Metagenome / Metatranscriptome Family F069030

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F069030
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	88 residues
Representative Sequence	VKYNKKDKKEQPGDVLGISNPGGPKLPHPPSDGSTPQGIDVRGERPRHWGNEDIPQSDGASGIDMGGGGDGPQVEAEHPRPKVEDEL
Number of Associated Samples	87
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	78.23 %
% of genes near scaffold ends (potentially truncated)	30.65 %
% of genes from short scaffolds (< 2000 bps)	83.87 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.13

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (19.355 % of family members)
Environment Ontology (ENVO)	Unclassified (26.613 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (51.613 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 0.00% Coil/Unstructured: 100.00%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.13
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.13
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF01434	Peptidase_M41	56.45
PF01103	Omp85	4.03
PF13091	PLDc_2	3.23
PF00255	GSHPx	2.42
PF00483	NTP_transferase	0.81
PF07238	PilZ	0.81
PF06480	FtsH_ext	0.81
PF04956	TrbC	0.81
PF01066	CDP-OH_P_transf	0.81
PF01425	Amidase	0.81
PF04546	Sigma70_ner	0.81
PF05448	AXE1	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG0465	ATP-dependent Zn proteases	Posttranslational modification, protein turnover, chaperones [O]	57.26
COG0386	Thioredoxin/glutathione peroxidase BtuE, reduces lipid peroxides	Defense mechanisms [V]	2.42
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.81
COG0558	Phosphatidylglycerophosphate synthase	Lipid transport and metabolism [I]	0.81
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.81
COG1183	Phosphatidylserine synthase	Lipid transport and metabolism [I]	0.81
COG1506	Dipeptidyl aminopeptidase/acylaminoacyl peptidase	Amino acid transport and metabolism [E]	0.81
COG3458	Cephalosporin-C deacetylase or related acetyl esterase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.81
COG3838	Type IV secretory pathway, VirB2 component (pilin)	Intracellular trafficking, secretion, and vesicular transport [U]	0.81
COG5050	sn-1,2-diacylglycerol ethanolamine- and cholinephosphotranferases	Lipid transport and metabolism [I]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	86.29 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.42 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.81 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	84.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.42 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.81 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	84.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.42 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	0.81 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	84.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.42 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	0.81 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	84.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.42 %
Lachnospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	0.81 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	84.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.42 %
Blautia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Blautia	0.81 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	84.68 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.42 %
Blautia schinkii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Blautia → Blautia schinkii	0.81 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886013\|SwBSRL2_contig_1214351	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	829	Open in IMG/M
3300000956\|JGI10216J12902_100233385	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	715	Open in IMG/M
3300000956\|JGI10216J12902_100616096	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1485	Open in IMG/M
3300000956\|JGI10216J12902_100777295	All Organisms → cellular organisms → Bacteria → Proteobacteria	4145	Open in IMG/M
3300000956\|JGI10216J12902_101946301	All Organisms → cellular organisms → Bacteria → Acidobacteria	15054	Open in IMG/M
3300000956\|JGI10216J12902_105271111	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1495	Open in IMG/M
3300000956\|JGI10216J12902_124086932	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	627	Open in IMG/M
3300003319\|soilL2_10049660	All Organisms → cellular organisms → Bacteria	6698	Open in IMG/M
3300004156\|Ga0062589_101854817	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300004463\|Ga0063356_100163574	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2561	Open in IMG/M
3300004463\|Ga0063356_100269992	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2080	Open in IMG/M
