Metagenome / Metatranscriptome Family F069100

Basic Information
Family ID	F069100
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	42 residues
Representative Sequence	TQMRLSSTGNAFLLQGSLRAFEGANEVCRRDWDRSIPRDFS
Number of Associated Samples	111
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	4.03 %
% of genes near scaffold ends (potentially truncated)	96.77 %
% of genes from short scaffolds (< 2000 bps)	91.13 %
Associated GOLD sequencing projects	110
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.56

Most Common Taxonomy
Group	Bacteria (95.161 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (25.806 % of family members)
Environment Ontology (ENVO)	Unclassified (31.452 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (54.839 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 44.93% Coil/Unstructured: 55.07%
Feature Viewer

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Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF07681	DoxX	27.42
PF00903	Glyoxalase	6.45
PF00753	Lactamase_B	3.23
PF01862	PvlArgDC	2.42
PF14224	DUF4331	2.42
PF03475	3-alpha	1.61
PF00561	Abhydrolase_1	1.61
PF00027	cNMP_binding	1.61
PF07992	Pyr_redox_2	1.61
PF02077	SURF4	1.61
PF02627	CMD	1.61
PF02739	5_3_exonuc_N	0.81
PF08530	PepX_C	0.81
PF02148	zf-UBP	0.81
PF03315	SDH_beta	0.81
PF07690	MFS_1	0.81
PF12681	Glyoxalase_2	0.81
PF00296	Bac_luciferase	0.81
PF13826	DUF4188	0.81
PF02633	Creatininase	0.81
PF12680	SnoaL_2	0.81
PF05222	AlaDh_PNT_N	0.81
PF00534	Glycos_transf_1	0.81
PF13561	adh_short_C2	0.81
PF06441	EHN	0.81
PF00106	adh_short	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	29.03
COG4270	Uncharacterized membrane protein	Function unknown [S]	27.42
COG1945	Pyruvoyl-dependent arginine decarboxylase	Amino acid transport and metabolism [E]	2.42
COG0599	Uncharacterized conserved protein YurZ, alkylhydroperoxidase/carboxymuconolactone decarboxylase family	General function prediction only [R]	1.61
COG2128	Alkylhydroperoxidase family enzyme, contains CxxC motif	Inorganic ion transport and metabolism [P]	1.61
COG2258	N-hydroxylaminopurine reductase YiiM, contains MOSC domain	Defense mechanisms [V]	1.61
COG0258	5'-3' exonuclease Xni/ExoIX (flap endonuclease)	Replication, recombination and repair [L]	0.81
COG0596	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold	Coenzyme transport and metabolism [H]	0.81
COG1402	Creatinine amidohydrolase/Fe(II)-dependent FAPy formamide hydrolase (riboflavin and F420 biosynthesis)	Coenzyme transport and metabolism [H]	0.81
COG1760	L-serine deaminase	Amino acid transport and metabolism [E]	0.81
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.81
COG2936	Predicted acyl esterase	General function prediction only [R]	0.81
COG5207	Uncharacterized Zn-finger protein, UBP-type	General function prediction only [R]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.16 %
Unclassified	root	N/A	4.84 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.16 %
Unclassified	root	N/A	4.84 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.16 %
Unclassified	root	N/A	4.84 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	79.03 %
Unclassified	root	N/A	4.84 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	2.42 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.61 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	45.16 %
Unclassified	root	N/A	4.84 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	2.42 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.61 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	12.90 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	12.90 %
Unclassified	root	N/A	4.84 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4.03 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	2.42 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.61 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.81 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	12.90 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	10.48 %
Unclassified	root	N/A	4.84 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	2.42 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	2.42 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	0.81 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.81 %
unclassified Xanthomonadales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales	0.81 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	12.90 %
Unclassified	root	N/A	4.84 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2.42 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	2.42 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.42 %
Afipia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia	1.61 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.81 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.81 %
Acidisoma	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma	0.81 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	12.90 %
Unclassified	root	N/A	4.84 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2.42 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	2.42 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.42 %
Afipia broomeae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia broomeae	1.61 %
unclassified Acidisoma	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → unclassified Acidisoma	0.81 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.81 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	12.90 %
Unclassified	root	N/A	4.84 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	2.42 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	2.42 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2.42 %
Afipia broomeae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia broomeae	1.61 %
Acidisoma sp. L85	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → unclassified Acidisoma → Acidisoma sp. L85	0.81 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.81 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000793\|AF_2010_repII_A001DRAFT_10044887	All Organisms → cellular organisms → Bacteria	1000	Open in IMG/M
3300002245\|JGIcombinedJ26739_101609430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	547	Open in IMG/M
3300002245\|JGIcombinedJ26739_101632397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	542	Open in IMG/M
3300005171\|Ga0066677_10848836	All Organisms → cellular organisms → Bacteria → Proteobacteria	503	Open in IMG/M
3300005332\|Ga0066388_103371909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	816	Open in IMG/M
3300005332\|Ga0066388_108800604	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	501	Open in IMG/M
3300005365\|Ga0070688_100957163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	678	Open in IMG/M
3300005471\|Ga0070698_101610053	All Organisms → cellular organisms → Bacteria → Proteobacteria	601	Open in IMG/M
3300005591\|Ga0070761_11092178	All Organisms → cellular organisms → Bacteria → Proteobacteria	508	Open in IMG/M
3300005610\|Ga0070763_10837554	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	545	Open in IMG/M
3300005713\|Ga0066905_101317562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	650	Open in IMG/M
3300005713\|Ga0066905_101464435	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	620	Open in IMG/M
3300005842\|Ga0068858_101975336	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300005843\|Ga0068860_101794478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	635	Open in IMG/M
3300006028\|Ga0070717_11614724	All Organisms → cellular organisms → Bacteria → Proteobacteria	587	Open in IMG/M
3300006059\|Ga0075017_100422353	All Organisms → cellular organisms → Bacteria → Proteobacteria	1003	Open in IMG/M
3300006086\|Ga0075019_10371922	All Organisms → cellular organisms → Bacteria → Proteobacteria	870	Open in IMG/M
3300006176\|Ga0070765_100242153	All Organisms → cellular organisms → Bacteria → Proteobacteria	1651	Open in IMG/M
3300006176\|Ga0070765_101938276	All Organisms → cellular organisms → Bacteria → Proteobacteria	552	Open in IMG/M
3300006176\|Ga0070765_102040459	All Organisms → cellular organisms → Bacteria → Proteobacteria	536	Open in IMG/M
3300006194\|Ga0075427_10074933	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	606	Open in IMG/M
3300006791\|Ga0066653_10260464	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	883	Open in IMG/M
3300006939\|Ga0081244_1194577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	538	Open in IMG/M
3300009520\|Ga0116214_1371910	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	555	Open in IMG/M
3300009524\|Ga0116225_1338942	All Organisms → cellular organisms → Bacteria → Proteobacteria	670	Open in IMG/M
3300009665\|Ga0116135_1185450	All Organisms → cellular organisms → Bacteria	790	Open in IMG/M
3300009826\|Ga0123355_11200461	All Organisms → cellular organisms → Bacteria → Proteobacteria	774	Open in IMG/M
