NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F069063

Metagenome / Metatranscriptome Family F069063

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F069063
Family Type Metagenome / Metatranscriptome
Number of Sequences 124
Average Sequence Length 94 residues
Representative Sequence MSDEQDVAESVDEEMVGTDAVTSDEVGAFDDAPDRPVGLPFADADVTDESLAERVAREIPDEVDDPDVPLRLVEPDVLVDSDLLEQIDEDGDVAEPD
Number of Associated Samples 97
Number of Associated Scaffolds 124

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 15.32 %
% of genes near scaffold ends (potentially truncated) 37.90 %
% of genes from short scaffolds (< 2000 bps) 97.58 %
Associated GOLD sequencing projects 92
AlphaFold2 3D model prediction Yes
3D model pTM-score0.23

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Unclassified (62.903 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(28.226 % of family members)
Environment Ontology (ENVO) Unclassified
(33.871 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(50.000 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 24.00%    β-sheet: 1.60%    Coil/Unstructured: 74.40%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.23
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 124 Family Scaffolds
PF02882THF_DHG_CYH_C 11.29
PF06224HTH_42 4.84
PF04978DUF664 4.03
PF02585PIG-L 4.03
PF04248NTP_transf_9 3.23
PF08327AHSA1 2.42
PF02567PhzC-PhzF 1.61
PF13466STAS_2 1.61
PF00391PEP-utilizers 1.61
PF00300His_Phos_1 1.61
PF03404Mo-co_dimer 0.81
PF00378ECH_1 0.81
PF00356LacI 0.81
PF05901Excalibur 0.81
PF00005ABC_tran 0.81
PF00144Beta-lactamase 0.81
PF00296Bac_luciferase 0.81
PF07690MFS_1 0.81
PF10009DUF2252 0.81
PF03928HbpS-like 0.81
PF01326PPDK_N 0.81
PF13545HTH_Crp_2 0.81
PF01593Amino_oxidase 0.81
PF01243Putative_PNPOx 0.81
PF04542Sigma70_r2 0.81
PF00903Glyoxalase 0.81
PF07859Abhydrolase_3 0.81
PF00534Glycos_transf_1 0.81
PF13561adh_short_C2 0.81
PF00106adh_short 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 124 Family Scaffolds
COG01905,10-methylene-tetrahydrofolate dehydrogenase/Methenyl tetrahydrofolate cyclohydrolaseCoenzyme transport and metabolism [H] 11.29
COG0686Alanine dehydrogenase (includes sporulation protein SpoVN)Amino acid transport and metabolism [E] 11.29
COG3214DNA glycosylase YcaQ, repair of DNA interstrand crosslinksReplication, recombination and repair [L] 4.84
COG2120N-acetylglucosaminyl deacetylase, LmbE familyCarbohydrate transport and metabolism [G] 4.03
COG2343Uncharacterized conserved protein, DUF427 familyFunction unknown [S] 3.23
COG0384Predicted epimerase YddE/YHI9, PhzF superfamilyGeneral function prediction only [R] 1.61
COG0568DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)Transcription [K] 0.81
COG0574Phosphoenolpyruvate synthase/pyruvate phosphate dikinaseCarbohydrate transport and metabolism [G] 0.81
COG0657Acetyl esterase/lipaseLipid transport and metabolism [I] 0.81
COG1191DNA-directed RNA polymerase specialized sigma subunitTranscription [K] 0.81
COG1595DNA-directed RNA polymerase specialized sigma subunit, sigma24 familyTranscription [K] 0.81
COG1680CubicO group peptidase, beta-lactamase class C familyDefense mechanisms [V] 0.81
COG1686D-alanyl-D-alanine carboxypeptidaseCell wall/membrane/envelope biogenesis [M] 0.81
COG2141Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)Coenzyme transport and metabolism [H] 0.81
COG2367Beta-lactamase class ADefense mechanisms [V] 0.81
COG4941Predicted RNA polymerase sigma factor, contains C-terminal TPR domainTranscription [K] 0.81


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A62.90 %
All OrganismsrootAll Organisms37.10 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000956|JGI10216J12902_107747565Not Available962Open in IMG/M
3300002568|C688J35102_120100000Not Available879Open in IMG/M
3300004081|Ga0063454_102060490All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. ICBG1142506Open in IMG/M
3300004114|Ga0062593_102738839Not Available562Open in IMG/M
3300004157|Ga0062590_100175353Not Available1511Open in IMG/M
3300005093|Ga0062594_101346760All Organisms → cellular organisms → Bacteria720Open in IMG/M
3300005093|Ga0062594_102860769All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Halobacteria → Haloferacales → Halorubraceae → Halorubrum → Halorubrum distributum group → Halorubrum arcis537Open in IMG/M
3300005327|Ga0070658_11848976All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia522Open in IMG/M
3300005331|Ga0070670_101613229Not Available596Open in IMG/M
3300005338|Ga0068868_101574717All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium617Open in IMG/M
3300005340|Ga0070689_101564232All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria598Open in IMG/M
3300005364|Ga0070673_101668028All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia603Open in IMG/M
3300005441|Ga0070700_101308667Not Available609Open in IMG/M
3300005471|Ga0070698_101058149Not Available759Open in IMG/M
3300005544|Ga0070686_100257795All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1277Open in IMG/M
3300005548|Ga0070665_101942225Not Available594Open in IMG/M
3300005615|Ga0070702_101347109All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sulfitobacter → Sulfitobacter noctilucae581Open in IMG/M
3300005843|Ga0068860_100672295Not Available1044Open in IMG/M
3300005843|Ga0068860_101228420Not Available770Open in IMG/M
3300006038|Ga0075365_10921140Not Available616Open in IMG/M
3300006048|Ga0075363_100218588Not Available1092Open in IMG/M
3300006178|Ga0075367_10191038All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1278Open in IMG/M
3300006358|Ga0068871_101702156Not Available598Open in IMG/M
3300006576|Ga0074047_11382160Not Available606Open in IMG/M
3300009098|Ga0105245_10828865Not Available964Open in IMG/M
3300009098|Ga0105245_11492098Not Available727Open in IMG/M
3300009148|Ga0105243_12909251Not Available519Open in IMG/M
3300009177|Ga0105248_13273283All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia515Open in IMG/M
3300009551|Ga0105238_10711309Not Available1017Open in IMG/M
3300009610|Ga0105340_1119876All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1068Open in IMG/M
3300010147|Ga0126319_1571034Not Available714Open in IMG/M
3300010154|Ga0127503_11124210All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300010375|Ga0105239_12684731Not Available581Open in IMG/M
3300010400|Ga0134122_11303091Not Available734Open in IMG/M
3300011003|Ga0138514_100039576Not Available923Open in IMG/M
3300011119|Ga0105246_11350022All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → unclassified Acidimicrobiales → Acidimicrobiales bacterium663Open in IMG/M
3300011442|Ga0137437_1170395Not Available755Open in IMG/M
3300011445|Ga0137427_10408521Not Available564Open in IMG/M
3300012212|Ga0150985_105989049All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Thermocrispum → Thermocrispum agreste694Open in IMG/M
3300012212|Ga0150985_113367715Not Available502Open in IMG/M
3300012212|Ga0150985_122910231All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria682Open in IMG/M
3300012469|Ga0150984_100301710All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. ICBG1142559Open in IMG/M
3300012469|Ga0150984_101465894All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1228Open in IMG/M
3300012469|Ga0150984_121433339Not Available523Open in IMG/M
3300012469|Ga0150984_121982020All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300012882|Ga0157304_1089760Not Available543Open in IMG/M
3300012955|Ga0164298_10985046Not Available621Open in IMG/M
3300012957|Ga0164303_10673579Not Available693Open in IMG/M
3300012961|Ga0164302_10648766Not Available773Open in IMG/M
3300012984|Ga0164309_10753736Not Available779Open in IMG/M
3300012984|Ga0164309_11018342Not Available684Open in IMG/M
3300012984|Ga0164309_11602525All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Pseudonocardia → unclassified Pseudonocardia → Pseudonocardia sp. ICBG1142558Open in IMG/M
3300012985|Ga0164308_10023305All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3653Open in IMG/M
3300012985|Ga0164308_10113664All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Desertimonas → Desertimonas flava1932Open in IMG/M
3300012985|Ga0164308_10960311Not Available757Open in IMG/M
3300012987|Ga0164307_10183657All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1409Open in IMG/M
3300012987|Ga0164307_10244823All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Desertimonas → Desertimonas flava1248Open in IMG/M
3300012988|Ga0164306_10227322All Organisms → cellular organisms → Bacteria1325Open in IMG/M
3300012988|Ga0164306_10581730All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria874Open in IMG/M
3300012988|Ga0164306_11140094Not Available650Open in IMG/M
3300012988|Ga0164306_11590225Not Available563Open in IMG/M
3300013297|Ga0157378_12055077Not Available622Open in IMG/M
3300013306|Ga0163162_11953078Not Available672Open in IMG/M
3300014325|Ga0163163_11531961Not Available728Open in IMG/M
3300014325|Ga0163163_12993921Not Available527Open in IMG/M
3300014326|Ga0157380_10213494All Organisms → cellular organisms → Bacteria1721Open in IMG/M
3300014326|Ga0157380_13409270Not Available509Open in IMG/M
3300015189|Ga0167667_1056263All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria910Open in IMG/M
3300015371|Ga0132258_10306737All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3906Open in IMG/M
3300015371|Ga0132258_10964928Not Available2153Open in IMG/M
3300015371|Ga0132258_11858509Not Available1517Open in IMG/M
3300015372|Ga0132256_103218013Not Available549Open in IMG/M
3300015373|Ga0132257_101191003Not Available964Open in IMG/M
3300015374|Ga0132255_104535727Not Available588Open in IMG/M
3300015374|Ga0132255_105988363Not Available514Open in IMG/M
3300018028|Ga0184608_10053412All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Ilumatobacteraceae → Desertimonas → Desertimonas flava1597Open in IMG/M
3300018081|Ga0184625_10233340Not Available964Open in IMG/M
3300018432|Ga0190275_11016958Not Available900Open in IMG/M
3300018432|Ga0190275_12618680Not Available581Open in IMG/M
3300018469|Ga0190270_10339189All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1360Open in IMG/M
3300018469|Ga0190270_12002162Not Available637Open in IMG/M
3300018476|Ga0190274_10154504All Organisms → cellular organisms → Bacteria1943Open in IMG/M
3300018476|Ga0190274_10273776All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1550Open in IMG/M
3300018481|Ga0190271_10737617Not Available1108Open in IMG/M
3300018481|Ga0190271_13305203Not Available540Open in IMG/M
3300019361|Ga0173482_10660777Not Available535Open in IMG/M
3300019767|Ga0190267_11409389Not Available529Open in IMG/M
3300020022|Ga0193733_1030252All Organisms → cellular organisms → Bacteria → Terrabacteria group1529Open in IMG/M
3300023261|Ga0247796_1065045Not Available656Open in IMG/M
3300023269|Ga0247773_1241403Not Available535Open in IMG/M
3300025925|Ga0207650_10727529Not Available839Open in IMG/M
3300025931|Ga0207644_10320107Not Available1254Open in IMG/M
3300025940|Ga0207691_11584584Not Available533Open in IMG/M
3300025941|Ga0207711_11053398Not Available753Open in IMG/M
3300025961|Ga0207712_10498762Not Available1040Open in IMG/M
3300025972|Ga0207668_10264318All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1404Open in IMG/M
3300025986|Ga0207658_11292921Not Available667Open in IMG/M
3300026095|Ga0207676_12390327Not Available526Open in IMG/M
3300026142|Ga0207698_11022286Not Available838Open in IMG/M
3300027876|Ga0209974_10135646All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Burkholderia → Burkholderia cepacia complex880Open in IMG/M
3300028592|Ga0247822_11157835Not Available644Open in IMG/M
3300028787|Ga0307323_10315687All Organisms → cellular organisms → Bacteria → Terrabacteria group561Open in IMG/M
3300028802|Ga0307503_10052060All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1567Open in IMG/M
3300028802|Ga0307503_10350749Not Available756Open in IMG/M
3300028824|Ga0307310_10424079Not Available663Open in IMG/M
3300028828|Ga0307312_10558286All Organisms → cellular organisms → Bacteria → Terrabacteria group757Open in IMG/M
3300030336|Ga0247826_11257627All Organisms → cellular organisms → Bacteria595Open in IMG/M
3300031058|Ga0308189_10550608Not Available503Open in IMG/M
3300031366|Ga0307506_10051324Not Available1202Open in IMG/M
3300031455|Ga0307505_10126867Not Available1156Open in IMG/M
3300031740|Ga0307468_101036020All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia725Open in IMG/M
3300031939|Ga0308174_10385863All Organisms → cellular organisms → Bacteria1125Open in IMG/M
3300032075|Ga0310890_11355898Not Available583Open in IMG/M
3300032205|Ga0307472_102676379Not Available509Open in IMG/M
3300034147|Ga0364925_0131642All Organisms → cellular organisms → Bacteria → Terrabacteria group901Open in IMG/M
3300034148|Ga0364927_0083442All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria872Open in IMG/M
3300034149|Ga0364929_0205258All Organisms → cellular organisms → Bacteria → Terrabacteria group653Open in IMG/M
3300034156|Ga0370502_0289124Not Available525Open in IMG/M
3300034157|Ga0370506_025946Not Available1206Open in IMG/M
3300034170|Ga0370487_0100098All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia928Open in IMG/M
3300034354|Ga0364943_0247798Not Available665Open in IMG/M
3300034653|Ga0316599_227359Not Available501Open in IMG/M
3300034965|Ga0370497_0015253Not Available1512Open in IMG/M
3300034965|Ga0370497_0193317Not Available525Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil28.23%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere5.65%
Untreated Peat SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil4.84%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere4.84%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil3.23%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.23%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment3.23%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.23%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere3.23%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil2.42%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.42%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere2.42%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.42%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere2.42%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.42%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil1.61%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.61%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.61%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.61%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.61%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere1.61%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere1.61%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.81%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.81%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.81%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter0.81%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil0.81%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.81%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.81%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.81%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.81%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004157Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005327Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaGHost-AssociatedOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005548Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaGHost-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006038Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5Host-AssociatedOpen in IMG/M
3300006048Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3Host-AssociatedOpen in IMG/M
3300006178Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2Host-AssociatedOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006576Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009610Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700EnvironmentalOpen in IMG/M
3300010147Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010154Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300011003Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300011442Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT138_2EnvironmentalOpen in IMG/M
3300011445Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2EnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012882Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2EnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300012988Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300015189Arctic soil microbial communities from a glacier forefield, Rabots glacier, Tarfala, Sweden (Sample Rb2a, glacial moraine)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300018028Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coexEnvironmentalOpen in IMG/M
3300018081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1EnvironmentalOpen in IMG/M
3300018432Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 TEnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300019767Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 TEnvironmentalOpen in IMG/M
3300020022Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2EnvironmentalOpen in IMG/M
3300023261Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S166-409R-6EnvironmentalOpen in IMG/M
3300023269Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L092-311B-6EnvironmentalOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027876Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)Host-AssociatedOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300028787Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_381EnvironmentalOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300031058Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031366Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_SEnvironmentalOpen in IMG/M
3300031455Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_SEnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300034147Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17EnvironmentalOpen in IMG/M
3300034148Sediment microbial communities from East River floodplain, Colorado, United States - 18_j17EnvironmentalOpen in IMG/M
3300034149Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17EnvironmentalOpen in IMG/M
3300034156Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_01D_18EnvironmentalOpen in IMG/M
3300034157Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_05D_18EnvironmentalOpen in IMG/M
3300034170Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_03D_16EnvironmentalOpen in IMG/M
3300034354Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17EnvironmentalOpen in IMG/M
3300034653Metatranscriptome of peat soil microbial communities from wetland fen in Alaska, United States - Frozen_pond_03R_16 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034965Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_04D_17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI10216J12902_10774756523300000956SoilMTDEQDVAESLDEEMVGTDAVTSDEVGAFDDAPDRPVGLPFADADVTDESLADRVERELPDVDDVPDDTWRLDEPTVVVDSDLLERVDQDGDLAE
C688J35102_12010000023300002568SoilMTDEQDVAESVDEEMVGTDAVTSDEAGAFDDAPDRPVGLPFADADVTDESLAERAAREIPDEVDDPDVPLRLVEPEIIVDSDLLEQIDEDGDLAEPD*
Ga0063454_10206049013300004081SoilDAVTSDEAGAFDDAPDRPVGLPFADADVTDESLAERAAREIPDEVDDPDVPLRLVEPEIIVDSDLLEQIDEDGDLAEPD*
Ga0062593_10273883913300004114SoilVSDEQDVAESVDEEMTGADPVTSDEVGAFEDAPHRPVGLPFADADVTDESFAERTDRELPELEGDPDQPLRLVEPEVLVDSDLLEQVDEDGDLAEPD*
Ga0062590_10017535313300004157SoilVSDEQDVAESVDEEMIGADPVTSDEVGAFEDAPHRPVGLPFADADVTDESFAERTDRELPELEGDPDQPLRLVEPEVLVDSDLLEQVDEDG
Ga0062594_10134676013300005093SoilMSDEQDVAESIDEEMVGTDAVTSDEQGAFDDAPDRPVGLPFADADVTDESLAERAAREVPEVEDDPDAPLRLVEPDVLVDSDLMELIDEDGDVAEPD*
Ga0062594_10286076913300005093SoilMTDEQDAAESVDEEMVGTDAVTSDEVGAFGDSPDRAVGLPFADADVTDESFAERVAREIPDVADDPDSPLRLVEPEVLVDSDLLEQVDEEGDLAEPD*
Ga0070658_1184897613300005327Corn RhizosphereMTDEQDMAESVDEEIVGTDAASDEVGSFDDSPDLPVGLPFADADVTDESFAERSDREVPELVDDPDQPLRLVEPAIHVDSDLLEQYDDDGDLAEPD*
Ga0070670_10161322923300005331Switchgrass RhizosphereMTDEQDMAESVDEEIVGTDAASDEVGSFDDSPDLPVGLPFADADVTDESFAERSDREVPELVDDPDQPLRLVEPAILVDSDLLEQYDDDGDLAEPD*
Ga0068868_10157471713300005338Miscanthus RhizosphereDAVTSDEVGAFDDAPDRPVGLPFADADVTDESLAERVARETPEFADDPNQPLRLVEPDVLVDSDLLEQVDEEGDLAEPD*
Ga0070689_10156423213300005340Switchgrass RhizosphereMSDEQDVAESVDEEMVGTDAVTSDEVGAFDDAPDRPVGLPFADADVTDESLAERVAREIPDEVDDPDVPLRLVEPDVLVDSDLLEQIDEDGDVAEPD*
Ga0070673_10166802813300005364Switchgrass RhizosphereMTDEQDMAESVDEEIVGTDAANSDEVGSFDDSPDLPVGLPFADADVTDESFAERSDREVPELVDDPDQPLRLVEPAILVDSDLLEQYDDDGDLAEPD*
Ga0070700_10130866713300005441Corn, Switchgrass And Miscanthus RhizosphereMTDEQDMAESVDEEIVGTDAASDEVGSFDDSPDLPVGLPFADADVTDESFAERSDREVPELVDDPDQPLRLVEPAILVDSDLLDQIDEDGNLAEPD*
Ga0070698_10105814913300005471Corn, Switchgrass And Miscanthus RhizosphereMGDEQDVAESVDEERVGTDAVTSDEVGAFDDAPDRPVGLPFTNADVTDESLAERVARETPDIADDPDEPLRLVEPDVLVDSDLLEHVDEDGDLAEPD*
Ga0070686_10025779523300005544Switchgrass RhizosphereMTDEQDMAESVDEEIVGTDAANSDEVGSFDDSPDLPVGLPFADADVTDESFAERSDRAVPELVDDPDQPLRLVEPAILVDSDLLEQYDDDGDLAEPD*
Ga0070665_10194222513300005548Switchgrass RhizosphereAESVDEDMLGTDAVAGDEVGAFDDAPDRPVGLPFADADVTDESFAERSDREEPELLEDDPDLPLRLVEPAILVDSDLLENVDEDGDLAEPD*
Ga0070702_10134710913300005615Corn, Switchgrass And Miscanthus RhizosphereRRTSVAMGDEQDRAESVDEETVGADAVTSDEVGAFDDAPDRPVGLPFADADVTDESFAERGARGTPELEDDPNAPLRLVEPDVLVDSDLLERVDEDGDLAEPD*
Ga0068860_10067229513300005843Switchgrass RhizosphereMGDEQDGAESVDEEMVGADAVTSDEVGAFDDAPDRPVGLPFADADVTDESFAERGARGTPELEDDPNAPLRLVEPDVLVDSELLERVDEDGDLAEPD*
Ga0068860_10122842013300005843Switchgrass RhizosphereLGTDAVAGDEVGAFDDAPDRPVGLPFADADVTDESFAERSDREEPELLEDDPDLPLRLVEPAILVDSDLLENVDEDGDLAEPD*
Ga0075365_1092114013300006038Populus EndosphereMTDEQDLAESIDEEMVGTDAVTSDEVGAFDDAPDRPVGLPFADADVTDESLAERAAREVPELTDDPGEPSRLVEPDVL
Ga0075363_10021858823300006048Populus EndosphereLAESIDEEMVGTDAVTSDEVGAFDDAPDRPVGLPFADADVTDESLAERVAREVPELTDDPGEPSRLVEPDVLLDSDLLERIDEDGDIAEPE*
Ga0075367_1019103823300006178Populus EndosphereMTDEQDIAESIDEEMVGTDAVTSDEVGAFDDAPDRPVGLPFADADVTDESLAERVAREVPELTDDPGEPSRLVEPDVLLDSDLLERIDEDGDIAEPE*
Ga0068871_10170215623300006358Miscanthus RhizosphereMTDEQDMAESVDEEIVGTDAASDEVGSFDDSPDLPVGLPFADADVTDESFAERSDREVPELVDDPDQPLRFVEPAILVDSDLLDQIDEDGNLAE
Ga0074047_1138216013300006576SoilMGDDQDIAESVDEEMVGTDAVTSDEVGAFDDAPDRPVGVPFADADVTDESLAERAAREVPELEDDRNLPLRLVEPDVLVDSELLEQIDEDGDLAEPD*
Ga0105245_1082886523300009098Miscanthus RhizosphereMSDEQDVAESIDEEMVGTDAVTSDEQGAFDDAPDRPVGLPFADADVTDESLAERAAREVPEVEDDPDAPLRLVEPDVLVDSDLMELLDEDGDVAEPD*
Ga0105245_1149209813300009098Miscanthus RhizosphereVTSDEVGAFDDAPDRPVGLPFADADVTDESLAERVAREIPDEVDDPDVPLRLVEPDVLVDSDLLEQIDEDGDVAEPD*
Ga0105243_1290925123300009148Miscanthus RhizosphereMSDEQDVAESIDEEMVGTDAVTSDEQGAFDDAPDRPVGLPFADADVTDESLAERAAREVPEVEDDPDAPLRLVEPDVLVDSDLMELLDEDGDLA
Ga0105248_1327328313300009177Switchgrass RhizosphereAVTSDEQGAFDDAPDRPVGLPFADADVTDESLAERAAREVPEVEDDPDAPLRLVEPDVIVDSDLMELLDEDGDVAEPD*
Ga0105238_1071130913300009551Corn RhizosphereAVTSDEQGAFDDAPDRPVGLPFADADVTDESLAERAAREVPEVEDDPDVPLRLVEPDVLVDSDLMELLDEDGDVAEPD*
Ga0105340_111987623300009610SoilMSDEQDAAESVDEEMVGTDAVTSDEVGAFGDAPDRAVGLPFADADVTDESFAERVAREIPDVADDPDSPLRLVEPEVLVDSDLLEQVDEEGDLAEPD*
Ga0126319_157103423300010147SoilMSDEQDVAESVDEEVVGADAVTSDEVGQFDETPDSPVGLPFADADVTDESFAERSEREVPELVDDPQQPLRLVEPQVLVDSDLLELVDEDGDLAEPD*
Ga0127503_1112421013300010154SoilAVTSDEVGAFDDAPDRPVGLPFADADVTDESFAERSDREVPELLEDDPDLPLRLVEPEILVDTDLLENIDEDGDLGEPD*
Ga0105239_1268473123300010375Corn RhizosphereMSDEQDVAESIDEEMVGTDAVTSDEEGAFDDAPDRPVGLPFADADVTDESLAERAAREVPEVEDDPDAPLRLVEPDVLVDSDLMELIDEDGDVAEPD*
Ga0134122_1130309123300010400Terrestrial SoilMGDEQDVAESVDEEMVGADAVTSDEVGAFDDAPDRPVGLPFANADITDESLAERVARETPDVADDPDEPLRLVEPDVLVDSDLLEQVDEDGDVAEPD*
Ga0138514_10003957613300011003SoilMGDEQDVAESVDEEMVGTDAVTSDEVGAFDDAPDRPVVLPFANAAVTDESLAECVARETPDFADDSDEPLRLVEPDVLVDSDLLEQVDQDGDLAEPD*
Ga0105246_1135002213300011119Miscanthus RhizosphereEMVGADAVTSDEVGAFDDAPDRPVGLPFADADVTDESLAERVARETPEFADDPNQPLRLVEPDVLVDSDLLEQVDEEGDLAEPD*
Ga0137437_117039523300011442SoilMTDEQDAAESVDEEMVGTDAVTSDEVGAFGDAPDRAVGLPFADADVTDESFAERVAREIPDVADEPDSPLRLVEPEVLVDSDLLEQVDEEGDLAEPD*
Ga0137427_1040852123300011445SoilMSDEQDAAESVDEEMVGTDAVTSDEVGAFGDAPDRAVGLPFADADVTDESFAERVAREIPDVADDPDSPLRLVEPEVLVDSELLEQVDEEGDLAEPD*
Ga0150985_10598904913300012212Avena Fatua RhizosphereESLDEEMTGADPVTSDEVGSFDDAPDRPVGLPFADADVTDESFAERSSQELPELGEDSDAPLRLEEADLLVDSDLLEQVDEQGDLAEPD*
Ga0150985_11336771513300012212Avena Fatua RhizosphereMRDEQDVAESVDEEMVGTDAVTSDEVGAFDDAPDRPVGLPFADADVTDESLAERTARELPDFDQAPDQPLRLVEPDIIVDSDLLEQVDEDGDLAEPD*
Ga0150985_12291023123300012212Avena Fatua RhizosphereMTDEQDRAESVDEEMVGTDAVTSDERGSFDDAPDQPLGLPYADADVTDESLAERAARELPDFGDDPTQPLRLVEPELLVDSDLVEQIDADGDVAEPD*
Ga0150984_10030171013300012469Avena Fatua RhizosphereVAESVDEEMVGTDAVTSDEAGAFDDAPDRPVGLPFADADVTDESLAERAAREIPDEVDDPDVPLRLVEPEIIVDSDLLEQIDEDGDLAEPD*
Ga0150984_10146589443300012469Avena Fatua RhizosphereMTDEQDRAESVDEEMVGTDAVTSDERGSFDDAPDQPLGLPYADADVTDESLAERAARELPDFGEDPTQPLRLVEPEVLVDSDLVEQIDADGDVAEPD*
Ga0150984_12143333923300012469Avena Fatua RhizosphereDVAEGLDEEMVGTDPATSDEEGAFGDAPDRPVGLPFADADVTDESLAERVARENPDFGEQGAGPAVAEDSLVIVDTDLVERIDADGDLAEPD*
Ga0150984_12198202023300012469Avena Fatua RhizosphereEQDVAESLDEEMTGADPVTSDEVGSFDDAPDRPVGLPFADADVTDESFAERLSQELPELGEDPDAPLRLEEADLLVDSDLLEQVDEQGDLAEPD*
Ga0157304_108976023300012882SoilMTDEQDMAESVDEEIVGTDAASDEVGSFDDSPDLPVGLPFADADVTDESFAERSDREVPELVDDPDQPLRLVEPAILVDSDLLDQID
Ga0164298_1098504613300012955SoilMTDEQDMAESVDEEIVGTDAASDEVGSFDDSPDLPVGLPFADADVTDESFAGRSDREVPELVDDPDQPLRLVEPAILVDSDLLEQYDDDGDLAEPD*
Ga0164303_1067357913300012957SoilMTDEQDMAESVDEEIVGTDAASDEVGSFDDSPDLPVGLPFADADVTDESFAERSDREVPELVDDPDQPLRLVEPAILVD
Ga0164302_1064876623300012961SoilDEQDSAESVDEEMVGTDAVTSDEVGAFDDAPDRPVGLPFADADVTDESLAERVAREVPDEVDDPDVPLRLVEPDVIVDSALLEQIDEDGDVAEPD*
Ga0164309_1075373623300012984SoilMAESVDEEIVGTDAASDEVGSFDDSPDLPVGLPFADADVTDESFAERSDREVPELVDDPDQPLRLVEPAILVDSDLLDQIDEDGNLAEPD*
Ga0164309_1101834223300012984SoilMSDEQDGESVDEEMLGADAVTSDEVGAFDDAPDRPVGLPFADADVTDESLAERAARELPDFDQLPAALTVDDPDVIVDSDLLERVDEDGDLA
Ga0164309_1160252523300012984SoilDVAESIDEEMLGTDEVTSDEQGAFDDAPDRPHGLPFADADVTDESLAERAAREVPEVEDDPDAPLRLVEPDVLVDSDLMELLDEDGDLAEPD*
Ga0164308_1002330523300012985SoilMSDEQDNAESVDEAMLGTDAVTSDEVGAFDDAPDRPVGLPFADADVTDASFAARSDREVPELLEDDPDLPLRLVEPAILVDTDLLENIDEDGDLAEPD*
Ga0164308_1011366423300012985SoilMSDEQDVAEGLDEEMVGTDPATSDEEGAFGDAPDRPVGLPFADADVTDESLAERVARENPDFGEQGEGPAVADDSLVILDTDLVERIDAEGDLAEPD*
Ga0164308_1096031113300012985SoilMSDEQDVAESVDEEMTGNDAVTSDEVGAFDDAPDRPVGLPFADADVTDESFAERSARELPDVDELPFTATLDEPEIIYDTDLLDQLDEDGDLAEPD*
Ga0164307_1018365723300012987SoilMSDEQDVAESVDEEMLGADAVTSDEVGAFDDAPDRPVGLPFADADVTDESLAERAARELPDFDQLPAALTVDDPDVIVDSDLLERVDEDGDLAEPD*
Ga0164307_1024482323300012987SoilMSDEQDVAEGLDEEMVGTDPATSDEEGAFGDAPDRPVGLPFADADVTDESLAERVARENPDFGEQGEGPAVADDSLVIVDTDLVERIDAEGDLAEPD*
Ga0164306_1022732223300012988SoilMSDEQDNAESVDEAMLGTDAVTSDEVGAFDDAPDRPVGLPFADADVTDESFAARSDREVPELLEDDPDLPLRLVEPAILVDTDLMENIDEDGDLAEPD*
Ga0164306_1058173023300012988SoilMSDEQDVAESIDEEMVGTDAVTSDEQGAFDDAPDRPVGLPFADADVTDESLAERVAREVPEVEDDPDAPLRLVEPDVLVDSDLMELLDEDGDLAEPD*
Ga0164306_1114009423300012988SoilMSDEQDVAESVDEEMLGADAVTSDEVGAFDDAPDRPVGLPFADADVTDESLAERAARELPDFDQLPGALTVDDPDVIVDSDL
Ga0164306_1159022513300012988SoilMSDEQDSAESVDEEMVGTDAVTSDEVGAFDDAPDRPVGLPFADADVTDESFAERTARELPDFEDAPDQPLRLVEPDIIVDSDLLEQVDEDGDLAEPD*
Ga0157378_1205507723300013297Miscanthus RhizosphereVGDEQDVAESVDEEMVGSDAVTSDEVGAFDDAPDRPVGLPFAAADVTDESFAERGARGTPELEDDPNAPLRLVEPDVLVDSDLLERVDEDGDLAEPD*
Ga0163162_1195307813300013306Switchgrass RhizosphereMSDEQDNAESVDEDMLGTNAAAGDEVGAFDDAPDRPVGLPFADADVTDESFAERSDREEPELLEDDPDLPLRLVEPEILVDSALLENIDEDGDLAEPD*
Ga0163163_1153196123300014325Switchgrass RhizosphereMTDEQDMAESVDEEIVGTDAASDEVSSFDDSPDLPVGLPFADADVTDESFAERSDREVPELVDDPDQPLRLVEPAILVDSDLLDQIDEDGNLAEPD*
Ga0163163_1299392113300014325Switchgrass RhizosphereMGDEQDRAESVDEETVGADAVTSDEVGAFDDAPDRPVGLPFADADVTDESFAERGARGTPELEDDPNAPLRLVEPDVLVDSYLLERVDEDGDLAEPD*
Ga0157380_1021349433300014326Switchgrass RhizosphereMTDEQDMAESVDEEIVGTDAASDEVGSFDDSPDLTVGLPFADADVTDESFAERSDREVPELVDDPDQPLRLVEPAILVDSDLLDQIDEDGNLAEPD*
Ga0157380_1340927013300014326Switchgrass RhizosphereMGDEQDGAESVDEEMVGADAVTSDEVGAFDDAPDRPVGLPFADADVTDESFAERGARGTPELEDDPNAPLRLVEPDVL
Ga0167667_105626323300015189Glacier Forefield SoilVSNDEQDGAESLDEEMLGEGTATSDEVGGYDDAPDHPTGIQFADADVTDESFAERTLQEEPELEDDPSVPPRLVEPAILVDTDLLELIDDDGDLAEPDD*
Ga0132258_1030673723300015371Arabidopsis RhizosphereMSDEQSSAESVDEDVVGTDAVTSDEQGAFYDAPDRPVGLPFADADVTDESLAERAAREVPEVEDDPSQPLRLVEPDVLVDSDLLEQVDEDGDIAEPD*
Ga0132258_1096492833300015371Arabidopsis RhizosphereMTDEQDAAESVDEDMVGADPVTSDEVGAFDDAPDRPVGLPFADADVTDESFAERVAREVPDVADDPDSPLRLVEPEVLVDSDLLEQVDEEGDLAEPD*
Ga0132258_1185850933300015371Arabidopsis RhizosphereMSDEQDVAESIDEEMVGTDAVTSDEQGAFDDAPDRPVGLPFADADVTDESLAERAAREVPEVEDDPDAPLRLVEPDVLVDSDLMELLDEDGDLAE
Ga0132256_10321801313300015372Arabidopsis RhizosphereMSDEQNSAESVDEEVVGTDAVTSDEQGAFDDAPDRPVGLPFADADVTDESLAERAAREVPEVEDDPSQPLRLVEPDVLVDSDLLEQVDEDGDIAEPD*
Ga0132257_10119100313300015373Arabidopsis RhizosphereMSDEQDVAESIDEEMVGTDAVTSDEQGAFDDAPDRPVGLPFADADVTDESLAERAAREVPEVEDDPDVPLRLVEPDVLVDSDLMELLDEDGDVAEPD*
Ga0132255_10453572723300015374Arabidopsis RhizosphereMSDEQDVAESIDEEMVGTDAVTSDEQGAFDDAPDRPVGLPFADADVTDESLAERAAREVPEVEDDPDAPLRLVEPDVLVDSDLMELLDEDGDLAEPD*
Ga0132255_10598836323300015374Arabidopsis RhizosphereMSDEQNSAESVDEEVVGTDAVTSDEEGAFDDAPDRPVGLPFADADVTDESLAERAAREVPEVEDDPSQPLRLVEPDVLVDSDLLEQVDEDGDIAEPD*
Ga0184608_1005341213300018028Groundwater SedimentRSVAMGAEQDVAESVDEEMVGTDAVTSDEVGAFDDAPDRPVGLPFANADVTDESLAERVARETPDVADDPDEPLRLVEPEVLVDSDLLEQVDEDGDLAEPD
Ga0184625_1023334013300018081Groundwater SedimentMSDEQDGAESVDEDRVGGDPVTSDEVGAFGDSPDGPVGLPFADADVTDESFAERTARELPEVEDDPDQPLRLVEPEVLVDSDLLEQVDEDGDLAEPE
Ga0190275_1101695823300018432SoilMADEQDVAESVDEEMVGTDAVTSDEVGTFDDAPDRPVGLPFADADVTDESLAERAARELPDVGDDGSWGLQVAEPDVIVDSDLLEQIDEDGDLAEPD
Ga0190275_1261868023300018432SoilMSDEQDNAESVDEDMLGTDAVAGDEVGAFDDAPDRPVGLPFADADVTDESLAERVAREIPDVVDAPDQEWGLEDPVVPLASDLEHIDDDED
Ga0190270_1033918923300018469SoilMSDEQDTAESVDEEIVGTDVTNSDEVGSFDDSPDLPVGLPFADADVTDESFAERAAREVPELEDDPSQPLRLVEPEVLVDSDLLDEIDDDGDVAEPD
Ga0190270_1200216213300018469SoilMTDAQDVAESVDEEVVGSDAVTSDELGRFDDAPDRPVGLPFADADVTDESLAERVAREVPDVVDAPDQAWGLEDPVVLLDSDLENIAEDDEDEELAERD
Ga0190274_1015450423300018476SoilMTDEQDTAESVDEEMVGTDAVTSDEVGSFDDGPDEPVGLPFADADVTDESLAERAAREVPEVEDDPSQPLRLVEPEVLVDSDLLDQVDDDGDLAEPD
Ga0190274_1027377623300018476SoilMGDEQDVAESVDEEMLGSDAVTSDEVGAFDDAPDRPVGLPFADADVTDESLAERAAREVPELTGDEGQPLRLEDPDVLVDSDLLEQIDEDGDLAEPD
Ga0190271_1073761713300018481SoilMSDEQDNAESVDEVIVGTDVTNSDEVGSFDDSPDLPVGLPFADADVTDESFAERAAREVPELEDDPSQPLRLVEPEVLVDSDLLDEIDDD
Ga0190271_1330520313300018481SoilGYSGGMTDAQEVAESVDEEVVGSDAVTSDELGRFDDAPDRPVGLPFADADVTDESLAERVAREVPDVVDAPDQAWGLEDPVVLLDSDLENIAEDDEDEELAERD
Ga0173482_1066077723300019361SoilMTDEQDMAESVDEEIVGTDAASDEVGSFDDSPDLPVGLPFADADVTDESFAERSDREVPELVDDPDQPLRLVEPAILVDSDLLEQ
Ga0190267_1140938913300019767SoilEEMVGTDAVTADEVGAFDDAPDEPVGLPYADADVTDESFAERSAREEPELVDDPDEPVRLVEPALLIDSDLLERIDEDGDLAEPD
Ga0193733_103025233300020022SoilMGDEQDVAESVDEEMVGTDAVTSDEVGAFDDAPDRPVGLPFANADVTDESLAERVARETPDVADDPDEPLRLVEPEVLVDSDLLEQVDEDGDLAEPD
Ga0247796_106504523300023261SoilMTDEQDMAESVDEEIVGTDAASDEVGSFDDSPDLPVGLPFADADVTDESFAERSDREVPELVDDPDQPLRLVEPAILVDSDLLDQIDEDGNLAEPD
Ga0247773_124140323300023269Plant LitterMSDEQDTAESVDEEIVGTDVTNSDEVGSFDDSPDLPVGLPFADADVTDESFAERSDREVPELVDDPDQPLRLVEPAILVDSDLLEQYDDDGDLAEPD
Ga0207650_1072752923300025925Switchgrass RhizosphereMTDEQDMAESVDEEIVGTDAASDEVGSFDDSPDLPVGLPFADADVTDESFAERSDREVPELVDDPDQPLRLVEPAILVDSDLLEQYDDDGDLAEPD
Ga0207644_1032010713300025931Switchgrass RhizosphereMSDEQDNAESVDEDMLGTYAVAGDEVGEFDDAPDRPVGLPFADADVTDESFAERSDREEPELLEDDPDLPLRLVEPAILVDSDLLENVDEDGDLAEPD
Ga0207691_1158458423300025940Miscanthus RhizosphereMSDEQDSAESVDEEMVGTDAVTSDEVGAFDDAPDRPVGLPFADADVTDESLAERVAREIPDEVDDPDVPLRLVEPDVIVDSDLLEQIDEDGDLAEPD
Ga0207711_1105339813300025941Switchgrass RhizosphereMTDEQDMAESVDEEIVGTDAASDEVGSFDDSPDLPVGLPFADADVTDESFAERSDREVPELVDDPDQPLRLVEPAILVDSDLLEQYDDDGNLAEPD
Ga0207712_1049876213300025961Switchgrass RhizosphereMTDEQDMAESVDEEIVGTDAASDEVGSFDDSPDLPVGLPFADADVTDESFAERSDREVPELVDDPDQPLRLVEPAILVDRDLLEQYDDDGDLAEPD
Ga0207668_1026431823300025972Switchgrass RhizosphereMTDEQDMAESVDEEIVGTDAANSDEVGSFDDSPDLPVGLPFADADVTDESFAERSDREVPELVDDPDQPLRLVEPAILVDSDLLEQYDDDGDLAEPD
Ga0207658_1129292113300025986Switchgrass RhizosphereEQDNAESVDEDMLGTDAAAGDEVGAFDDAPDRPVGLPFADADVTDESFAERSDREEPELLEDDPDLPLRLVEPAILVDSDLLENVDEDGDLAEPD
Ga0207676_1239032713300026095Switchgrass RhizosphereMTDEQDMAESVDEEIVGTDAASDEVGSFDDSPDLPVGLPFADADVTDESFAERSDRAVPELVDDPDQPLRLVEPAILVDSDLLEQYDDDGDLAEPD
Ga0207698_1102228613300026142Corn RhizosphereMSDEQDVAESIDEEMVGTDAVTSDEEGAFDDAPDRPVGLPFADADVTDESLAERAAREVPEVEDDPDAPLRLVEPDVIVDSDLMEL
Ga0209974_1013564613300027876Arabidopsis Thaliana RhizosphereMSDEQDAAESVDEEMVGTDAVTSDEVGAFGDAPDRAVGIPFADADVTDESFAERVAREIPDVADDPDSPLSLVEPEVLVDSDLLEQIDEEGDLAEPD
Ga0247822_1115783523300028592SoilMGDGQDGAESVDEEMVGADAVTSDEVGAFDDAPDRPVGLPFADADVTDESFAERGARGTPELEDDPNAPLRLEEPDVLVDSDLLERVDEDGDLAEPD
Ga0307323_1031568733300028787SoilESVDEEMVGTDAVTSDEVGAFDDAPDRPVGLPFANADVTDESLAERVARETPDVADDPDEPLRLVEPEVLVDSDLLEQVDEDGDLAEPD
Ga0307503_1005206033300028802SoilMGDDQDNAESVDEEMVGTDAVTSDEVGTFDDAPDRPVGVPFADADVTDESLAERAARELPELEDDPNQPLRLVEPEVLVDSELLEQIDEDGDLAEPD
Ga0307503_1035074913300028802SoilMTDEQDMAESVDEEIVGTDAANSDEVGSFDDSPDLPVGLPFADADVTDESFAERSDREVPDLVDDPDQPLRLVEPAILV
Ga0307310_1042407923300028824SoilMGDEQDVAESVDEEVVGADAVTSDEVGAFDDAPDRPVGLPFADADVTDESFAERTAREIPDVADDPDEPLRLVEPEVLVDSDLLEQVDDDGDLAEPD
Ga0307312_1055828623300028828SoilMVGTDAVTSDEVGAFDDAPDRPVGLPFANADVTDESLAERVARETPDVADDPDEPLRLVEPEVLVDSDLLEQVDEDGDLAEPD
Ga0247826_1125762723300030336SoilMSDEQDSAESVDEEMVGTDAVTSDEVGAFDDAPDRPVGLPFADADVTDESLAERVAREIPDEVDDPDVPLRLVEPDVLVDSDLLEQ
Ga0308189_1055060823300031058SoilVAESVDEEMVGADPVTSDEVGAFDDAPDRPVGLPFADADVTDESLAGRAARETPDIADDPDEPLRLTEPDVLFDSDLLEQVDEDGDVAEPD
Ga0307506_1005132413300031366SoilMGDEQDAAESVDEETVGTDPVTSDEVGAFDDAPDSPVGLPFADADVTDESLAERVAREVPDVVDHPEEQVRMVEPEILVDSALLEQIDEDGDLAEPD
Ga0307505_1012686723300031455SoilMSDEQDVAESVDEEVVGTDPVTSDEVGTFEEAPDRPVGLPFADADVTDESLAERAARENREVADVDEDGELLEVLDEDGDLAELD
Ga0307468_10103602023300031740Hardwood Forest SoilMGDDQDVAESVDEEMVGTDAVTSDEVGAFDDAPDRPVGVPFADADVTDESLAERAAREVSELEDDPNLPLRLVEPDVLVDSELLEQIDEDGDLAEPD
Ga0308174_1038586323300031939SoilMSDEQDTAESLDEEMLGADAVTSDEVGAFDDAPDRPVGLPFADADVTDESLAERVAREVPDVTDVPLDVPEADVIVDSDLVEQIDEDGDLAEPD
Ga0310890_1135589813300032075SoilMGDEQDGAESVDEEMVGADAVTSDEVGAFDDAPDRPVGLPFADADVTDESFAERGARGTPELEDDPNAPLRLVEPDVLVDSDLLERVDEDGDLAEPD
Ga0307472_10267637913300032205Hardwood Forest SoilMSDPQDSAESIDEEMVGTDAVTSDEVGAFDDAPDRPVGLPFADADVTDESLAERVAREEPELVDDPGQPLRLVEPDVLVDSDLLDHIDEDGDVAEPD
Ga0364925_0131642_34_3273300034147SedimentMSDEQDAAESVDEEMVGTDAVTSDEVGAFGDAPDRAVGLPFADADVTDESFAERVAREIPDVADDPDSPLRLVEPEVLVDSDLLEQVDDEGDLAEPD
Ga0364927_0083442_26_3193300034148SedimentMSDEQDAAESVDEEMVGTDAVTSDEVGAFGDAPDRAVGLPFADADVTDESFAERVAREIPDVADDPDSPLRLVEPEVLVDSDLLEQVDEEGDLAEPD
Ga0364929_0205258_324_6173300034149SedimentMTDEQDAAESVDEEMVGTDAVTSDEVGAFGDAPDRAVGLPFADADVTDESFAERVAREIPDVADDPDSPLRLVEPEVLVDSDLLEQVDEEGDLAEPD
Ga0370502_0289124_1_2763300034156Untreated Peat SoilVAESVDEEVTGTDAVTSDEVGAFDDAPDRPVGLPFADADVTDESLAERAAREVPEIDDDPDLPLRLVEPAILVDTDLLEQIDDDGDLAEPD
Ga0370506_025946_882_11933300034157Untreated Peat SoilMGYSCGMSDEQDAAESFDEEMVGTDAVTSDEIGSFDDAPDLPVGLPFADADVSDESLAERVARENPDVVDDPSLPLRLVEPAILVDSDLLEQVDDDGDLAEPD
Ga0370487_0100098_1_2823300034170Untreated Peat SoilMGDEQDVAENFDEDMVGTDAVTSDEVGSFGDSPDKPVGLPFADADVTDESFAERVARELPDVDDDPAAPLRLEDPDVLVDSELVERIDDDGDLA
Ga0364943_0247798_93_3863300034354SedimentMGDEQDVAESVDEEMVGSDAVTSDEVGAFGDAPDRPVGLPFANADVTDESLAERVARETPDIADDPDEPLRLVEPDVLVDSDLLEQVDEEGDLAEPD
Ga0316599_227359_220_5013300034653Untreated Peat SoilQDVAESFDEEMVGTDAVTSDEIGSFDDAPDLPVGLPFADADVTDESLAERVARENPDVVDDPSLPLRLVEPAILVDSDLLEQVDDDGDLAEPD
Ga0370497_0015253_1066_13503300034965Untreated Peat SoilMGDEQDVAESVDEEMVGTDAVTSDEVGAFDDAPDRPVGLPFADADVTDESLAERAAREIPEDTDDPVRLVEPAILVDSDLLEQVDEDGDLAEPD
Ga0370497_0193317_2_2653300034965Untreated Peat SoilVDEEVVGTDAVTSDEVGAFDDAPDRPVGLPFADADVTDESFAERTARELPEVSDDVDLPLRLVEPAILVDTDLLEQIDEDGDLAEPD


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