3300004463\|Ga0063356_100347060	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1873	Open in IMG/M
3300004463\|Ga0063356_104195983	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	620	Open in IMG/M
3300005290\|Ga0065712_10206001	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1090	Open in IMG/M
3300005294\|Ga0065705_10167418	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1716	Open in IMG/M
3300005333\|Ga0070677_10112267	All Organisms → cellular organisms → Bacteria	1218	Open in IMG/M
3300005333\|Ga0070677_10727712	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	561	Open in IMG/M
3300005356\|Ga0070674_100870200	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	783	Open in IMG/M
3300005438\|Ga0070701_10819902	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300005719\|Ga0068861_100585908	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1022	Open in IMG/M
3300005840\|Ga0068870_11089355	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	574	Open in IMG/M
3300005844\|Ga0068862_102008312	All Organisms → cellular organisms → Bacteria	589	Open in IMG/M
3300006042\|Ga0075368_10195878	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	854	Open in IMG/M
3300006048\|Ga0075363_100960120	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525	Open in IMG/M
3300006196\|Ga0075422_10031504	All Organisms → cellular organisms → Bacteria	1849	Open in IMG/M
3300006846\|Ga0075430_100682941	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	846	Open in IMG/M
3300006876\|Ga0079217_10029036	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2041	Open in IMG/M
3300006876\|Ga0079217_11622577	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300006880\|Ga0075429_101245186	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	649	Open in IMG/M
3300006881\|Ga0068865_100936125	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	755	Open in IMG/M
3300006894\|Ga0079215_10097326	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1286	Open in IMG/M
3300006894\|Ga0079215_10498647	All Organisms → cellular organisms → Bacteria	758	Open in IMG/M
3300006894\|Ga0079215_11699272	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Blautia → Blautia schinkii	505	Open in IMG/M
3300006918\|Ga0079216_10311339	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	938	Open in IMG/M
3300006918\|Ga0079216_11578282	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300007004\|Ga0079218_10368383	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1206	Open in IMG/M
3300007004\|Ga0079218_11402364	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	746	Open in IMG/M
3300009078\|Ga0105106_10656369	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	750	Open in IMG/M
3300009087\|Ga0105107_10010642	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	6337	Open in IMG/M
3300009100\|Ga0075418_11028956	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	891	Open in IMG/M
3300009147\|Ga0114129_10485799	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1615	Open in IMG/M
3300009147\|Ga0114129_12179452	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300009156\|Ga0111538_13330450	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300009553\|Ga0105249_10053067	All Organisms → cellular organisms → Bacteria	3705	Open in IMG/M
3300009610\|Ga0105340_1007305	All Organisms → cellular organisms → Bacteria	4435	Open in IMG/M
3300009610\|Ga0105340_1333779	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	667	Open in IMG/M
3300010400\|Ga0134122_11138927	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	776	Open in IMG/M
3300011332\|Ga0126317_10879590	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300011333\|Ga0127502_10173455	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300011400\|Ga0137312_1056833	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	658	Open in IMG/M
3300012899\|Ga0157299_10050020	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	933	Open in IMG/M
3300012902\|Ga0157291_10419033	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
3300012912\|Ga0157306_10241273	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632	Open in IMG/M
3300014326\|Ga0157380_10049057	All Organisms → cellular organisms → Bacteria	3328	Open in IMG/M
3300015360\|Ga0163144_10024700	All Organisms → cellular organisms → Bacteria	11774	Open in IMG/M
3300015371\|Ga0132258_10123906	All Organisms → cellular organisms → Bacteria → Proteobacteria	6147	Open in IMG/M
3300015371\|Ga0132258_11851672	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1520	Open in IMG/M
3300015371\|Ga0132258_13049884	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1159	Open in IMG/M
3300015371\|Ga0132258_13317368	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1107	Open in IMG/M
3300015372\|Ga0132256_101042369	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	933	Open in IMG/M
3300015373\|Ga0132257_100662783	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1294	Open in IMG/M
3300015373\|Ga0132257_102750685	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300017789\|Ga0136617_10021588	All Organisms → cellular organisms → Bacteria	5738	Open in IMG/M
3300017965\|Ga0190266_10085047	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1251	Open in IMG/M
3300018031\|Ga0184634_10082825	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1380	Open in IMG/M
3300018073\|Ga0184624_10049744	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1693	Open in IMG/M
3300018073\|Ga0184624_10121227	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1133	Open in IMG/M
3300018083\|Ga0184628_10429455	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	689	Open in IMG/M
3300018422\|Ga0190265_10256869	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1797	Open in IMG/M
3300018429\|Ga0190272_10304264	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1238	Open in IMG/M
3300018429\|Ga0190272_10857572	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	845	Open in IMG/M
3300018429\|Ga0190272_12233239	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	588	Open in IMG/M
3300018429\|Ga0190272_12537202	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	559	Open in IMG/M
3300018429\|Ga0190272_13140580	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300018432\|Ga0190275_10366025	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1440	Open in IMG/M
3300018432\|Ga0190275_10391970	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1396	Open in IMG/M
3300018469\|Ga0190270_10018292	All Organisms → cellular organisms → Bacteria	4241	Open in IMG/M
3300018469\|Ga0190270_13008390	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	533	Open in IMG/M
3300018476\|Ga0190274_10482143	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1233	Open in IMG/M
3300018476\|Ga0190274_11549583	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	755	Open in IMG/M
3300018481\|Ga0190271_10078678	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2948	Open in IMG/M
3300018481\|Ga0190271_10254034	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1792	Open in IMG/M
3300018481\|Ga0190271_12850986	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300019356\|Ga0173481_10702938	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300019377\|Ga0190264_11079168	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	652	Open in IMG/M
3300019377\|Ga0190264_11712333	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300019377\|Ga0190264_12229476	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300020186\|Ga0163153_10098915	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1742	Open in IMG/M
3300020195\|Ga0163150_10020020	All Organisms → cellular organisms → Bacteria → Acidobacteria	6247	Open in IMG/M
3300025315\|Ga0207697_10163497	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	971	Open in IMG/M
3300025893\|Ga0207682_10136630	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1097	Open in IMG/M
3300025923\|Ga0207681_10162508	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1685	Open in IMG/M
3300025923\|Ga0207681_10745777	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	816	Open in IMG/M
3300025930\|Ga0207701_10471150	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1077	Open in IMG/M
3300025930\|Ga0207701_11132295	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	647	Open in IMG/M
3300025933\|Ga0207706_10159350	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1984	Open in IMG/M
3300027533\|Ga0208185_1035994	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1210	Open in IMG/M
3300027637\|Ga0209818_1122127	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	709	Open in IMG/M
3300027639\|Ga0209387_1051535	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	907	Open in IMG/M
3300027682\|Ga0209971_1087539	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	760	Open in IMG/M
3300027818\|Ga0209706_10006685	All Organisms → cellular organisms → Bacteria → Proteobacteria	6012	Open in IMG/M
3300027866\|Ga0209813_10070996	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1132	Open in IMG/M
3300027876\|Ga0209974_10187871	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	759	Open in IMG/M
3300027886\|Ga0209486_10065734	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1850	Open in IMG/M
3300027907\|Ga0207428_10000301	All Organisms → cellular organisms → Bacteria	65171	Open in IMG/M
3300027979\|Ga0209705_10103103	All Organisms → cellular organisms → Bacteria	1551	Open in IMG/M
3300027979\|Ga0209705_10625250	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300028380\|Ga0268265_11757725	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300028889\|Ga0247827_10761802	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300031228\|Ga0299914_11199629	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300031229\|Ga0299913_11302344	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	684	Open in IMG/M
3300031731\|Ga0307405_11000256	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	713	Open in IMG/M
3300031854\|Ga0310904_10150561	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1351	Open in IMG/M
3300031854\|Ga0310904_10759045	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	675	Open in IMG/M
3300031858\|Ga0310892_10435741	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	861	Open in IMG/M
3300031911\|Ga0307412_11150732	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	693	Open in IMG/M
3300031944\|Ga0310884_10025576	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2441	Open in IMG/M
3300031944\|Ga0310884_10676725	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300032013\|Ga0310906_10952140	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300032075\|Ga0310890_10543518	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	891	Open in IMG/M
3300032144\|Ga0315910_11495619	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	527	Open in IMG/M
3300034115\|Ga0364945_0218443	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584	Open in IMG/M
3300034128\|Ga0370490_0011505	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3028	Open in IMG/M
3300034148\|Ga0364927_0019727	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1583	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	66.13%
Host-Associated	Host-Associated	33.87%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.81%
Plants	Host-Associated → Plants	33.87%
Aquatic	Environmental → Aquatic	15.32%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	49.19%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.13%
Rhizoplane	Host-Associated → Plants → Rhizoplane	15.32%
Freshwater	Environmental → Aquatic → Freshwater	8.87%
Sediment	Environmental → Aquatic → Sediment	6.45%
Roots	Host-Associated → Plants → Roots	2.42%
Floodplain	Environmental → Terrestrial → Floodplain	1.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	47.58%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.45%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.65%
Sediment	Environmental → Aquatic → Freshwater → Sediment	4.03%
Lake	Environmental → Aquatic → Freshwater → Lake	2.42%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	2.42%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	1.61%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.61%
Ice	Environmental → Aquatic → Freshwater → Ice	0.81%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.81%
Loam	Environmental → Terrestrial → Soil → Loam	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.77%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	11.29%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.45%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.45%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.65%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	4.03%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	2.42%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	2.42%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	1.61%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	1.61%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.61%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.81%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	19.35%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	9.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.45%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.84%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.84%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	4.84%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	4.03%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	3.23%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.23%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.23%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	2.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.42%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	2.42%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	1.61%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.61%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	1.61%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.61%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.81%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.81%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.81%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886013	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006042	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3	Host-Associated	Open in IMG/M
3300006048	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009610	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011332	Soil microbial communities from California, USA to study soil gas exchange rates - SR-CA-SC2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011333	Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011400	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT133_2	Environmental	Open in IMG/M
3300012899	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015360	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019356	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300020186	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP6.IB-1	Environmental	Open in IMG/M
3300020195	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.P2.IB	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027533	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 (SPAdes)	Environmental	Open in IMG/M
3300027637	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200 (SPAdes)	Environmental	Open in IMG/M
3300027639	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control (SPAdes)	Environmental	Open in IMG/M
3300027682	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027818	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027866	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)	Host-Associated	Open in IMG/M
3300027876	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027979	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031731	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1	Host-Associated	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031944	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M
3300034128	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_16	Environmental	Open in IMG/M
3300034148	Sediment microbial communities from East River floodplain, Colorado, United States - 18_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
SwBSRL2_0401.00002210	2162886013	Switchgrass Rhizosphere	MVKMKNDNKQPGDILGVSRAEGPKLPHPPSDGSGARGIEVRGEPERHWGNEDIPQSDGVSGIDMGGAGEGTQVSAEHPRPKVDDDI
JGI10216J12902_1002333852	3300000956	Soil	LPLRYCARHDNKEERDVKYNKKDQNEQPGDVLGISNPGGPKLPHPPSDGSTPVGIDVRGERPRHWGNEDIPQSDGASGIDMGAGGDGPQVAAEHPRPKVEDEV*
JGI10216J12902_1006160962	3300000956	Soil	VKSNKKNKKEQPGDVLGVSNPAGPKLPHPPSDGSTPRGIEVRGEPTRHWGIEDIPQSDGASGIDMGGGGEGTQVRVEQPRAKVEDEG*
JGI10216J12902_1007772953	3300000956	Soil	VKYNKKDKKEQPGDVLGISNPGGPKLPHPPSDGSTPQGIDVRGERPRHWGNEDIPQSDGASGIDMGGGGDGPQVEAEHPRPKVEDEL*
JGI10216J12902_1019463014	3300000956	Soil	VKSNKKQDTEQPGDILGISNPGGPKLPHPPSDGSTPRGIDVRSERERHWGDEDIPQSDGASGIDMGGAGNGPQVASEHPRPKVDESE*
JGI10216J12902_1052711112	3300000956	Soil	VKSTKQNKKEQPGDVLGISNPGGPKLPHPPSDGSTPEGIDVRPERSRHWGTEDIPQSDGAAGVDMGSGGSGPQIASGHSKPGSTEEP*
JGI10216J12902_1240869322	3300000956	Soil	VDYKKNKKEQPGDVLGISNPGGPKLPHPPSDGSTPRGIDVRSERKRHWGNEDIPQSDGATGIDMGGGGSGPQVEAEHPRPKVEDEV*
soilL2_100496605	3300003319	Sugarcane Root And Bulk Soil	VRQNKRNKKEHPGDVLGISKVEGPKLSSPPSDGSTARGIDVRGDRPRHWGNEDIPQSDGAAGIDMGGGGDGPQVRPEHDRPKSALNEED*
Ga0062589_1018548172	3300004156	Soil	MKNDNKQPGDILGVSRAEGPKLPHPPSDGSGARGIEVRGEPERHWGNEDIPQSDGVSGIDMGGAGEGTQVSAEHPRPKVDDDI*
Ga0063356_1001635742	3300004463	Arabidopsis Thaliana Rhizosphere	VANRQDKEDHPGDILGISRAEGPKLPHPPSDGSTPQGIEVRGERPRHWGNEDVPQSDGVSGIDMGGAGEGTQIKGDRRPRTAAEDEDVNLGSFSE*
Ga0063356_1002699923	3300004463	Arabidopsis Thaliana Rhizosphere	VKFTKKAKKEQPGDVLGVSHAGGPQLPHPPSDGSTPSGIEVRGERPRHWGNEDIPQSDGVSGIDMGGAGEGTGIKSDRPHTPAEDEKRNLGGLSE*
Ga0063356_1003470601	3300004463	Arabidopsis Thaliana Rhizosphere	MKFTKKRTKKEQPGDVLGVSRAAGPQLPSPPSDGSTPSGIEVRGERPRHWGNEDIPQSDGVSGIDMGGAGEGTGVKDSRPRTSANDEKRKLGGLSE*
Ga0063356_1041959831	3300004463	Arabidopsis Thaliana Rhizosphere	MKKDNKQPGDILGLSRGEGPKLPHPPSDGSGARGIEVRGEPERHWGNEDIPQSDGASGIDMGGAGEGTQVS
Ga0065712_102060011	3300005290	Miscanthus Rhizosphere	VNHNKSDKNVQPGDILGISNPGGPKLPHPPSDGSTPQGIDVRGERPRHWGNEDIPQSDGAAGIDMGAGGDGTQIAPEPTRPQSEDDR*
Ga0065705_101674182	3300005294	Switchgrass Rhizosphere	MVKMKNDNKQPGDILGVSRAEGPKLPHPPSDGSGARGIEVRGEPERHWGNEDIPQSDGVSGIDMGGAGEGTQVSAEHPRPKVDDDI*
Ga0070677_101122672	3300005333	Miscanthus Rhizosphere	VRDKSKTNKEQPGDVLGISRSGASKLPHPPSDGSVPQGIEVRAERKRHWGNEDIPQSDGATGMDMGGGGTGPQIGSEAED*
Ga0070677_107277121	3300005333	Miscanthus Rhizosphere	VKYNKSDKKEQPGDILGISNPGGPKLPHPPSDGTTPQGIDVRGERPRHWGNEDIPQSDGAADIDMGAGGDGTQIAPELSRPQSEDEL*
Ga0070674_1008702001	3300005356	Miscanthus Rhizosphere	VKYNKSDKKEQPGDILGISNPGGPKLPHPPSDGTTPQGIDVRGERPRHWGNEDIPQSDGAAGIDMGAGGDGTQIAPEHSRPQSEDEL*
Ga0070701_108199022	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MKNDNKQPGDILGVSRAEGPKLPHPPSDGSGARGIEVRGEPERHWGNEDIPQSDGVSGIDMGGAGEGTQVSPEHSRLKVDDV*