3300010046\|Ga0126384_11090992	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	731	Open in IMG/M
3300010048\|Ga0126373_11424710	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300010362\|Ga0126377_12140745	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	636	Open in IMG/M
3300010362\|Ga0126377_13421465	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300010400\|Ga0134122_11556186	All Organisms → cellular organisms → Bacteria → Proteobacteria	683	Open in IMG/M
3300010869\|Ga0126359_1145280	Not Available	1005	Open in IMG/M
3300012205\|Ga0137362_10580975	All Organisms → cellular organisms → Bacteria	967	Open in IMG/M
3300012207\|Ga0137381_10404978	Not Available	1190	Open in IMG/M
3300012582\|Ga0137358_10671062	All Organisms → cellular organisms → Bacteria → Proteobacteria	693	Open in IMG/M
3300012923\|Ga0137359_10346555	All Organisms → cellular organisms → Bacteria → Proteobacteria	1320	Open in IMG/M
3300014155\|Ga0181524_10331600	All Organisms → cellular organisms → Bacteria → Proteobacteria	683	Open in IMG/M
3300014156\|Ga0181518_10537780	Not Available	550	Open in IMG/M
3300014325\|Ga0163163_11657400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	700	Open in IMG/M
3300014495\|Ga0182015_10540390	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	742	Open in IMG/M
3300014745\|Ga0157377_11163121	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	595	Open in IMG/M
3300014969\|Ga0157376_12358263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	571	Open in IMG/M
3300015264\|Ga0137403_11330411	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	565	Open in IMG/M
3300016319\|Ga0182033_10526475	All Organisms → cellular organisms → Bacteria → Proteobacteria	1019	Open in IMG/M
3300016357\|Ga0182032_10317311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1236	Open in IMG/M
3300016371\|Ga0182034_10766428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	824	Open in IMG/M
3300016387\|Ga0182040_10045122	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2702	Open in IMG/M
3300016387\|Ga0182040_10737991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	807	Open in IMG/M
3300016404\|Ga0182037_10023432	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3824	Open in IMG/M
3300017926\|Ga0187807_1226902	All Organisms → cellular organisms → Bacteria	609	Open in IMG/M
3300017961\|Ga0187778_10162049	All Organisms → cellular organisms → Bacteria	1415	Open in IMG/M
3300017970\|Ga0187783_10223407	All Organisms → cellular organisms → Bacteria → Proteobacteria	1380	Open in IMG/M
3300017975\|Ga0187782_10636337	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300018058\|Ga0187766_10757763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	675	Open in IMG/M
3300018062\|Ga0187784_10886507	All Organisms → cellular organisms → Bacteria → Proteobacteria	710	Open in IMG/M
3300018086\|Ga0187769_10317655	All Organisms → cellular organisms → Bacteria → Proteobacteria	1165	Open in IMG/M
3300020006\|Ga0193735_1150740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisoma → unclassified Acidisoma → Acidisoma sp. L85	603	Open in IMG/M
3300020034\|Ga0193753_10172263	Not Available	1014	Open in IMG/M
3300020580\|Ga0210403_11235059	All Organisms → cellular organisms → Bacteria → Proteobacteria	574	Open in IMG/M
3300020581\|Ga0210399_10688623	All Organisms → cellular organisms → Bacteria → Proteobacteria	841	Open in IMG/M
3300021082\|Ga0210380_10499501	All Organisms → cellular organisms → Bacteria → Proteobacteria	557	Open in IMG/M
3300021168\|Ga0210406_10436646	All Organisms → cellular organisms → Bacteria → Proteobacteria	1044	Open in IMG/M
3300021171\|Ga0210405_10110303	All Organisms → cellular organisms → Bacteria → Proteobacteria	2172	Open in IMG/M
3300021402\|Ga0210385_11215805	All Organisms → cellular organisms → Bacteria → Proteobacteria	578	Open in IMG/M
3300021403\|Ga0210397_11044509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	634	Open in IMG/M
3300021404\|Ga0210389_10602172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	863	Open in IMG/M
3300021406\|Ga0210386_10247979	All Organisms → cellular organisms → Bacteria	1518	Open in IMG/M
3300021407\|Ga0210383_10854673	All Organisms → cellular organisms → Bacteria → Proteobacteria	777	Open in IMG/M
3300021433\|Ga0210391_10091763	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2396	Open in IMG/M
3300021433\|Ga0210391_10396124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1084	Open in IMG/M
3300021433\|Ga0210391_11521917	All Organisms → cellular organisms → Bacteria → Proteobacteria	513	Open in IMG/M
3300021477\|Ga0210398_11565577	All Organisms → cellular organisms → Bacteria → Proteobacteria	511	Open in IMG/M
3300021478\|Ga0210402_10683015	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia broomeae	949	Open in IMG/M
3300021479\|Ga0210410_10450822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	1151	Open in IMG/M
3300022557\|Ga0212123_10420793	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300025914\|Ga0207671_10040342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	3456	Open in IMG/M
3300025928\|Ga0207700_10037634	All Organisms → cellular organisms → Bacteria → Proteobacteria	3505	Open in IMG/M
3300026507\|Ga0257165_1058002	Not Available	700	Open in IMG/M
3300027047\|Ga0208730_1004785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1335	Open in IMG/M
3300027535\|Ga0209734_1046125	All Organisms → cellular organisms → Bacteria	822	Open in IMG/M
3300027567\|Ga0209115_1048131	All Organisms → cellular organisms → Bacteria → Proteobacteria	971	Open in IMG/M
3300027619\|Ga0209330_1006450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2643	Open in IMG/M
3300027645\|Ga0209117_1063902	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1061	Open in IMG/M
3300027680\|Ga0207826_1065136	All Organisms → cellular organisms → Bacteria → Proteobacteria	1005	Open in IMG/M
3300027684\|Ga0209626_1075669	All Organisms → cellular organisms → Bacteria → Proteobacteria	859	Open in IMG/M
3300027829\|Ga0209773_10187145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Afipia → Afipia broomeae	865	Open in IMG/M
3300027867\|Ga0209167_10503304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	663	Open in IMG/M
3300027908\|Ga0209006_10559014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	949	Open in IMG/M
3300028047\|Ga0209526_10340584	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1007	Open in IMG/M
3300028379\|Ga0268266_12164823	All Organisms → cellular organisms → Bacteria	528	Open in IMG/M
3300028747\|Ga0302219_10013679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3033	Open in IMG/M
3300028800\|Ga0265338_10970633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	576	Open in IMG/M
3300028876\|Ga0307286_10116004	All Organisms → cellular organisms → Bacteria → Proteobacteria	947	Open in IMG/M
3300030520\|Ga0311372_12457599	All Organisms → cellular organisms → Bacteria → Proteobacteria	587	Open in IMG/M
3300030763\|Ga0265763_1000759	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	2109	Open in IMG/M
3300031572\|Ga0318515_10040751	All Organisms → cellular organisms → Bacteria → Proteobacteria	2306	Open in IMG/M
3300031708\|Ga0310686_107712657	All Organisms → cellular organisms → Bacteria → Proteobacteria	593	Open in IMG/M
3300031715\|Ga0307476_10635079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	792	Open in IMG/M
3300031716\|Ga0310813_10361611	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1239	Open in IMG/M
3300031740\|Ga0307468_100316493	All Organisms → cellular organisms → Bacteria → Proteobacteria	1143	Open in IMG/M
3300031744\|Ga0306918_11172132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	594	Open in IMG/M
3300031748\|Ga0318492_10046774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2007	Open in IMG/M
3300031764\|Ga0318535_10439643	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	581	Open in IMG/M
3300031771\|Ga0318546_10862184	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300031771\|Ga0318546_10950381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	605	Open in IMG/M
3300031792\|Ga0318529_10100736	All Organisms → cellular organisms → Bacteria → Proteobacteria	1303	Open in IMG/M
3300031793\|Ga0318548_10078054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	1561	Open in IMG/M
3300031797\|Ga0318550_10510096	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	580	Open in IMG/M
3300031837\|Ga0302315_10291921	All Organisms → cellular organisms → Bacteria → Proteobacteria	939	Open in IMG/M
3300031845\|Ga0318511_10458968	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	587	Open in IMG/M
3300031912\|Ga0306921_11192077	All Organisms → cellular organisms → Bacteria	848	Open in IMG/M
3300031962\|Ga0307479_11234855	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	710	Open in IMG/M
3300031981\|Ga0318531_10259800	Not Available	784	Open in IMG/M
3300031981\|Ga0318531_10341401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	677	Open in IMG/M
3300032039\|Ga0318559_10617883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	505	Open in IMG/M
3300032052\|Ga0318506_10571679	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	500	Open in IMG/M
3300032094\|Ga0318540_10393886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	669	Open in IMG/M
3300032205\|Ga0307472_102093890	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	569	Open in IMG/M
3300032805\|Ga0335078_10654303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1313	Open in IMG/M
3300032805\|Ga0335078_12748030	All Organisms → cellular organisms → Bacteria → Proteobacteria	500	Open in IMG/M
3300033134\|Ga0335073_10768419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1040	Open in IMG/M
3300033289\|Ga0310914_10355548	All Organisms → cellular organisms → Bacteria → Proteobacteria	1324	Open in IMG/M
3300033289\|Ga0310914_11398348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	603	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	91.94%
Host-Associated	Host-Associated	8.06%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	84.68%
Aquatic	Environmental → Aquatic	7.26%
Plants	Host-Associated → Plants	7.26%
Arthropoda	Host-Associated → Arthropoda	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.26%
Freshwater	Environmental → Aquatic → Freshwater	4.84%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.84%
Peat	Environmental → Terrestrial → Peat	2.42%
Sediment	Environmental → Aquatic → Sediment	1.61%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.61%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.81%
Digestive System	Host-Associated → Arthropoda → Digestive System	0.81%
Roots	Host-Associated → Plants → Roots	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.03%
Loam	Environmental → Terrestrial → Soil → Loam	20.16%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.06%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	4.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	3.23%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.61%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.61%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.61%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.81%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.81%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	0.81%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.81%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	36.29%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.13%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	16.13%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	7.26%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	3.23%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.42%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.61%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.81%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.81%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.81%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	0.81%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.81%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.81%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.81%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.81%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	0.81%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.06%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.84%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.84%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.03%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.03%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.23%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.23%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.42%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.42%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.61%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.61%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.61%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.81%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.81%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.81%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.81%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	0.81%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.81%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.81%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.81%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.81%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.81%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.81%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.81%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.81%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000793	Forest soil microbial communities from Amazon forest - 2010 replicate II A001	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006939	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A10 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300009520	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_1_NS metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009665	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_10	Environmental	Open in IMG/M
3300009826	Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010869	Boreal forest soil eukaryotic communities from Alaska, USA - W4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014156	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_60_metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300020006	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2	Environmental	Open in IMG/M
3300020034	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c2	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026507	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-B	Environmental	Open in IMG/M
3300027047	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF042 (SPAdes)	Environmental	Open in IMG/M
3300027535	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027619	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O3 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027684	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M2 (SPAdes)	Environmental	Open in IMG/M
3300027829	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030763	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031837	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_N3_1	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.56
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.56
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069100

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AF_2010_repII_A001DRAFT_100448871	3300000793	Forest Soil	TQLRLSCNRDVFRLQGSLRAWEGANEVCRRDWDRSIARDFL*
JGIcombinedJ26739_1016094301	3300002245	Forest Soil	VRVETRLRLSSTGSAFLLQGSLRAWEGANELCHREWDRTIARDFL*
JGIcombinedJ26739_1016323971	3300002245	Forest Soil	IRVETQLRLSATGNTFLLQGSMRAFEGANEMCRRDWDRSIPRDFL*
Ga0066677_108488362	3300005171	Soil	QVRIETQMRLSCTREVFLLQASLRAWEGADEVCRRDWDRAIARDFL*
Ga0066388_1033719092	3300005332	Tropical Forest Soil	RIETQMRLTSTRDAFLLRASLRAFEGATEVCHREWDRAIPRDFM*
Ga0066388_1088006042	3300005332	Tropical Forest Soil	QIRIETQMRLASTRNAFLLQASLIATENANEVCRRDWDRTIPRDFV*
Ga0070688_1009571632	3300005365	Switchgrass Rhizosphere	AWQIRVETQMRLSSTADVFLLQGGLRAWEGGKEVYHRTCDRSISRDFM*
Ga0070698_1016100532	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	QMRLSCTREVFLLQASLRAWEGADEVCRRDWDRAIARDFL*
Ga0070761_110921781	3300005591	Soil	RLRLSSTGSAFLLQGSLRAWEGANEVCHREWDRAIPRDFL*
Ga0070763_108375541	3300005610	Soil	NEWQVRVETRLRLSSTGSAFLLQGSLRAWEGANELCHREWDRTIARDFL*
Ga0066905_1013175622	3300005713	Tropical Forest Soil	KIGIETQMRLSCTRNAFVLWGSLRAWEGANEVCQREWSRSIARDFL*
Ga0066905_1014644351	3300005713	Tropical Forest Soil	KIGIETQMRLSCTRNAFVLWGSLRAWEGANEVCQREWSRSVARDFL*
Ga0068858_1019753361	3300005842	Switchgrass Rhizosphere	QLRMSSTSNAFLLKVSLCAFDGDNEVCRRNWDRSIPRDFL*
Ga0068860_1017944781	3300005843	Switchgrass Rhizosphere	QIRIETEMRLSSTRDSFRLQGRLRAAEGETEVCRRDWDRSIPRDCL*
Ga0070717_116147242	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	TQMRLSCTREVFLLQASLRAWEGANEVCRRDWDRAIARDFL*
Ga0075017_1004223531	3300006059	Watersheds	TQLRLSSTGGAFLLQGSLRAFEGTNEVHRREWDRSIPRDSS*
Ga0075019_103719223	3300006086	Watersheds	RMSSTGNAFLLQGRLRAFEGDNEVCRRDWDRSIPRDFL*
Ga0070765_1002421531	3300006176	Soil	RLSATANAFLLQGSMRAFEGANEVCRRDWDRSIPRDFL*
Ga0070765_1019382762	3300006176	Soil	ETQLRMSSTANAFLLQGSMRAFEGANEVCRRDWDRTITRDFS*
Ga0070765_1020404592	3300006176	Soil	NEWQIRIDTQLRLSATSNAFVLQASLRAWEGTNEICHREWDRAIPRDFL*
Ga0075427_100749331	3300006194	Populus Rhizosphere	TQMRLSCTRDVFLLQASLRAWEGPNEVCHRDWDRSIPRDFL*
Ga0066653_102604641	3300006791	Soil	IETQMRLSCTRTAFLLQGSLRAWEGAIEVCHRDWDRTIPRDFL*
Ga0081244_11945771	3300006939	Tropical Rainforest Soil	ATANDFLLQGGLRAWEGTKEVCRREWYRPIPRDFL*
Ga0116214_13719101	3300009520	Peatlands Soil	MRLSSTRDTFLLQGSLRAFEGANEVCRRDCDCSIPRDFL
Ga0116225_13389422	3300009524	Peatlands Soil	SSTGNAFLLQGSMRAFEGANEVCRRDWDRSIPRDFS*
Ga0116135_11854501	3300009665	Peatland	ETQLRMSSTADAFLLQGSLRAFEGANEVCHRDWDRSVPRDFS*
Ga0123355_112004611	3300009826	Termite Gut	RLSSTRDTLLLQGSLRAFEGATEVCRRDWDRSVPRDLL*
Ga0126384_110909921	3300010046	Tropical Forest Soil	MRLSCTRNAFVLWGSLRAWEGANEVCQREWSRSIARDFL*
Ga0126373_114247101	3300010048	Tropical Forest Soil	LSCTRDVFLLQASLRAWEGANEVCRRDWDRSIACDFL*
Ga0126377_121407451	3300010362	Tropical Forest Soil	RDAWHVRVETEMRLSSTRDSFQLQGHLRAAEGAMEVCRRDWDLLIPRDCL*
Ga0126377_134214651	3300010362	Tropical Forest Soil	TQMRLSCNRDAFLLHGRLRASEGTNEVCHREWDRSIPRDFM*
Ga0134122_115561862	3300010400	Terrestrial Soil	ETQMRLSCNRDVFLLQGDLRAWEGADEVCHREWDLAIPRDFV*
Ga0126359_11452802	3300010869	Boreal Forest Soil	MRLSCTHDAFLLQASLRAWEGTSEVCHREWDHSIPRDLV*
Ga0137362_105809753	3300012205	Vadose Zone Soil	RLSCTRDVFRLQATLRAREGANEVSHREWDLSIPRDFM*
Ga0137381_104049783	3300012207	Vadose Zone Soil	SSTANAFLLQGGLRAWEGTNEVCHREWDRSIPRDFM*
Ga0137358_106710621	3300012582	Vadose Zone Soil	ETQLRLSSTGNAFLLQGSLRAWEGANEVCRRDWDRSIPRDFS*
Ga0137359_103465551	3300012923	Vadose Zone Soil	VRIETQMRLSCTREVFLLQASLRAWEGADEVCRRDWDRAIARDFL*
Ga0181524_103316001	3300014155	Bog	TQLRMSSTGNAFLLQGSMRAFEGANEVCRRDWDRSIPRDFS*
Ga0181518_105377802	3300014156	Bog	VETQLRLSSTGNAFLLQGSLGAWVGANEVFRRDWDRSIPRDFL*
Ga0163163_116574002	3300014325	Switchgrass Rhizosphere	WQIRVETLLRMSSTSNAFLLKGSLCAFDGDNEVCRRNWDRSIPRDFL*
Ga0182015_105403902	3300014495	Palsa	NEWQIRVETQLRLSCTASAFVLHGSLRAWEGANEMYGREWDRTIARDFL*
Ga0157377_111631211	3300014745	Miscanthus Rhizosphere	IRVETQMRLSCTRNDFLLQGSLRAWDGANEVCHREWDRSVPRDFL*
Ga0157376_123582632	3300014969	Miscanthus Rhizosphere	AWQIRIKAQMRLSCTRNAFLLRGSLRAWEGASEVCHRDWDRSIARDFL*
Ga0137403_113304111	3300015264	Vadose Zone Soil	ETQMRLSCTREVFLLQASLRAWEGANEVCRRDWDRAIARDFL*
Ga0182033_105264751	3300016319	Soil	IQLSSTRTDFRLRGDLRAWEGTDEVCGREWDRSIPRDFV
Ga0182032_103173112	3300016357	Soil	RVETQLRLSATGSDFRLQGSLHAWDGANEICRRDWDRSIPRDFS
Ga0182034_107664281	3300016371	Soil	MRLSCNRDAFLLHGRLRASEGANEVCHREWDRSIPRDFM
Ga0182040_100451222	3300016387	Soil	MSRDEWQIRIETQMRLSSSRDAFLLQGGLGACERANERCSRDWDRSIHRDFL
Ga0182040_107379911	3300016387	Soil	TQMRLSSTRNDFLLQGSLRAWEGASEVCHREWGRCIARDFM
Ga0182037_100234323	3300016404	Soil	MSRDEWQIRIETQMRLSSSRDAFLLQGGLRACERANELCSRDWDRSIHRDFL
Ga0187807_12269022	3300017926	Freshwater Sediment	NEWQIRVETQMRLSSTGNAFLLQGSLRAWEGANEVCRRNRDRSIPRDFM
Ga0187778_101620491	3300017961	Tropical Peatland	IRVETQMRLSSTGNAFLLQGSLRAWEGANEVCRRNRDRSIPRDFM
Ga0187783_102234075	3300017970	Tropical Peatland	RLSCTRNTFLLQGTLRAWEGGKEMCSREWNRTIARDFL
Ga0187782_106363371	3300017975	Tropical Peatland	RIETQLRLSSTANAFLLQGSLRAWEGADEVCRRDWDRSVPRDFL
Ga0187766_107577632	3300018058	Tropical Peatland	ETRIRLSCTREAFLLQAHLRAWEGASEVCHREWNRSIPRDFL
Ga0187784_108865071	3300018062	Tropical Peatland	TQMRLSSTDKAFLLQASLRAFEGANEVCRRDWDRSIPRDFM
Ga0187769_103176552	3300018086	Tropical Peatland	ATRDTFVLQGSFRAFEGANEVCHREWNRTIARDFL
Ga0193735_11507401	3300020006	Soil	VETRLRMSSTDNAFLLQGSLRAFEGSNEVCRRDWDRSIPRDFL
Ga0193753_101722632	3300020034	Soil	LSCTRDMFLLRASLRAWEGASEVCHREWDRSIPRDLS
Ga0210403_112350591	3300020580	Soil	SRLRGREWQIRIETQLRLSSTGNAFLLQGSLRAWEGTNEVCRRDWDRSIPRDFS
Ga0210399_106886231	3300020581	Soil	LSCTRDTFLLQASLHAFEGANEVCRRDWDRTIPRDFL
Ga0210380_104995012	3300021082	Groundwater Sediment	RLSCNRDVFLLQGDLRAWEGADEVCHREWDLAIPRDFV
Ga0210406_104366463	3300021168	Soil	QMRLSCTRDTFLLQASLRAWEGENEVCRRDWDRAIAREFL
Ga0210405_101103031	3300021171	Soil	IRVETQMRMSSTGNAFLLQGRLRAFEGDNEVCRRDWDRSIPRDFL
Ga0210385_112158051	3300021402	Soil	HMRLSSTGNAFLLQGSLRAFEGDNEVCRRDWDRSIPRDFL
Ga0210397_110445091	3300021403	Soil	LSSSRNAFLLQGSMRAFEGANEVCRRDWDRSIPRDFL
Ga0210389_106021723	3300021404	Soil	STAKAFLLQGSVRAFEGANEVCRRDWDRSIPRDFS
Ga0210386_102479795	3300021406	Soil	SVGNAFLLQATLRAWEGANEVCHRDWDRSIPRDFL
Ga0210383_108546732	3300021407	Soil	ETHMRLSSTGNAFLLQGSLRAFEGDNEVCRRDWDRSIPRDFL
Ga0210391_100917635	3300021433	Soil	QLRLSATANAFLLQGSLRAFEGANEVCRRDWDRSIPRDFS
Ga0210391_103961241	3300021433	Soil	RLSSTADAFLLQGSVRAFEGPNEVCRRDWDRSIPRDFS
Ga0210391_115219171	3300021433	Soil	THMRLSATGNAFQLQGSMRAFEGANEVCRRDWDRSIPRDFL
Ga0210398_115655771	3300021477	Soil	TQMRLSSTGNAFLLQGSLRAFEGANEVCRRDWDRSIPRDFS
Ga0210402_106830153	3300021478	Soil	QMRLSSTGNAFLLKGSLRAWEGANEVCRRDWDRSIPRDFS
Ga0210410_104508221	3300021479	Soil	MRLSCTREALVLRASLRAWEGTSEVCHREWDRSIPRDLV
Ga0212123_104207931	3300022557	Iron-Sulfur Acid Spring	RVRVETVMRLSCTKDAFLLQATLRAHEGANEVCNREWHHSIARDLM
Ga0207671_100403426	3300025914	Corn Rhizosphere	TQMRLSSTRDAFLLQASLRAFEGPNEVCRRDWDRTIPRDFL
Ga0207700_100376341	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	IETQMRLSCTRDVFLLQASLRAWEGGTEVCHRDWDRAIAREFL
Ga0257165_10580022	3300026507	Soil	MRLSCTREVFLLQASLRAWEGANEVCRRDWDRAIARDFL
Ga0208730_10047851	3300027047	Forest Soil	RMSSTGNAFLLQGSLRAWEGANEVCHRDWDRSIPRDFS
Ga0209734_10461251	3300027535	Forest Soil	SSTRNAFLLQGSMRAFEGANEVCRRDWDRSIPRDFL
Ga0209115_10481312	3300027567	Forest Soil	QMRLSSTGDNFLLQGSLRAFEGENEVCRRDWDRSIPRDFS
Ga0209330_10064501	3300027619	Forest Soil	LSATANAFLLQGSLRAFEGANEVCRRDWDRSIPRDFS
Ga0209117_10639021	3300027645	Forest Soil	QIRVETQMRLTSTRDTFLLQGSLRAWEAANEVCRRDWDRSIPRDFL
Ga0207826_10651361	3300027680	Tropical Forest Soil	SSMGNAFLLQGSLRAWEGTNEVCRRDWDRSIPRDFL
Ga0209626_10756691	3300027684	Forest Soil	RLSASRNAFLLQGSMRAFEGANEMCRRDWDRSIPRDFL
Ga0209773_101871451	3300027829	Bog Forest Soil	MRLTSTGSAFLLQGSFRAFEGTNEVCRRDWDRSIPRDFL
Ga0209167_105033041	3300027867	Surface Soil	WQIRVETQLRMSSTRDAFLLQGSLRAWDGANEVCRRDWERSVPRDFM
Ga0209006_105590141	3300027908	Forest Soil	WQIRVETQLRLSATGNTFLLQGSMRAFEGANEMCRRDWDRSIPRDFL
Ga0209526_103405841	3300028047	Forest Soil	QIRVETQLKLTATANAFLLQGSMRAFEGTNEVCRRDWDRSIPRDFL
Ga0268266_121648232	3300028379	Switchgrass Rhizosphere	RLTCTSEAFRLQAALRASEGATEVCHRDWDCTIARDLT
Ga0302219_100136791	3300028747	Palsa	SCTRNAFLLQGSLRAWEGANEMCHREWDRTIARDFL
Ga0265338_109706331	3300028800	Rhizosphere	SCTKDAFLLQTSLRAWEGPDVVCHREWNCSIPRDLM
Ga0307286_101160041	3300028876	Soil	STRDIFLLQGSLRAFEGANEVCRRDWDQSIPRDFL
Ga0311372_124575991	3300030520	Palsa	VGVETQLRMSCTGNAFLLQGSLRAWEGANELCSREWNRTIARDFL
Ga0265763_10007591	3300030763	Soil	LRMSCTADAFLLQGSLRAFEGANEVCRRDWDRSVPRDFL
Ga0318515_100407514	3300031572	Soil	CTRDVFLLLASLRAWEGDDEVCRRDWDRSIARDFL
Ga0310686_1077126571	3300031708	Soil	IRVETQMRRSATSNSFLLQGSLRAFEGENEVCRRDWDRTIPRDFA
Ga0307476_106350791	3300031715	Hardwood Forest Soil	MSSTGNAFLLQGSLRAWEGANEVCHRDWDRSIPRDFS
Ga0310813_103616112	3300031716	Soil	IETSTRLSCTREAFLLQASLRALEGPDEVCRRSWDCTIPRDCA
Ga0307468_1003164931	3300031740	Hardwood Forest Soil	RLSCTRDVFLLQASLRAWEGGTEVCHRDWDRAIAREFL
Ga0306918_111721321	3300031744	Soil	IRVETQLRLSCTHDAFLLQGSLRAWDGANEVCRRDWDRSIPRDFL
Ga0318492_100467743	3300031748	Soil	WHIRIETWMRLSCNRDVFLLQASLRAWDGANEVCRRDWDRAIARNFL
Ga0318535_104396431	3300031764	Soil	HIRIETWMRLSCNRDVFLLQASLRAWDGANEVCRRDWDRAIARNFL
Ga0318546_108621842	3300031771	Soil	LSCNRDVFRLQASLRAWEGANEVCRRDWDRAIARDFL
Ga0318546_109503811	3300031771	Soil	MSRDEWQIRIETQMRLSSSRDAFLLQGGLRACERANERCSRDWDRSVHRDFL
Ga0318529_101007363	3300031792	Soil	IRIETWMRLSCNRDVFLLQASLRAWDGANEVCRRDWDRAIARNFL
Ga0318548_100780542	3300031793	Soil	MSRDAWQVRIETQLRLSCNRDVFLLQASLRAWDEATEVCRRDWDLAIPRDFL
Ga0318550_105100961	3300031797	Soil	QIGVETQMRLSSTSNAFLLQGSLRAWEGANEVCHRDWDRSIPRDFL
Ga0302315_102919213	3300031837	Palsa	TQLRMSCTGNAFLLQGSLRAWEGANELCRREWNRTIARDFL
Ga0318511_104589682	3300031845	Soil	LRLTCNRDVFRLQASLRAWEGANEVCRRDWDRAIARDFL
Ga0306921_111920771	3300031912	Soil	CNRDVFRLQASLRAWEGANEVCRRDWDRAIARDFL
Ga0307479_112348551	3300031962	Hardwood Forest Soil	RLSSTANAFLLQGGLRAWEGANEVCHREWDRSIPRDFM
Ga0318531_102598001	3300031981	Soil	IRIETHLRLSCTGKAFLLQGSLRACEGVKEVCCREWDRTIARDFL
Ga0318531_103414013	3300031981	Soil	NWQIRIETQMRLSSTRNDFLLQGSLRAWEGASEVCHREWGRCIARDFM
Ga0318559_106178831	3300032039	Soil	MSRDEWQIRIETQMRLSSSRDAFLPQGGLRACERANELCSRDWDRSIHRDF
Ga0318506_105716792	3300032052	Soil	QLRLSCNRDVFRLQASLRAWEGANEVCRRDWDRAIARDFL
Ga0318540_103938861	3300032094	Soil	QMRLSSTRNDFLLQGSLRAWEGASEVCHREWGRCIARDFM
Ga0307472_1020938901	3300032205	Hardwood Forest Soil	MRLSCTREVFLLQASLRAWEGADEVCRRDWDRAIARDFL
Ga0335078_106543031	3300032805	Soil	MSSTRDAFLLHGSLRAWEGANEVIHRDWDRSIPRDFS
Ga0335078_127480301	3300032805	Soil	LSSTANAFLLQGSLRAFEGTNEVCRRDWDRSVARDFL
Ga0335073_107684193	3300033134	Soil	DAFLLQGSVRALEGANEVCRRDWDRSIPRDFSISI
Ga0310914_103555483	3300033289	Soil	MRLSCNRDVFLLQASLRAWDGANEVCRRDWDRAIARNFL
Ga0310914_113983481	3300033289	Soil	IRVETQLRMSSTGSAFLLHGSLRAFEGDNEVCRRDWDRSIPRDFL

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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