Metagenome / Metatranscriptome Family F069053

Basic Information
Family ID	F069053
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	68 residues
Representative Sequence	MRHICIAVMIAMIASIASPALAQSRRKAPTQYAPQATSPGVYTGRRGVNTDPDPNVQFEIMRQQNWRKGG
Number of Associated Samples	111
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	69.35 %
% of genes near scaffold ends (potentially truncated)	26.61 %
% of genes from short scaffolds (< 2000 bps)	82.26 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (71.774 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (19.355 % of family members)
Environment Ontology (ENVO)	Unclassified (34.677 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (41.129 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 41.43% β-sheet: 0.00% Coil/Unstructured: 58.57%
Feature Viewer

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Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF01970	TctA	36.29
PF13531	SBP_bac_11	25.81
PF07331	TctB	2.42
PF00892	EamA	2.42
PF03401	TctC	0.81
PF02780	Transketolase_C	0.81
PF00528	BPD_transp_1	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG1784	TctA family transporter	General function prediction only [R]	36.29
COG3333	TctA family transporter	General function prediction only [R]	36.29
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	72.58 %
Unclassified	root	N/A	27.42 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	72.58 %
Unclassified	root	N/A	27.42 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	71.77 %
Unclassified	root	N/A	27.42 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.81 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	52.42 %
Unclassified	root	N/A	27.42 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.81 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	39.52 %
Unclassified	root	N/A	27.42 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4.03 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	3.23 %
Metazoa	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.42 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	21.77 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	15.32 %
Pseudomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales	4.03 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3.23 %
Eumetazoa	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.42 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	15.32 %
Pseudomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae	4.03 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	4.03 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	3.23 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.61 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	0.81 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.81 %
Bilateria	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.42 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	15.32 %
Pseudomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas	4.03 %
Methylovirgula	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula	3.23 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	3.23 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.61 %
Deuterostomia	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia	0.81 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	0.81 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.42 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	15.32 %
Pseudomonas syringae group	species group	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group	4.03 %
unclassified Methylovirgula	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → unclassified Methylovirgula	3.23 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	2.42 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.61 %
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	0.81 %
Chordata	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata	0.81 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.42 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	15.32 %
Pseudomonas syringae group genomosp. 1	species subgroup	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1	4.03 %
Methylovirgula sp. HY1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → unclassified Methylovirgula → Methylovirgula sp. HY1	3.23 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2.42 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.61 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	0.81 %
Craniata	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata	0.81 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.42 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	15.32 %
Pseudomonas syringae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	4.03 %
Methylovirgula sp. HY1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → unclassified Methylovirgula → Methylovirgula sp. HY1	3.23 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2.42 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.61 %
Vertebrata	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata	0.81 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	0.81 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.42 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	15.32 %
Pseudomonas syringae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	4.03 %
Methylovirgula sp. HY1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → unclassified Methylovirgula → Methylovirgula sp. HY1	3.23 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2.42 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.61 %
Gnathostomata	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata	0.81 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	0.81 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.42 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	15.32 %
Pseudomonas syringae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	4.03 %
Methylovirgula sp. HY1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → unclassified Methylovirgula → Methylovirgula sp. HY1	3.23 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2.42 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.61 %
Chondrichthyes	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes	0.81 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	0.81 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.42 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	15.32 %
Pseudomonas syringae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	4.03 %
Methylovirgula sp. HY1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → unclassified Methylovirgula → Methylovirgula sp. HY1	3.23 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2.42 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.61 %
Elasmobranchii	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii	0.81 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	0.81 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.42 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	15.32 %
Pseudomonas syringae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	4.03 %
Methylovirgula sp. HY1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → unclassified Methylovirgula → Methylovirgula sp. HY1	3.23 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2.42 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.61 %
Selachii	infraclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii	0.81 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	0.81 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.42 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	15.32 %
Pseudomonas syringae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	4.03 %
Methylovirgula sp. HY1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → unclassified Methylovirgula → Methylovirgula sp. HY1	3.23 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2.42 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.61 %
Galeomorphii	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii	0.81 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	0.81 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.42 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	15.32 %
Pseudomonas syringae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	4.03 %
Methylovirgula sp. HY1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → unclassified Methylovirgula → Methylovirgula sp. HY1	3.23 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2.42 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.61 %
Galeoidea	superorder	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea	0.81 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	0.81 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.42 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	15.32 %
Pseudomonas syringae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	4.03 %
Methylovirgula sp. HY1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → unclassified Methylovirgula → Methylovirgula sp. HY1	3.23 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2.42 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.61 %
Orectolobiformes	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea → Orectolobiformes	0.81 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	0.81 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.42 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	15.32 %
Pseudomonas syringae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	4.03 %
Methylovirgula sp. HY1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → unclassified Methylovirgula → Methylovirgula sp. HY1	3.23 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2.42 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.61 %
Hemiscylliidae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea → Orectolobiformes → Hemiscylliidae	0.81 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	0.81 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.42 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	15.32 %
Pseudomonas syringae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	4.03 %
Methylovirgula sp. HY1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → unclassified Methylovirgula → Methylovirgula sp. HY1	3.23 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2.42 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.61 %
Chiloscyllium	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea → Orectolobiformes → Hemiscylliidae → Chiloscyllium	0.81 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	0.81 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	27.42 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	15.32 %
Pseudomonas syringae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	4.03 %
Methylovirgula sp. HY1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → unclassified Methylovirgula → Methylovirgula sp. HY1	3.23 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2.42 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1.61 %
Chiloscyllium punctatum	species	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea → Orectolobiformes → Hemiscylliidae → Chiloscyllium → Chiloscyllium punctatum	0.81 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	0.81 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c2339646	All Organisms → cellular organisms → Bacteria	830	Open in IMG/M
3300000891\|JGI10214J12806_12751326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → unclassified Methylovirgula → Methylovirgula sp. HY1	524	Open in IMG/M
3300002075\|JGI24738J21930_10008478	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	2338	Open in IMG/M
3300002568\|C688J35102_118181858	Not Available	536	Open in IMG/M
3300004463\|Ga0063356_106494961	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300004479\|Ga0062595_100589508	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300004479\|Ga0062595_100653943	Not Available	833	Open in IMG/M
3300004480\|Ga0062592_102021621	Not Available	570	Open in IMG/M
3300004643\|Ga0062591_102583810	All Organisms → cellular organisms → Bacteria	535	Open in IMG/M
3300005093\|Ga0062594_101696105	All Organisms → cellular organisms → Bacteria	660	Open in IMG/M
3300005104\|Ga0066818_1012437	Not Available	643	Open in IMG/M
3300005147\|Ga0066821_1007657	Not Available	726	Open in IMG/M
3300005163\|Ga0066823_10042360	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300005165\|Ga0066869_10000427	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4298	Open in IMG/M
3300005169\|Ga0066810_10028886	Not Available	978	Open in IMG/M
3300005328\|Ga0070676_10234989	All Organisms → cellular organisms → Bacteria	1216	Open in IMG/M
3300005330\|Ga0070690_100169881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	1500	Open in IMG/M
3300005331\|Ga0070670_100916988	Not Available	795	Open in IMG/M
3300005343\|Ga0070687_101312920	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300005406\|Ga0070703_10282064	Not Available	686	Open in IMG/M
3300005439\|Ga0070711_100864542	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300005563\|Ga0068855_100305911	All Organisms → cellular organisms → Bacteria → Proteobacteria	1760	Open in IMG/M
3300005719\|Ga0068861_100764601	Not Available	904	Open in IMG/M
3300005719\|Ga0068861_101765418	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → unclassified Methylovirgula → Methylovirgula sp. HY1	613	Open in IMG/M
3300005834\|Ga0068851_10105743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	1498	Open in IMG/M
3300006038\|Ga0075365_10007764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6041	Open in IMG/M
3300006038\|Ga0075365_10100262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1982	Open in IMG/M
3300006038\|Ga0075365_10540185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	824	Open in IMG/M
3300006038\|Ga0075365_10890832	Not Available	627	Open in IMG/M
3300006042\|Ga0075368_10244269	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	766	Open in IMG/M
3300006047\|Ga0075024_100428594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	679	Open in IMG/M
3300006051\|Ga0075364_10178408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1437	Open in IMG/M
3300006186\|Ga0075369_10660776	All Organisms → cellular organisms → Bacteria	502	Open in IMG/M
3300006574\|Ga0074056_11807104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2174	Open in IMG/M
3300006579\|Ga0074054_10019209	All Organisms → cellular organisms → Bacteria → Proteobacteria	1669	Open in IMG/M
3300006581\|Ga0074048_10120637	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	660	Open in IMG/M
3300006881\|Ga0068865_100017424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	4618	Open in IMG/M
3300006953\|Ga0074063_10130475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	918	Open in IMG/M
3300009011\|Ga0105251_10359954	Not Available	665	Open in IMG/M
3300009094\|Ga0111539_11948245	Not Available	681	Open in IMG/M
3300009098\|Ga0105245_10521999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	1206	Open in IMG/M
3300009174\|Ga0105241_10092046	All Organisms → cellular organisms → Bacteria	2394	Open in IMG/M
3300009176\|Ga0105242_11587098	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	688	Open in IMG/M
3300009545\|Ga0105237_10121255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	2609	Open in IMG/M
3300010036\|Ga0126305_10586114	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300010371\|Ga0134125_10228840	All Organisms → cellular organisms → Bacteria	2067	Open in IMG/M
3300010373\|Ga0134128_10203595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	2228	Open in IMG/M
3300010373\|Ga0134128_12143846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	616	Open in IMG/M
3300010397\|Ga0134124_10158364	All Organisms → cellular organisms → Bacteria	2025	Open in IMG/M
3300010399\|Ga0134127_12424909	Not Available	604	Open in IMG/M
3300010403\|Ga0134123_12880879	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	550	Open in IMG/M