Ga0068861_1005859081	3300005719	Switchgrass Rhizosphere	VKMKNDNKQPGDILGVSRAEGPKLPHPPSDGSGARGIEVRGEPERHWGNEDIPQSDGVSGIDMGGAGEGTQVSAEHPRPKVDDDI*
Ga0068870_110893552	3300005840	Miscanthus Rhizosphere	VNHNKSDKNVQPGDILGISNPGGPKLPHPPSDGSTPQGIDVRGERPRHWGNEDIPQSDGATGIDMGAGGDGTQIAPEPTRPQSEDEL*
Ga0068862_1020083122	3300005844	Switchgrass Rhizosphere	SKKRTKKEQPGDVLGISHAGGPQLPHPPSDGTTPSGIEVRGDRPRHWGNEDIPQSDGVSGVDMGGAGEGTGISSDRPRSPAEDEKRNLGGLSE*
Ga0075368_101958781	3300006042	Populus Endosphere	VKNDNQKEQPGDVLGISNPGGPKLPHPPSDGSTPRGIDVRSERKRHWGNEDIPQSDGASGIDMGAGGDGPQIAPE
Ga0075363_1009601201	3300006048	Populus Endosphere	VKNDNQKEQPGDVLGISNPGGPKLPHPPSDGSTPRGIDVRSERKRHWGNEDIPQSDGASGIDMGAGGDGPQIAPEHPRPKVEDEI*
Ga0075422_100315042	3300006196	Populus Rhizosphere	VKYNKTDKKEQPGDILGISNPGGPKLPHPPSDGTTPQGIEVRGERPRHWGNEDIPQSDGASGIDMGGGGDGTQIAPEHPRPTSEDDL*
Ga0075430_1006829413	3300006846	Populus Rhizosphere	VKNNKRNKNDHPGDVLGISKMGGPKLSSPPSDGSTARGIDVRGDRPRHWGNEDIPQSDGAAGIDMGAGGDGPQVRPEHDQPMSALDED*
Ga0079217_100290363	3300006876	Agricultural Soil	VKFTKKNKKDQPGDVLGISNAGGPTLPHPPSDGTTPRGIEVRGEPKRHWGNEDIPQSDGVTGIDMGGSGEGTQVKADRRPRTAAEDEELNLGSHSE*
Ga0079217_116225772	3300006876	Agricultural Soil	KHDKDDKKEQPGDVLGVSNPAGPKLPHPPSDGSTPRGIEVRGEPKRHWGNEDIPQSDGASGVDMGGGGEGTGIESDLPRTGADDEDLNLRGSSE*
Ga0075429_1012451862	3300006880	Populus Rhizosphere	VKNNKRNKNDHPGDVLGISKMGGPKLASPPSDGSTARGIDVRGDRPRHWGNEDIPQSDGAAGIDMGAGGDGPQVRPEHDQPMSALDED*
Ga0068865_1009361252	3300006881	Miscanthus Rhizosphere	MKNDNKQPGDILGVSRAEGPKLPHPPSDGSGARGIEVRGEPERHWGNEDIPQSDGVSGIDMGGAGEGTQVSPEHSRPKVDDV*
Ga0079215_100973262	3300006894	Agricultural Soil	VKYTKKNKKEQPGDVLGVSNTGPGPQLPHPPSDGTTPRGIDVRGERKRHWGNEDIPQSDGASGIDMGGGGEGTQVKAEHPRPKVEDEV*
Ga0079215_104986471	3300006894	Agricultural Soil	TSEQPGDGLGISNPGGPKLPHTPSDGTTPQGIEVRGEPKRHWGNEDIPQSDGASGIDMGGAGEGTGITADRGPRTAAEDEDRDLGGSSE*
Ga0079215_116992721	3300006894	Agricultural Soil	VKFTRKNKAKKEHPGDVLGISNPGGEKLPHPPSDGSTPQGIEVRGERPRHWGTEDIPQSDGASGIDMGAGGEGTHVAAEHPRPKRIKEV*
Ga0079216_103113392	3300006918	Agricultural Soil	VKYTKKNEKEQPGDVLGVSNTGTGPQLPHPPSDGSTPRGIDVRGERKRHWGNEDIPQSDGASGIDMGGGGEGTQVKAEHPRPKVEDEV*
Ga0079216_115782821	3300006918	Agricultural Soil	PGDVLGVSNPAGPKLPHPPSDGTTPRGIEVRGEPKRHWGNEDIPQSDGASGIDMGGGGEGTGLRAEHPRPKVEDEV*
Ga0079218_103683832	3300007004	Agricultural Soil	VSNPAGPKLPHPPSDGTTPRGIEVRGEPKRHWGNEDIPQSDGASGIDMGGGGEGTGLRAEHPRPKVEDEV*
Ga0079218_114023642	3300007004	Agricultural Soil	VKFTKKNKNKKEQPGDVLGVSNPSGPKLPHPPSDGSTPRGIEVRGEPKRHWGIEDIPQSDGASGIDMGGGGEGTQVRAEHPRPKVEDEI*
Ga0105106_106563692	3300009078	Freshwater Sediment	VKSKRNKKAQPGDVLGVSDAAGPKLPHPPSDGSTPRGIEVRPVPERHWGNEDIPQSDGATGIDMGGAGSGPQISSEHPRAKAEDDI*
Ga0105107_100106422	3300009087	Freshwater Sediment	VKSKRTKKAQPGDVLGVSDASGPKLPHPPSDGSTPRGIEVRPVPERHWGNEDIPQSDGATGIDMGGAGSGPQVTSEPPRAKADDDI*
Ga0075418_110289562	3300009100	Populus Rhizosphere	VDVKNNKRNKNDHPGDVLGISKMGGPKLSSPPSDGSTARGIDVRGDRPRHWGNEDIPQSDGAAGIDMGAGGDGPQVRPEHDHPTSALDED*
Ga0114129_104857992	3300009147	Populus Rhizosphere	MFKHGVVHPLRSFERAGFRRSKESDVKSTKRTTKEQPGDVLGVSRAGGPQLPHPPSDGTTPSGIEVRGERPRHWGNEDIPQSDGVAGVDMGGAGEGTGIKSDRPRTPAEDEKRNLGGLSE
Ga0114129_121794522	3300009147	Populus Rhizosphere	VKYNKRDKNEKPGDILGVSNPGGPKLPHPPSDGSTPRGIDVRGERPRHWGNEDIPQSDGASGIDMGGGGDGTQIAPEHPRPTSEDDL*
Ga0111538_133304501	3300009156	Populus Rhizosphere	MKFTKKRTKKEQPGDVLGVSRAAGPQLPSPPSDGSTPSGIEVRGERPRHWGNEDIPQSDGVSGIDMGGAGEGTGVKDSRPRTSADDEKRKLGGLSE*
Ga0105249_100530674	3300009553	Switchgrass Rhizosphere	MKNDNKQPGDILGGSRTKRTKLPHPPSDGSGARGIEVRGEPERHWGNEDIPQSDGVSGIDMGGAGEGTQVSAEHPRPKVDDDI*
Ga0105340_10073052	3300009610	Soil	VEYNKKDKKEQPGDVLGISNPGGPKLPHPPSDGSTPQGIDVRGERPRHWGNEDIPQSDGASGIDMGAGGDGPQVAAEHPRPKSEDEL*
Ga0105340_13337792	3300009610	Soil	VNYNKSDKNEQPGDILGISNPGGPKLPHPPSDGSTPQGIDVRGERPRHWGNEDIPQSDGAAGIDMGAGGDGTQIAPESTRPQSEDEL*
Ga0134122_111389272	3300010400	Terrestrial Soil	VKYNKSDKKEQPGDILGISNPGGPKLPHPPSDGTTPQGIDVRGERPRHWGNEDIPQSDGAAGIDMGAGGDGTQIAPEHSRPQSED
Ga0126317_108795902	3300011332	Soil	VKYNKRDKKEQPGDILGISNPGGPKLPHPPSDGSTPQGIDVRGERPRHWGNEDIPQSDGAAGIDMGAGGDGPQIASEHPRPQSEDDL*
Ga0127502_101734552	3300011333	Soil	MDVKHDKDDKKEQPGDVLGVSNPAGPKLPHPPSDGSTPRGIEVRGEPKRHWGNEDIPQSDGASGVDMGGGGEGTGIESDLPRTGADDEDLNLRGSSE*
Ga0137312_10568332	3300011400	Soil	VKYNKTDKKEQPGDVLGISNPGGPKLPHPPSDGSTPQGIDVRGERPRHWGNEDIPQSDGASGIDMGAGGDGPQVAAEHPRPTSEDEL*
Ga0157299_100500202	3300012899	Soil	RHSEKPKERDVKYNKTDKKEQPGDVRGISNTGGPKLPHPPSDGSTPQGIDVRGERPRHWGNEDIPQSDGATGIDMGAGGEGTQVAAEHPRPKSEDEL*
Ga0157291_104190331	3300012902	Soil	KAKERDVNNNKSDKNEQPGDILGISNPGGPKLPHPPSDGSTPQGIDVRGERPRHWGNEDIPQSDGAAGIDMGAGGDGTQIAPEPTRPQSEDEL*
Ga0157306_102412731	3300012912	Soil	DVLGVSHAGGPQLPHPPSDGSTPSGIEVRGERPRHWGNEDIPQSDGVSGIDMGGAGEGTGIKSDRPHTPAEDEKRNLGGLSE*
Ga0157380_100490574	3300014326	Switchgrass Rhizosphere	VNNNKSDKNEQPGDILGISNPGGPKLPHPPSDGSTPQGIDVRGERPRHWGNEDIPQSDGATGIDMGAGGDGTQIAPEP
Ga0163144_1002470011	3300015360	Freshwater Microbial Mat	VKNENDKKEQPGDVLGISNPAGPKLPHPPSDGSTPQGIEVRGEPKRHWGNEEMPQSDGATGIDMGGGGNGPQIASDRPSPKASEEI*
Ga0132258_101239063	3300015371	Arabidopsis Rhizosphere	VANRKDREDHPGDILGISRAEGPKLPHPPSDGSTPQGIEVRGERPRHWGNEDVPQSDGVSGIDMGGAGEGTQIKGDRRPRTAAEDEDVNLGSFSE*
Ga0132258_118516722	3300015371	Arabidopsis Rhizosphere	VANRQDKEDHPGDILGISRAEGPKLPHPPSDGSTPQGIEVRGERPRHWGNEDVPQSDGVSGIDMGGAGEGTQIKSDRRPRTAAEDEDVNLGSFSE*
Ga0132258_130498841	3300015371	Arabidopsis Rhizosphere	MKNDNKQPGDILGVSRAEGPKLPHPPSDRSGARGIEVRGEPERHWGNEDIPQSDGVSGIDMGGAGEGTQVSAEHPRPKVDDDI*
Ga0132258_133173682	3300015371	Arabidopsis Rhizosphere	MKKDNKQPGDILGVSRAEGPKLPHPPSDGSGARGIEVRGEPERHWGNEDIPQSDGASGIDMGGAGEGTQVSAEHPRPKIDEDI*
Ga0132256_1010423691	3300015372	Arabidopsis Rhizosphere	VANRKDREDHPGDILGISRAEGPKLPHPPSDGSTPQGIEVRGERPRHWGNEDVPQSDGVSGIDMGGAGEGTQIKSDRRPRTAAEDEDVNLGSFSE*
Ga0132257_1006627831	3300015373	Arabidopsis Rhizosphere	RRAVRHCGTPLATVIVWRRIVANRKDREDHPGDILGISRAEGPKLPHPPSDGSTPQGIEVRGERPRHWGNEDVPQSDGVSGIDMGGAGEGTQIKGDRRPRTAAEDEDVNLGSFSE*
Ga0132257_1027506852	3300015373	Arabidopsis Rhizosphere	VKHNNRDKKEQPGDILGISNPGGPKLPHPPSDGTTPQGIEVRGERPRHWGNEDIPQSDGAAGIDMGAGGDGPQIASEHPRPQSEDEL*
Ga0136617_100215885	3300017789	Polar Desert Sand	VKFTKKKNKKEQPGDVLGISNPGGPKLPHPPSDGSTPQGIEVRGERPRHWGTEDIPQSDGASGIDMGGGGEGTHIAPVPPGPKTKKEI
Ga0190266_100850471	3300017965	Soil	VNHNKSDKNEQPGDILGISNPGGPKLPHPPSDGSTPQGIDVRGERPRHWGNEDIPQSDGAAGIDMGAGGDGTQIAPEPTRPQSEDEL
Ga0184634_100828252	3300018031	Groundwater Sediment	VKDNKTDKKEQPGDVLGISNPGGPKLPHPPSDGSIPQGIDVRGERPRHWGNEDIPQSDGASGIDMGAGGDGPQVAAEHPRPKSEDEL
Ga0184624_100497441	3300018073	Groundwater Sediment	NKTDKKEQPGDVLGISNPGGPKLPHPPSDGSIPQGIDVRGERPRHWGNEDIPQSDGASGIDMGAGGDGPQVAAEHPRPKSEDEL
Ga0184624_101212272	3300018073	Groundwater Sediment	VNNNKSDKNEQPGDILGISNPGGPKLPHPPSDGSTPQGIDVRGERPRHWGNEDIPQSDGATGIDMGAGGDGTQIAPEPTRPQSEDEL
Ga0184628_104294552	3300018083	Groundwater Sediment	VKDNKTDKKEQPGDVLGISNPGGPKLPHPPSDGSIPQGIDVRGERPRHWGNEDIPQSDGASGIDMGAGGDGPQVAAE
Ga0190265_102568692	3300018422	Soil	VKFTKNKNEKPGDVLGISNPGGPKLPHPPSDGSTPRGIDVRGERRRHWGTEDIPQSDGATGIDMGGGGEGTQIEAEPSAPKRSDDI
Ga0190272_103042642	3300018429	Soil	VKKDKNTNEQPGDVLGISNPGGPKLPHPPSDGTTPVGIEVRGEPKRHWGNEDIPQSDGASGIDMGGAGEGTGITADRGPRTAAEDEDRDLGGSSE
Ga0190272_108575722	3300018429	Soil	VKNDKEQPGDVLGVSNPAGPKLPHPPSDGSTPRGIDVRPERPRSTGIGDIPQSDGASGIDMGGGGEGTGVRAEHPRPKVDED
Ga0190272_122332392	3300018429	Soil	VKNEKKQPGDVLGVRSLARQKLPHPPSDGSTPRGIDVRSERERHWGIEDIPQSDGASGVDMGGGGEGTEVRAEHPRPKVEDEI
Ga0190272_125372021	3300018429	Soil	VKKDKNKKEHPGDVLGISNPGGPKLAHPPSDGTTPRGIEVRGEPTRHWGNEDIPQSDGASGVDMGGAGEGTGVTAARRPRAPAEDED
Ga0190272_131405801	3300018429	Soil	VKFTKKDKKEQPGDVLGISNPGGPKLPHPPSDGSTPHGIEVRGEPKRHWGTEDIPQSDGATGIDMGAGGDGPQIAAEPDRPKSSDDL
Ga0190275_103660252	3300018432	Soil	VKNDNDKEQPGDVLGVSNPAGPKLPHPPSDGSTPRGIEVRGERPRHWGTEDIPQSDGASGIDMGGAGEGTSIKSDRPRTPATDEERDLDGSTE
Ga0190275_103919702	3300018432	Soil	MNGTSLATGTVEEINVKKDKDEKEQPGDVLGVSNPAGPKLPHPPSDGSTPRGIEVRGEPTRHWGNEDIPQSDGASGIDMGGAGEGTGVKADRRPRTSAEDEDRDLGGSSE
Ga0190270_100182924	3300018469	Soil	VKDNKQDKNEQPGDVLGISNPGGPKLPHPPSDGSTPRGIDVRSERKRHWGTEDIPQSDGASGVDMGGGGSGPQVAAEHPRPKVEDDV
Ga0190270_130083901	3300018469	Soil	VKKNKNKKEQPGDVLGVSNPAGPKLAHPPSDGTTPRGIEVRGEPKRHWGNEDIPQSDGASGIDMGGAGEGTGI
Ga0190274_104821432	3300018476	Soil	VNNNKSDKNEQPGDILGISNPGGPKLPHPPSDGSTPQGIDVRGERPRHWGNEDIPQSDGAAGIDMGAGGDGTQIAPESTRPQSEDEL
Ga0190274_115495832	3300018476	Soil	VKDKQDRKKQPGDVLGVSNPGGPKLPHPPSDGSTPRGIEVRGEPKRHWGNEDIPQSDGASGIDMGGAGEGTGITADRRPRAATEDEEDLSGRSE
Ga0190271_100786783	3300018481	Soil	VKDNKRDKKEQPGDILGISNPGGPKLPHPPSDGSTPQGIDVRGERPRHWGNEDIPQSDGAAGIDMGAGGDGPQIAPEQRRTKSEDEL
Ga0190271_102540343	3300018481	Soil	VNYNKSDKNEQPGDILGISNPGGPKLPHPPSDGSTPQGIDVRGERPRHWGNEDIPQSDGAAGIDMGAGGDGTQIAPEPTRSQSEDEP
Ga0190271_128509862	3300018481	Soil	VNDKNRDRKEQPGDVLGISNPGGPKLPHPPSDGSTPRGIEVRGERPRHWGNEDIPQGDGATGMDMGGGGSGPQIAPEPSRTKTEDED
Ga0173481_107029381	3300019356	Soil	KPKERDVKYNKTDKKEQPGDVLGISNPGGPKLPHPPSDGSTPQGIDVRGERPRHWGNEDIPQSDGASGIDMGAGGDGPQVAAEHPRPKSEDEL
Ga0190264_110791682	3300019377	Soil	VKDNDQDKKEQPGDVLGVSNPAGPKLPHPPSDGSTPRGIEVRGEPKRHWGNEDIPQSDGATGMDMGGGGGGPQIAPEPSRAKTEDEDRDLGGSSE
Ga0190264_117123332	3300019377	Soil	VSNPAGPKLPHPPSDGSTPRGIDVRPERERHWGIEDIPQSDGASGIDMGGGGEGTGVRAEHPRPKVEDEI
Ga0190264_122294762	3300019377	Soil	VLGISNPGGPKLPHPPSDGSTPQGIEVRGEPGRHWGNEDIPQSDGATGIDMGGGGSGPQIAAEQPRPKSSEET
Ga0163153_100989152	3300020186	Freshwater Microbial Mat	VKNENDKKEQPGDVLGISNPAGPKLPHPPSDGSTPQGIEVRGEPKRHWGNEEMPQSDGATGIDMGGGGNGPQIASDRPSPKASEEI
Ga0163150_100200208	3300020195	Freshwater Microbial Mat	VKNENDKKEQPGDVLGISNPAGPKLPHPPSDGSTPQGIEVRGEPKRHWGNEEMPQSDGATGIDMGGGGNGPQIASDRPSPK
Ga0207697_101634972	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	VKYNKSDKKEQPGDILGISNPGGPKLPHPPSDGTTPQGIDVRGERPRHWGNEDIPQSDGAAGIDMGAGGDGTQIAPEHSRPQSEDEL
