Metagenome / Metatranscriptome Family F069069

Basic Information
Family ID	F069069
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	41 residues
Representative Sequence	SPRITRFWCAPDRGYIPMRVQQKKDDDVQWTLEIQSLKRE
Number of Associated Samples	115
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	99.19 %
% of genes from short scaffolds (< 2000 bps)	89.52 %
Associated GOLD sequencing projects	111
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.63

Most Common Taxonomy
Group	Bacteria (66.935 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (13.710 % of family members)
Environment Ontology (ENVO)	Unclassified (21.774 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (44.355 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 4.41% β-sheet: 35.29% Coil/Unstructured: 60.29%
Feature Viewer

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Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF00692	dUTPase	39.52
PF06559	DCD	25.81
PF10609	ParA	6.45
PF14890	Intein_splicing	3.23
PF01850	PIN	1.61
PF13614	AAA_31	0.81
PF07992	Pyr_redox_2	0.81
PF00437	T2SSE	0.81
PF04014	MazE_antitoxin	0.81
PF01979	Amidohydro_1	0.81
PF00583	Acetyltransf_1	0.81
PF13450	NAD_binding_8	0.81
PF11769	DUF3313	0.81
PF12840	HTH_20	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG0717	dCTP deaminase	Nucleotide transport and metabolism [F]	65.32
COG0756	dUTP pyrophosphatase (dUTPase)	Defense mechanisms [V]	39.52

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.94 %
Unclassified	root	N/A	33.06 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.94 %
Unclassified	root	N/A	33.06 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.94 %
Unclassified	root	N/A	33.06 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	61.29 %
Unclassified	root	N/A	33.06 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	36.29 %
Unclassified	root	N/A	33.06 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.42 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.06 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	6.45 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	3.23 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	1.61 %
Thiotrichales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales	1.61 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.81 %
Methylococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales	0.81 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.06 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	4.84 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	3.23 %
Thiolinaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiolinaceae	1.61 %
Methylococcaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae	0.81 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	0.81 %
Ectothiorhodospiraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae	0.81 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	0.81 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.06 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	3.23 %
Thiolinea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiolinaceae → Thiolinea	1.61 %
Candidatus Thiosymbion	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Candidatus Thiosymbion	1.61 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	0.81 %
unclassified Ectothiorhodospiraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → unclassified Ectothiorhodospiraceae	0.81 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → environmental samples	0.81 %
Methylobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylobacter	0.81 %
unclassified Chromatiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → unclassified Chromatiaceae	0.81 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.06 %
unclassified Pseudomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas	3.23 %
Thiolinea disciformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiolinaceae → Thiolinea → Thiolinea disciformis	1.61 %
Candidatus Thiosymbion oneisti	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Candidatus Thiosymbion → Candidatus Thiosymbion oneisti	1.61 %
Chromatiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → unclassified Chromatiaceae → Chromatiaceae bacterium	0.81 %
Ectothiorhodospiraceae bacterium WFHF3C12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → unclassified Ectothiorhodospiraceae → Ectothiorhodospiraceae bacterium WFHF3C12	0.81 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	0.81 %
Methylobacter tundripaludum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylobacter → Methylobacter tundripaludum	0.81 %
uncultured Sphingomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → environmental samples → uncultured Sphingomonadaceae bacterium	0.81 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.06 %
Pseudomonas sp. OF001	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. OF001	3.23 %
Thiolinea disciformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiolinaceae → Thiolinea → Thiolinea disciformis	1.61 %
Candidatus Thiosymbion oneisti	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Candidatus Thiosymbion → Candidatus Thiosymbion oneisti	1.61 %
Chromatiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → unclassified Chromatiaceae → Chromatiaceae bacterium	0.81 %
Ectothiorhodospiraceae bacterium WFHF3C12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → unclassified Ectothiorhodospiraceae → Ectothiorhodospiraceae bacterium WFHF3C12	0.81 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	0.81 %
Methylobacter tundripaludum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylobacter → Methylobacter tundripaludum	0.81 %
uncultured Sphingomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → environmental samples → uncultured Sphingomonadaceae bacterium	0.81 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459012\|GOYVCMS02I0B1I	All Organisms → cellular organisms → Bacteria → Proteobacteria	510	Open in IMG/M
3300003505\|JGIcombinedJ51221_10411040	All Organisms → cellular organisms → Bacteria → Proteobacteria	549	Open in IMG/M
3300005093\|Ga0062594_101637570	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	669	Open in IMG/M
3300005175\|Ga0066673_10020939	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3011	Open in IMG/M
3300005341\|Ga0070691_10238855	All Organisms → cellular organisms → Bacteria → Proteobacteria	970	Open in IMG/M
3300005363\|Ga0008090_10029946	All Organisms → cellular organisms → Bacteria → Proteobacteria	1054	Open in IMG/M
3300005434\|Ga0070709_10113295	All Organisms → cellular organisms → Bacteria → Proteobacteria	1826	Open in IMG/M
3300005455\|Ga0070663_100033879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3532	Open in IMG/M
3300005541\|Ga0070733_10355064	All Organisms → cellular organisms → Bacteria → Proteobacteria	972	Open in IMG/M
3300005541\|Ga0070733_10562430	All Organisms → cellular organisms → Bacteria → Proteobacteria	764	Open in IMG/M
3300005541\|Ga0070733_10789173	All Organisms → cellular organisms → Bacteria	638	Open in IMG/M
3300005577\|Ga0068857_101130054	All Organisms → cellular organisms → Bacteria → Proteobacteria	757	Open in IMG/M
3300005993\|Ga0080027_10085078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1174	Open in IMG/M
3300006050\|Ga0075028_100347468	All Organisms → cellular organisms → Bacteria → Proteobacteria	837	Open in IMG/M
3300006176\|Ga0070765_102084132	All Organisms → cellular organisms → Bacteria → Proteobacteria	530	Open in IMG/M
3300006237\|Ga0097621_100334638	All Organisms → cellular organisms → Bacteria → Proteobacteria	1343	Open in IMG/M
3300006354\|Ga0075021_10354231	All Organisms → cellular organisms → Bacteria → Proteobacteria	916	Open in IMG/M
3300006791\|Ga0066653_10137767	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1170	Open in IMG/M
3300009038\|Ga0099829_11563702	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	544	Open in IMG/M
3300009088\|Ga0099830_11455043	Not Available	570	Open in IMG/M
3300009093\|Ga0105240_10707821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1099	Open in IMG/M
3300010049\|Ga0123356_10262016	All Organisms → cellular organisms → Bacteria → Proteobacteria	1813	Open in IMG/M
3300010049\|Ga0123356_10410938	Not Available	1493	Open in IMG/M
3300010361\|Ga0126378_12471203	Not Available	593	Open in IMG/M
3300010371\|Ga0134125_10747013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Candidatus Thiosymbion → Candidatus Thiosymbion oneisti	1077	Open in IMG/M
3300010376\|Ga0126381_100723251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1425	Open in IMG/M
3300010376\|Ga0126381_100833491	All Organisms → cellular organisms → Bacteria	1325	Open in IMG/M
3300010379\|Ga0136449_103546659	Not Available	593	Open in IMG/M
3300011119\|Ga0105246_12420095	Not Available	515	Open in IMG/M
3300011120\|Ga0150983_10790413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Candidatus Thiosymbion → Candidatus Thiosymbion oneisti	1039	Open in IMG/M
3300012205\|Ga0137362_11577906	Not Available	543	Open in IMG/M
3300012206\|Ga0137380_11703238	All Organisms → cellular organisms → Bacteria → Proteobacteria	514	Open in IMG/M
3300012210\|Ga0137378_10329580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1419	Open in IMG/M
3300012469\|Ga0150984_117156907	Not Available	1323	Open in IMG/M
3300012977\|Ga0134087_10408196	Not Available	663	Open in IMG/M
3300013307\|Ga0157372_10965194	Not Available	988	Open in IMG/M
3300014155\|Ga0181524_10511080	Not Available	509	Open in IMG/M
3300014158\|Ga0181521_10407495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → environmental samples → uncultured Sphingomonadaceae bacterium	668	Open in IMG/M
3300014165\|Ga0181523_10390281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiolinaceae → Thiolinea → Thiolinea disciformis	776	Open in IMG/M
3300014325\|Ga0163163_12108466	Not Available	623	Open in IMG/M
3300014499\|Ga0182012_10192308	All Organisms → cellular organisms → Bacteria → Proteobacteria	1437	Open in IMG/M
3300014501\|Ga0182024_12173228	Not Available	608	Open in IMG/M
3300014654\|Ga0181525_10045667	Not Available	2523	Open in IMG/M
3300015051\|Ga0137414_1063997	All Organisms → cellular organisms → Bacteria → Proteobacteria	1202	Open in IMG/M
3300015052\|Ga0137411_1171455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1361	Open in IMG/M
3300015054\|Ga0137420_1494741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	2962	Open in IMG/M
3300016357\|Ga0182032_10286139	All Organisms → cellular organisms → Bacteria → Proteobacteria	1296	Open in IMG/M
3300016387\|Ga0182040_10571717	Not Available	912	Open in IMG/M
3300017937\|Ga0187809_10265418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	624	Open in IMG/M
3300017966\|Ga0187776_10312183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. OF001	1026	Open in IMG/M
3300017972\|Ga0187781_10261255	All Organisms → cellular organisms → Bacteria → Proteobacteria	1226	Open in IMG/M
3300017974\|Ga0187777_10361184	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1000	Open in IMG/M
3300017975\|Ga0187782_10931843	Not Available	674	Open in IMG/M
3300018007\|Ga0187805_10436251	Not Available	610	Open in IMG/M
3300018008\|Ga0187888_1285557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Thiotrichales → Thiolinaceae → Thiolinea → Thiolinea disciformis	637	Open in IMG/M
3300018058\|Ga0187766_10398118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	910	Open in IMG/M
3300018482\|Ga0066669_10753086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Methylococcales → Methylococcaceae → Methylobacter → Methylobacter tundripaludum	860	Open in IMG/M
3300020582\|Ga0210395_11190022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	560	Open in IMG/M
3300020583\|Ga0210401_10124370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2418	Open in IMG/M
3300021180\|Ga0210396_10875099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	767	Open in IMG/M
3300021358\|Ga0213873_10147845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	706	Open in IMG/M
3300021420\|Ga0210394_10646661	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	928	Open in IMG/M
3300021477\|Ga0210398_10472049	All Organisms → cellular organisms → Bacteria	1022	Open in IMG/M
3300021478\|Ga0210402_10430185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	1226	Open in IMG/M
3300022515\|Ga0224546_1030506	Not Available	522	Open in IMG/M
3300023268\|Ga0247765_1099044	Not Available	616	Open in IMG/M
3300024290\|Ga0247667_1066495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	665	Open in IMG/M
3300024295\|Ga0224556_1015737	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1935	Open in IMG/M
3300025505\|Ga0207929_1106786	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300025898\|Ga0207692_10576108	Not Available	721	Open in IMG/M
3300025913\|Ga0207695_10524344	Not Available	1066	Open in IMG/M
3300025914\|Ga0207671_10753354	Not Available	773	Open in IMG/M
3300025915\|Ga0207693_10650301	Not Available	819	Open in IMG/M
3300025926\|Ga0207659_11760436	Not Available	527	Open in IMG/M
3300025941\|Ga0207711_11203597	Not Available	699	Open in IMG/M
3300025986\|Ga0207658_10973758	Not Available	773	Open in IMG/M
3300026078\|Ga0207702_10417330	Not Available	1297	Open in IMG/M
3300026078\|Ga0207702_10480711	Not Available	1209	Open in IMG/M
3300026305\|Ga0209688_1117646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → unclassified Chromatiaceae → Chromatiaceae bacterium	505	Open in IMG/M
3300026959\|Ga0207852_1034030	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	520	Open in IMG/M
3300026959\|Ga0207852_1036338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	502	Open in IMG/M
3300027167\|Ga0208096_103766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	754	Open in IMG/M
3300027297\|Ga0208241_1072106	Not Available	553	Open in IMG/M
3300027548\|Ga0209523_1046850	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	882	Open in IMG/M
3300027853\|Ga0209274_10519781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	616	Open in IMG/M
3300027867\|Ga0209167_10027914	All Organisms → cellular organisms → Bacteria → Proteobacteria	2703	Open in IMG/M
3300027894\|Ga0209068_10428983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. OF001	756	Open in IMG/M
3300028047\|Ga0209526_10307127	All Organisms → cellular organisms → Bacteria	1072	Open in IMG/M
3300028047\|Ga0209526_10454982	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. OF001	841	Open in IMG/M
3300028047\|Ga0209526_10710282	Not Available	632	Open in IMG/M
3300028558\|Ga0265326_10031464	All Organisms → cellular organisms → Bacteria → Proteobacteria	1512	Open in IMG/M
3300028792\|Ga0307504_10351845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	568	Open in IMG/M
3300028800\|Ga0265338_11007269	Not Available	564	Open in IMG/M
3300028906\|Ga0308309_11622598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	550	Open in IMG/M
3300029951\|Ga0311371_10463382	All Organisms → cellular organisms → Bacteria → Proteobacteria	1690	Open in IMG/M
3300030053\|Ga0302177_10184404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1158	Open in IMG/M
3300030490\|Ga0302184_10030323	All Organisms → cellular organisms → Bacteria → Proteobacteria	2803	Open in IMG/M
3300031028\|Ga0302180_10240389	Not Available	956	Open in IMG/M
3300031057\|Ga0170834_107406538	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	828	Open in IMG/M
3300031090\|Ga0265760_10138631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → unclassified Pseudomonas → Pseudomonas sp. OF001	791	Open in IMG/M
3300031231\|Ga0170824_103927780	Not Available	846	Open in IMG/M
3300031234\|Ga0302325_12129832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	686	Open in IMG/M
3300031236\|Ga0302324_101428719	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300031469\|Ga0170819_17894371	Not Available	637	Open in IMG/M
3300031543\|Ga0318516_10052110	All Organisms → cellular organisms → Bacteria → Proteobacteria	2228	Open in IMG/M
3300031573\|Ga0310915_11085277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	556	Open in IMG/M
3300031708\|Ga0310686_112084147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1188	Open in IMG/M
3300031736\|Ga0318501_10350290	Not Available	793	Open in IMG/M
3300031736\|Ga0318501_10382537	Not Available	759	Open in IMG/M
3300031744\|Ga0306918_10075883	All Organisms → cellular organisms → Bacteria → Proteobacteria	2324	Open in IMG/M
3300031753\|Ga0307477_10303656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1101	Open in IMG/M
3300031754\|Ga0307475_11530015	All Organisms → cellular organisms → Bacteria → Proteobacteria	511	Open in IMG/M
3300031777\|Ga0318543_10174181	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300031799\|Ga0318565_10026982	All Organisms → cellular organisms → Bacteria → Proteobacteria	2573	Open in IMG/M
3300031819\|Ga0318568_10069173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2070	Open in IMG/M
3300031945\|Ga0310913_11126181	Not Available	548	Open in IMG/M
3300031954\|Ga0306926_12293799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae → unclassified Ectothiorhodospiraceae → Ectothiorhodospiraceae bacterium WFHF3C12	598	Open in IMG/M
3300031959\|Ga0318530_10049365	All Organisms → cellular organisms → Bacteria → Proteobacteria	1579	Open in IMG/M
3300031962\|Ga0307479_10760502	Not Available	946	Open in IMG/M
3300032039\|Ga0318559_10318880	Not Available	722	Open in IMG/M
3300032205\|Ga0307472_101369089	Not Available	685	Open in IMG/M
3300032770\|Ga0335085_10834087	Not Available	1011	Open in IMG/M
3300032895\|Ga0335074_10174710	Not Available	2670	Open in IMG/M
3300032955\|Ga0335076_10014882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	7816	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	83.87%
Host-Associated	Host-Associated	16.13%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.81%
Plants	Host-Associated → Plants	14.52%
Aquatic	Environmental → Aquatic	8.06%
Arthropoda	Host-Associated → Arthropoda	1.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	68.55%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.48%
Peat	Environmental → Terrestrial → Peat	6.45%
Freshwater	Environmental → Aquatic → Freshwater	5.65%
Sediment	Environmental → Aquatic → Sediment	2.42%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.42%
Digestive System	Host-Associated → Arthropoda → Digestive System	1.61%
Roots	Host-Associated → Plants → Roots	1.61%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	45.16%
Loam	Environmental → Terrestrial → Soil → Loam	14.52%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	8.87%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.45%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.65%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.42%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.42%
Gut	Host-Associated → Arthropoda → Digestive System → Gut	1.61%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	1.61%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	22.58%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.94%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	10.48%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	6.45%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.84%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	4.03%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.23%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.23%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.42%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	2.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.42%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.61%
Unclassified	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified	1.61%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	1.61%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.81%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.81%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.81%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.81%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.71%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.45%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.45%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	4.84%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	4.03%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	3.23%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.23%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.23%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.23%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.42%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.42%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.42%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.42%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.61%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	1.61%
Termite Gut	Host-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut	1.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.61%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.81%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.81%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.81%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.81%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.81%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.81%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.81%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.81%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.81%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.81%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.81%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459012	Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO1O1 lysis Rhizosphere grass	Environmental	Open in IMG/M
3300003505	Forest soil microbial communities from Harvard Forest LTER, USA - Combined assembly of forest soil metaG samples (ASSEMBLY_DATE=20140924)	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006354	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300010049	Embiratermes neotenicus P3 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P3	Host-Associated	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014155	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_60_metaG	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014654	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaG	Environmental	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015052	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015054	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018008	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_40	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300022515	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P2 1-5	Environmental	Open in IMG/M
3300023268	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L106-311C-6	Environmental	Open in IMG/M
3300024290	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK08	Environmental	Open in IMG/M
3300024295	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 1-5	Environmental	Open in IMG/M
3300025505	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025913	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026305	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_142 (SPAdes)	Environmental	Open in IMG/M
3300026959	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 3 (SPAdes)	Environmental	Open in IMG/M
3300027167	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF034 (SPAdes)	Environmental	Open in IMG/M
3300027297	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF047 (SPAdes)	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027894	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028558	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG	Host-Associated	Open in IMG/M
3300028792	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_S	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030053	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E1_2	Environmental	Open in IMG/M
3300030490	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031090	Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031236	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.63
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.63
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069069

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
N56_01575070	2170459012	Grass Soil	RITRFWCAPDRGYVPMRVEQKKGDDVQWTMEIKSFTRD
JGIcombinedJ51221_104110402	3300003505	Forest Soil	SRRANSPRVNRYWCAPARGFVPLRAQQKKGDDVEWTMEIQSLTRD*
Ga0062594_1016375701	3300005093	Soil	YSPRVTRFWCAPDKGYVPMQVQQKKGNDVQWTLQIQSLTR*
Ga0066673_100209396	3300005175	Soil	SPRVTRFWCAPWRGYVPLRVQQKRGDDIEWTMEIQSLTRE*
Ga0070691_102388552	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	IYGSQKEGSPRVTRFWCAPSHGFIPMKVEQKRKDEIEWTMLIESVERD*
Ga0008090_100299463	3300005363	Tropical Rainforest Soil	SPRITRFWCAPDRGYIPMRVQQKKGEDVQWTLEIQSLKRE*
Ga0070709_101132951	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	YSPRTTRFWCAPGKGFIPMKVEQTKGDDVQWTLQIESLKR*
Ga0070663_1000338794	3300005455	Corn Rhizosphere	GAQKVGSPRITRFWCAPSQGFVPMRVEQKKDDEVQWTMQLQSVKRDQS*
Ga0070733_103550641	3300005541	Surface Soil	TRFWCAPSMGYLPLRIEQKRTDSVEWSMDIRSVRRD*
Ga0070733_105624301	3300005541	Surface Soil	SPRITRFWCAPDRGYIPMKVEQKKGDDVQWTLQIQSLTRN*
Ga0070733_107891732	3300005541	Surface Soil	RFWCAPARGYVPVRVQQKRLDSVEWTMEIETLQAD*
Ga0068857_1011300541	3300005577	Corn Rhizosphere	GSQKEGSPRVTRFWCAPSRGFIPMKVEQKRKDEIEWTMLIESVERD*
Ga0080027_100850782	3300005993	Prmafrost Soil	PRITRFWCAPERGYVPMRVEQKKGNDVQWTMEVKSFTRD*
Ga0075028_1003474682	3300006050	Watersheds	AYSPRVNRYWCAPDRGYVPLRVQQKRGDEVEWTMEIQSLKRE*
Ga0070765_1020841321	3300006176	Soil	ANSPRVNSYWCAPDHGYIPLRVQQKRANDVEWTMEIQSLKRE*
Ga0097621_1003346381	3300006237	Miscanthus Rhizosphere	FWCAPSRGYIPMRVEQKKDDDVQWTMQLQSVTRG*
Ga0075021_103542313	3300006354	Watersheds	RITRFWCAPSLGFIPLRVEQKKAEDVQWAMQVQTVKR*
Ga0066653_101377671	3300006791	Soil	IIYRSERENSPRVTRFWCAPWRGYVPLRVQQKRGDDIEWTMEIQSLTRE*
Ga0099829_115637021	3300009038	Vadose Zone Soil	VTRFWCAPWRGDVPMRVEQKRGDDIEWTMEIRSLSRE*
Ga0099830_114550431	3300009088	Vadose Zone Soil	SEREGSPRVTRFWCAPSRGYVPMRVEQKRGDDIEWTMEIRSLSRE*
Ga0105240_107078212	3300009093	Corn Rhizosphere	SPRVTRFWCAPSLGYIPLRVEQKKGKDDIEWTMQVQSVKREP*
Ga0123356_102620161	3300010049	Termite Gut	RFWCAPDRGFIPLRVQQKRGDEVQWTLEIQSLNRP*
Ga0123356_104109382	3300010049	Termite Gut	YSPRTTRFWCAPERGYIPVRVEQTKDQSVEWTMQIQSLKRD*
Ga0126378_124712032	3300010361	Tropical Forest Soil	RITRFWCAPGRGYVPLKVEQTRGDEVQWTMEIQSLTRAP*
Ga0134125_107470131	3300010371	Terrestrial Soil	RVTRFWCAPSRGYIPMRVEQKKDDDVQWTMQMQSVTRE*
Ga0126381_1007232511	3300010376	Tropical Forest Soil	SPRVTRFWCAPARGYIPLKVEQTRGDDVQWTMEIERLTRE*
Ga0126381_1008334912	3300010376	Tropical Forest Soil	VNRYWLAPDRGYIPMRVQQKRGDDVQWTMEIRSLKRQ*
Ga0136449_1035466591	3300010379	Peatlands Soil	PGSPRITRFWCAPDRGYIPLKVEQTRGDEVQWTLEIESLSRP*
Ga0105246_124200952	3300011119	Miscanthus Rhizosphere	RVTRFWCAPDKGYVPMQVQQKKGNDVQWTLQIQSLTR*
Ga0150983_107904132	3300011120	Forest Soil	AGSPRITRFWCAPDRGYIPLKVEQTRGDEVQWTLEIESLSRP*
Ga0137362_115779062	3300012205	Vadose Zone Soil	VIYRSEREGSPRVTRFWCAPWRGYVPMRVEQKRGDDIEWTMEIRSLSRE*
Ga0137380_117032382	3300012206	Vadose Zone Soil	GSPRVTRFWCAPSRGYIPMRVEQKKDDEVQWAMQVETVKRD*
Ga0137378_103295801	3300012210	Vadose Zone Soil	RVTRFWCAPSRGYIPLRVEQKKGDEVQWAMQVQSAKRD*
Ga0150984_1171569072	3300012469	Avena Fatua Rhizosphere	RFWCAPSRGYIPMRVEQKKDDEVQWTMQLQSVTRE*
Ga0134087_104081962	3300012977	Grasslands Soil	VTRFWCAPSRGYIPMRVEQKKGDDVQWTMQLQSVTRE*
Ga0157372_109651941	3300013307	Corn Rhizosphere	RFWCAPALGYIPMRVQQKRKDDVEWTMEVQSVKRD*
Ga0181524_105110802	3300014155	Bog	TRFWCAPSEGYLPMRVEQKRIDSVEWTMEIRSLKRG*
Ga0181521_104074952	3300014158	Bog	QHPGSPRITRFWCAPSKGYVPMRVQQKRIDSVEWTMEIETLKSQ*
Ga0181523_103902811	3300014165	Bog	QHEGSPRVTRFWCAPSEGYLPMRVEQKRIDSVEWTMEIRSLKRG*
Ga0163163_121084661	3300014325	Switchgrass Rhizosphere	QYSPRVTRFWCAPSLGYIPLRVEQKRKDDVEWTMQVQSVKREP*
Ga0182012_101923083	3300014499	Bog	HPGSPRVTRFWCAPSRGYLPMRVEQKRINSVEWTMDIRSLQRD*
Ga0182024_121732282	3300014501	Permafrost	RSEKQNSPRTTRFWCAPSLGYIPLRVEQKRKDDVEWTMQVQSVKRE*
Ga0181525_100456671	3300014654	Bog	RVTRFWCAPSKGFVPVRVQQKRIDSVEWAMEIESLEAP*
Ga0137414_10639973	3300015051	Vadose Zone Soil	SSQKEGSPRVTQFWCAPSLGYIPLRVQQRRDHQIEWTMQIQSLKRD*
Ga0137411_11714553	3300015052	Vadose Zone Soil	EGSPRVTRFWCAPWRGHVPMRVEQKRGDEIEWTMEIRSLSRE*
Ga0137420_14947418	3300015054	Vadose Zone Soil	PRVTRFWCAPWRGYVPMRVEQKRGDEIEWTMEIRSLSRE*
Ga0182032_102861391	3300016357	Soil	KKNSPRITRFWCAPDRGYIPLRVQQKKDDDVQWTLEIQSLKRQ
Ga0182040_105717171	3300016387	Soil	PRVTRFWCAPDRGFIPMKVQQTKDGDVQWTMEIQSLRR
Ga0187809_102654181	3300017937	Freshwater Sediment	PRITRFWCAPERGYIPMKVEQKKDDDVQWTLEIQSLKRQ
Ga0187776_103121833	3300017966	Tropical Peatland	NSPHVNRYWCAPDRGYIPVRVQQKRGDDVQWTMEIESLRRE
Ga0187781_102612554	3300017972	Tropical Peatland	SPRINSYWCAPLQGYIPVRVQQKRGDDVEWTMEIQSLKRE
Ga0187777_103611843	3300017974	Tropical Peatland	AQKAGSPRITRFWCAPERGYVPMKVEQTRGDEVQWTMEIESLTRAP
Ga0187782_109318431	3300017975	Tropical Peatland	RPGSQRANRYWCAPDRGYIPLRAEQKVDDDIQWTMNIESLKRD
Ga0187805_104362511	3300018007	Freshwater Sediment	TRFWCAPERGYIPLKVEQTRGDDVQWTMEIESLTR
Ga0187888_12855571	3300018008	Peatland	RVTRFWCAPSEGYLPMRVEQKRIDSVEWTMEIRSLKRG
Ga0187766_103981182	3300018058	Tropical Peatland	NRYWCAPDRGYIPLRVQQKRGDEVQWTMEIRTLKRE
Ga0066669_107530863	3300018482	Grasslands Soil	SPRVTRFWCAPWRGYVPLRVQQKRGDDIEWTMEIQSLTRE
Ga0210395_111900221	3300020582	Soil	TSRKANSPRVNSYWCAPDQGYIPLRVQQKRADEVEWTMEILSLKRE
Ga0210401_101243703	3300020583	Soil	QKTYSPRITRFWCAPDRGYIPMKVEQKKGDDVQWTLQIQGLTRN
Ga0210396_108750992	3300021180	Soil	RKNSPHVNRYWCAPERGYIPMRVEQKRGDEVQWAMEIQSLKRQ
Ga0213873_101478451	3300021358	Rhizosphere	RATRFWCAPERGYVPVKVEQAIGQDVQWTLLIQSLKR
Ga0210394_106466612	3300021420	Soil	EGSPRVTRFWCAPDRGYIPMRVEQTRDKDVEWTMQIRSLKRE
Ga0210398_104720491	3300021477	Soil	RVTRFWCSPERGYVPIKVEQTKGSDVQWTLEIQSLTR
Ga0210402_104301851	3300021478	Soil	NSPRATRFWCAPSRGYIPLKVEQKRGDDVEWAMEITSLKRE
Ga0224546_10305061	3300022515	Soil	VVYTSQKANSPRVNSYWCAPDRGYIPMRVQQKRGEEVEWTMEIESVKRQ
Ga0247765_10990441	3300023268	Plant Litter	RVTRFWCAPSRGFIPMRVEQKKGGDVQWTMQLQAVTRE
Ga0247667_10664951	3300024290	Soil	YRAQKKYSPRTTRFWCAPDKGFIPMKVEQTKGDEVQWTLQIESLKR
Ga0224556_10157371	3300024295	Soil	PRITRFWCAPEHGYVPLKVEQRIGEDVQWSMEIMSLTGG
Ga0207929_11067862	3300025505	Arctic Peat Soil	RVTRFWCAPSRGYVPVRVEQKRIDSVEWTLEIQTLAGD
Ga0207692_105761082	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	YSPRVTRFWCAPDKGYVPMQVQQKKGNDVQWTLQIQSLTR
Ga0207695_105243442	3300025913	Corn Rhizosphere	SPRVTRFWCAPSLGYIPLRVEQKKGKDDIEWTMQVQSVKREP
Ga0207671_107533542	3300025914	Corn Rhizosphere	FKSEKQYSPRVTRFWCAPSLGYIPLRVEQKKGKDDIEWTMQVQSVKREP
Ga0207693_106503012	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	QKKYSPRITSFWCAPDRGYIPMKVQQKKGEDVQWTLEIQSLTRQ
Ga0207659_117604361	3300025926	Miscanthus Rhizosphere	RSEKQYSPRVTRFWCAPSLGYIPLRVQQKRKDDVEWTMQVQSVKREQ
Ga0207711_112035972	3300025941	Switchgrass Rhizosphere	PRVTRFWCAPSRGFIPMRVEQKKDDEVQWTMQVQSVTRG
Ga0207658_109737582	3300025986	Switchgrass Rhizosphere	RVTRFWCAPSRGYIPVRIEQTKGDDVQWTMQVQSVKRD
Ga0207702_104173301	3300026078	Corn Rhizosphere	RFWCAPSRGYIPMRVEQKKDDDVQWTMQVQSVTRG
Ga0207702_104807112	3300026078	Corn Rhizosphere	TPIGSIATIVYASQKEGSPRVTRFWCAPARGFIPMKVEQKRKDEVEWTLLIESVQRE
Ga0209688_11176462	3300026305	Soil	SPRVTRFWCAPWRGYVPLRVQQKRGEDVEWTMEIQSLTRE
Ga0207852_10340302	3300026959	Tropical Forest Soil	KAHSPRITRFWCAPDRGYVPMKVEQTKGDDVQWTMEIRSLKRQ
Ga0207852_10363382	3300026959	Tropical Forest Soil	SQRPNSARINRYWCAPERGQIPMRVQQKVDDDVQWTMEIRSFKRE
Ga0208096_1037662	3300027167	Forest Soil	YSSQKAYSPRINSYWCAPDRGYIPMRVQQKRGDDVEWTMEIQSLKRE
Ga0208241_10721061	3300027297	Forest Soil	PRITRFWCAPDRGYIPMKVEQKKGDDVQWTLQIQSVTRN
Ga0209523_10468503	3300027548	Forest Soil	TVVYRAQKAGSPRVTRFWCAPERGYIPLRVEQTRGDDVQWTMEIQSLRRE
Ga0209274_105197811	3300027853	Soil	ANSPRVNSYWCAPEQGYLPLRVQQKRADEVEWTMEILSLKRE
Ga0209167_100279144	3300027867	Surface Soil	FQSHKQGSPRVNLFWCAPARNYIPLRVEQRRKGEVQWTMQIESLTLGPG
Ga0209068_104289832	3300027894	Watersheds	PRITRFWCAPSLGFIPLRVEQKKAEDVQWAMQVQTVKR
Ga0209526_103071273	3300028047	Forest Soil	RFWCAPTKGYVPMRVQQKRIDSVEWTMEIESFKTD
Ga0209526_104549821	3300028047	Forest Soil	RFWCAPARGYIPMRVEQKRGDDIEWSMEIRSLKRE
Ga0209526_107102822	3300028047	Forest Soil	RFWCAPARGYIPMRVEQKRGDDIEWSMEIRSLSRE
Ga0265326_100314643	3300028558	Rhizosphere	RITRFWCAPARGYVPLKVEQRIGNDVQWSMEIMRLTGG
Ga0307504_103518451	3300028792	Soil	PRVTRFWCAPWRGYVPMRVEQKRGDDIEWTMEIRSLSRE
Ga0265338_110072691	3300028800	Rhizosphere	RFWCAPAEGYIPMKVEQTKGDDVQWTLQIQSLKRD
Ga0308309_116225981	3300028906	Soil	VNYTSRKANSPRVNSYWCAPDHGYIPLRVQQKRANEVEWTMEIQSLKRE
Ga0311371_104633821	3300029951	Palsa	SEKQYSPRITRFWCAPSLGYIPLRVQQTRNDDVEWTMQVQSVKRE
Ga0302177_101844041	3300030053	Palsa	AYSPRVTRFWCAPGNGYIPMKVEQTKGDDVQWTLQIQSLKRD
Ga0302184_100303234	3300030490	Palsa	RFWCAPSKGFVPVRVQQKRIDSVEWAMEIQSLEAP
Ga0302180_102403891	3300031028	Palsa	QKAYSPRVTRFWCAPGNGYIPMKVEQTKGDDVQWTLQIQSLKRD
Ga0170834_1074065382	3300031057	Forest Soil	VYRAQKANSPRITRFWCAPGRGYIPLKVEQTKGDDVQWTMEIQSLERH
Ga0265760_101386311	3300031090	Soil	RKANSPRVNSYWCAPEQGYLPLRVQQKRADEVEWTMEILSLKRE
Ga0170824_1039277801	3300031231	Forest Soil	RTTRFWCAPSLGYIPLRVQQTRKDDVEWTMQVKSVKREQ
Ga0302325_121298321	3300031234	Palsa	SQRANSPRFNRYWCAPDRGYIPMRVQQKRGDEVQWTMEIESVKRQ
Ga0302324_1014287191	3300031236	Palsa	RFWCAPSKGYVPLRVEQKRLDEVEWTMEIETLKAQ
Ga0170819_178943711	3300031469	Forest Soil	RSQKTGSPRVTRFWCAPSRGYIPMRVEQKKGDDVQWTMQVQSVKRD
Ga0318516_100521104	3300031543	Soil	KKNSPRITRFWCAPDRGYVPMRVQQKKDEDVQWTLEIQSLKRE
Ga0310915_110852771	3300031573	Soil	KSQKKYSPRITRFWCAPDRGYVPMRVQQKKDDDVQWTLEIQSLKRE
Ga0310686_1120841471	3300031708	Soil	REGSPRVTRFWCAPDRGYIPMRVEQTRGKDVEWTMEIRSLKRE
Ga0318501_103502901	3300031736	Soil	RFWCAPDRGYIPLRVQQKKDDDVQWTLEIQSLKRQ
Ga0318501_103825371	3300031736	Soil	SPRITRFWCAPDRGYIPMRVQQKKDDDVQWTLEIQSLKRE
Ga0306918_100758831	3300031744	Soil	SPRITRFWCAPDRGYVPMRVQQRKGDDVQWTLEIQSLKRE
Ga0307477_103036561	3300031753	Hardwood Forest Soil	RENSPRVTRFWCAPWRGYVPLRVEQKRGDEIEWTMEIKSLSRE
Ga0307475_115300152	3300031754	Hardwood Forest Soil	GAIATVVYRAQKAGSPRVTRFWCAPERGYIPLRVEQTRGDDVQWSMEIERLRRE
Ga0318543_101741811	3300031777	Soil	KYSPRITRFWCAPDRGYVPMRVQQKRDEDVQWTLEIASLTRR
Ga0318565_100269821	3300031799	Soil	NSPRITRFWCAPDRGYVPMRVQQKKDEDVQWTLEIQSLKRE
Ga0318568_100691734	3300031819	Soil	NSPRITRFWCAPDHGYIPMRVQQKKDDDVQWTLEIQSLQRQ
Ga0310913_111261811	3300031945	Soil	IFSSQRVNSPHVNRYWLAPDRGYIPMRVQQKRDDDVQWTMEIQSLQR
Ga0306926_122937991	3300031954	Soil	VATVVYTSQRAGSPRITRFWCAPDKGFIPLRVEQRRQNDVEWRMDIQSLNRP
Ga0318530_100493653	3300031959	Soil	KNSPRITRFWCAPDRGYVPMRVQQKKDEDVQWTLEIQSLKRE
Ga0307479_107605022	3300031962	Hardwood Forest Soil	TRFWCAPSLGYIPVRVEQTKGQRDVEWTMQVQSVKREP
Ga0318559_103188802	3300032039	Soil	QKKYSPRITRFWCAPDRGYIPMRVQQKKDDDVQWTLEIQSLKRE
Ga0307472_1013690892	3300032205	Hardwood Forest Soil	TRFWCAPHQGYVPVKVEQTKGDEVQWTMEIRSLSRQ
Ga0335085_108340872	3300032770	Soil	SPRITSFWCAPDRGYIPMKVQQKKGDDVQWTLEIQSLTRQ
Ga0335074_101747104	3300032895	Soil	AHHTGSPRTTRFWCAPSLGYVPLRVQQKRLNEVEWTLQIRSLQRG
Ga0335076_100148821	3300032955	Soil	ITRFWCASDRGFIPVRVQQKRDDDVQWTLEIQSLSRQ

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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