3300011106\|Ga0151489_1347437	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	772	Open in IMG/M
3300011107\|Ga0151490_1408071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	834	Open in IMG/M
3300012469\|Ga0150984_113694688	Not Available	573	Open in IMG/M
3300012469\|Ga0150984_122158824	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300012513\|Ga0157326_1085399	Not Available	523	Open in IMG/M
3300012907\|Ga0157283_10368400	Not Available	523	Open in IMG/M
3300012913\|Ga0157298_10301455	All Organisms → cellular organisms → Bacteria	568	Open in IMG/M
3300012939\|Ga0162650_100071090	Not Available	593	Open in IMG/M
3300012984\|Ga0164309_10535311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	903	Open in IMG/M
3300012986\|Ga0164304_11332614	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300012987\|Ga0164307_10424502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	986	Open in IMG/M
3300013296\|Ga0157374_11274106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	757	Open in IMG/M
3300013306\|Ga0163162_13144688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	530	Open in IMG/M
3300013308\|Ga0157375_11174832	All Organisms → cellular organisms → Bacteria → Proteobacteria	900	Open in IMG/M
3300014325\|Ga0163163_12994044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	527	Open in IMG/M
3300014745\|Ga0157377_10126618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1555	Open in IMG/M
3300015201\|Ga0173478_10625657	Not Available	563	Open in IMG/M
3300015374\|Ga0132255_101350428	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1076	Open in IMG/M
3300017792\|Ga0163161_11085509	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300017965\|Ga0190266_10327415	Not Available	813	Open in IMG/M
3300018027\|Ga0184605_10006190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	4369	Open in IMG/M
3300018027\|Ga0184605_10325362	Not Available	695	Open in IMG/M
3300018028\|Ga0184608_10027092	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2133	Open in IMG/M
3300018066\|Ga0184617_1003245	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2684	Open in IMG/M
3300018067\|Ga0184611_1001398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	5113	Open in IMG/M
3300018073\|Ga0184624_10009677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3315	Open in IMG/M
3300018073\|Ga0184624_10057999	All Organisms → cellular organisms → Bacteria → Proteobacteria	1585	Open in IMG/M
3300018476\|Ga0190274_11562229	All Organisms → cellular organisms → Bacteria	752	Open in IMG/M
3300018481\|Ga0190271_10747495	All Organisms → cellular organisms → Bacteria	1102	Open in IMG/M
3300018920\|Ga0190273_11405303	Not Available	610	Open in IMG/M
3300019269\|Ga0184644_1139404	Not Available	750	Open in IMG/M
3300019356\|Ga0173481_10601030	Not Available	579	Open in IMG/M
3300019361\|Ga0173482_10379860	Not Available	650	Open in IMG/M
3300019876\|Ga0193703_1002823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	2497	Open in IMG/M
3300021078\|Ga0210381_10065014	Not Available	1126	Open in IMG/M
3300021082\|Ga0210380_10017580	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3017	Open in IMG/M
3300021082\|Ga0210380_10116183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1189	Open in IMG/M
3300022756\|Ga0222622_10256051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1188	Open in IMG/M
3300022756\|Ga0222622_10479794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	886	Open in IMG/M
3300023072\|Ga0247799_1031210	Not Available	843	Open in IMG/M
3300024055\|Ga0247794_10035853	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Metazoa → Eumetazoa → Bilateria → Deuterostomia → Chordata → Craniata → Vertebrata → Gnathostomata → Chondrichthyes → Elasmobranchii → Selachii → Galeomorphii → Galeoidea → Orectolobiformes → Hemiscylliidae → Chiloscyllium → Chiloscyllium punctatum	1307	Open in IMG/M
3300025905\|Ga0207685_10018656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2269	Open in IMG/M
3300025907\|Ga0207645_10106392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Pseudomonadales → Pseudomonadaceae → Pseudomonas → Pseudomonas syringae group → Pseudomonas syringae group genomosp. 1 → Pseudomonas syringae	1813	Open in IMG/M
3300025918\|Ga0207662_10049471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2494	Open in IMG/M
3300025919\|Ga0207657_10039754	All Organisms → cellular organisms → Bacteria → Proteobacteria	4176	Open in IMG/M
3300025920\|Ga0207649_10886825	Not Available	699	Open in IMG/M
3300025925\|Ga0207650_10233897	All Organisms → cellular organisms → Bacteria	1483	Open in IMG/M
3300025960\|Ga0207651_10902698	All Organisms → cellular organisms → Bacteria → Proteobacteria	787	Open in IMG/M
3300026067\|Ga0207678_10859965	All Organisms → cellular organisms → Bacteria → Proteobacteria	801	Open in IMG/M
3300026118\|Ga0207675_101475492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → unclassified Methylovirgula → Methylovirgula sp. HY1	701	Open in IMG/M
3300026142\|Ga0207698_10881408	Not Available	901	Open in IMG/M
3300027310\|Ga0207983_1002903	All Organisms → cellular organisms → Bacteria	1836	Open in IMG/M
3300027310\|Ga0207983_1030355	Not Available	677	Open in IMG/M
3300027866\|Ga0209813_10161118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	809	Open in IMG/M
3300028608\|Ga0247819_10293605	Not Available	908	Open in IMG/M
3300028707\|Ga0307291_1036175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1167	Open in IMG/M
3300028713\|Ga0307303_10190731	Not Available	505	Open in IMG/M
3300028754\|Ga0307297_10142531	Not Available	813	Open in IMG/M
3300028754\|Ga0307297_10229017	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	656	Open in IMG/M
3300028768\|Ga0307280_10038967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1451	Open in IMG/M
3300028771\|Ga0307320_10139277	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	935	Open in IMG/M
3300028778\|Ga0307288_10059222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1334	Open in IMG/M
3300028807\|Ga0307305_10026322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2642	Open in IMG/M
3300028819\|Ga0307296_10593160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → Methylovirgula → unclassified Methylovirgula → Methylovirgula sp. HY1	606	Open in IMG/M
3300028872\|Ga0307314_10061682	Not Available	962	Open in IMG/M
3300028889\|Ga0247827_10247986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1012	Open in IMG/M
3300031184\|Ga0307499_10033767	All Organisms → cellular organisms → Bacteria	1177	Open in IMG/M
3300031740\|Ga0307468_100031845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2525	Open in IMG/M
3300031847\|Ga0310907_10109482	All Organisms → cellular organisms → Bacteria	1208	Open in IMG/M
3300031943\|Ga0310885_10317354	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	810	Open in IMG/M
3300032012\|Ga0310902_10170631	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1251	Open in IMG/M
3300032013\|Ga0310906_10258988	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1090	Open in IMG/M
3300033433\|Ga0326726_11467853	Not Available	664	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	66.94%
Host-Associated	Host-Associated	33.06%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	55.65%
Plants	Host-Associated → Plants	33.06%
Aquatic	Environmental → Aquatic	11.29%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	54.03%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.32%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.48%
Sediment	Environmental → Aquatic → Sediment	8.06%
Roots	Host-Associated → Plants → Roots	7.26%
Freshwater	Environmental → Aquatic → Freshwater	3.23%
Peat	Environmental → Terrestrial → Peat	0.81%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.39%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.06%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.26%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	6.45%
Loam	Environmental → Terrestrial → Soil → Loam	5.65%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.23%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.81%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.81%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.48%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.26%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	6.45%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	5.65%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.84%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.23%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.61%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.81%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.81%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.81%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.81%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	19.35%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.48%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	6.45%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	5.65%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.03%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	3.23%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	3.23%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.42%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.42%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.61%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.61%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.81%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.81%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.81%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.81%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.81%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.81%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300002075	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4	Host-Associated	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005104	Soil and rhizosphere microbial communities from Laval, Canada - mgHAC	Environmental	Open in IMG/M
3300005147	Soil and rhizosphere microbial communities from Laval, Canada - mgLMC	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006042	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3	Host-Associated	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006186	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4	Host-Associated	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006579	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012513	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510	Host-Associated	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012913	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2	Environmental	Open in IMG/M
3300012939	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t1i015	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018067	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_coex	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019269	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019361	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)	Environmental	Open in IMG/M
3300019876	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3a2	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300023072	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S151-409C-6	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026067	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027310	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB (SPAdes)	Environmental	Open in IMG/M
3300027866	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)	Host-Associated	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028713	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184	Environmental	Open in IMG/M
3300028754	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_157	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M

Geographical Distribution

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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069053

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_23396461	3300000033	Soil	MRHACVAAAVIATIASIGMIASPAFAQSQRKAYQRASPAVSPGVYAGPRRGNTDPDPNVQFEIMRQQNWRKGG*
JGI10214J12806_127513262	3300000891	Soil	MKAIGIAIAVIALIASPALAQSRRKAPPPRASQATYPGVYPGSGRVNTDPDPNVQFEILR
JGI24738J21930_100084781	3300002075	Corn Rhizosphere	MRHICIAVMIAMIASIASPALAQSRRKAPTQYAPQATSPGXYTSRRGVNTDPDPNVQFEIMRQQNWRKGG*
C688J35102_1181818581	3300002568	Soil	MKRICIAATVIGMVAMIACPASAQSRRKAPTQYAPQATSPGVYTGRRGVNTDPDPNVQFEIMRQQNWRKGG*
Ga0063356_1064949612	3300004463	Arabidopsis Thaliana Rhizosphere	ICIAATVIGMVAVIASPVSAQSRRKAPTQYAPQATSPGVYTGRRGVNTDPDPNVQIEIMRQQNWRKGG*
Ga0062595_1005895081	3300004479	Soil	MKTIGIAVAVIALIASPALAQSRRKAPPPRAPQATYPGVYPGSGRVNTDPDPNVQFEILRQQNWRKGG*
Ga0062595_1006539431	3300004479	Soil	MKRICIAATVIGMVAMIALPAYAQSRRKAPTQYAPQATSPGVYTGRRGVNTDPDLNVQFEIMRQQNWRKGG*
Ga0062592_1020216212	3300004480	Soil	ICIAATVIGMVAMIAFPAYAQSRRKAPTQYAPQATSPGVYTGRRGVNTDPDPNVQFEIMRQQNWRKGG*
Ga0062591_1025838101	3300004643	Soil	MKRICIAATVIGMVAVIASPVSAQSRRKAPTQYAPQATSPGVYTGRRGVNTDPDPNVQFEIMRQQNWRKGG*
Ga0062594_1016961052	3300005093	Soil	MKRICIAATVIGMVAVIASPVSAQSRRKAPAQYAPQATSPGAYTGRRGVNTDPDPNVQFEIMRQQNWRKGG*
Ga0066818_10124372	3300005104	Soil	MRHICIAVMIAMIASIASPALAQSRRKAPTQYAPQATSPGMYTSRRGVNTDPDPNVQFEIMRQQNWRKGG*
Ga0066821_10076572	3300005147	Soil	MVAIIASPASAQSRRKAPTQYAPQATSPGAYTGRRGVSTDPDPNVQFEIMRQQNWRKGG*
Ga0066823_100423602	3300005163	Soil	MRHICIAVMIAMIASIASPALAQSRRKAPTQYAPQAPGMYTSRRGVNTDPDPNVQFEIMRQQNWRKGG*
Ga0066869_100004274	3300005165	Soil	MRHICIAVMIAMIASIASPALAQSRRKAPTQYAPQATSPGVYTGRRGVNTDPDPNVQFEIMRQQNWRKGG*
Ga0066810_100288862	3300005169	Soil	MRHICIAVMIAMIASIASPALAQSRRKAPTQYAPQATSPGAYTGRRGVSTDPDPNVQFEIMRQQNWRKGG*
Ga0070676_102349892	3300005328	Miscanthus Rhizosphere	ATVIGMVAMIASPAYAQSRRKALTQYAPQATSPGVYTGRRGVNTDPDPNVQFEIMRQQNWRKGG*
Ga0070690_1001698812	3300005330	Switchgrass Rhizosphere	MKRICIAATVIGMVAMIASPAYAQSRRKALTQYAPQATSPGVYTGRRGVNTDPDPNVQFEIMRQQNWRKGG*
Ga0070670_1009169882	3300005331	Switchgrass Rhizosphere	MKRICIAATVIGMVAIIASPASAQSRRKAPTQYAPQATSPGVYTSRRGVNTDPDPNVQFEIMRQQNWRKGG*
Ga0070687_1013129201	3300005343	Switchgrass Rhizosphere	MKRICIAATVIGMVAMIAFPAYAQSRRKAPTQYAPQATSPGVYTGRRGVNTDPDPNVQFEIMRQQNWRKGG*
Ga0070703_102820642	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MRHICIAVMIAMIASIASPALAQSRRKAPTQYAPQATSPGVYTSRRGVNTDPDPNVQFEIMRQQNWRKGG*
Ga0070711_1008645422	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MKTIGIAVALIALIASPALAQSKRKAPPPRAPQATYPGAYPGSGRVNTDPDPNVQFEILRQQNWRKGG*
Ga0068855_1003059113	3300005563	Corn Rhizosphere	MGHICIAVMIAMIASIASPALAQSRRKAPTQYAPQATSPGVYTSRRGVNTDPDPNVQFEIMRQQNWRKGG*
Ga0068861_1007646012	3300005719	Switchgrass Rhizosphere	VAMIALPAYAQSRRKAPTQYAPQATSPGVYTGRRGVNTDPDPNVQFEIMRQQNWRKGG*
Ga0068861_1017654182	3300005719	Switchgrass Rhizosphere	MKTIGIAVAVIALIASPALAQSRRKAPPPRAPQATYPGVYPGSGRVNTDPDPNVQFEILRQQNW
Ga0068851_101057432	3300005834	Corn Rhizosphere	CAMKRICIAATVIGMVAVIASPVSAQSRRKAPTQYAPQATSPGVYTGRRGVNTDPDPNVQFEIMRQQNWRKGG*
Ga0075365_100077643	3300006038	Populus Endosphere	MRHVCIAVVIAMIASPALAQSRRHAPAQRAPQAAYPGVYPSQGRVNTDPDPNVQFEIMRQQNWRKGG*
Ga0075365_101002623	3300006038	Populus Endosphere	MRPICIAVMIAMIASIASPALAQSRRKAPTQYAPQATSPGVYSGRRGVNTDPDPNVQFEIMRQQNWRKGG*
Ga0075365_105401852	3300006038	Populus Endosphere	MKRICIAATVIGMVAMIAFPAYAQSRRKAPKQYAPQATSPGVYTGRRGVNTDPDPNVQFEIMRQQNWRKGG*
Ga0075365_108908321	3300006038	Populus Endosphere	MKRICIAATVIGMVAMIASPAYAQPRRKAPTQYAPQATSSGVYTPRRGVNTDPDPNVQFEIMRQQNWRKGG*
Ga0075368_102442691	3300006042	Populus Endosphere	MKHICLAATVIGMVAMIAMIASPASAQSRRKAPTQYAPQATSPGVYSGRRGVNTDPDPNVQFEIMRQQNWRKGG*
Ga0075024_1004285942	3300006047	Watersheds	MRHVCVAAAVIATIALIAMIASPAFAQSQRRAYRAPQAASPGVYAGPRRGNTDPDPNVQFEIMRQQNWRKGG*
Ga0075364_101784082	3300006051	Populus Endosphere	MRHICIAVMIAMIASIASPALAQSRRKAPTQYAPQATSPGVYSGRRGVNTDPDPNVQFEIMRQQNWRKGG*
Ga0075369_106607761	3300006186	Populus Endosphere	MRPICIAVMIAMIASIASPALAQSRRKAPTQYAPQATSPGVYTGRRGVNTDPDPNVQFEIMRQQNWRKGG*
Ga0074056_118071043	3300006574	Soil	MKRICIAATVIGMVAMIASPAYAQSRRKAPTQYAPQATSPGVYTGRRGVNTDPDPNVQFEIMRQQNWRKGG*
Ga0074054_100192092	3300006579	Soil	MRHVCIAVMIAMIASIASPALAQSRRQVPVHRAPQSAYPGVYPGQGRVNTDHPNVQFEILRQQNWRKGG*
Ga0074048_101206372	3300006581	Soil	MKRICIAATVIGMVAIIASPASAQSRRKAPTQYAPQATSPGAYTGRRGVNTDPDPNVQFEIMRQQNWRKGG*
Ga0068865_1000174241	3300006881	Miscanthus Rhizosphere	AMIASIASPALAQSRRKAPTQYAPQATSPGVYTGRRGVNTDPDPNVQFEIMRQQNWRKGG
Ga0074063_101304752	3300006953	Soil	MKRICIAATVIGMVAIIASPASAQSRRKAPTQYAPQATSPGAYTGRRGVNTDPDPNVQFEIMRQQNWR
Ga0105251_103599541	3300009011	Switchgrass Rhizosphere	AMIASIASPALAQSRRKAPTQYAPQATSPGMYTSRRGVNTDPDPNVQFEIMRQQNWRKGG
Ga0111539_119482451	3300009094	Populus Rhizosphere	MPVTAEVRMKRICIAATVIGMVAMIAAPAYAQSRRKAPTQYAPQATSPGMYTSRRGVNTDPDPNVQFEIMRQQNWRKGG*
Ga0105245_105219992	3300009098	Miscanthus Rhizosphere	MIAMIASIASPALAQSRRKAPTQYAPQATSPGMYTSRRGVNTDPDPNVQFEIMRQQNWRKGG*
Ga0105241_100920463	3300009174	Corn Rhizosphere	MIAMIASIASPALAQSRRKAPTQYAPQATSPGVYTGRRGVNTDPDPNVQFEIMRQQNWRKGG*
Ga0105242_115870982	3300009176	Miscanthus Rhizosphere	MRHVCIAVMIAMIASIASPALAQSRRQVPVHRAPQSAYPGVYPGQGRVNTDPDPNVQFEILRQQNWRKGG*
Ga0105237_101212552	3300009545	Corn Rhizosphere	MIAMIASIASPALAQSRRKAPTQYAPQATSPGVYTSRRGVNTDPDPNVQFEIMRQQNWRKGG*
Ga0126305_105861142	3300010036	Serpentine Soil	MIAMIASIASPASAQSRRKAPAQYAPQATSPGVYSGRRGVNTDPDPNVQFEIMRQQNWRKGG*
Ga0134125_102288402	3300010371	Terrestrial Soil	MKRICIAATVIGMVAMIAFPAYAQSRRKAPTQYAPQASSPGVYTGRRGVNTDPDPNVQFEIMRQQNWRKGG*
Ga0134128_102035952	3300010373	Terrestrial Soil	MIAMIASIASPALAQSRRKAPTQYAPQATSPGAYTGRRGVNTDPDPNVQFEIMRQQNWRKGG*
Ga0134128_121438462	3300010373	Terrestrial Soil	MKHICLAATIIGMVAMIAMIASPASAQSRRKSPTQYAPQAPSPGGYTGRRGVNTDPDPNVQFEILRQQNWRKGG*
Ga0134124_101583643	3300010397	Terrestrial Soil	MIAMIASIASPALAQSRRQVPVHRAPQSAYPGVYPGQGRVNTDPDPNVQFEIMRQQNWRKGG*
Ga0134127_124249091	3300010399	Terrestrial Soil	MKRICIAATVIGMVAMIALPAYAQSRRKAPAQYAPQATSPGGYTGRRGVNTDPDPNVQFEILRQQNWRKGG*
Ga0134123_128808792	3300010403	Terrestrial Soil	MRHVCIAVMIAMIAIASPALAQSRHKAPIHRAPQSAYPGVYPGQGRVNTDPDPNVQFEILRQQNWRKGG*
Ga0151489_13474371	3300011106	Soil	MRHICIAVMIAMIASIASPALAQSRRKAPTQYAPQATSPGMYTSRRGVNTDPDPNVQFEIMRQQNWRK
Ga0151490_14080711	3300011107	Soil	MRHACVAAAVISTFALIAMIASPAFAQSQRRAYRAPQAASPGVYAGPRRGNTDPDPNVQFEIMRQQNWRKGG*
Ga0150984_1136946882	3300012469	Avena Fatua Rhizosphere	MKRICIAATVIGMVAMIASPASAQSRRKAPTQYAPQATSPGVYTGRRGVNTDPDPNVQFEIMRQQNWRKGG*
Ga0150984_1221588242	3300012469	Avena Fatua Rhizosphere	MCAMKRICIAAIVIGMVAMIAFPAYAQSRRKAPTQYAPQATSPGVYTGRRGVNTDPDLNVQFEIMRQQNWRKGG*
Ga0157326_10853991	3300012513	Arabidopsis Rhizosphere	MKRICIAATVIGMVAMIACPASAQSRRKAPTQYAPQATSPGVYTGRRGVNNDPDPNVQFEIMRQQNWRKGG*
Ga0157283_103684001	3300012907	Soil	MIAMIASIASPALAQSRRKAPTQYAPQATSPGVYSGRRGVNTDPGPNVQFEIMRQQNWRKGG*
Ga0157298_103014552	3300012913	Soil	VIALIASPALAQSRRKAPPPRAPQATYPGVYPGSGRVNTDPDPNVQFEILRQQNWRKGG*
Ga0162650_1000710901	3300012939	Soil	MIAMIASIASPALAQSRRKAPIQYAPQATSPGVYTGRRGVNTDPDPNVQFEIMRQQNWRKGG*
Ga0164309_105353112	3300012984	Soil	MIAMIASIASPALAQSRRQVPVHRAPQSAYPGVYPGQGRVNTDPDPNVQFEILRQQNWRKGG*
Ga0164304_113326141	3300012986	Soil	MIAMIAIASPALAQSRHKAPIHRAPQSAYPGVYPGQGRVNTDPDPNVQFEILRQQNWRKGG*
Ga0164307_104245022	3300012987	Soil	MKTIGIAVAVIALIASPALAQSRRKTPPRAPQATYPGVYPGSGRVNTDPDPNVQFEILRQQNWRKGG*
Ga0157374_112741062	3300013296	Miscanthus Rhizosphere	MKRICIAATVIGMVAIIASPASAQSRRKAPTQYAPQATSPGAYTGRRGVNTDPDPNVQFEIMRQQ
Ga0163162_131446882	3300013306	Switchgrass Rhizosphere	MPVTAEVRMKRICIAATVIGMVAMIASPAYAQSRRKAPTQYAPQATSPGVYTGRRGVNTDPDPNVQFEIMRQQNWRKGG*
Ga0157375_111748322	3300013308	Miscanthus Rhizosphere	MKRICIAATVIGMVAIIASPASAQSRRKAPTQYAPQATSPGAYTGLRGVNTDPDPNVQFEIMRQQNWRKGG*
Ga0163163_129940442	3300014325	Switchgrass Rhizosphere	MKRICIAATVIGMVAIIASPASAQSRRKAPTQYAPQATSPGAYTGRRGVNTDPDPNVQFEIMRQQNWRK
Ga0157377_101266182	3300014745	Miscanthus Rhizosphere	MIAMIASIASPALAQSRRKAPTQPAPQATSPGVYTSRRGVNTDPDPNVQFEIMRQQNWRKGG*
Ga0173478_106256572	3300015201	Soil	RSQRRRAMKIVGIAIAVIALIASPALAQSRRKAPPPRAPQATYPGVYPGSGRVNTDPDPNVQFEILRQQNWRKGG*
Ga0132255_1013504282	3300015374	Arabidopsis Rhizosphere	MIAMIASIASPALAQSRRKAPTQYAPQATSPGMYTSRRGVNTDPDPNVQFEIMCQQNWRKGG*
Ga0163161_110855092	3300017792	Switchgrass Rhizosphere	MRHVCIAVMIAMIASIASPALAQSRRQVPVHRAPQSAYPGVYPGQGRVNTDPDPNVQFEILRQQNWRKGG
Ga0190266_103274152	3300017965	Soil	MRPICIAVMIAMIGSIASPALAQSRRKAPTQYAPQATSPGVYTGRRGVNTDPDPNVQFEIMRQQNWRKGG
Ga0184605_100061904	3300018027	Groundwater Sediment	MRHACVAAAVIATIAMIASPAFAQQRKAYPQRAPQATSPGGYAAPRRGNTDPDPNVQFEIMRQQNWRKGG
Ga0184605_103253622	3300018027	Groundwater Sediment	MRPICIAVMIAMIASIASPALAQSRRKAPTQYAPQATSPGVYSGRRGINTDPDPNVQFEIMRQQNWRKGG
Ga0184608_100270923	3300018028	Groundwater Sediment	MRHACVAAAVIATIAMIASPAFAQQRKAYPQRTPQATSPGGYAAPRRGNTDPDPNVQFEIMRQQNWRKGG
Ga0184617_10032454	3300018066	Groundwater Sediment	MRHICIAVMIAMIASIASPASAQSRRKAPAQYAPQATSPGVYSGRRGVNTDPDPNVQFEIMRQQNWRKGG
Ga0184611_10013985	3300018067	Groundwater Sediment	MRRACVAAAVIATIASIGMIASPAFAQSQRKAYQRASPAVSPGVYAGPRRGNTDPDPNVQFEIMRQQNWRKGG
Ga0184624_100096772	3300018073	Groundwater Sediment	MRHACVAAAVIATIASIGMIASPAFAQSQRKAYQRASPAVSPGVYAGPRRGNTDPDPNVQFEIMRQQNWRKGG
Ga0184624_100579992	3300018073	Groundwater Sediment	MKHICIAATVIGMVAMIASPAYAQSRRKAPTQYTPQATSPGVYTGRRGVNTDPDPNVQFEIMRQQNWRKGG
Ga0190274_115622292	3300018476	Soil	MKHICIAATVIGMVAMIASPAYAQSRRKAPTQYAPQATSPGVYTGRRGVNTDPDPNVQFEIMRQQNWRKGG
Ga0190271_107474951	3300018481	Soil	FAVMIAMIASIASPTLAQSRRKAPTQYAPQATSPGVYTGRRGVNTDPDPNVQFEIMRQQNWRKGG
Ga0190273_114053031	3300018920	Soil	MKRICIAATVIGMIAMIASPASAQSRRKAPTQYAPQATSPGPYSGRRGVNTDPDPNVQFEIMRQQNWRKGG
Ga0184644_11394042	3300019269	Groundwater Sediment	MRHICIAVMIAMIASIASPALAQSRRKAPTQYAPQATSPGVYSGRRGVNTDPDPNVQFEIMRQQNWRKGG
Ga0173481_106010301	3300019356	Soil	MKTIGIAVAVIALIASPALAQSRRKAPPPRAPQATYPGVYPGSGRVNTDPDPNVQFEILRQQNWRKGG
Ga0173482_103798602	3300019361	Soil	MRPICIAVMIAMIASIASPALAQSRRKAPTQYAPQATSPGVYSGRRGVNTDPDPNVQFEIMRQQNWRKGG
Ga0193703_10028233	3300019876	Soil	MRHICIAVMIAMIASIASPALAQSRRKAPTQYAPQATSPGVYTGRRGVNTDPDPNVQFEIMRQQNWRKGG
Ga0210381_100650141	3300021078	Groundwater Sediment	MRHICIAVMIAMIASIASPALAQSRRKAPTQYAPQATSPGVSTGRRGVNTDPDPNVQFEIMRQQNWRKGG
Ga0210380_100175803	3300021082	Groundwater Sediment	MKRICIAATVIGMVAMIASPAYAQSRRKAPTQYAPQATSPGVYTGRRGVNTDPDPNVQFEIMRQQNWRKGG
Ga0210380_101161832	3300021082	Groundwater Sediment	MRHACVAAAVIAMIAMIASPAFAQQRKAYPQRAPQATAPGGYAAPRRGNTDPDPNVQFEIMRQQNWRKGG
Ga0222622_102560512	3300022756	Groundwater Sediment	MRHICIAVMIAMIASIASPALAQSRRKAPTQYAPQATSPGVYSGRRGVNTDPDPNVQFEIMRQQ
Ga0222622_104797942	3300022756	Groundwater Sediment	MRHACVAAAVIATIASIGMIASPAFAQSQRKAYQRAPQAVSPGVYAGPRRGNTDPDPNVQFEIMRQQNWRKGG
Ga0247799_10312102	3300023072	Soil	IALIASPALAQSRRKAPPPRAPQATYPGVYPGSGRVNTDPDPNVQFEILRQQNWRKGG
Ga0247794_100358531	3300024055	Soil	KTIGIAVAVIALIASPALAQSRRKAPPPRAPQATYPGVYPGSGRVNTDPDPNVQFEILRQQNWRKGG
Ga0207685_100186563	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MRHICIAVMIAMIASIASPALAQSRRKAPTQYAPQATSPGMYTSRRGVNTDPDPNVQFEILRQQNWRKGG
Ga0207645_101063922	3300025907	Miscanthus Rhizosphere	MRHVCIAVMIAMIASIASPALAQSRRKAPTQYAPQATSPGVYTGRRGVNTDPDPNVQFEIMRQQNWRKGG
Ga0207662_100494712	3300025918	Switchgrass Rhizosphere	MRHICIAVMIAMIASIASPALAQSRRKAPTQYAPQATSPGVYTGRRGVNTDPDLNVQFEIMRQQNWRKGG
Ga0207657_100397545	3300025919	Corn Rhizosphere	MKRICIAATVIGMVAMIASPAYAQSRRKALTQYAPQATSPGAYTGRRGVNTDPDPNVQFDDHASAELAQG
Ga0207649_108868251	3300025920	Corn Rhizosphere	ATVIGMVAVIASPVSAQSRRKAPTQYAPQATSPGVYTGRRGVNTDPDPNVQFEIMRQQNWRKGG
Ga0207650_102338972	3300025925	Switchgrass Rhizosphere	MKRICIAATVIGMVAIIASPASAQSRRKAPTQYAPQATSPGVYTSRRGVNTDPDPNVQFEIMRQQNWRKGG
Ga0207651_109026982	3300025960	Switchgrass Rhizosphere	MKRICIAATVIGMVAVIASPVSAQSRRKAPTQYAPQATSPGVYTGRRGVNTDPDPNVQFEIMRQQNWRKGG
Ga0207678_108599652	3300026067	Corn Rhizosphere	MKRICIAATVIGMVAMIAFPAYAQSRRKAPTQYAPQATSPGVYTGRRGVNTDPDPNVQFEIMRQQNWRKGG
Ga0207675_1014754922	3300026118	Switchgrass Rhizosphere	MKTIGIAVAVIALIASPALAQSRRKAPPPRAPQATYPGVYPGSGRVNTDPDPNVQFEILRQQNWRKG
Ga0207698_108814082	3300026142	Corn Rhizosphere	CAMRHICIAVMIAMIASIASPALAQSRRKAPTQYAPQATSPGVYTSRRGVNTDPDPNVQFEIMRQQNWRKGG
Ga0207983_10029033	3300027310	Soil	MRHICIAVMIAMIASIASPALAQSRRKAPTQYAPQAPGMYTSRRGVNTDPDPNVQFEIMRQQNWRKGG
Ga0207983_10303551	3300027310	Soil	ATVIGMVAIIASPASAQSRRKAPTQYAPQATSPGAYTGRRGVNTDPDPNVQFEIMRQQNWRKGG
Ga0209813_101611182	3300027866	Populus Endosphere	MKHICLAATVIGMVAMIAMIASPASAQSRRKAPTQYAPQATSPGVYSGRRGVNTDPDPNVQFEIMRQQNWRKGG
Ga0247819_102936051	3300028608	Soil	ICIAATVIGMVAMIASPAYAQSRRKAPTQYAPQATSPGVYTGRRGVNTDPDPNVQFEIMRQQNWRKGG
Ga0307291_10361753	3300028707	Soil	MRHACVAAAVIATIAMIASPAFAQQRKAYPQRAPQATSPGGYAAPRRGNTDPDPNVQFEIMRQ
Ga0307303_101907311	3300028713	Soil	TMRHACVAAAVIATIAMIASPAFAQQRKAYPQRAPQATSPGGYAAPRRGNTDPDPNVQFEIMRQQNWRKGG
Ga0307297_101425311	3300028754	Soil	RCAMRHICIAVMIAMIASIASPASAQSRRKAPAQYAPQATSPGVYSGRRGVNTDPDPNVQFEIMRQQNWRKGG
Ga0307297_102290171	3300028754	Soil	MRHACVAAAVIATIASIGMIASPAFAQSQRKAYQRAPQAVSPGVYAGPRRGNTDPDPNVQFEIMRQQN
Ga0307280_100389672	3300028768	Soil	MRHICIAVMIAMIASIASPALAQSRRKAPTQYAPQATSPGVYTCRRGVNTDPDPNVQFEIMRQQNWRKGG
Ga0307320_101392771	3300028771	Soil	MRHACVAAAVIATIASIGMIASSAFAQSQRKAYQRAPQAVSPGVYAGPRRGNTDPDPNVQFEIMRQQNWRKGG
Ga0307288_100592222	3300028778	Soil	MRHACVAAAVIATIAMIASPAFAQQRKAYPQRAPQATSPGGYAAPRRGNTDPDPNVQFEIMRQQNWSKGG
Ga0307305_100263224	3300028807	Soil	MRHACVAAVVIATIAMIASPAFAQQRKAYPQRAPQATSPGGYAAPRRGNTDPDPNVQFEIMRQQNWRKGG
Ga0307296_105931602	3300028819	Soil	MRHACVAAAVIATIAMIASPAFAQQRKAYPQRAPQATSPGGYAVPRRGNTDPDPNVQFEIMRQQNWRKGG
Ga0307314_100616822	3300028872	Soil	VAAAVIAAIAMIASPAFAQQRKAYPQRAPQATSPGGYAAPRRGNTDPDPNVQFEIMRQQNWSKGG
Ga0247827_102479861	3300028889	Soil	MKRICIATVIGMVAMIASPAYAQSRRKAPTQYAPQATSPGVYTGRRGVNTDPDPNVQFEIMRQQNWRKGG
Ga0307499_100337671	3300031184	Soil	MRHICIAVMIAMIASIASPALAQSRRKAPTQYAPQATSPGMYTSRRGVNTDPDPNVQFEIMRQQNWRKGG
Ga0307468_1000318453	3300031740	Hardwood Forest Soil	MRHVCIAVMIAMIASIASPALAQSRRKAPTQYAPQATSPGMYTSRRGVNTDPDPNVQFEIMRQQNWRKGG
Ga0310907_101094822	3300031847	Soil	MKRICIAATVIGMVAMIAAPAYAQSRRKAPTQYAPQATSPGMYTSRRGVNTDPDPNVQFEIMRQQNWRKGG
Ga0310885_103173542	3300031943	Soil	MRHICIAVMIAMIASIASPALAQSRRKAPTQYAPQATSPGMYTSRRGVNTDPDPNVQF
Ga0310902_101706311	3300032012	Soil	MKRICIAATVIGMVAMIASPAYAQSRRKAPTQYAPQATSPGVYTARRGVNTDPDPNVQ
Ga0310906_102589882	3300032013	Soil	MKTIGIAVALIALIASPALAQSKRKAPPPRAPQATYPGAYPGSGRVNTDPDPNVQFEILRQQNWRKGG
Ga0326726_114678532	3300033433	Peat Soil	MRHACVAAAVITTFALIAMIASPAFAQSKRKAYPQRAPQATAPGGYAAPRRGDTDPDPNVQFEIMRQQNWRKGG

Hidden Markov Model


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