMG/M
3300005577\|Ga0068857_100611834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1030	Open in IMG/M
3300005587\|Ga0066654_10595747	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300005614\|Ga0068856_100619913	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp.	1103	Open in IMG/M
3300005718\|Ga0068866_10758523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	671	Open in IMG/M
3300006034\|Ga0066656_10058130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2250	Open in IMG/M
3300006034\|Ga0066656_10981148	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300006058\|Ga0075432_10006435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3997	Open in IMG/M
3300006175\|Ga0070712_101612466	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300006358\|Ga0068871_100951743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_10	798	Open in IMG/M
3300006580\|Ga0074049_12707471	Not Available	1048	Open in IMG/M
3300006606\|Ga0074062_11918307	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_10	847	Open in IMG/M
3300006796\|Ga0066665_11110926	Not Available	602	Open in IMG/M
3300006847\|Ga0075431_100067933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3679	Open in IMG/M
3300006847\|Ga0075431_102170451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	510	Open in IMG/M
3300006854\|Ga0075425_103005318	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300006876\|Ga0079217_10059741	All Organisms → cellular organisms → Bacteria	1569	Open in IMG/M
3300006914\|Ga0075436_100154027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1618	Open in IMG/M
3300009012\|Ga0066710_100637018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1620	Open in IMG/M
3300009137\|Ga0066709_101570309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	944	Open in IMG/M
3300009176\|Ga0105242_11851749	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300009553\|Ga0105249_10815313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	998	Open in IMG/M
3300010036\|Ga0126305_10926332	Not Available	596	Open in IMG/M
3300010323\|Ga0134086_10367234	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300010360\|Ga0126372_10092355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2245	Open in IMG/M
3300010373\|Ga0134128_10571120	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	1259	Open in IMG/M
3300010398\|Ga0126383_11263380	All Organisms → cellular organisms → Bacteria	828	Open in IMG/M
3300011119\|Ga0105246_12455072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_10	512	Open in IMG/M
3300012001\|Ga0120167_1077363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	696	Open in IMG/M
3300012014\|Ga0120159_1003552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7957	Open in IMG/M
3300012045\|Ga0136623_10070565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1525	Open in IMG/M
3300012353\|Ga0137367_10276892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1204	Open in IMG/M
3300012505\|Ga0157339_1050498	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300012910\|Ga0157308_10383580	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300012960\|Ga0164301_10264054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1138	Open in IMG/M
3300012984\|Ga0164309_10788510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	764	Open in IMG/M
3300012985\|Ga0164308_10492097	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1024	Open in IMG/M
3300014745\|Ga0157377_10763702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	709	Open in IMG/M
3300017654\|Ga0134069_1026526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1762	Open in IMG/M
3300017695\|Ga0180121_10377861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	547	Open in IMG/M
3300017792\|Ga0163161_10984993	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_10	719	Open in IMG/M
3300018027\|Ga0184605_10361975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	654	Open in IMG/M
3300018056\|Ga0184623_10204977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	906	Open in IMG/M
3300018431\|Ga0066655_10105850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1586	Open in IMG/M
3300018476\|Ga0190274_12332014	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	632	Open in IMG/M
3300021080\|Ga0210382_10290336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	719	Open in IMG/M
3300021445\|Ga0182009_10259158	All Organisms → cellular organisms → Bacteria	865	Open in IMG/M
3300021510\|Ga0222621_1114709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	573	Open in IMG/M
3300024286\|Ga0247687_1055757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	596	Open in IMG/M
3300025322\|Ga0209641_10484221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	880	Open in IMG/M
3300025917\|Ga0207660_10183007	All Organisms → cellular organisms → Bacteria	1628	Open in IMG/M
3300025926\|Ga0207659_11855305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	511	Open in IMG/M
3300025935\|Ga0207709_10483339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	963	Open in IMG/M
3300025937\|Ga0207669_10524024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_68_12	952	Open in IMG/M
3300025944\|Ga0207661_10648053	All Organisms → cellular organisms → Bacteria	971	Open in IMG/M
3300025945\|Ga0207679_10549145	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium URHD0059	1036	Open in IMG/M
3300025986\|Ga0207658_10865363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	822	Open in IMG/M
3300026023\|Ga0207677_11248731	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300026041\|Ga0207639_10338789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1340	Open in IMG/M
3300026078\|Ga0207702_10015688	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6272	Open in IMG/M
3300026078\|Ga0207702_10108467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2464	Open in IMG/M
3300026078\|Ga0207702_10247874	All Organisms → cellular organisms → Bacteria	1671	Open in IMG/M
3300026118\|Ga0207675_100215174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1850	Open in IMG/M
3300026310\|Ga0209239_1113824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	1131	Open in IMG/M
3300026330\|Ga0209473_1234934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	649	Open in IMG/M
3300028379\|Ga0268266_10575462	Not Available	1081	Open in IMG/M
3300028596\|Ga0247821_10310297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	963	Open in IMG/M
3300028705\|Ga0307276_10104213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_10	689	Open in IMG/M
3300028782\|Ga0307306_10056979	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_4_68_12	983	Open in IMG/M
3300028784\|Ga0307282_10566860	All Organisms → cellular organisms → Bacteria	551	Open in IMG/M
3300028796\|Ga0307287_10056756	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_10	1446	Open in IMG/M
3300028807\|Ga0307305_10243068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_10	823	Open in IMG/M
3300028828\|Ga0307312_10222985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	1215	Open in IMG/M
3300028875\|Ga0307289_10337359	Not Available	620	Open in IMG/M
3300028884\|Ga0307308_10210371	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	932	Open in IMG/M
3300028884\|Ga0307308_10234450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → unclassified Actinobacteria → Actinobacteria bacterium 13_1_20CM_3_68_10	879	Open in IMG/M
3300030336\|Ga0247826_10331491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1102	Open in IMG/M
3300030336\|Ga0247826_10654269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	811	Open in IMG/M
3300031198\|Ga0307500_10105733	Not Available	761	Open in IMG/M
3300032174\|Ga0307470_10203236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1268	Open in IMG/M
3300032179\|Ga0310889_10568595	Not Available	582	Open in IMG/M
3300033551\|Ga0247830_10229039	All Organisms → cellular organisms → Bacteria	1399	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	72.58%
Host-Associated	Host-Associated	27.42%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	67.74%
Plants	Host-Associated → Plants	27.42%
Aquatic	Environmental → Aquatic	4.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	67.74%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.32%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.29%
Freshwater	Environmental → Aquatic → Freshwater	2.42%
Sediment	Environmental → Aquatic → Sediment	2.42%
Roots	Host-Associated → Plants → Roots	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	53.23%
Loam	Environmental → Terrestrial → Soil → Loam	14.52%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.06%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.26%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.42%
Ice	Environmental → Aquatic → Freshwater → Ice	1.61%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.81%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.19%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	18.55%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.48%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.26%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.03%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.23%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.42%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	1.61%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.61%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.61%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.81%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.81%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.81%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	15.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.87%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	4.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.03%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.03%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.23%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	3.23%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.42%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	1.61%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.61%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.61%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.61%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.61%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.81%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.81%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.81%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.81%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.81%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000041	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 old rhizosphere	Host-Associated	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006606	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012001	Permafrost microbial communities from Nunavut, Canada - A24_80cm_12M	Environmental	Open in IMG/M
3300012014	Permafrost microbial communities from Nunavut, Canada - A10_80cm_6M	Environmental	Open in IMG/M
3300012045	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ449 (21.06)	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012505	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.10.yng.090610	Host-Associated	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300017654	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300017695	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ540 (21.06) (version 2)	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300021510	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_coex	Environmental	Open in IMG/M
3300024286	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK28	Environmental	Open in IMG/M
3300025322	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_1 (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026330	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028705	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_115	Environmental	Open in IMG/M
3300028782	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_193	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028875	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_143	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069129

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ARcpr5oldR_0235162	3300000041	Arabidopsis Rhizosphere	RAVDAVVVGQRQGPIAQLGSAGGKLLRQRGAVQERIG*
INPhiseqgaiiFebDRAFT_1016377624	3300000364	Soil	ADAVVVGEGERVVAEIGRPRCQLLGLRGAVQERVR*
JGI10213J12805_100027631	3300000858	Soil	MRELERAVDAVVVGERERLVSELGGPRGQVLRVRGAVEERIG*
JGI10216J12902_1016731604	3300000956	Soil	ERAADAVVVGERERLVTEVGGTGGELLGLRSSVEERVR*
JGI10216J12902_1040590681	3300000956	Soil	ELERAVDPVVIGQRERFVAELRRARGELLGQRGAVEERIG*
JGI10216J12902_1229009841	3300000956	Soil	HAERLGRVGELERAVDPIVVGQRQCLIAELRRPGRELLRQRGPVQKRIG*
Ga0063454_1001520731	3300004081	Soil	LRRVRELERAVDAVVVGQRERRVAELGRARRELLGLGRTVEERIR*
Ga0062593_1004617143	3300004114	Soil	RELERAVDAVVVGERERLVAKLGRSRRELLGQRGAVEERIG*
Ga0062595_1003673002	3300004479	Soil	RPHAERLRSVRELERAVDAVMVGQRERLVTELGRARCQLLRQRGTVQKGIR*
Ga0062595_1022834431	3300004479	Soil	LERAVDAVVVGQRERLVAELGRACRQLLRQRSAVQERIR*
Ga0066674_101020331	3300005166	Soil	LRRVRELERPVDAVVVGERQRLVAELRGAGGELLRMRSAVEEGIG*
Ga0066683_102247773	3300005172	Soil	ELERAVDPVVVGQRERAVAELGRADRELLRQRSAVEERIG*
Ga0066685_102406293	3300005180	Soil	RLRRMGELERAVDPVVIGQRQRLVAELRCLGRELLRERGSVQERIG*
Ga0066676_100560591	3300005186	Soil	RRVRELERAVDAVVIGQRQRLVAELRGAGGQLLGQRSAVEERIG*
Ga0070676_104688582	3300005328	Miscanthus Rhizosphere	VRELERAVDAVVVGQRERLVAELGRACRQLLRQRSAVQERIR*
Ga0068869_1009166571	3300005334	Miscanthus Rhizosphere	ELERAVDPVVVGQRQRLVPELRRPRRQLLGQRRAVEERIG*
Ga0068868_1004719601	3300005338	Miscanthus Rhizosphere	VLRGVRELERAVEPVVVGERECLVAELDRLGGELFGQRGAVQERIG*
Ga0070689_1005780992	3300005340	Switchgrass Rhizosphere	MRELERAVDPLVVGQRQRLVTELGRPRRQFLRQRGAVEEGIG*
Ga0070689_1011832491	3300005340	Switchgrass Rhizosphere	RVRELERAVDAVVVGQRERLVAELGRACRQLLRQRSAVQERIR*
Ga0070692_103905532	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	VRELERAVDAVVVGQRERLVPELRRARRQLLRQRGAVQERIR*
Ga0070692_108257631	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	RMRELERAVDAVVISERERVVAELRRVRRELLRQRRAVEERIG*
Ga0070659_1001981161	3300005366	Corn Rhizosphere	ERLRSVRELERAVDAVVVGQRERLVAELGRACRQLLRQRSAVQERIR*
Ga0070709_105044612	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	VRELQRAVDAVVVGERERRVTELGGPCGKLLGQRGAVEERIG*
Ga0070709_112642111	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	RRVRELERAVDPVVVGQRKRAVVELGRLNRQLLRQRSAVEERIG*
Ga0070714_1002459912	3300005435	Agricultural Soil	VRELERAVDAVVVGERERRVTELGGPCGKLLGQRGAVEERIG*
Ga0070710_101461002	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VRELQRAVDAVVVGERERLVTELGGPCGKLLGQRGAVEERIG*
Ga0070705_1007035042	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	AERLGRVGELERAADAVVVGERQCRIPEIGGPRTELVGRRGTVEERIR*
Ga0070663_1003704891	3300005455	Corn Rhizosphere	ELERAVDAVVVGQRERLVAELGRACRQLLRQRSAVQERIR*
Ga0070706_1010938972	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	RVRELERAVDPVVVGQRKRAVVELGRLNRQLLRQRSAVEERIG*
Ga0073909_105327142	3300005526	Surface Soil	RLGRVGELERAADGVVVGERERLVAEVGGARGELVGQRGAVEERVR*
Ga0073909_106311431	3300005526	Surface Soil	RVRELERAVDAVVVGERERRVTELGGPCGKLLGQRGAVEERIG*
Ga0070741_100541896	3300005529	Surface Soil	DAERLRRLGELERPVDAVVVGERERLVAELRRACGQLLGLRGAVEERIG*
Ga0070697_1004946892	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LRELERAVDAVVVGQRQRAVAELRGPNRELLRQRSAVQERIG*
Ga0070730_103161241	3300005537	Surface Soil	DAVVVGERERLVAELRGSDRELLRLRSSVEERIG*
Ga0066697_108151412	3300005540	Soil	LRRVRELERAVDAVVVGERERLVAELRRPRGQLLGQRRPVEE*
Ga0070665_1013667251	3300005548	Switchgrass Rhizosphere	LRRVRELERAVDAVVVGQRERLVPELRRARRQLLRQRGAVQERIR*
Ga0070704_1002313711	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MGELERAADGVVVGERKRLVAEVGGAGGELVGQRGAVEERVR*
Ga0070704_1008549552	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	RELERAVDAVVVGERERLVAELGAARGQFLRPRGAVEKRIG*
Ga0066695_108705832	3300005553	Soil	RELERAVDAVVVGERERLVAELCRPRGQLLGQRRPVEE*
Ga0066695_108988431	3300005553	Soil	KLERAVDPVVVGQRERAVAELGRADRELLRQRSAVEERIG*
Ga0066699_103785131	3300005561	Soil	HAERLRRVRELERAVDAVVVGERKRFVPELRRPRGELLRLRRAVEERIR*
Ga0066708_100463794	3300005576	Soil	LRRMRELERAVEPVVVGEGERLIAELCRPRGQLLGERGAVQERIR*
Ga0068857_1006118342	3300005577	Corn Rhizosphere	LERAADGVVVGERERLVAEVGGARGELVGQRGAVEERVR*
Ga0066654_105957472	3300005587	Soil	RELERAVEPVVVGEGERLIAELCRPRGQLLGERGAVQERIR*
Ga0068856_1006199133	3300005614	Corn Rhizosphere	VRELERAVEPVVVGERERLVPQLGRLGRELFGQRGAVQERIG*
Ga0068866_107585231	3300005718	Miscanthus Rhizosphere	GELERAADGVVVGERERLVAEVGGARGELVGQRGAVEERVR*
Ga0066656_100581306	3300006034	Soil	RELERAVDPVVVGQRERAVAELGRPERELFGQRGAVQERIG*
Ga0066656_109811482	3300006034	Soil	LRRMRELERAVDAVVVRERESLVPELRSPRGELLRLRRSVEERIG*
Ga0075432_100064354	3300006058	Populus Rhizosphere	MRELERAVDAVVISERERVVAELRRVRRELLRQRRAVEERIG*
Ga0070712_1016124661	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	AEVLRGVRELERAVDAVVVGQRERLVAELGRACRQLLRQRSAVQERIR*
Ga0068871_1009517432	3300006358	Miscanthus Rhizosphere	RELERAVDAVVVGQRQRTVAELRGPNRELLRQRSAVQERIG*
Ga0074049_127074711	3300006580	Soil	VRELERAVHPVVVGQRKRLVPELGRPCRELLGLRGAVQERIG*
Ga0074062_119183071	3300006606	Soil	VDPVVVGQRERLVTQLGRASRQLLRQRRAVEERIG*
Ga0066665_111109261	3300006796	Soil	VGELERAVDPVVIGQRERVVAELGGPCGQLFGLGGSIEERVG*
Ga0075431_1000679332	3300006847	Populus Rhizosphere	MRELERAVDAVVISERERVVAELRRVRRELLRQRRAVEDE*
Ga0075431_1021704512	3300006847	Populus Rhizosphere	RELERAADAVVVGERQGVVTEVGGTGGELLGLRSPVEERVR*
Ga0075425_1030053181	3300006854	Populus Rhizosphere	PHAERLRRVRELERAVDAVVVGQRERVVAELGRASRELLRQRGAVQERIG*
Ga0079217_100597415	3300006876	Agricultural Soil	AEVLRRVRELERAVDTVVVCERERLVAELGRPQGELLGMGGAVEERIR*
Ga0075436_1001540274	3300006914	Populus Rhizosphere	VDAVVVGQRERAVTELGGANRKVLRQRGAVQERIG*
Ga0066710_1006370182	3300009012	Grasslands Soil	MRELERAVDAVVVGERERLVAELRRPRGQLLGQRRPVEE
Ga0066709_1015703091	3300009137	Grasslands Soil	LERAVDAVVVCERERFVAELCRPRGQLLGQRCPVEERIG*
Ga0105242_118517491	3300009176	Miscanthus Rhizosphere	LERAVDPVVVGQRQRLVPELRRPRRQLLGQRRAVEERIG*
Ga0105249_108153132	3300009553	Switchgrass Rhizosphere	MRELERAVDAVVISERERVVAELRRVRSELLRQRRAVEERIG*
Ga0126305_109263322	3300010036	Serpentine Soil	ELERAVDAVVVGERERLVAELGGAEGELLRQRGAVEERIR*
Ga0134086_103672342	3300010323	Grasslands Soil	ELERAIEPVVVGEGERLVAQLCRPRGELLGERGAVEERIR*
Ga0126372_100923552	3300010360	Tropical Forest Soil	MCELERAVDAVVVGERERLVAELGRARGELLGQRRAVEERIR*
Ga0134128_105711202	3300010373	Terrestrial Soil	MRELERAVDAVVVGQRERLVAELGRACRQLLRQRSAVQERIR*
Ga0126383_112633802	3300010398	Tropical Forest Soil	VGELQRTVDAVVVGERERLVAELGSARGQLLRQRRAVEERIR*
Ga0105246_124550721	3300011119	Miscanthus Rhizosphere	DAVVVGQRQRTVAELRGPNRELLRQRSAVQERIG*
Ga0120167_10773632	3300012001	Permafrost	VIEPHADRLRRVRELERAAHPVVIGERERVVAELGGRERQFLGMRCAVEERIG*
Ga0120159_10035524	3300012014	Permafrost	VRELERAAHPVVIGERERVVAELGGRERQFLGMRCAVEERIG*
Ga0136623_100705651	3300012045	Polar Desert Sand	PEVLRRVRELERAVDTVVVGERERLVAELGCAQRELLRVRGTVEERIR*
Ga0137367_102768922	3300012353	Vadose Zone Soil	MHAERLRRVRELERAVDTVVVGERERCVAELGRADDQFFRERSAVQKRIG*
Ga0157339_10504982	3300012505	Arabidopsis Rhizosphere	ELERAVDAVVVGQRQGPIAQLGSAGGKLLRQRGAVQERIG*
Ga0157308_103835802	3300012910	Soil	VRELERAVDAVVVGERERLVAKLGRSRRELLGQRGAVEERIG*
Ga0164301_102640542	3300012960	Soil	MRELERAVDAVVIGQRQRLVAELGRPRRELLRQRGAVEERIR*
Ga0164309_107885101	3300012984	Soil	PVDAVVVGERECLVAELGGARGELLGLRGAVEERVG*
Ga0164308_104920971	3300012985	Soil	VRELQRAVDAVVIGQRERLVAELGRSCRQLLRQRGAVEERIG*
Ga0157377_107637022	3300014745	Miscanthus Rhizosphere	ERLGCMGELERAADGVVVGERERLVAEVGGARGELVGQRGAVEERVR*
Ga0134069_10265261	3300017654	Grasslands Soil	RLGKLERAVDPVVVGQRERAVAKLGRADRELLWQRSAVEERIG
Ga0180121_103778613	3300017695	Polar Desert Sand	RADADELRGVRELERAVDAVVVGERERLVAELRRTQRQLLGVRGAVKERIG
Ga0163161_109849931	3300017792	Switchgrass Rhizosphere	RLRELERTVDPVVVGQRKRAVAELGGPNRQLLRQRSAVEKRIG
Ga0184605_103619753	3300018027	Groundwater Sediment	RELERAVDAVVVGQRKRLVAEISRAGGELFRVRSAVQERIG
Ga0184623_102049772	3300018056	Groundwater Sediment	AERLRRMGELERAVDAVVVGERERFVAEFSGPCGELLGLRGPVEERVG
Ga0066655_101058501	3300018431	Grasslands Soil	LSRLRELERAVDSVVVGQRERAVAELGRPERELFGQRGAVQERIG
Ga0190274_123320141	3300018476	Soil	ELRRVGELERAVDAVVVGEREGLVAELRRPQSELLGMRSAVEERIG
Ga0210382_102903361	3300021080	Groundwater Sediment	ERLRRVRELERAVNPVVVGQRERLVAEISRAGGELFRVRSAVQERIG
Ga0182009_102591582	3300021445	Soil	VRELQRAVDAVVVGERERLVAELRRAGREFLGERRTVEERIR
Ga0222621_11147091	3300021510	Groundwater Sediment	LERSVHTVVIRERERLVAELGRAGRELLGVRGPVEERIG
Ga0247687_10557571	3300024286	Soil	RLGRVGELERAADAVVVGERQCRIPEIGGPRTELVGRRGTVEERIR
Ga0209641_104842212	3300025322	Soil	VRELERAVDAVVVGERERLVPELGRARGELFRLRRPVQE
Ga0207660_101830071	3300025917	Corn Rhizosphere	ELERAVDPVVVGQRQRLVPELRRPRRQLLGQRRAVEERIG
Ga0207659_118553052	3300025926	Miscanthus Rhizosphere	AEGFGRMRELERAVDAVVISERERVVAELRRVRRELLRQRRAVEERIG
Ga0207709_104833392	3300025935	Miscanthus Rhizosphere	MGELERAADGVVVGERKRLVAEVGGAGGELVGQRGAVEERIR
Ga0207669_105240241	3300025937	Miscanthus Rhizosphere	RSVRELERAVDAVVVGQRERLVAELGRACRQLLRQRSAVQERIR
Ga0207661_106480532	3300025944	Corn Rhizosphere	MRELERAVDPLVVGQRQRLVTELGRPRRQFLRQRGAVEEGIG
Ga0207679_105491452	3300025945	Corn Rhizosphere	VGELERAVDAVVVGERERVVAELGGPRGELLGQRGAVEERIG
Ga0207658_108653631	3300025986	Switchgrass Rhizosphere	ERLRSVRELERAVDAVVVGQRERLVAELGRACRQLLRQRSAVQERIR
Ga0207677_112487311	3300026023	Miscanthus Rhizosphere	VEPVVVGERERLVPQFGRLGRELFGQRGAVQERIG
Ga0207639_103387891	3300026041	Corn Rhizosphere	ERLRSMRKLERAVDAVVVGQRERLVAELGRACRQLLRQRSAVQERIR
Ga0207702_100156883	3300026078	Corn Rhizosphere	VRELQRAVDAVVVGERERLVAELRRAGREFLGQRRTVEERIR
Ga0207702_101084675	3300026078	Corn Rhizosphere	VGELERAADGVVVGERERLVAEVGGARGELVGQRGAVEERVR
Ga0207702_102478741	3300026078	Corn Rhizosphere	ERAVDPVVVGQRQRLIPELGRPRRQFLRQRGAVEEGIG
Ga0207675_1002151744	3300026118	Switchgrass Rhizosphere	MRELERAVDAVVISERERVVAELRRVRRELLRQRRAVEERIG
Ga0209239_11138243	3300026310	Grasslands Soil	RASDRPDADRLRHMRELERAVDAVVVGERERFVAELCRPRGQLLGQRCPVEERIG
Ga0209473_12349342	3300026330	Soil	GELQRAVDAVMVGQRKRAVAELGSPNRKLLGQRGAVEERIG
Ga0268266_105754621	3300028379	Switchgrass Rhizosphere	ERLRRVRELERAVDAVVVGQRERLVPELRRARRQLLRQRGAVQERIR
Ga0247821_103102971	3300028596	Soil	AQPERLRRVSELERPVKAVVVGERERLVAELGGARGELLGLRSAVEERVG
Ga0307276_101042132	3300028705	Soil	LRELERAVDAVVVGQRECAVAELGGPKRDLLGQRSTVEKRIG
Ga0307306_100569791	3300028782	Soil	ARDRPHAERLRRMRELERAVDAVVVGQRERLVAELSRARRQLFRQRGAVQKRIR
Ga0307282_105668602	3300028784	Soil	AERLRCVRELERAVEPVVVGERKRLVAELGRLGRELFGQRGAVQERIG
Ga0307287_100567564	3300028796	Soil	RLRELERAVDPVVVGQRKRAVAELGGADRELLRQRSAVEERIG
Ga0307305_102430682	3300028807	Soil	AVDAVVVGERERLVAEVGGPRGELLGLRGAVEERIR
Ga0307305_103637101	3300028807	Soil	GAGDRADAERLRGVRELERAVDPVVIRQRQRLVAELRRPRGEILGQRSAVEERIR
Ga0307312_102229853	3300028828	Soil	ELERAVDPVVIGQRQRLVAELRSPRGELLGQRGAVEERIR
Ga0307289_103373591	3300028875	Soil	ELERAVDAVVVGERERLVAEVGGPRGELLGLRGAVEERIR
Ga0307308_102103714	3300028884	Soil	RSFPPIDAVVVGERERLVSKLGRAGRELLRVGSSVEERIG
Ga0307308_102344502	3300028884	Soil	ERAVDAVVVGQRERPVAELGGPKREFLGQRSAVEKRIR
Ga0247826_103314913	3300030336	Soil	DELGRVGELERAVDAVVVGECERLVAELRRALRELLRMGRPVEERIG
Ga0247826_106542691	3300030336	Soil	VDAVVIGERKRLVAELRRARRELLGMRCPVEEGIG
Ga0307500_101057332	3300031198	Soil	VDAVVVGEREPFVAEVGGPRGELLGLRGAVEERIR
Ga0307470_102032364	3300032174	Hardwood Forest Soil	RELERAVDAVVISERERVVAELRRVRRELLRQRRAVEERIG
Ga0310889_105685952	3300032179	Soil	HAERLGRVRELQRAVDAVVVGERERRVTELGGPCGKLLGQRGAVEERIG
Ga0247830_102290391	3300033551	Soil	PGRVRELERAVDAVVVGQRERQSSATRRSRRQLLGERRSVEERIG

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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