Ga0207682_101366302	3300025893	Miscanthus Rhizosphere	VRDKSKTNKEQPGDVLGISRSGASKLPHPPSDGSVPQGIEVRAERKRHWGNEDIPQSDGATGMDMGGGGTGPQIGSEAED
Ga0207681_101625082	3300025923	Switchgrass Rhizosphere	MKNDNKQPGDILGVSRAEGPKLPHPPSDGSGARGIEVRGEPERHWGNEDIPQSDGVSGIDMGGAGEGTQVSAEHPRPKVDDDI
Ga0207681_107457771	3300025923	Switchgrass Rhizosphere	VKYNKSDKKEQPGDILGISNPGGPKLPHPPSDGTTPQGIDVRGERPRHWGNEDIPQSDGAAGIDMGAGGDGTQIAPEPTRPQSE
Ga0207701_104711502	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	VKYNKKDKKEQPGDILGISNPGGPKLPHPPSDGTTPQGIDVRGERPRHWGNEDIPQSDGAAGIDMGAGGDGPQIASEHPRPQSEDEL
Ga0207701_111322952	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	VNHNKSDKNVQPGDILGISNPGGPKLPHPPSDGSTPQGIDVRGERPRHWGNEDIPQSDGAAGIDMGAGGDGTQIAPQPTRPQSEDDR
Ga0207706_101593502	3300025933	Corn Rhizosphere	VKMKNDNKQPGDILGVSRAEGPKLPHPPSDGSGARGIEVRGEPERHWGNEDIPQSDGVSGIDMGGAGEGTQVSAEHPRPKVDDDI
Ga0208185_10359942	3300027533	Soil	VEYNKKDKKEQPGDVLGISNPGGPKLPHPPSDGSTPQGIDVRGERPRHWGNEDIPQSDGASGIDMGAGGDGPQVAAEHPRPKSEDEL
Ga0209818_11221272	3300027637	Agricultural Soil	VKFTKKNKKDQPGDVLGISNAGGPTLPHPPSDGTTPRGIEVRGEPKRHWGNEDIPQSDGVTGIDMGGSGEGTQVKADRRPRTAAEDEE
Ga0209387_10515351	3300027639	Agricultural Soil	LGKKERHVKYTKKNKKEQPGDVLGVSNTGPGPQLPHPPSDGTTPRGIDVRGERKRHWGNEDIPQSDGASGIDMGGGGEGTQVKAEHPRPKVEDEV
Ga0209971_10875391	3300027682	Arabidopsis Thaliana Rhizosphere	VKFTKGTKEQPGDVLGVSRAGGPQLPHPPSDGSTPSGIEVRGERPRHWGNEDIPQSDGVSGVDMGGAGEGTGIKSDRPRTPAEDEKRNLGGLSE
Ga0209706_100066856	3300027818	Freshwater Sediment	VKSKRTKKAQPGDVLGVSDASGPKLPHPPSDGSTPRGIEVRPVPERHWGNEDIPQSDGATGIDMGGAGSGPQVTSEPPRAKADDDI
Ga0209813_100709962	3300027866	Populus Endosphere	VKNDNQKEQPGDVLGISNPGGPKLPHPPSDGSTPRGIDVRSERKRHWGNEDIPQSDGASGIDMGAGGDGPQIAPEHPRPKVEDEI
Ga0209974_101878712	3300027876	Arabidopsis Thaliana Rhizosphere	VKFTKGTKEQPGDVLGVSRAGGPQLPHPPSDGSTPSGIEVRGERPRHWGNEDIPQSDGVSGIDMGGAGEGTGIKSDRPHTPAEDEKRNLGGLSE
Ga0209486_100657342	3300027886	Agricultural Soil	VKFTKKNKKDQPGDVLGISNAGGPTLPHPPSDGTTPRGIEVRGEPKRHWGNEDIPQSDGVTGIDMGGSGEGTQVKADRRPRTAAEDEELNLGSHSE
Ga0207428_1000030151	3300027907	Populus Rhizosphere	VKYNKTDKKEQPGDILGISNPGGPKLPHPPSDGTTPQGIEVRGERPRHWGNEDIPQSDGASGIDMGGGGDGTQIAPEHPRPTSEDDL
Ga0209705_101031031	3300027979	Freshwater Sediment	GVSNPAGPKLPHPPSDGSTPRGIEVRGEPQRHWGNEDIPQSDGATGIDMGAGGDGTQVNADRRPRTAAEDEERDLGSFSE
Ga0209705_106252502	3300027979	Freshwater Sediment	VKSKRNKKAQPGDVLGVSDAAGPKLPHPPSDGSTPRGIEVRPVPERHWGNEDIPQSDGATGIDMGGAGSGPQISSEHPRAKAEDDI
Ga0268265_117577252	3300028380	Switchgrass Rhizosphere	GPKEYDVNSKKRTKKEQPGDVLGISHAGGPQLPHPPSDGTTPSGIEVRGDRPRHWGNEDIPQSDGVSGVDMGGAGEGTGISSDRPRSPAEDEKRNLGGLSE
Ga0247827_107618022	3300028889	Soil	VKYNKRDKKEQPGDILGISNPGGPKLPHPPSDGTTPQGIDVRGERPRHWGNEDIPQSDGAAGIDMGAGGDGTQIAPESTRPQSEDEL
Ga0299914_111996292	3300031228	Soil	VKFTKKKKKEQPGDVLGVSNPGGPKLPHPPSDGSTPRGIEVRGEPKRHWGNEDIPQSDGASGVDMGGGGEGTGIKADRPRTAAEDEDRDLGGSSE
Ga0299913_113023441	3300031229	Soil	VLGVSNPDGPKLPHPPSDGSTPRGIEVRGEPKRHWGNEDIPQSDGASGVDMGGAGEGTGIKADRPRTAAEDEDRDLGGSSE
Ga0307405_110002562	3300031731	Rhizosphere	KKERDVKYNKKDEKEQPGDVLGVSNPGGPKLPHPPSDGTTPRGIDVRGERPRHWGNEDIPQSDGASGIDMGAGGDGPQVEAEHPRPKVEDEV
Ga0310904_101505612	3300031854	Soil	VNSKKRTKKEQPGDVLGISHAGGPQLPHPPSDGTTPSGIEVRGDRPRHWGNEDIPQSDGVSGVDMGGAGEGTGISSDRPRSPAEDEKRNLGGLSE
Ga0310904_107590452	3300031854	Soil	MVKMKNDNKQPGDILGVSRAEGPKLPHPPSDGSGARGIEVRGEPERHWGNEDIPQSDGVSGIDMGGAGEGTQ
Ga0310892_104357412	3300031858	Soil	DKSKTNKEQPGDVLGISRSGASKLPHPPSDGSVPQGIEVRAERKRHWGNEDIPQSDGATGMDMGGGGTGPQIGSEAED
Ga0307412_111507321	3300031911	Rhizosphere	VKFTKKRTKKEQPGDVLGVSHAGGPQLPHPPSDGTTPSGIEVRGDRPRHWGNEDIPQSDGVSGIDMGGAGEGTGVKSDRPRTPAEDEKRNLGGLSE
Ga0310884_100255762	3300031944	Soil	MKNDNKQPGDILGVSRAEGPKLPHPPSDGSGARGIEVRSEPERHWGNEDIPQSDGVSGIDMGGAGEGTQVSAEHPRPKVDDDI
Ga0310884_106767252	3300031944	Soil	VKSKKRTKKEQPGDVLGISHAGGPQLPHPPSDGTTPSGIEVRGDRPRHWGNEDIPQSDGVSGVDMGGAGEGTGISSDRPRSPAEDEKRNLGGLSE
Ga0310906_109521401	3300032013	Soil	NKSDKNEQPGDILGISNPGGPKLPHPPSDGSTPQGIDVRGERPRHWGNEDIPQSDGAAGIDMGAGGDGTQIAPESTRPQSEDEL
Ga0310890_105435181	3300032075	Soil	VNSKKRTKKEQPGDVLGISHAGGPQLPHPPSDGTTPSGIEVRGDRPRHWGNEDIPQSDGVSGVDMGGAGEGTGI
Ga0315910_114956191	3300032144	Soil	VKHDNSDKKEQPGDVLGVSNPAGPKLPHPPSDGSTPRGIEVRGEPTRHWGNEDIPQSDGASGIDMGGGGEGTGIASDSRPRSGADDEDLNLSSSSE
Ga0364945_0218443_2_229	3300034115	Sediment	GDVLGISNPGGPKLPHPPSDGSTPQGIDVRGERPRHWGNEDIPQSDGASGIDMGAGGDGPQVAAEHPRPKSEDEL
Ga0370490_0011505_2447_2776	3300034128	Untreated Peat Soil	MLSNNKETAVKFNKNDKDANETEQPGDVLGVSRAGGPQLPHPPSDGSTPAGIEVRGERKRHWGIEDIPQSDGASGIDMGGGGEGTGIAADSSPRTAAEDEERDLGGVTK
Ga0364927_0019727_2_256	3300034148	Sediment	NKKDKKEQPGDVLGISNPGGPKLPHPPSDGSTPQGIDVRGERPRHWGNEDIPQSDGASGIDMGAGGDGPQVAAEHPRPKSEDEL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069030

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences