Metagenome Family F069127

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F069127
Family Type	Metagenome
Number of Sequences	124
Average Sequence Length	67 residues
Representative Sequence	LPFFQAMASVLIANVLTVTFVYCFAKIHQKECIGEEEGRLTHLWLIILVFLFMLYGLYTWGV
Number of Associated Samples	107
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	53.66 %
% of genes near scaffold ends (potentially truncated)	26.61 %
% of genes from short scaffolds (< 2000 bps)	76.61 %
Associated GOLD sequencing projects	100
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (93.548 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (11.290 % of family members)
Environment Ontology (ENVO)	Unclassified (35.484 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (36.290 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 61.11% β-sheet: 0.00% Coil/Unstructured: 38.89%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF06147	DUF968	20.97
PF00359	PTS_EIIA_2	12.10
PF00149	Metallophos	8.06
PF00702	Hydrolase	3.23
PF13493	DUF4118	2.42
PF13701	DDE_Tnp_1_4	2.42
PF00685	Sulfotransfer_1	2.42
PF00486	Trans_reg_C	1.61
PF01266	DAO	1.61
PF00571	CBS	1.61
PF00120	Gln-synt_C	1.61
PF04892	VanZ	0.81
PF01544	CorA	0.81
PF01083	Cutinase	0.81
PF04098	Rad52_Rad22	0.81
PF13340	DUF4096	0.81
PF02518	HATPase_c	0.81
PF08681	DUF1778	0.81
PF01381	HTH_3	0.81
PF09242	FCSD-flav_bind	0.81
PF05096	Glu_cyclase_2	0.81
PF16363	GDP_Man_Dehyd	0.81
PF05015	HigB-like_toxin	0.81
PF01243	Putative_PNPOx	0.81
PF05565	Sipho_Gp157	0.81
PF03795	YCII	0.81
PF00795	CN_hydrolase	0.81
PF02604	PhdYeFM_antitox	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG0598	Mg2+ and Co2+ transporter CorA	Inorganic ion transport and metabolism [P]	0.81
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.81
COG2350	YciI superfamily enzyme, includes 5-CHQ dehydrochlorinase, contains active-site pHis	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.81
COG3549	Plasmid maintenance system killer protein	Defense mechanisms [V]	0.81
COG3823	Glutamine cyclotransferase	Posttranslational modification, protein turnover, chaperones [O]	0.81
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.81
COG4453	Uncharacterized conserved protein, DUF1778 family	Function unknown [S]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	93.55 %
Unclassified	root	N/A	6.45 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	93.55 %
Unclassified	root	N/A	6.45 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	93.55 %
Unclassified	root	N/A	6.45 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	83.06 %
Unclassified	root	N/A	6.45 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	4.84 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	78.23 %
Unclassified	root	N/A	6.45 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.84 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.61 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	76.61 %
Unclassified	root	N/A	6.45 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.84 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	1.61 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	13.71 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6.45 %
Unclassified	root	N/A	6.45 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.84 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	12.90 %
Unclassified	root	N/A	6.45 %
Candidatus Sulfotelmatomonas	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas	4.84 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	2.42 %
Thiocapsa	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa	0.81 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.81 %

Name	Rank	Taxonomy	Distribution
Methyloceanibacter superfactus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	10.48 %
Unclassified	root	N/A	6.45 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	4.84 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	2.42 %
Thiocapsa marina	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → Thiocapsa marina	0.81 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.81 %

Name	Rank	Taxonomy	Distribution
Methyloceanibacter superfactus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	10.48 %
Unclassified	root	N/A	6.45 %
Candidatus Sulfotelmatomonas gaucii	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	4.84 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	2.42 %
Thiocapsa marina 5811	strain	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → Thiocapsa marina → Thiocapsa marina 5811	0.81 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c0885841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1001	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0886362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	967	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c0886895	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1758	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_100684776	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	861	Open in IMG/M
3300000787\|JGI11643J11755_11720771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	582	Open in IMG/M
3300000787\|JGI11643J11755_11744790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	558	Open in IMG/M
3300000789\|JGI1027J11758_12997646	Not Available	778	Open in IMG/M
3300001139\|JGI10220J13317_10021788	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	665	Open in IMG/M
3300004114\|Ga0062593_100272672	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1418	Open in IMG/M
3300004463\|Ga0063356_105947154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	523	Open in IMG/M
3300005045\|Ga0071328_127150	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5349	Open in IMG/M
3300005093\|Ga0062594_100171859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1461	Open in IMG/M
3300005105\|Ga0066812_1002179	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300005169\|Ga0066810_10175211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	526	Open in IMG/M
3300005331\|Ga0070670_100038515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	4111	Open in IMG/M
3300005339\|Ga0070660_100013819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5807	Open in IMG/M
3300005343\|Ga0070687_100874051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	642	Open in IMG/M
3300005347\|Ga0070668_100714736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	884	Open in IMG/M
3300005438\|Ga0070701_10292549	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	998	Open in IMG/M
3300005563\|Ga0068855_100034381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	6046	Open in IMG/M
3300005577\|Ga0068857_100015743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	6616	Open in IMG/M
3300005718\|Ga0068866_10018909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3125	Open in IMG/M
3300005841\|Ga0068863_100004189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	14241	Open in IMG/M
3300006175\|Ga0070712_101678114	Not Available	556	Open in IMG/M
3300006845\|Ga0075421_102087813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	601	Open in IMG/M
3300006903\|Ga0075426_10045375	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3140	Open in IMG/M
3300007076\|Ga0075435_100005822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	8665	Open in IMG/M
3300009146\|Ga0105091_10269813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	824	Open in IMG/M
3300009147\|Ga0114129_11335632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	887	Open in IMG/M
3300009156\|Ga0111538_13124811	All Organisms → cellular organisms → Bacteria → Proteobacteria	577	Open in IMG/M
3300009162\|Ga0075423_10112553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2851	Open in IMG/M
3300009171\|Ga0105101_10618836	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	538	Open in IMG/M
3300009177\|Ga0105248_10006272	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	13041	Open in IMG/M
3300009521\|Ga0116222_1085434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1360	Open in IMG/M
3300009553\|Ga0105249_10694652	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1077	Open in IMG/M
3300009553\|Ga0105249_12008544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	651	Open in IMG/M
3300009683\|Ga0116224_10177428	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1023	Open in IMG/M
3300009836\|Ga0105068_1092060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	584	Open in IMG/M
3300009839\|Ga0116223_10109628	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1740	Open in IMG/M
3300010043\|Ga0126380_10062351	All Organisms → cellular organisms → Bacteria	2073	Open in IMG/M
3300010047\|Ga0126382_10886519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	770	Open in IMG/M
3300010396\|Ga0134126_11432907	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	763	Open in IMG/M
3300010403\|Ga0134123_10232209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1593	Open in IMG/M
3300011119\|Ga0105246_10778470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	847	Open in IMG/M
3300011996\|Ga0120156_1084484	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	577	Open in IMG/M
3300012893\|Ga0157284_10280809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	537	Open in IMG/M
3300012900\|Ga0157292_10053204	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1095	Open in IMG/M
3300012912\|Ga0157306_10012552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1683	Open in IMG/M
3300012955\|Ga0164298_11258385	Not Available	564	Open in IMG/M
3300012958\|Ga0164299_10827271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	663	Open in IMG/M
3300012958\|Ga0164299_10900525	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	642	Open in IMG/M
3300012960\|Ga0164301_11577650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	544	Open in IMG/M
3300012961\|Ga0164302_10019056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	2926	Open in IMG/M
3300012961\|Ga0164302_10151418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1366	Open in IMG/M
3300012961\|Ga0164302_10165627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1320	Open in IMG/M
3300012984\|Ga0164309_11192965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	638	Open in IMG/M
3300012986\|Ga0164304_10034385	All Organisms → cellular organisms → Bacteria → Proteobacteria	2628	Open in IMG/M
3300012987\|Ga0164307_11418945	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	585	Open in IMG/M
3300013296\|Ga0157374_11766481	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	644	Open in IMG/M
3300013308\|Ga0157375_10044735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4304	Open in IMG/M
3300013764\|Ga0120111_1021608	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	1802	Open in IMG/M
3300013770\|Ga0120123_1032337	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	1089	Open in IMG/M
3300014056\|Ga0120125_1020903	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	1379	Open in IMG/M
3300014823\|Ga0120170_1014662	All Organisms → cellular organisms → Bacteria	2377	Open in IMG/M
3300014969\|Ga0157376_12794502	Not Available	528	Open in IMG/M
3300015077\|Ga0173483_10025483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2118	Open in IMG/M
3300017792\|Ga0163161_10003814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	10568	Open in IMG/M
3300017792\|Ga0163161_11585379	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	577	Open in IMG/M
3300018028\|Ga0184608_10213956	Not Available	845	Open in IMG/M
3300018052\|Ga0184638_1137479	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	887	Open in IMG/M
3300018076\|Ga0184609_10027192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2323	Open in IMG/M
3300018078\|Ga0184612_10392445	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	698	Open in IMG/M
3300018078\|Ga0184612_10407230	All Organisms → cellular organisms → Bacteria	682	Open in IMG/M
3300018078\|Ga0184612_10545439	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	558	Open in IMG/M
3300020186\|Ga0163153_10050087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2855	Open in IMG/M
3300022892\|Ga0247753_1060847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	501	Open in IMG/M
3300023072\|Ga0247799_1036877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	786	Open in IMG/M
3300025315\|Ga0207697_10341595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	665	Open in IMG/M
3300025327\|Ga0209751_10906535	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	676	Open in IMG/M
3300025900\|Ga0207710_10397966	Not Available	707	Open in IMG/M
3300025903\|Ga0207680_10242711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1242	Open in IMG/M
3300025905\|Ga0207685_10203875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	931	Open in IMG/M
3300025919\|Ga0207657_10014812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	7591	Open in IMG/M
3300025941\|Ga0207711_11091362	Not Available	739	Open in IMG/M
3300025942\|Ga0207689_10116089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2200	Open in IMG/M
3300025972\|Ga0207668_10511148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1035	Open in IMG/M
3300025986\|Ga0207658_10044483	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3232	Open in IMG/M
3300026023\|Ga0207677_11852548	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	560	Open in IMG/M
3300026041\|Ga0207639_10049797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3178	Open in IMG/M
3300026089\|Ga0207648_12131092	All Organisms → cellular organisms → Bacteria	521	Open in IMG/M
3300027561\|Ga0209887_1045311	All Organisms → cellular organisms → Bacteria	962	Open in IMG/M
3300027561\|Ga0209887_1056415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	837	Open in IMG/M
3300027570\|Ga0208043_1202225	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	502	Open in IMG/M
3300027577\|Ga0209874_1059852	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	968	Open in IMG/M
3300027909\|Ga0209382_10154056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2660	Open in IMG/M
3300027909\|Ga0209382_10591888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1209	Open in IMG/M
3300028592\|Ga0247822_10472093	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	989	Open in IMG/M
3300028596\|Ga0247821_10940145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	577	Open in IMG/M
3300031229\|Ga0299913_10602740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1081	Open in IMG/M
3300031274\|Ga0307442_1047249	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1369	Open in IMG/M
3300031359\|Ga0307426_1128960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → Thiocapsa marina → Thiocapsa marina 5811	918	Open in IMG/M
3300031364\|Ga0307445_10324305	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	520	Open in IMG/M
3300031474\|Ga0170818_111242831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	706	Open in IMG/M
3300031537\|Ga0307419_10328605	All Organisms → cellular organisms → Bacteria → Proteobacteria	540	Open in IMG/M
3300031539\|Ga0307380_10093867	All Organisms → cellular organisms → Bacteria	3115	Open in IMG/M
3300031539\|Ga0307380_10114193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2753	Open in IMG/M
3300031539\|Ga0307380_10257579	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1644	Open in IMG/M
3300031565\|Ga0307379_10658600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	948	Open in IMG/M
3300031566\|Ga0307378_10060417	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4139	Open in IMG/M
3300031566\|Ga0307378_10216647	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1868	Open in IMG/M
3300031652\|Ga0315553_10317485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	642	Open in IMG/M
3300031720\|Ga0307469_10884387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	826	Open in IMG/M
3300031820\|Ga0307473_11130054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	579	Open in IMG/M
3300031873\|Ga0315297_10353512	All Organisms → cellular organisms → Bacteria → Proteobacteria	1230	Open in IMG/M
3300031873\|Ga0315297_10532177	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	988	Open in IMG/M
3300031949\|Ga0214473_11221754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	777	Open in IMG/M
3300032075\|Ga0310890_10769067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	760	Open in IMG/M
3300032156\|Ga0315295_10478617	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatomonas → Candidatus Sulfotelmatomonas gaucii	1266	Open in IMG/M
3300032180\|Ga0307471_100669626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter superfactus	1201	Open in IMG/M
3300032205\|Ga0307472_100263908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1359	Open in IMG/M
3300032205\|Ga0307472_102059192	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	573	Open in IMG/M
3300033550\|Ga0247829_10413602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1110	Open in IMG/M
3300033551\|Ga0247830_10328976	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1177	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	70.16%
Host-Associated	Host-Associated	29.84%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	56.45%
Plants	Host-Associated → Plants	29.84%
Aquatic	Environmental → Aquatic	13.71%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	56.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere	19.35%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.48%
Freshwater	Environmental → Aquatic → Freshwater	4.84%
Sediment	Environmental → Aquatic → Sediment	4.84%
Marine	Environmental → Aquatic → Marine	4.03%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	13.71%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.48%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.84%
Clay	Environmental → Terrestrial → Soil → Clay	4.84%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	4.03%
Loam	Environmental → Terrestrial → Soil → Loam	4.03%
Lake	Environmental → Aquatic → Freshwater → Lake	3.23%
Sand	Environmental → Terrestrial → Soil → Sand	3.23%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	13.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.48%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.84%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	4.84%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.84%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	4.84%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	4.03%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.03%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.23%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.23%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	3.23%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.42%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.61%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.61%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.81%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.45%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.45%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.84%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	4.84%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	4.84%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.03%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	4.03%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.03%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	3.23%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.23%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	3.23%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	3.23%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	2.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.42%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.61%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.61%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	0.81%
Salt Marsh Sediment	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh Sediment	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.81%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.81%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.81%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001139	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005045	Permafrost microbial communities from Fox Tunnel, Fairbanks, Alaska, USA	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005105	Soil and rhizosphere microbial communities from Laval, Canada - mgHPC	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009171	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009521	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009683	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaG	Environmental	Open in IMG/M
3300009836	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011996	Permafrost microbial communities from Nunavut, Canada - A39_65cm_12M	Environmental	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300013764	Permafrost microbial communities from Nunavut, Canada - A28_35cm_6M	Environmental	Open in IMG/M
3300013770	Permafrost microbial communities from Nunavut, Canada - A15_5cm_18M	Environmental	Open in IMG/M
3300014056	Permafrost microbial communities from Nunavut, Canada - A20_5cm_0M	Environmental	Open in IMG/M
3300014823	Permafrost microbial communities from Nunavut, Canada - A3_80cm_0M	Environmental	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300020186	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP6.IB-1	Environmental	Open in IMG/M
3300022892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S169-409R-5	Environmental	Open in IMG/M
3300023072	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S151-409C-6	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025327	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027561	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027570	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_9_AC metaG (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031274	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1604-30	Environmental	Open in IMG/M
3300031359	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1603-40	Environmental	Open in IMG/M
3300031364	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - SW1603-30	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031537	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - WE1602-30	Environmental	Open in IMG/M
3300031539	Soil microbial communities from Risofladan, Vaasa, Finland - UN-3	Environmental	Open in IMG/M
3300031565	Soil microbial communities from Risofladan, Vaasa, Finland - UN-2	Environmental	Open in IMG/M
3300031566	Soil microbial communities from Risofladan, Vaasa, Finland - UN-1	Environmental	Open in IMG/M
3300031652	Salt marsh sediment microbial communities from the Plum Island Ecosystem LTER, Massachusetts, United States - Salt Marsh Sediment SW1601-40	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031873	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032156	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_08858412	3300000033	Soil	MVVQQISGTVDFFKAMAPLLVANILTVTFVYCFAKISQLEKNREEKGKLTYLWLLILVFLFMLYGLYVWGIGPLSKMKDGI*
ICChiseqgaiiDRAFT_08863621	3300000033	Soil	MVVQQISGTAAFFKAMAPLLVANILTVTFVYCFAKISQLEQNREEEGKLTYLWLLILVFLFMLYGLYVWGVA*
ICChiseqgaiiDRAFT_08868953	3300000033	Soil	MVVQQISGTVDFFKAMAPLLVANILTVTXVXCFAKIXQXEXXREXXGKLTXLWLLILVFLFMLYGLYVWGIGPLSKMKDGI*
INPhiseqgaiiFebDRAFT_1006847761	3300000364	Soil	MVEHASGTVAFFHAMAPVLIANGSTVAFVYCFAKIRQKELAGEEEGRLXYXWLXIMVFLFMXYGLYTWXVYXFKK*
JGI11643J11755_117207711	3300000787	Soil	MXXVDGTVAXFXAMAPVLIANVLTVTFVYCFAKIHQKERIGEEEGRLTYLWLIVLVFLFMLYGLYTWGVYPFKQ*
JGI11643J11755_117447901	3300000787	Soil	MVVQQISGTVDFFKAMAPLLVANILTVTFVYCFAKISQLEQNREEEGKLTYLWLLILVFLFMLYGLYVWGVA*
JGI1027J11758_129976462	3300000789	Soil	MLEHATDTVSFFQAMAPILIANVLTVTFVYCFAKIHXKELAGXEEGRLTYLWLIIXVXLFMLYXLYXWGVYPLKQ*
JGI10220J13317_100217882	3300001139	Soil	RSRCQSQVLGTEPMERVDGPFFQAMASVLIANVLTVTFVYCFAKIQQKECIGEEEGRLTHLWLIILVFLFMLYGLYTWGV*
Ga0062593_1002726722	3300004114	Soil	LEHATGTVPSFYTMAPILIANVLTVTFVYCFAKIHQKELTGEEEGRLTYLWLIIMVCVFMLYGLYTWGVYPL*
Ga0063356_1059471541	3300004463	Arabidopsis Thaliana Rhizosphere	MVQHISGTVAFFKAMAPVLIANVLTVTFVYCFAKISQLEQKGEEEGRLTYLWLLVLVFLFMLYGLYVWGVGPLKR*
Ga0071328_1271503	3300005045	Permafrost	MLEHATGTVSFFQAIAPVLIANVLTVAFVYAFSKIHQKEHTGEEGGRLTYLWLIIMVFLFMLYGLYTWGVYPYKQ*
Ga0062594_1001718594	3300005093	Soil	MLEHATGTVSFLQTMAPVLIANVLAVTFVYCFAKIHQKELAGEKEGRLTYLWLIILVLLFMLYGLYAWGVYPFKR*
Ga0066812_10021792	3300005105	Soil	MAPVLTANVLTVTFVYCFVKIAQKELKGEEEGRLTYLWLITMVFLFMLYGLYIWGVDPFKK*
Ga0066810_101752111	3300005169	Soil	MAPVLTANVLTVTFVYCFVKIAQKELKGEEEGRLTYLWLITMVFLFMLYGLYIWGVD
Ga0070670_1000385151	3300005331	Switchgrass Rhizosphere	MASVLIANVLTVTFVYCFAKIHQKECIGKEEGRLTHLWLIILVFLFMLYGLYTWSV*
Ga0070660_1000138191	3300005339	Corn Rhizosphere	WNASTEQLPFFQAMASVLIANVLTVTFVYCFAKIHQKECIGEEEGRLTHLWLIILVFLFMLYGLYTWGV*
Ga0070687_1008740512	3300005343	Switchgrass Rhizosphere	MASVLIANVLTVTFVYCFAKIHQKECIGEEEGRLTHLWLIILVFLFMLYGLYTWGV*
Ga0070668_1007147362	3300005347	Switchgrass Rhizosphere	MASVLIANVLTVTFVYCFAKIHQKECIGEEEGRLTHLWLIILVFLFMLY
Ga0070701_102925492	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MASVLIANVLTVTFVYCFAKIHQKECIGEEEGRLTHLWLIILVFLFMLYGLYTWSV*
Ga0068855_1000343811	3300005563	Corn Rhizosphere	LPFFQAMASVLIANVLTVTFVYCFAKIHQKECIGEEEGRLTHLWLIILVFLFMLYGLYTWSV*
Ga0068857_1000157431	3300005577	Corn Rhizosphere	LPFFQAMASVLIANVLTVTFVYCFAKIHQKECIGEEEGRLTHLWLIILVFLFMLYGLYTWGV*
Ga0068866_100189091	3300005718	Miscanthus Rhizosphere	QLPFFQAMASVLIANVLTVTFVYCFAKIHQKECIGEEEGRLTHLWLIILVFLFMLYGLYTWGV*
Ga0068863_10000418917	3300005841	Switchgrass Rhizosphere	LPFFQAMASVLIANVLTVTFVYCFAKIHQKECIGKEEGRLTHLWLIILVFLFMLYGLYTWGV*
Ga0070712_1016781141	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MLEHPTSTVSFFQAMAPLLTANVLTVTFVYCFAKIHQKELAGEEEGRLTYLWLIILILLFMLYGLYAWRVYPFER*
Ga0075421_1020878132	3300006845	Populus Rhizosphere	MVVQQISGTAAFFKAMAPLLVANILTVTFVYCFAKISQLEQNREEEGKLTYLWLLLLVLLFMMYGMYVWDVG*
Ga0075426_100453751	3300006903	Populus Rhizosphere	MASVLIANVLTVTFVYCFAKIHQKECIGKEEGRLTHLWLIILVFLFMLYGLYTWGV
Ga0075435_1000058224	3300007076	Populus Rhizosphere	LPFFQAMASVLIANVLTVTFVYCFAKIHQKECIGKEEGRLTHLWLIILVFLFMLYGLYTWSV*
Ga0105091_102698131	3300009146	Freshwater Sediment	MVVQQISGTVDFFKAMSPILFANLLTVTFIYCFGKITQLEQKGEEEGRLTYLWLLVLVFVFMFYGLYVWGLYPFKK*
Ga0114129_113356322	3300009147	Populus Rhizosphere	MASVLIANVLTVTFVYCFAKIHQKECIGEEEGRLTHLWLIILVFLFMLYGLYTWNV*
Ga0111538_131248111	3300009156	Populus Rhizosphere	MVVQQISGTAAFFKAMAPLLVANILTVTFVYCFAKISQLEQNREEEGKLTYLWLLLLVLLFMMYGLSGYAVYVWKKLKGKPVS
Ga0075423_101125531	3300009162	Populus Rhizosphere	MASVLIANVLTVTFVYYFAKIHQKECIGKEEGRLTHLWLIILVFLFMLYWLYTWSV*
Ga0105101_106188361	3300009171	Freshwater Sediment	MVVQQISGTVAFFKAMAPVLIANVLTVTFVYCFGKVSQLEQRGEEEGKLTYLWLLILVFLFMLYGL
Ga0105248_100062721	3300009177	Switchgrass Rhizosphere	MASVLIANVLTVTFVYCFAKIHQKECIGKEEGRLTHLWLIILVFLFMLYGLYTWGV*
Ga0116222_10854342	3300009521	Peatlands Soil	MSGTETFFHAMAPVLIANVLTVTFVYAFVKITQKERIGEDGRGTYLWLIVLVFLFMLYGLYT*
Ga0105249_106946521	3300009553	Switchgrass Rhizosphere	MERLDGTVAFFQAMAPVLIANVLTVTFVYCFAKSHQKECIGEEEGRLTHLWLIILVFLFMLYGLYTWG
Ga0105249_120085442	3300009553	Switchgrass Rhizosphere	MAPILIANVLTVTFVYCFAKIHQKELTGEEEGRLTYLWLIIMVCVFMLYGLYTWGVYPL*
Ga0116224_101774281	3300009683	Peatlands Soil	TFFHAMAPVLIANVLTVTFVYAFVKITQKERIGEDGRGTYLWLIVLVFLFMLYGLYT*
Ga0105068_10920602	3300009836	Groundwater Sand	MAPLLIANVLTVAFVYAFSKIHQKELTGEEGGRLTYLWLIILVFLFMLYGLYTWGVYPYKQ*
Ga0116223_101096282	3300009839	Peatlands Soil	MSGTETFFHAMAPVLIANVLTVTFVYAFVKITQKERIGEDGRGIYLWLIVLVFLFMLYGLYT*
Ga0126380_100623511	3300010043	Tropical Forest Soil	MEHLNGTAAFFQALAPVLIGNVLTVTFVYCFAKIHQKERIREEEGRLTYLWLIVLVFLFILYGLYAWGVDPVSHRGL
Ga0126382_108865191	3300010047	Tropical Forest Soil	MEHLNGTAAFFQALAPVLIGNVLTVTFVYCFAKNPPLWLIVLVLLFMLYGLYAWGVDPVSHRGL*
Ga0134126_114329072	3300010396	Terrestrial Soil	MSGTESFFHALAPALTANVLTVVFVYCFSVIDRQEQTGKEEGRLTYLWLIVMVLLFMLYGLYTWGVYPFKK*
Ga0134123_102322091	3300010403	Terrestrial Soil	MASVLIANVLTVTFVYCFAKIHQKECIGKEEGRLTHLWLIILVFLFMLYGLYT
Ga0105246_107784701	3300011119	Miscanthus Rhizosphere	MAPILIANVLTVTFVYCFAKIHQKELTGEEEGRLTYLWLIILVLLFMLY
Ga0120156_10844841	3300011996	Permafrost	MSGTVLFFRATAPVLTSNILTVTWVYAFVKITQKERGGEEEGRGTWLWLIVMVFLFVLYGLYTWGVYPFRR*
Ga0157284_102808091	3300012893	Soil	ASVLIANVLTVTFVYCFAKIHQKECIGEEEGRLTHLWLIILVFLFMLYGLYTWGV*
Ga0157292_100532042	3300012900	Soil	MERVDGTVAFFQAMAPVLIANVLTVTFVYCFAKIHQKECIGKEEGRLTHLWLIILVFLFMLYGLYTWGV*
Ga0157306_100125523	3300012912	Soil	MASVLIANVLTVTFVYCFAKIHQKECIGEEEGRLTYLWLIILVFLFMLYGLYTWGV*
Ga0164298_112583851	3300012955	Soil	MAPALTANVLTVMLVYCFAKITQKEMKGDEEGGLAYRWLIVLVFLFMLYGLYVWGVYPFKK*
Ga0164299_108272711	3300012958	Soil	MVAHASGTVAIAPVLIANVSTVAFVYCFAKIHQKELVGEEEGRLPYLIIMVFLFMLYGLYTWGVYPFKN*
Ga0164299_109005251	3300012958	Soil	MLEHATGTVSFFQTMAPVLIANVLTVTFVYCFAKINQKELAGEKDGRLTYLWLIILVLLFMLYGLYAWGVYPFKR*
Ga0164301_115776501	3300012960	Soil	MASVLIANVLTVTFVYCFAKIHQKECIGEEEGRLTHLWLIILVF
Ga0164302_100190561	3300012961	Soil	LVLTANVLTVTFGFAKIHQKALKGEEDAHLTYLWLIVLVFLFVLYGFSAWRRTNFEC*
Ga0164302_101514181	3300012961	Soil	MLEHATGTVSFFQAMAPLLIANVLTVTLVYCFAKIHQKELAGEEEGRLTYLWLIILILLFMLYGLYAWRVYPFER*
Ga0164302_101656271	3300012961	Soil	MLEHATGTVSFFQTMAPVLIANVLTVTFVYCFAKIHQKELAGEKEGRLTYLWLIILVLLFMLYGLYAWGVYPFKR*
Ga0164309_111929652	3300012984	Soil	MLEHATGTVSFLQTMAPVLIANVLAVTFVYCFAKIHQKELAGEKEGRLTYLWLIILVLLFMLYGLY
Ga0164304_100343853	3300012986	Soil	MLEHATGTVSFLQTMAPVLIANVLAVTFVYCFAKIHQKELAGEEEGRLTYLWLIILILLFMLYGLYAWGVYPFKR*
Ga0164307_114189451	3300012987	Soil	QAMASVLIANVLTVTFVYCFAKIHQKECIGKEEGRLTHLWLIILVFLFMLYGLYTWGV*
Ga0157374_117664811	3300013296	Miscanthus Rhizosphere	MASVLIANVLTVTFVYCFAKIHQKECIGEEEGRLTHLWLIILVFLFMLYG
Ga0157375_100447351	3300013308	Miscanthus Rhizosphere	SLWNASTEQLPFFQAMASVLIANVLTVTFVYCFAKIHQKECIGKEEGRLTHLWLIILVFLFMLYGLYTWSV*
Ga0120111_10216082	3300013764	Permafrost	MAPVLTSNILTVTWVYAFVKITQKERGGEEEGRGTWLWLIVMVFLFMLYGLYTWGVYPFRR*
Ga0120123_10323372	3300013770	Permafrost	GESMSGTVLFFHAMAPVLTSNILTVTWVYAFVKITQKERGGEEEGRGTWLWLIVMVFLFMLYGLYTWGVYPFRR*
Ga0120125_10209031	3300014056	Permafrost	GESMSGTVLFFRATAPVLTSNILTVTWVYAFVKITQKERGGEEEGRGTWLWLIVMVFLFMLYGLYTWGVYPFRR*
Ga0120170_10146624	3300014823	Permafrost	MSGTVLFFHAMAPVLTSNILTVTWVYAFVKITQKERGGEEEEGRGTWLWLIVMVFLFMLYGLYTWGVYPFRR*
Ga0157376_127945022	3300014969	Miscanthus Rhizosphere	LTFFQAMASVLIANVLTVTFVYCFAKIHQKECIGKEEGRLTHLWLIILVFLFMLYGLYTWSV*
Ga0173483_100254834	3300015077	Soil	MASVLIANVLTVTFVYCFAKIHQKECIGEEDGRLTHLWLIILVFLFMLYGLYTWGV*
Ga0163161_100038142	3300017792	Switchgrass Rhizosphere	LPFFQAMASVLIANVLTVTFVYCFAKIHQKECIGKEEGRLTHLWLIILVFLFMLYGLYTWGV
Ga0163161_115853791	3300017792	Switchgrass Rhizosphere	MPPFAPIANHTVAFFHAMAPVLIANVSTVAFVFCFTKIHQKELAGEEEGRLTYLWLIIMVFLFMLYGLYTWSVYPFKK
Ga0184608_102139561	3300018028	Groundwater Sediment	MVQNISGTVAFFNAMAPVLIANVLTVTFVYCFAKISQLEERGEEGGRLTYLWLLVLIFLIMLYGLYVWGVGPLKK
Ga0184638_11374792	3300018052	Groundwater Sediment	MSGTASFFHALAPVLVANILTVAFVYAFAKIHQKERSGEEEGRGTYLWLIVLVFLFMLYGLHTWGVYPLKNLR
Ga0184609_100271923	3300018076	Groundwater Sediment	MSGTASFFHALAPVLVANILTVAFVYAFAKIHQKERSGEEEERGTYLWLIVLVFLFMLYGLHTWGVYPLKNLR
Ga0184612_103924452	3300018078	Groundwater Sediment	MLEHAAGTVSFFQAMAPVLIANVLTVAFVYAFAKIHQKELTGEEEGRLTYLWLIILVSLFMLYGLYTWGVYPFKQ
Ga0184612_104072302	3300018078	Groundwater Sediment	MSGTASFFHAMAPVLIANVLTVAFVDAFAKIHQKERSGKEEGRSTYLWLIVLVFFALRAPHLGRLPR
Ga0184612_105454392	3300018078	Groundwater Sediment	MAPVLTANVLTVTFVYCFVKIAQKELKGEEGGRLTYLWLITMVFLFMLYGLYIWGVDPFK
Ga0163153_100500871	3300020186	Freshwater Microbial Mat	VLESVSGTVAFFKAMAPVLTANLLTVTFVYCIAKYSQKELRGEEEGQLTYLWLIVVVLLFVLYGFYVWGLYPLKK
Ga0247753_10608471	3300022892	Soil	TEQLPFFQAMASVLIANVLTVTFVYCFAKIHQKECIGEEEGRLTHLWLIILVFLFMLYGLYTWGV
Ga0247799_10368772	3300023072	Soil	MASVLIANVLTVTFVYCFAKIHQKECIGEEEGRLTHLWLIILVFLFMLYGLYTWGV
Ga0207697_103415952	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MERVDGTVAFFQAMAPVLIANVLTVTFVYCFAKIHQKECIGEEEGRLTHLWLIILVFLFMLYGLYTWGV
Ga0209751_109065351	3300025327	Soil	MSGTAAFFHAMAPTLIANVLTVAFVYCFAVINKQERSGEEEGRLTYLWLLVMVFMFMLYGLYTWGV
Ga0207710_103979662	3300025900	Switchgrass Rhizosphere	MLEHATGTVSFLQTMAPVLIANVLAVTFVYCFAKIHQKELAGEKEGRLTYLWLIILVLLFMLYGLYAWGVYPFKR
Ga0207680_102427112	3300025903	Switchgrass Rhizosphere	MASVLIANVLTVTFVYCFAKIHQKECIGEEEGRLAHLWLIILVFLFMLYGLYTWGV
Ga0207685_102038751	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	VNHWRSRCQSQVLGTEPMERVDGPFFQAMASVLIANVLTVTFVYCFAKIQQKECIGEEEGRLTHLWLIILVFLFMLYGLYTWGV
Ga0207657_100148126	3300025919	Corn Rhizosphere	LPFFQAMASVLIANVLTVTFVYCFAKIHQKECIGEEEGRLTHLWLIILVFLFMLYGLYTWSV
Ga0207711_110913622	3300025941	Switchgrass Rhizosphere	TMAPVLIANVLAVTFVYCFAKIHQKELAGEKEGRLTYLWLIILVLLFMLYGLYAWGVYPFKR
Ga0207689_101160894	3300025942	Miscanthus Rhizosphere	MERVDGTVAFFQAMAPVLIANVLTVTFVYCFAKIHQKECIGKEEGRLTHLWLIILVFLFMLYGLCTWGV
Ga0207668_105111482	3300025972	Switchgrass Rhizosphere	MAPLLTANVLTVTFVYCFVNLTQKELKGEEVGRLTYLWLIIMLFLFMLYGLYIWGVDPFK
Ga0207658_100444831	3300025986	Switchgrass Rhizosphere	EQLPFFQAMASVLIANVLTVTFVYCFAKIHQKECIGEEEGRLTHLWLIILVFLFMLYGLYTWGV
Ga0207677_118525481	3300026023	Miscanthus Rhizosphere	VALLPGQASVLIANVLTVTFVYCFAKIHQKECIGKEEGRLTHLWLIILVFLFMLYGLYTWGV
Ga0207639_100497974	3300026041	Corn Rhizosphere	MERLDGTVAFFQAMAPVLIANVLTVTFVYCFAKIHQKECIGEEEGRLTHLWLIILVFLFMLYGLYTWGV
Ga0207648_121310921	3300026089	Miscanthus Rhizosphere	LEHATGTVPSFYTMAPILIANVLTVTFVYCFAKIHQKELTGEEEGRLTYLWLIIMVCVFMLYGLYTWGVYPL
Ga0207675_1009450422	3300026118	Switchgrass Rhizosphere	MAPVLVANILTVTFVYCFAEISQLEQNREEEGKLTYLWLLLLVLLFMMYGMYVWDVG
Ga0209887_10453113	3300027561	Groundwater Sand	MIVHATGTVAFFHAMAPVLIANVLTVAFVYCFAKIHQKELAGEEEGRLTYLWLIVLVLLFMLYGLYTWGVYPLKY
Ga0209887_10564152	3300027561	Groundwater Sand	MSGTAAFFHAMAPTLIANVLTVAFVYCFAVINKQERSGEEEGRLTYLWLLVMVFMFMLYGLYTWGVYPLDK
Ga0208043_12022252	3300027570	Peatlands Soil	MSGTETFFHAMAPVLIANVLTVTFVYAFVKITQKERIGEDGRGTYLWLIVLVFLFMLYGLYT
Ga0209874_10598522	3300027577	Groundwater Sand	MSGTAAFFHAMAPTLIANVLTVAFVYCFAVINKQERSGEEEGRLTYLWLLVMVFMFMLYGLYTWGVY
Ga0209382_101540561	3300027909	Populus Rhizosphere	MASVLIANVLTVTFVYCFAKIHQKECIGKEEGRLTHLWLIILVFLFMLYGLYTWSV
Ga0209382_105918882	3300027909	Populus Rhizosphere	MVVQQISGTAAFFKAMAPLLVANILTVTFVYCFAKISQLEQNREEEGKLTYLWLLLLVLLFMMYGMYVWDVG
Ga0247822_104720932	3300028592	Soil	VLTVTFVYCFVKLTQKELKGEEVGRLTYLWLIIMVFLFMLYGLYIWGVDPFKK
Ga0247821_109401452	3300028596	Soil	VLTANVLTVTFVYCFVKLTQKELKGEEVGRLTYLWLIIMVFLFMLYGLYIWGVDPFKK
Ga0299913_106027402	3300031229	Soil	MSEHPSFFHALAPVLVANILTVVFVYSFAKISQKERSGEEEGRLTYMWLILLVLLMMLYGIYLWGVHPFEK
Ga0307442_10472492	3300031274	Salt Marsh	MLEQTNGTVAFFRAMAPILTANILTVTFVYCFVRIHQQEVSGRDEGRLTYLWLIVLVILFMLYGLYIWGVYPLKK
Ga0307426_11289602	3300031359	Salt Marsh	MGGTKAFFQALAPYLTANVLTVTLVYCFAKIDQRERAGEEGRLTHLWLIVLVLLFMLYG
Ga0307445_103243051	3300031364	Salt Marsh	MPEPISGTVAFFKAMAPVLTANVLTVTCVYCFARISQKELKGEEEGRLTYLWLIVLVFLFMLYGLYVWGVYPLKH
Ga0170818_1112428311	3300031474	Forest Soil	MLEHATSTVSFFQAMAPLLIANVLTVTFVYCFAKIHQKELAGEEEGRLTYLWLIILILLFMLYGLFAWGVYPFER
Ga0307419_103286051	3300031537	Salt Marsh	ARIAHRKSLKASRGDPIMGGTKAFFQALAPYLTANVLTVTLVYCFAKIDQRERAGEEGRLTHLWLIVLVLLFMLYGWYTWGVYPLRH
Ga0307380_100938673	3300031539	Soil	MSGTASFFHVLAPVLVANVLTVTFVYAFVKIAQKERSGEEEGRGTYLWLLVLIFFFMLYGLYTWDIYPLN
Ga0307380_101141932	3300031539	Soil	MIVQQISGTVAFFKAMTPILIANILTVTFVYCFAKISQLELKGEEEGRLTYLWLLILVFLFMLYGLYVWGVGPLNK
Ga0307380_102575792	3300031539	Soil	VTGNASFFNAMAPGLVANILTVVFVYSFVKISQKERSGEEEGRGTYLWLILLVFFFMLYGIYTWGI
Ga0307379_106586001	3300031565	Soil	VSGNASFFNALAPDLVANILTVVFVYSFVEISQKERSGDEDGRGTYFWLILLVLLFMLYGIYTWGI
Ga0307378_100604171	3300031566	Soil	MSGTASFFHVLAPVLVANVLTVTFVYAFVKIAQKERSGEEEGRGTYLWLLVLIFFFMLYGLYTWDIYPLNDKHQNSTSVRPKSS
Ga0307378_102166471	3300031566	Soil	MIVQQISGTVAFFKAMTPILIANILTVTFVYCFAKISQLELKGEEEGRLTYLWLLILVFLFMLYGLYV
Ga0315553_103174851	3300031652	Salt Marsh Sediment	MSGTKAFFQALAPYLTANVLTVTLVYCFAKVDQRERAGEEGRLTHLWLIVLVLLFMLYGWYTWGVYPLKH
Ga0307469_108843872	3300031720	Hardwood Forest Soil	MAPVLTANVLTVTFVYCFVKIAQKELKGEEEGRLTYLWLITMVFLFMLYGLYIWGVDPFK
Ga0307473_111300541	3300031820	Hardwood Forest Soil	MAPVLTANVLTVTFVYCFVKLTQKELKGEEVGRLTYLWLIIMVFLFMLYGLYIWGVDPFK
Ga0315297_103535122	3300031873	Sediment	MSGTESFFHAMAPVLVGNVLTVTFVYAFVRITQKEQVGEEEGRGTYLWLIILVNFFMLYGLYT
Ga0315297_105321772	3300031873	Sediment	MLEHVSGTGSFFQAMAPVLIANVLTVAFVYSFAKIAQKELRGEKEGRLTYLWLIVLVFLFMLYGLYTWGVYPLEH
Ga0214473_112217542	3300031949	Soil	MSGTASFFHTLAPTLLANLLTVVFVWAFARISQQERYGIEEGRGTYLWLIVLVFLFMCYGLYTWGLRT
Ga0310890_107690672	3300032075	Soil	MVVQQISGTVDFFKAMAPLLVANILTVTFVYCFAKISQLEKNREEKGKLTYLWLLILVFLFMLYALYVWGIGPLSKMKDGI
Ga0315295_104786171	3300032156	Sediment	MSGTESFFHAMAPVLVGNMLTVTFVYAFVRITQKEQVGEEEGRGTYLWLIILVNFFMLYGLYT
Ga0307471_1006696262	3300032180	Hardwood Forest Soil	MAPVLTANVLTVTFVYCFEKIAQKELKGEEEGRLTYLWLITMVFLFMLYGLYIWGVDPFK
Ga0307472_1002639083	3300032205	Hardwood Forest Soil	VQQVGGTEAFCKEMAPVLTANVLTVTFVYCFVKLTQKELKGEEVGRLTYLWLIIMVFLFMLYGLYIWGVDPFKK
Ga0307472_1020591922	3300032205	Hardwood Forest Soil	ANHRTEAMVEHASGTVAFCHAMAPVLIANVSTVAFVYCFAKIHQKELVGEEEGRLPYLWLIIMVFLFMLYGLYTWGVYPFKK
Ga0247829_104136022	3300033550	Soil	VQQVGGTGAFCKEIAPVLTANVLTVTFVYCFVKLTQKELKGEEVGRLTYLWLIIMVFLFMLYGLYIWGVDPFKK
Ga0247830_103289762	3300033551	Soil	MAPILIANVLTVTFVYCFAKIHQKELTGEEEGRLTYLWLIIMVCVFMLYGLYTWGVYPL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F069127

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences