Metagenome / Metatranscriptome Family F069126

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F069126
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	77 residues
Representative Sequence	MTKDEEIEGIALAALQLSQYLFMHLVDRNIIDPTEANQWLEQGIKLNSQGTEPHKKAAEIFELLRQGLRRPGTTPSSL
Number of Associated Samples	103
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	89.52 %
% of genes near scaffold ends (potentially truncated)	20.16 %
% of genes from short scaffolds (< 2000 bps)	97.58 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (54.839 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (30.645 % of family members)
Environment Ontology (ENVO)	Unclassified (41.129 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (62.097 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 70.51% β-sheet: 0.00% Coil/Unstructured: 29.49%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF08857	ParBc_2	12.10
PF02586	SRAP	4.84
PF01381	HTH_3	1.61
PF00072	Response_reg	0.81
PF13676	TIR_2	0.81
PF04392	ABC_sub_bind	0.81
PF07750	GcrA	0.81
PF02743	dCache_1	0.81
PF13852	DUF4197	0.81
PF01844	HNH	0.81
PF09361	Phasin_2	0.81
PF02518	HATPase_c	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG4318	Uncharacterized conserved protein	Function unknown [S]	12.10
COG2135	ssDNA abasic site-binding protein YedK/HMCES, SRAP family	Replication, recombination and repair [L]	4.84
COG2972	Sensor histidine kinase YesM	Signal transduction mechanisms [T]	0.81
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.81
COG5352	Uncharacterized conserved protein	Function unknown [S]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.84 %
Unclassified	root	N/A	45.16 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.84 %
Unclassified	root	N/A	45.16 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.84 %
Unclassified	root	N/A	45.16 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.16 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	43.55 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.16 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	41.94 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.16 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	40.32 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.16 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	36.29 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	3.23 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.16 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	25.00 %
Rhizobiales bacterium 62-47	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 62-47	3.23 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.16 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	4.84 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	4.03 %
Rhizobiales bacterium 62-47	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 62-47	3.23 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.61 %
Bradyrhizobium brasilense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium brasilense	0.81 %
Bradyrhizobium liaoningense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	0.81 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.16 %
Bradyrhizobium japonicum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	4.84 %
Rhizobiales bacterium 62-47	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 62-47	3.23 %
Bradyrhizobium sp. URHD0069	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	2.42 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1.61 %
Bradyrhizobium sp. 200	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 200	0.81 %
Bradyrhizobium sp. 41S5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 41S5	0.81 %
Bradyrhizobium brasilense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium brasilense	0.81 %
Bradyrhizobium liaoningense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	0.81 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2199352025\|deepsgr__Contig_157537	Not Available	557	Open in IMG/M
3300000956\|JGI10216J12902_103201460	Not Available	945	Open in IMG/M
3300004479\|Ga0062595_101389855	Not Available	639	Open in IMG/M
3300005093\|Ga0062594_102869512	Not Available	536	Open in IMG/M
3300005093\|Ga0062594_102970555	Not Available	529	Open in IMG/M
3300005330\|Ga0070690_100846634	Not Available	712	Open in IMG/M
3300005335\|Ga0070666_11153430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	577	Open in IMG/M
3300005337\|Ga0070682_100463341	Not Available	973	Open in IMG/M
3300005343\|Ga0070687_100145044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1387	Open in IMG/M
3300005344\|Ga0070661_100829334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	760	Open in IMG/M
3300005347\|Ga0070668_100467237	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1087	Open in IMG/M
3300005355\|Ga0070671_100148653	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 200	1978	Open in IMG/M
3300005364\|Ga0070673_100513648	Not Available	1085	Open in IMG/M
3300005366\|Ga0070659_101459766	Not Available	609	Open in IMG/M
3300005437\|Ga0070710_11071853	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	590	Open in IMG/M
3300005457\|Ga0070662_101304879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	625	Open in IMG/M
3300005459\|Ga0068867_100199231	All Organisms → cellular organisms → Bacteria → Proteobacteria	1602	Open in IMG/M
3300005459\|Ga0068867_102380927	Not Available	504	Open in IMG/M
3300005539\|Ga0068853_102137737	Not Available	543	Open in IMG/M
3300005543\|Ga0070672_100516133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 62-47	1035	Open in IMG/M
3300005547\|Ga0070693_100481520	Not Available	877	Open in IMG/M
3300005564\|Ga0070664_100042631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3830	Open in IMG/M
3300005615\|Ga0070702_100498293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	894	Open in IMG/M
3300005718\|Ga0068866_10751277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	674	Open in IMG/M
3300005719\|Ga0068861_102291860	Not Available	542	Open in IMG/M
3300005834\|Ga0068851_10186568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 62-47	1151	Open in IMG/M
3300005840\|Ga0068870_10321930	Not Available	983	Open in IMG/M
3300005841\|Ga0068863_102087877	Not Available	577	Open in IMG/M
3300006175\|Ga0070712_101709723	Not Available	551	Open in IMG/M
3300006237\|Ga0097621_100551005	Not Available	1050	Open in IMG/M
3300006578\|Ga0074059_11991154	Not Available	557	Open in IMG/M
3300006881\|Ga0068865_100156965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1731	Open in IMG/M
3300009094\|Ga0111539_12362615	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300009148\|Ga0105243_11304711	Not Available	743	Open in IMG/M
3300009168\|Ga0105104_10846321	Not Available	533	Open in IMG/M
3300009177\|Ga0105248_10557969	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	1292	Open in IMG/M
3300009551\|Ga0105238_11093995	All Organisms → cellular organisms → Bacteria	820	Open in IMG/M
3300010371\|Ga0134125_11009945	Not Available	912	Open in IMG/M
3300010371\|Ga0134125_12998541	Not Available	512	Open in IMG/M
3300010373\|Ga0134128_12487880	Not Available	570	Open in IMG/M
3300010397\|Ga0134124_13172165	Not Available	503	Open in IMG/M
3300010403\|Ga0134123_11072884	Not Available	827	Open in IMG/M
3300012685\|Ga0137397_10853628	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	675	Open in IMG/M
3300012892\|Ga0157294_10188950	Not Available	599	Open in IMG/M
3300012903\|Ga0157289_10245330	Not Available	607	Open in IMG/M
3300012907\|Ga0157283_10241571	Not Available	594	Open in IMG/M
3300012909\|Ga0157290_10265156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	617	Open in IMG/M
3300012911\|Ga0157301_10367651	Not Available	547	Open in IMG/M
3300012912\|Ga0157306_10241520	Not Available	632	Open in IMG/M
3300012913\|Ga0157298_10161327	Not Available	682	Open in IMG/M
3300012916\|Ga0157310_10547236	Not Available	513	Open in IMG/M
3300012951\|Ga0164300_10798156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	585	Open in IMG/M
3300012957\|Ga0164303_10249939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1016	Open in IMG/M
3300012957\|Ga0164303_10362075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	881	Open in IMG/M
3300012958\|Ga0164299_11643516	Not Available	508	Open in IMG/M
3300012961\|Ga0164302_10208405	Not Available	1209	Open in IMG/M
3300012961\|Ga0164302_11206842	All Organisms → cellular organisms → Bacteria	605	Open in IMG/M
3300012985\|Ga0164308_10424818	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1093	Open in IMG/M
3300012985\|Ga0164308_11466022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium liaoningense	625	Open in IMG/M
3300012987\|Ga0164307_10977199	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	687	Open in IMG/M
3300012988\|Ga0164306_10213071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1363	Open in IMG/M
3300013306\|Ga0163162_12036074	Not Available	658	Open in IMG/M
3300014326\|Ga0157380_13328186	Not Available	514	Open in IMG/M
3300014326\|Ga0157380_13416235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	508	Open in IMG/M
3300015200\|Ga0173480_10495153	Not Available	730	Open in IMG/M
3300015201\|Ga0173478_10579180	Not Available	578	Open in IMG/M
3300015371\|Ga0132258_12335691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 62-47	1341	Open in IMG/M
3300015372\|Ga0132256_103022439	Not Available	565	Open in IMG/M
3300015374\|Ga0132255_100852322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Rhizobiales bacterium 62-47	1360	Open in IMG/M
3300017792\|Ga0163161_10655737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	870	Open in IMG/M
3300017792\|Ga0163161_12082054	Not Available	505	Open in IMG/M
3300017965\|Ga0190266_10683435	Not Available	638	Open in IMG/M
3300018067\|Ga0184611_1089394	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 41S5	1062	Open in IMG/M
3300018067\|Ga0184611_1244131	Not Available	636	Open in IMG/M
3300018469\|Ga0190270_10741467	Not Available	980	Open in IMG/M
3300018469\|Ga0190270_11834311	Not Available	662	Open in IMG/M
3300018469\|Ga0190270_12045489	All Organisms → cellular organisms → Bacteria	631	Open in IMG/M
3300018469\|Ga0190270_12664854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	562	Open in IMG/M
3300018476\|Ga0190274_10250025	Not Available	1606	Open in IMG/M
3300018476\|Ga0190274_12491508	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300018476\|Ga0190274_13587879	Not Available	524	Open in IMG/M
3300018481\|Ga0190271_10013432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5979	Open in IMG/M
3300018481\|Ga0190271_10625466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1197	Open in IMG/M
3300018481\|Ga0190271_11823913	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	720	Open in IMG/M
3300018481\|Ga0190271_12746485	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300018481\|Ga0190271_12957294	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300019356\|Ga0173481_10669266	Not Available	556	Open in IMG/M
3300019361\|Ga0173482_10157700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	891	Open in IMG/M
3300019362\|Ga0173479_10174227	Not Available	883	Open in IMG/M
3300021082\|Ga0210380_10398457	Not Available	630	Open in IMG/M
3300022893\|Ga0247787_1073781	Not Available	524	Open in IMG/M
3300025315\|Ga0207697_10079469	All Organisms → cellular organisms → Bacteria	1381	Open in IMG/M
3300025903\|Ga0207680_10892000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	637	Open in IMG/M
3300025907\|Ga0207645_10470919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	849	Open in IMG/M
3300025908\|Ga0207643_10146233	All Organisms → cellular organisms → Bacteria → Proteobacteria	1414	Open in IMG/M
3300025909\|Ga0207705_11301632	Not Available	555	Open in IMG/M
3300025915\|Ga0207693_10822552	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300025920\|Ga0207649_10791418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	740	Open in IMG/M
3300025926\|Ga0207659_10873956	All Organisms → cellular organisms → Bacteria	773	Open in IMG/M
3300025926\|Ga0207659_11173948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	660	Open in IMG/M
3300025927\|Ga0207687_10012250	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5608	Open in IMG/M
3300025933\|Ga0207706_10384944	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1217	Open in IMG/M
3300025933\|Ga0207706_10732500	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	843	Open in IMG/M
3300025935\|Ga0207709_10459490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	986	Open in IMG/M
3300025936\|Ga0207670_11876696	Not Available	510	Open in IMG/M
3300025937\|Ga0207669_10323528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1181	Open in IMG/M
3300025938\|Ga0207704_10849135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	765	Open in IMG/M
3300025940\|Ga0207691_10581395	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	949	Open in IMG/M
3300025942\|Ga0207689_10735066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. URHD0069	833	Open in IMG/M
3300025945\|Ga0207679_10268562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum	1458	Open in IMG/M
3300025981\|Ga0207640_11163201	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	685	Open in IMG/M
3300026075\|Ga0207708_11388515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	616	Open in IMG/M
3300026088\|Ga0207641_11594846	All Organisms → cellular organisms → Bacteria	655	Open in IMG/M
3300026121\|Ga0207683_10323707	All Organisms → cellular organisms → Bacteria	1412	Open in IMG/M
3300026121\|Ga0207683_10980960	Not Available	784	Open in IMG/M
3300028381\|Ga0268264_12358551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	538	Open in IMG/M
3300028810\|Ga0307294_10093895	Not Available	941	Open in IMG/M
3300031057\|Ga0170834_106134630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1200	Open in IMG/M
3300031099\|Ga0308181_1085366	Not Available	660	Open in IMG/M
3300031122\|Ga0170822_14242072	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium brasilense	950	Open in IMG/M
3300031469\|Ga0170819_16695988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	551	Open in IMG/M
3300031474\|Ga0170818_102625859	Not Available	569	Open in IMG/M
3300031740\|Ga0307468_101697267	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	594	Open in IMG/M
3300031908\|Ga0310900_11598146	All Organisms → cellular organisms → Bacteria	552	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	57.26%
Host-Associated	Host-Associated	42.74%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.03%
Plants	Host-Associated → Plants	42.74%
Aquatic	Environmental → Aquatic	3.23%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.03%
Rhizosphere	Host-Associated → Plants → Rhizosphere	23.39%
Rhizoplane	Host-Associated → Plants → Rhizoplane	18.55%
Freshwater	Environmental → Aquatic → Freshwater	1.61%
Sediment	Environmental → Aquatic → Sediment	1.61%
Roots	Host-Associated → Plants → Roots	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.97%
Soil	Host-Associated → Plants → Rhizosphere → Soil	16.94%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	15.32%
Loam	Environmental → Terrestrial → Soil → Loam	8.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	6.45%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.61%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.61%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	16.94%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	15.32%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	6.45%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.03%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.23%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.61%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.81%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.81%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	30.65%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	7.26%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	6.45%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.84%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.84%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.03%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.03%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	3.23%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.42%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.42%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.61%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.61%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.81%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.81%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.81%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.81%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.81%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006578	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009551	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300022893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S126-311R-4	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028810	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_151	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031099	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_152 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031474	Fir Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
deepsgr_02605910	2199352025	Soil	MTKDEEIEGIAIAALQLSEYLFMHLVDRNVIDPTEANQWLEQGIKLNSQGTEPHKKAAEIFELLRQGLRRPGTTP
JGI10216J12902_1032014601	3300000956	Soil	MTKDEEIEGIALAALQLSQYLFMHLVDRNIIDPAEANQWLERGIKSNSEGTEPHKKVAEFFELLRQGLGRPGTTPSSL*
Ga0062595_1013898551	3300004479	Soil	MTKDEEIEEFAVAALQLSQYLFMHLVDRNIIDPTEANQWLEQGIKLNSQGTEPHKKAAEIFELLREGLRRPGTTPSSL*
Ga0062594_1028695121	3300005093	Soil	MTKDEEIEGIALAALQLSKYLFMHFLDRNIIDPTEANEWLEQEIKLNSQGTEPHKRAAEIFELLRQGLRRPGTTPPSL*
Ga0062594_1029705551	3300005093	Soil	MTNDEEMEGIALAALQLSKYLFLRLLDRNIIDPTEANQWLEQEIKLNSQGTEPHKRAAEIFEVLRQGLRRPMTTPPSL*
Ga0070690_1008466341	3300005330	Switchgrass Rhizosphere	MTKDEEIEGIATAAVQLSQYLFMHLVDRDIIDPTEANQWLEQGIKLNSQGTEPHKRAAEIFELLRQGLRRPGTTPPSL*
Ga0070666_111534302	3300005335	Switchgrass Rhizosphere	MTKDEEIEGIATAAVQLSQYLFMHLVDRDIIDPTEANRWLEQGIKLNSQGTEPHKRAAEILELLRQGLRRSGTTPSSL*
Ga0070682_1004633412	3300005337	Corn Rhizosphere	IEGIAIAALQLSEYLFIHLVDRNVIDPTEANQWLEQGIKLNSQGTEPHKKAAEIFELLREGLRRPGTTPSSL*
Ga0070687_1001450444	3300005343	Switchgrass Rhizosphere	MTRDEEIEGIALAALQLSKYLFLHFLDRNIIDPTEANQWLEQGIKLNSQGTEPHKRAAEILELLRQGLRRSGTTPSSL*
Ga0070661_1008293341	3300005344	Corn Rhizosphere	MTKDEEIEEFAVAALQLSQYLFMHLVDRNIIDPTEANQWLEQGIKLNSQGTEPHKRAAEILELLRQGLRRSGTTPSSL*
Ga0070668_1004672371	3300005347	Switchgrass Rhizosphere	EEIEGIATAAVQLSQYLFMHLVDRDIIDPTEANQWLEQGIKLNSQGTEPHKRAAEILELLRQGLRRSGTTPSSL*
Ga0070671_1001486534	3300005355	Switchgrass Rhizosphere	MTRNEEIEGIALTALQLSQYLFMHLVDRKIIDPTDAKQWLEQGIKLNSQGAEPQKKAAEIFELLRQGLGRPATTPSSL*
Ga0070673_1005136481	3300005364	Switchgrass Rhizosphere	MTRDEEIEGIAIAALQLSEYLFIHLVDRNVIDPTEANQWLEQGIKLNSQGTEPHKKAAEIFELLREGLRRPGTTPSSL*
Ga0070659_1014597661	3300005366	Corn Rhizosphere	MTKDEEIEGIAIAALQLSEYLFIHLVDRNVIDPTEANQWLEQGIKLNSQGTEPHKKAAEIFELLREGLRRPGTTPSSL*
Ga0070710_110718531	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MTKDEEIEEFAVAALQLSQYLFMHLVDRNIIDPTEANQWLEQGIKLNSQGTEPHKKAAEIFELL
Ga0070662_1013048791	3300005457	Corn Rhizosphere	MTKDEEIEGIATAAVQLSQYLFMHLVDRDIIDPTEANQWLEQGIKLNSQGTEPHKRAAEILELLRQGLRRSGTTPSSL*
Ga0068867_1001992312	3300005459	Miscanthus Rhizosphere	MTKDEEIEGIATAAVQLSQYLFMHLVDRDIIDPTEANQWLEQGIKLNSQGTEPHKKAAEIFELLREGLRRPGTTPSSL*
Ga0068867_1023809271	3300005459	Miscanthus Rhizosphere	MTKDEEIEGIALAALQLSQYLFMHLVDRNIIDPTEANQWLEQGIKSNSKGTEPHKKAVEFFELLRQGMGRPGTTPSSL*
Ga0068853_1021377372	3300005539	Corn Rhizosphere	MTMDEEIEGIAIAALQLSEYLFIHLVDRNVIDPTEANQWLEQGIKLNSQGTEPHKKAAEIFEFLRQGLRSSGEAPSSL*
Ga0070672_1005161331	3300005543	Miscanthus Rhizosphere	MTKDEEIEEFAVAALQLSQYLFMHLVDRNIIDPTEANEWLEQETKLNSQGTEPHKRAAEIFELLRQGLRRPGTTPPSL*
Ga0070693_1004815202	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MTKDEEIEEFAVAALQLSQYLFMHLVDRNIIDPTEANQWLEQGIKLNSQGTEPHKKAAEIFELLRQGLRRPGTTPSSL*
Ga0070664_1000426312	3300005564	Corn Rhizosphere	MTKDEEIEEFAVAALQLSQYLFMHLVDRNIIDPTEANRWLEQGIKLNSQGTEPHKKAAEIFELLRQGLRRPGTTPSSL*
Ga0070702_1004982932	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MTKDEEIEEFAVAALQLSQYLFMHLVDRNIIDPTEANRWLEQGIKLNSQGTEPHKRAAEILELLRQGLRRSGTTPSSL*
Ga0068866_107512771	3300005718	Miscanthus Rhizosphere	MTRDEEIEGIAIAALQLSEYLFIHLVDRNVIDPTEANQWLEQGIKLNSQGTEPHKRAAEILELLRQGLRRSGTTPSSL*
Ga0068861_1022918601	3300005719	Switchgrass Rhizosphere	MTNDAEIEGIALAALQLSKYLFLHFLDRNIIDPTEANQWLEQEIKLNSQGTEPHKRAAEIFEVLRQGLRRPMTTPPSL*
Ga0068851_101865682	3300005834	Corn Rhizosphere	MTKDEEIEEFAVAALQLSQYLFMHLVDRNIIDPTEANRWLEQGIKLNSQGTEPHKKAAEIFELLRQGLGRPATTPSSL*
Ga0068870_103219301	3300005840	Miscanthus Rhizosphere	MTRDEEIEGLTLAALQLSQYLFMHLVDRNIIDPTEANQWLEQGIKLNSQGTEPHKKAAEIFELLREGLRRPGTTPSSL*
Ga0068863_1020878772	3300005841	Switchgrass Rhizosphere	MTKDEEIEEFAVAALQLSQYLFMHLVDRNIIDPTEANQWLEQGIKLNSQGTEPHKKAAEIFELLREGLRRPGTTPSGL*
Ga0070712_1017097231	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTKDEEIEGIAIAALQLSEYLFMHLVDRNVIDPTEANQWLEQGIKLNSQGTEPHKKAAEIFELLREGLRRPGTTPSSL*
Ga0097621_1005510051	3300006237	Miscanthus Rhizosphere	MTKDEEIEGIALAALQLSKYLFMHFLDRNIIDPTEANEWLEQEIKLNSQGTEPHKRAAEILELLRQGLRRSGTTPSSL*
Ga0074059_119911541	3300006578	Soil	MTKDEEIEGIAIAALQLSEYLFMHLVDRNVIDPTEANQWLEQGIKLNNSQGTEPHKRAAEIFELLRQGLRRPGTTPPSL*
Ga0068865_1001569653	3300006881	Miscanthus Rhizosphere	MTRDEEIEGIAIAALQLSEYLFIHLVDRNVIDPTEANQWLEQGIKLNSQGTEPHKKAAEIFEFLRQGLRSSGEAPSSL*
Ga0111539_123626152	3300009094	Populus Rhizosphere	MTKDEEIEGIAIGALQLSEYLFIHLVDRIVIDPTEANQWLEQGIKFNSQGTEPHKKVAEIFELLRQGLRRPGTTPSSL*
Ga0105243_113047112	3300009148	Miscanthus Rhizosphere	MTNDEEIEGIALAALQLSKYLFMHFLDRNIIDPTEANEWLEQEIKLNSQGTEPHKRAAEIFELLRQGLRRPGTTPPSL*
Ga0105104_108463212	3300009168	Freshwater Sediment	MTNDEEIEGIALAALQLSKYLFLHFLDRNIIDPTEANQWLEQEINLNSQGTEPQKRAAEIFEVLRQGLRQPMTTPPSL*
Ga0105248_105579691	3300009177	Switchgrass Rhizosphere	IALAALQLSKYLFMHFLDRNIIDPTEANEWLEQEIKLNSQGTEPHKRAAEIFELLRQGLRRPGTTPPSL*
Ga0105238_110939952	3300009551	Corn Rhizosphere	MTRNEEIEGIALTALQLSQYLFMHLVDRNIIDPTEANQWLEQGIKLNSQGTEPHKRAAEILELLRQGLRRSGTTPSSL*
Ga0134125_110099453	3300010371	Terrestrial Soil	MTKDEEIEEFAVAALQLSQYLFMHLVDRNIIDPTEANQWLEQGIKLNSQGTEPHKKAAEIFEFLRQGLRSSGEAPSSL*
Ga0134125_129985412	3300010371	Terrestrial Soil	MTRNEEIEGIALTALQLSQYLFMHLVDRKIIDPTDAKQWLEQGIKLNSQGTEPHKRAAEILELLRQGLRRSGTTPSSL*
Ga0134128_124878802	3300010373	Terrestrial Soil	MTRDEEIEGIAIAALQLSEYLFIHLVDRNVIDPTEANQWLEQGIKLNSQGTEPHKKAAEIFELLRQGLRRPGTTPSSL*
Ga0134124_131721651	3300010397	Terrestrial Soil	MTKDEEIEGIAIAALQLSEYLFIHLVDRNVIDPTEANQWLEQGIKLNSQGTEPHKKAAEIFEFLRQGLRSSGEAPSSL*
Ga0134123_110728843	3300010403	Terrestrial Soil	MTKDEEIEGIATAAVQLSQYLFMHLVDRDIIDPTEANQWLEQGIKLNSQGTEPHKKAAEIFEFLRQGLRSSGEAPSSL*
Ga0137397_108536282	3300012685	Vadose Zone Soil	MTKDEEIEGIALAALQLSQYLFMHLVDRNIIDPTEANQWLEQGIKLNSQGTEPHKKAAEIFELLRQGLRRPGTTPSSL*
Ga0157294_101889502	3300012892	Soil	MTRDEEIEGFALAALQLSKYLFLHFLDRNIIDPTEANQWLEQEIKLNSQGTEPHKRAAEIFEVLRQGLRRPMTTPPSL*
Ga0157289_102453301	3300012903	Soil	MTKDEEIEGIALAALQLSKYLFMHFLDRNIIDPTEANEWLEQEIKLNSQGTEPHKRAAEIFEVLRQGLRRPMTTPPSL*
Ga0157283_102415711	3300012907	Soil	MTNDEEMEGIALAALQLSKYLFLHFLDRNIIDPTEANQWLEQEIKLNSQGTEPHKKAAEIFEVLRQGLRRPMTTPPSL*
Ga0157290_102651561	3300012909	Soil	MTRDEEIEGIALAALQLSKYLFLHFLDRNIIDPTEANQWLEQEIKLNSQGTEPHKRAAEIFEVLRQGLRRPMTTPPSL*
Ga0157301_103676511	3300012911	Soil	MTNDEEIEGIALAALQLSKYLFLHFLDRNIIDPTEANQWLEQEIKLNSQGTEPHKRAAEIFELLRQGLRRPGTTPPSL*
Ga0157306_102415201	3300012912	Soil	MSRDEEIEGLALAALQLSKYLFLHFLDRNIIDPTEANQWLEQEIKLNSQGTEPHKRAAEIFEVLRQGLRRPMTTPPSL*
Ga0157298_101613271	3300012913	Soil	MTKNEEIEGIALAALQLSKYLFLHFLDRNIIDPTEANQWLEQEIKLNSQGTEPHKRAAEIFEVLRQGLRRPMTTPPSL*
Ga0157310_105472362	3300012916	Soil	TTRDEEIEGIALAALQLSQYLFMHLVDRNIIDPTEANQWLEQEIKLNSQGTEPHKKAAEIFELLRQGLRRPMTTPPSL*
Ga0164300_107981562	3300012951	Soil	MTKDEEIEGIGLAALQLSQYLFMHLVDRNIIDPTEANQWLEQGIKLNSRGTEPHKKAAEIFELLRQ
Ga0164303_102499392	3300012957	Soil	MTKDEEIEGIAVAAVQLSQYLFMHLVDRNIIDPTEANQWLEQEIKFNSQGTEPHKRAATILELLHQGLRRSGTTPSSL*
Ga0164303_103620753	3300012957	Soil	MTKDEEIEGIGLAALQLSQYLFMHLVDRNIIDPTEANQWLEQGIKLNSRGTEPHKKAAEIFELLRQGLRRPGTTPSSL*
Ga0164299_116435161	3300012958	Soil	GIALTALQLSQYLFMHLVDRKIIDPTDAKQWLEQGIKLNSQGAEPQKKAAEIFELLRQGLGRPATTPSSL*
Ga0164302_102084052	3300012961	Soil	MTRDEEIEGIALAALQLSQYLFMHLVDRNIIDPTEANQWLEQGIKLNSQGTEPHKKAAEIFELLREGLRRPGTTPSSL*
Ga0164302_112068421	3300012961	Soil	MTRNEEIEGIALTALQLSQYLFMHLVDRNIIDPTEANQWLEQGIKLNSRGTEPHKKAAEIFELLRQGLRRPGTTPSSL*
Ga0164308_104248182	3300012985	Soil	MTKDEEIEEFAVAALQLSQYLFMHLVDRNIIDPTEANQWLEQGIKLNSQGTEPHKKAVESFELLRQGLRRPGTTPSSL*
Ga0164308_114660221	3300012985	Soil	MTKDEEIEGIAIAALQLSEYLFMHLVDRNVIDPAEANQWLEQGIKLNSQGTEPYKKAAEIFELLRQGLRRPGTTPSSL*
Ga0164307_109771992	3300012987	Soil	MTKDEEIEGIGLAALQLSQYLFMHLVDRNIIDPTEANQWLEQGIKLNSRGTEPHKKAAEIFELLREGLR
Ga0164306_102130712	3300012988	Soil	MTKDEEIEEFAVAALQLSQYLFMHLVDRNIIDPTEANQWLEQGIKLNSQGTEPHKKTAEIFELLRQGLRRPGTTPSSL*
Ga0163162_120360741	3300013306	Switchgrass Rhizosphere	MTRDEEIEGLTLAALQLSQYLFMHLVDRNIIDPTEANQWLEQGIKSNSKGTEPHKKAVEFFELLRQGMGRPGTTPSSL*
Ga0157380_133281861	3300014326	Switchgrass Rhizosphere	LNDEGQEIEGIALAALQLSQYLFMHLVDRNIIDPTEANQWLEQEINLNSQGTEPQKRAAEIFEVLRQGLRRPMTTPPSL*
Ga0157380_134162352	3300014326	Switchgrass Rhizosphere	MTKDEEIEGIATAAVQLSQYLFMHLVDRDIIDPTEANRWLEQGIKLNSQGTEPHKKAAEIFEFLRQGLRSSGEAPSSL*
Ga0173480_104951531	3300015200	Soil	MTKDEEIEGIALAALQLSKYLFMHFLDRNIIDPTEANEWLEQEIKLNSQGTEPHKRAAEIFELLRQ
Ga0173478_105791802	3300015201	Soil	ALQLSKYLFMHFLDRNIIDPTEANQWLEQEIKLNSQGTEPHKRAAEIFEVLRQGLRRPMTTPPSL*
Ga0132258_123356913	3300015371	Arabidopsis Rhizosphere	MTKDEEIEEFAVAALQLSQYLFMHLVDRNIIDPTEANQWLEQGIKLNSQGTEPHKKAAEIFELLR
Ga0132256_1030224391	3300015372	Arabidopsis Rhizosphere	MTKDEEIEEFAVAALQLSQYLFMHLVDRNIIDPTEANQWLEQGIKLNSQGTEPHKKAAEIFELLRQGLRRSGTTPSSL*
Ga0132255_1008523221	3300015374	Arabidopsis Rhizosphere	MTKDEEIEEFAVAALQLSQYLFMHLVDRNIIDPTEANQWLEQEIKFNSQGTEPHKRAATILELLHQGLRRS
Ga0163161_106557371	3300017792	Switchgrass Rhizosphere	MTKDEEIEGIAIAALQLSEYLFIHLVDRNVIDPTEANQWLEQGIKLNSQGTEPHKKAAEIFEFLRQGLRSSGEAPSSL
Ga0163161_120820541	3300017792	Switchgrass Rhizosphere	MTKDEEIEGIALAALQLSQYLFMHLVDRNIIDPTEANQWLEQGIKSNSKGTEPHKKAVEIFELLRQGLGRPGTTPSSL
Ga0190266_106834351	3300017965	Soil	MTKDEEIEGIALAALQLSQYLFMHLVDRNIIDPTEANQWLEQEIKLNSQGTEPHKRAAEIFELLRQGLRR
Ga0184611_10893942	3300018067	Groundwater Sediment	MTRDEEIEGLTLAALQLSHYLFMHLVDRNIIDPTEAKQWLEQEIKSQSKGTEPHKKAVEFFELLRQGMGRPGTTPSSL
Ga0184611_12441311	3300018067	Groundwater Sediment	MTKDEEIEGIALAALQLSKYLFMHFLDRNIIDPTEANEWLEQEIKLNSQGTEPHKRAAEIFELLRQGLRRPGTTPPSL
Ga0190270_107414671	3300018469	Soil	MTKDEEIEGLTLAALQLSHYLFMHLVDRNIIDPTEAKQWLEQEIKSQSKGTEPHKKAVEIFELLRQGLGRPGTTPSSL
Ga0190270_118343112	3300018469	Soil	MTNDAEIEGIALAALQLSKYLFLHFLDRNIINPTEANQWLEQEIKLNSQGTEPHKRAAEIFEVLRQGLRRPMTTPPSL
Ga0190270_120454892	3300018469	Soil	MKRDEEIEGTALAALQLSQYLFMHLVDRNIIDPTEANQWLEQGIKLNSQGTEPYKKAAEIFELLRQGLRQPGTTPSSL
Ga0190270_126648542	3300018469	Soil	MTKDEEIEGIAIAALQLSEYLFMHLVDRNVIDPTEANQWLEQGIKLNSQGTEPHKKAVEIFELLRQGLRRPGTTPSSL
Ga0190274_102500252	3300018476	Soil	MTKDEEIEGIALAALQLSQYLFMHLVDRNIIDPTEANQWLEQGIKSNSKGTEPHKKAVEFFELLRQGMGRPGTTPSSL
Ga0190274_124915082	3300018476	Soil	MTRDEEIEGIALAALQLSQYLFMHLVDRNIIDPTEANQWLEQGIKFNSQGTEPHKKAAEIFELLRQGLRRPGTTPSSL
Ga0190274_135878791	3300018476	Soil	MTRDDEIEGIALAALLLSKYLFLHLLDRNIIDPTEANQWLEQEIKLNSQGTEPHKRAAEIFEVLRQGLRRPMTTPPSL
Ga0190271_100134325	3300018481	Soil	MTRDEEIEGTALAALQLSQYLFMHLVDRNIIDPTEANQWLEQGIKLNSQGTEPYKKAAEIFELLRQGLRQPGTTPSSL
Ga0190271_106254661	3300018481	Soil	MTRDEEIEGLTLAALQLSQYLFMHLVDRNIIDPTEAKQWLEQGIKSNSTKGTEPHKIAVNIFELLRQGLGRPATLPSSL
Ga0190271_118239131	3300018481	Soil	MTKDEEIEGNALAALQLSEYLFMHLVDHNVIDPTEADQWLEQGIKLNSQGTEPYRKAAEIFELFRQGLRRPGTTPS
Ga0190271_127464852	3300018481	Soil	MTKNEEIEGIAIAALQLSEYLFMHLVDRDVIDPTEANQWLEQGIKLNAQGTEPHKKAVEIFELLRQGLRRPGTTPSSL
Ga0190271_129572941	3300018481	Soil	MTKDEEIEGIALAALQLSQYLLLHLVDRNIIDPTEANQWLEQEIKSNSKGTEPHKKAGEFFERFRQGLRRPGTTPSSL
Ga0173481_106692662	3300019356	Soil	MSRDEEIEGLALAALQLSKYLFLHFLDRNIIDPTEANQWLEQEIKLNSQEGTEPHKRAAEIFEVLRQGLRRPMTTPPSL
Ga0173482_101577001	3300019361	Soil	MTKDEEIEEFAVAALQLSQYLFMHLVDRNIIDPTEANQWLEQGIKLNSQGTEPHKKAAEIFELLREGLRRPGTTPSSL
Ga0173479_101742271	3300019362	Soil	MTRDEEIEGFALAALQLSKYLFLHFLDRNIIDPTEANQWLEQEIKLNSQGTEPHKKAAEIFELLRQGLRRPGTTPPSL
Ga0210380_103984571	3300021082	Groundwater Sediment	MTNDAEIEGIALAALQLSKYLFLHFLDRNIIDPTEANQWLEQEIKLNSQGTEPHKRAAEIFEVLRQGLRRPMTTPPSL
Ga0247787_10737811	3300022893	Soil	MTNDAEIEGIALAALQLSKYLFLHFLDRNIIDPTEANQWLEQEIKLNSQGTEPHKKAAEIFELLRQGLRRPMTTPPSL
Ga0207697_100794693	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MTKDEEIEGIALAALQLSKYLFMHFLDRNIIDPTEANEWLEQEIKLNSQGTEPHKKAAEIFELLREGLRRPGTTPSSL
Ga0207680_108920002	3300025903	Switchgrass Rhizosphere	MTRDEEIEGIAIAALQLSEYLFIHLVDRNVIDPTEANQWLEQGIKLNSQGTEPHKRAAEILELLRQGLRRSGTTPSSL
Ga0207645_104709192	3300025907	Miscanthus Rhizosphere	MTRDEEIEGIAIAAIQLSEYLFMHLVDRNVIDPTEANQWLEQGIKLNSQGTEPHKRAAEILELLRQGLRRSGTTPSSL
Ga0207643_101462333	3300025908	Miscanthus Rhizosphere	MTRDEEIEGLTLAALQLSQYLFMHLVDRNIIDPTEAKQWLEQGIKSNSTKGTEPHRMAVDIFELLRQGLRRPGTTPSSL
Ga0207705_113016321	3300025909	Corn Rhizosphere	KDEEIEEFAVAALQLSQYLFMHLVDRNIIDPTEANQWLEQGIKLNSQGTEPHKKAAEIFELLREGLRRPGTTPSSL
Ga0207693_108225521	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MTKDEEIEGIAIAALQLSEYLFMHLVDRNVIDPTEANQWLEQGIKLNSQGTEPHKKAAEIFELLREGLRRPGTTPSSL
Ga0207649_107914181	3300025920	Corn Rhizosphere	MTKDEEIEEFAVAALQLSQYLFMHLVDRNIIDPTEANQWLEQGIKLNSQGTEPHKKAAEIFELLRQGLRRPGTTPSSL
Ga0207659_108739561	3300025926	Miscanthus Rhizosphere	MTRNEEIEGIALTALQLSQYLFMHLVDRKIIDPTDAKQWLEQGIKLNSQGAEPQKKAAEIFELLRQGLRRPGTTPPSL
Ga0207659_111739482	3300025926	Miscanthus Rhizosphere	MTKDEEIEGIALAALQLSKYLFMHFLDRNIIDPTEANQWLEQGIKLNSQGTEPHKRAAEILELLRQGLRR
Ga0207687_100122502	3300025927	Miscanthus Rhizosphere	MTKDEEIEGIATAAVQLSQYLFMHLVDRDIIDPTEANQWLEQGIKLNSQGTEPHKKAAEIFELLREGLRRPGTTPSSL
Ga0207706_103849442	3300025933	Corn Rhizosphere	MTKDEEIEGIATAAVQLSQYLFMHLVDRDIIDPTEANQWLEQGIKLNSQGTEPHKRAAEILELLRQGLRRSGTTPSSL
Ga0207706_107325003	3300025933	Corn Rhizosphere	VTRDEEIEGIAIAALQLSEYLFMHLVDRNVIDPTEAKQWLEQGIKLNNSQGTEPHKKAAEIFELLRQGLRRPGTTPSSL
Ga0207709_104594902	3300025935	Miscanthus Rhizosphere	MTKDEEIEGIATAAVQLSQYLFMHLVDRDIIDPTEANRWLEQGIKLNSQGTEPHKRAAEILELLRQGLRRSGTTPSSL
Ga0207670_118766961	3300025936	Switchgrass Rhizosphere	MTKDEEIEGIALAALQLSKYLFMHFLDRNIIDPTEANEWLEQEIKLNSQGTEPHKRAAEIFELLRQGLRRPGTTPP
Ga0207669_103235283	3300025937	Miscanthus Rhizosphere	MTRDEEIEGIAIAALQLSEYLFIHLVDRNVIDPTEANRWLEQGIKLNSQGTEPHKKAAEIFEFLRQGLRSSGEAPSSL
Ga0207704_108491353	3300025938	Miscanthus Rhizosphere	MTRDEEIEGIAIAALQLSEYLFIHLVDRNVIDPTEANQWLEQGIKLNSQGTEPHKKAAEIFEFLRQAC
Ga0207691_105813952	3300025940	Miscanthus Rhizosphere	MTKDEEIEEFAVAALQLSQYLFMHLVDRNIIDPTEANQWLEQGIKLNSQGTEPHKRAEEILELLRQGLRRSGTTPSSL
Ga0207689_107350663	3300025942	Miscanthus Rhizosphere	MTRDEEIEGIAIAALQLSEYLFIHLVDRNVIDPTEANQWLEQGIKLNSQGTEPHKKAAEIFEFLRQGLRSSGEAPSSL
Ga0207679_102685622	3300025945	Corn Rhizosphere	MTKDEEIEEFAVAALQLSQYLFMHLVDRNIIDPTEANRWLEQGIKLNSQGTEPHKKAAEIFELLRQGLRRPGTTPSSL
Ga0207640_111632012	3300025981	Corn Rhizosphere	MTKDEEIEGIALAALQLSQYLFMHLVDRNVTDPTEANQWLEQSIKLNSQGTEPHKKAVEIFELLRQGLRRPGTTPSSL
Ga0207708_113885152	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MTRDEEIEGIAIAALQLSEYLFIHLVDRNVIDPTEANQWLEQGIKLNSQGTEPHKKAAEIFELLRQGLRRPGTTPSSL
Ga0207641_115948462	3300026088	Switchgrass Rhizosphere	MTKDEEIEGIAIAALQLSEYLFMHLVDRDIIDPTEANRWLEQGIKLNSQGTEPHKRAAEIFELLRQGLRRPGTTPPSL
Ga0207683_103237071	3300026121	Miscanthus Rhizosphere	AALQLSKYLFMHFLDRNIIDPTEANEWLEQEIKLNSQGTEPHKRAAEIFELLRQGLRRPGTTPPSL
Ga0207683_109809601	3300026121	Miscanthus Rhizosphere	MTRDEEIEGLTLAALQLSQYLFMHLVDRNIIDPTEAKQWLEQGIKSNSTKGTGPHRMAVDIFELLRQGLGRPATLPSSL
Ga0268264_123585511	3300028381	Switchgrass Rhizosphere	GVVEMTRDEEIEGIAIAALQLSEYLFIHLVDRNVIDPTEANQWLEQGIKLNSQGTEPHKKAAEIFEFLRQGLRSSGEAPSSL
Ga0307294_100938951	3300028810	Soil	MTRDEEIEGLTLAALQLSQYLFMQLVDRNVIDPSEAKQWLEQGIKSNSTKGTGPHRMAVDIFELLRQGLGRPATLPSSL
Ga0170834_1061346302	3300031057	Forest Soil	MTKDEEIERIALAALQLSQYLFMHLVDRNIIDPTEANQWLEQSIKLNSHGTEPHKKAAEIFELLRQGLRRPGTTPSSL
Ga0308181_10853662	3300031099	Soil	MTRDEEIEGLTLAALQLSQYLFMHLVDRNIIDPTEAKQWLEQGIKLNSQGTEPHKKAAEIFELLRQGLRRPGTTPSSL
Ga0170822_142420721	3300031122	Forest Soil	MTKDEEIERIALAALQLSQYLFMHLVDRNIIDPAEANQWLEQAIKLNSQGTEPHKKAVEIFELLRQGLRRPGTTPSSL
Ga0170819_166959882	3300031469	Forest Soil	MTKDEEIEGIAIAALQLSEYLFMHLVDRNVIDPTEANQWLEQGIKLNSQGTEPHKKAAEIFELL
Ga0170818_1026258591	3300031474	Forest Soil	MTKDEEIEGIAIAALQLSEYLFMHLVDRNVIDPTEANQWLEQGIKLNSQGTEPHKKAAEIFEILRQGLGRPATTPSSL
Ga0307468_1016972672	3300031740	Hardwood Forest Soil	MTKDEQIEGIAIAALQLSEYLFMHLVDRNVIDPTEADQWLEQGIKLNSQGTEPHKKAAEIFELLRQGLRRQGTTPSSL
Ga0310900_115981462	3300031908	Soil	MTKDEEIEGIAIAALQLSEYLFMHLVDRNVIDPAEASQWLEQGIKLNSQGAEPYKKAAEIFELLRQGLRRPGTTPSSL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069126

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences