NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F069017

Metagenome / Metatranscriptome Family F069017

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F069017
Family Type Metagenome / Metatranscriptome
Number of Sequences 124
Average Sequence Length 61 residues
Representative Sequence LPGKLDDVGRQPLLVVAALRRLALCRAVLAERRTGATLGDAKLTTNMLDAGTATRRAQ
Number of Associated Samples 114
Number of Associated Scaffolds 124

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 66.94 %
% of genes from short scaffolds (< 2000 bps) 99.19 %
Associated GOLD sequencing projects 106
AlphaFold2 3D model prediction Yes
3D model pTM-score0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (66.129 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(9.677 % of family members)
Environment Ontology (ENVO) Unclassified
(30.645 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(34.677 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 62.79%    β-sheet: 0.00%    Coil/Unstructured: 37.21%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.41
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 124 Family Scaffolds
PF01527HTH_Tnp_1 75.00
PF13276HTH_21 6.45
PF13683rve_3 6.45
PF00665rve 3.23
PF01548DEDD_Tnp_IS110 0.81
PF01609DDE_Tnp_1 0.81
PF02371Transposase_20 0.81
PF00753Lactamase_B 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 124 Family Scaffolds
COG2801Transposase InsO and inactivated derivativesMobilome: prophages, transposons [X] 3.23
COG2826Transposase and inactivated derivatives, IS30 familyMobilome: prophages, transposons [X] 3.23
COG3316Transposase (or an inactivated derivative), DDE domainMobilome: prophages, transposons [X] 3.23
COG4584TransposaseMobilome: prophages, transposons [X] 3.23
COG3547TransposaseMobilome: prophages, transposons [X] 1.61
COG3039Transposase and inactivated derivatives, IS5 familyMobilome: prophages, transposons [X] 0.81
COG3293TransposaseMobilome: prophages, transposons [X] 0.81
COG3385IS4 transposase InsGMobilome: prophages, transposons [X] 0.81
COG5421TransposaseMobilome: prophages, transposons [X] 0.81
COG5433Predicted transposase YbfD/YdcC associated with H repeatsMobilome: prophages, transposons [X] 0.81
COG5659SRSO17 transposaseMobilome: prophages, transposons [X] 0.81


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms66.13 %
UnclassifiedrootN/A33.87 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000858|JGI10213J12805_10779543All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales517Open in IMG/M
3300000890|JGI11643J12802_10123223All Organisms → cellular organisms → Bacteria687Open in IMG/M
3300000956|JGI10216J12902_103548586All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales879Open in IMG/M
3300001661|JGI12053J15887_10276445All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria827Open in IMG/M
3300002568|C688J35102_117906363All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales514Open in IMG/M
3300004156|Ga0062589_101975473All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales591Open in IMG/M
3300004156|Ga0062589_102169386All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales568Open in IMG/M
3300004463|Ga0063356_104859124All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria578Open in IMG/M
3300004479|Ga0062595_102303203All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria531Open in IMG/M
3300005176|Ga0066679_11033595All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales510Open in IMG/M
3300005343|Ga0070687_100874116All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales642Open in IMG/M
3300005353|Ga0070669_101139172All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales673Open in IMG/M
3300005441|Ga0070700_101026206All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales679Open in IMG/M
3300005444|Ga0070694_101882563Not Available510Open in IMG/M
3300005544|Ga0070686_101902896All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria508Open in IMG/M
3300005713|Ga0066905_100945944All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales757Open in IMG/M
3300005713|Ga0066905_101107139All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales704Open in IMG/M
3300005719|Ga0068861_100562800All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1041Open in IMG/M
3300005719|Ga0068861_100996514All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales799Open in IMG/M
3300005844|Ga0068862_100472577All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1185Open in IMG/M
3300006038|Ga0075365_10081354All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2194Open in IMG/M
3300006047|Ga0075024_100884975All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria507Open in IMG/M
3300006196|Ga0075422_10283977All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales705Open in IMG/M
3300006578|Ga0074059_12111112All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria530Open in IMG/M
3300006800|Ga0066660_11023459All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales661Open in IMG/M
3300006844|Ga0075428_100487241All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1320Open in IMG/M
3300006845|Ga0075421_102402194Not Available551Open in IMG/M
3300006847|Ga0075431_102047095All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales527Open in IMG/M
3300006880|Ga0075429_100539167All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1022Open in IMG/M
3300006894|Ga0079215_10871187All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae641Open in IMG/M
3300007004|Ga0079218_13140158All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria558Open in IMG/M
3300009092|Ga0105250_10596318Not Available511Open in IMG/M
3300009100|Ga0075418_12360664Not Available580Open in IMG/M
3300009100|Ga0075418_13055934Not Available510Open in IMG/M
3300009146|Ga0105091_10385699Not Available696Open in IMG/M
3300009147|Ga0114129_10341423Not Available1986Open in IMG/M
3300009148|Ga0105243_10838119All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria909Open in IMG/M
3300009156|Ga0111538_13890833All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales516Open in IMG/M
3300009157|Ga0105092_10090450Not Available1672Open in IMG/M
3300009157|Ga0105092_10093889All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1640Open in IMG/M
3300009553|Ga0105249_12789021All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria560Open in IMG/M
3300009553|Ga0105249_12984444All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales543Open in IMG/M
3300009609|Ga0105347_1054328All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1444Open in IMG/M
3300009805|Ga0105079_1000409All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1886Open in IMG/M
3300009810|Ga0105088_1097254Not Available542Open in IMG/M
3300009818|Ga0105072_1121209All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales536Open in IMG/M
3300009820|Ga0105085_1086762Not Available600Open in IMG/M
3300009821|Ga0105064_1066034Not Available711Open in IMG/M
3300009823|Ga0105078_1041963Not Available588Open in IMG/M
3300009837|Ga0105058_1074161Not Available780Open in IMG/M
3300010358|Ga0126370_11372914Not Available666Open in IMG/M
3300010359|Ga0126376_12393607Not Available575Open in IMG/M
3300010360|Ga0126372_12478254Not Available570Open in IMG/M
3300010366|Ga0126379_12367696Not Available631Open in IMG/M
3300010371|Ga0134125_11625351All Organisms → cellular organisms → Bacteria703Open in IMG/M
3300010400|Ga0134122_12453797All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales570Open in IMG/M
3300011412|Ga0137424_1063163Not Available705Open in IMG/M
3300011444|Ga0137463_1306951All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales579Open in IMG/M
3300012159|Ga0137344_1090322Not Available566Open in IMG/M
3300012188|Ga0136618_10205693All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria855Open in IMG/M
3300012232|Ga0137435_1186784All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria637Open in IMG/M
3300012678|Ga0136615_10459110All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales549Open in IMG/M
3300012884|Ga0157300_1089566All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales551Open in IMG/M
3300012899|Ga0157299_10247959All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria563Open in IMG/M
3300012904|Ga0157282_10206483All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales638Open in IMG/M
3300012912|Ga0157306_10087268All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales876Open in IMG/M
3300012985|Ga0164308_11661462Not Available591Open in IMG/M
3300013297|Ga0157378_11753007All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales669Open in IMG/M
3300014157|Ga0134078_10590991Not Available530Open in IMG/M
3300014326|Ga0157380_10236140All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1645Open in IMG/M
3300014326|Ga0157380_13518328All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales502Open in IMG/M
3300014876|Ga0180064_1143305Not Available508Open in IMG/M
3300015160|Ga0167642_1042298All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales713Open in IMG/M
3300015164|Ga0167652_1070662All Organisms → cellular organisms → Bacteria611Open in IMG/M
3300015195|Ga0167658_1036848All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium1259Open in IMG/M
3300015195|Ga0167658_1053696All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria981Open in IMG/M
3300015373|Ga0132257_101641353All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales823Open in IMG/M
3300017792|Ga0163161_11570589All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales579Open in IMG/M
3300018072|Ga0184635_10396493All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales523Open in IMG/M
3300018429|Ga0190272_12228952All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria588Open in IMG/M
3300018466|Ga0190268_11820963Not Available550Open in IMG/M
3300018468|Ga0066662_12603687Not Available534Open in IMG/M
3300018481|Ga0190271_10515105All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1309Open in IMG/M
3300018920|Ga0190273_10089280All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1691Open in IMG/M
3300019356|Ga0173481_10048528All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1451Open in IMG/M
3300021081|Ga0210379_10514954Not Available532Open in IMG/M
3300021082|Ga0210380_10073075All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1499Open in IMG/M
3300023057|Ga0247797_1016321Not Available929Open in IMG/M
3300025327|Ga0209751_11351791Not Available507Open in IMG/M
3300025915|Ga0207693_11085641All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales608Open in IMG/M
3300025920|Ga0207649_10484898All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria938Open in IMG/M
3300025923|Ga0207681_11161719Not Available648Open in IMG/M
3300025923|Ga0207681_11648527All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria536Open in IMG/M
3300025933|Ga0207706_11498713Not Available550Open in IMG/M
3300025944|Ga0207661_11676181Not Available581Open in IMG/M
3300025961|Ga0207712_11133403All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales697Open in IMG/M
3300025972|Ga0207668_12153189All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingobium → unclassified Sphingobium → Sphingobium sp. YR768502Open in IMG/M
3300025986|Ga0207658_12102196All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales513Open in IMG/M
3300026088|Ga0207641_12568344Not Available507Open in IMG/M
3300026127|Ga0209956_1084829Not Available613Open in IMG/M
3300027032|Ga0209877_1030143Not Available542Open in IMG/M
3300027513|Ga0208685_1025796Not Available1311Open in IMG/M
3300027577|Ga0209874_1130095Not Available581Open in IMG/M
3300027663|Ga0208990_1081880All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales917Open in IMG/M
3300027674|Ga0209118_1054297All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1178Open in IMG/M
3300027722|Ga0209819_10075019All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1173Open in IMG/M
3300027915|Ga0209069_10753459Not Available577Open in IMG/M
(restricted) 3300028043|Ga0233417_10136645All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1052Open in IMG/M
3300028381|Ga0268264_12468847Not Available525Open in IMG/M
3300028590|Ga0247823_11408301All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria522Open in IMG/M
3300028784|Ga0307282_10553249Not Available559Open in IMG/M
3300028824|Ga0307310_10393056All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales687Open in IMG/M
3300031474|Ga0170818_111023244All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria560Open in IMG/M
3300031538|Ga0310888_10951721Not Available538Open in IMG/M
3300031740|Ga0307468_100276377All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1201Open in IMG/M
3300031740|Ga0307468_100659005All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales867Open in IMG/M
3300031908|Ga0310900_11076345All Organisms → cellular organisms → Bacteria → Proteobacteria664Open in IMG/M
3300032179|Ga0310889_10200486All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales922Open in IMG/M
3300032180|Ga0307471_104078661Not Available516Open in IMG/M
3300032205|Ga0307472_100167738All Organisms → cellular organisms → Bacteria1627Open in IMG/M
3300034090|Ga0326723_0438773Not Available596Open in IMG/M
3300034148|Ga0364927_0059861All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1009Open in IMG/M
3300034173|Ga0334925_137464Not Available530Open in IMG/M
3300034692|Ga0373917_0003252All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1658Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil9.68%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand7.26%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere7.26%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil5.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil4.03%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere4.03%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere4.03%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment3.23%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.23%
Glacier Forefield SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil3.23%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.23%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.23%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere3.23%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil2.42%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil2.42%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere2.42%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment1.61%
Polar Desert SandEnvironmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand1.61%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.61%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.61%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.61%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.61%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.61%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.61%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.61%
SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Sediment0.81%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.81%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.81%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.81%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.81%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.81%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.81%
Hypolithic BiocrustEnvironmental → Terrestrial → Soil → Soil Crust → Unclassified → Hypolithic Biocrust0.81%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.81%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment0.81%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.81%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.81%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.81%
Sediment SlurryEngineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry0.81%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000858Soil microbial communities from Great Prairies - Wisconsin Native Prairie soilEnvironmentalOpen in IMG/M
3300000890Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001661Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)EnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004463Combined assembly of Arabidopsis thaliana microbial communitiesHost-AssociatedOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005176Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128EnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005544Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaGEnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006038Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5Host-AssociatedOpen in IMG/M
3300006047Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013EnvironmentalOpen in IMG/M
3300006196Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1Host-AssociatedOpen in IMG/M
3300006578Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMA (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006847Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009092Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaGHost-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009146Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015EnvironmentalOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009157Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015EnvironmentalOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009609Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890EnvironmentalOpen in IMG/M
3300009805Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_0_10EnvironmentalOpen in IMG/M
3300009810Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30EnvironmentalOpen in IMG/M
3300009818Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40EnvironmentalOpen in IMG/M
3300009820Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60EnvironmentalOpen in IMG/M
3300009821Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30EnvironmentalOpen in IMG/M
3300009823Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50EnvironmentalOpen in IMG/M
3300009837Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300011412Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT620_2EnvironmentalOpen in IMG/M
3300011444Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2EnvironmentalOpen in IMG/M
3300012159Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT500_2EnvironmentalOpen in IMG/M
3300012188Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ330 (21.06)EnvironmentalOpen in IMG/M
3300012232Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT100_2EnvironmentalOpen in IMG/M
3300012678Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ288 (22.06)EnvironmentalOpen in IMG/M
3300012884Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2EnvironmentalOpen in IMG/M
3300012899Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S058-202B-2EnvironmentalOpen in IMG/M
3300012904Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1EnvironmentalOpen in IMG/M
3300012912Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2EnvironmentalOpen in IMG/M
3300012985Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300014876Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT200_16_10DEnvironmentalOpen in IMG/M
3300015160Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G7C, Adjacent to main proglacial river, mid transect (Watson river))EnvironmentalOpen in IMG/M
3300015164Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-4b, rock/ice/stream interface)EnvironmentalOpen in IMG/M
3300015195Arctic soil microbial communities from a glacier forefield, Storglaci?ren, Tarfala, Sweden (Sample st-6c, vegetation/snow interface)EnvironmentalOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300018072Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2EnvironmentalOpen in IMG/M
3300018429Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 TEnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300018920Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 ISEnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300021081Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redoEnvironmentalOpen in IMG/M
3300021082Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redoEnvironmentalOpen in IMG/M
3300023057Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S136-409B-6EnvironmentalOpen in IMG/M
3300025327Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026127Soil microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2A_C_D1_MG (SPAdes)EnvironmentalOpen in IMG/M
3300027032Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_0_30 (SPAdes)EnvironmentalOpen in IMG/M
3300027513Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT890 (SPAdes)EnvironmentalOpen in IMG/M
3300027577Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)EnvironmentalOpen in IMG/M
3300027663Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027674Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027722Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027915Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300028043 (restricted)Sediment microbial communities from Lake Towuti, South Sulawesi, Indonesia - Sediment_Towuti_2014_0.5_MGEnvironmentalOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028590Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30EnvironmentalOpen in IMG/M
3300028784Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121EnvironmentalOpen in IMG/M
3300028824Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197EnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300032179Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300034090Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00NEnvironmentalOpen in IMG/M
3300034148Sediment microbial communities from East River floodplain, Colorado, United States - 18_j17EnvironmentalOpen in IMG/M
3300034173Biocrust microbial communities from Mojave Desert, California, United States - 21HNCEnvironmentalOpen in IMG/M
3300034692Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A1A0.3EngineeredOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI10213J12805_1077954313300000858SoilLSSKLDDVGRQPLLVLAALRRLALRRAVLTERRTGATLGNANNTTNMLDTGAPARRAQ*
JGI11643J12802_1012322313300000890SoilAGELDDVGRQPLLVVAALRHLALRRAMLPERRTGATLGNAKNTTNMLDTRAPTRRAQ*
JGI10216J12902_10354858613300000956SoilKLDDVGRQPLLVVAALQRPALRRAMLAERRTGATLGDAKFTANMLDAGTATRRAQ*
JGI12053J15887_1027644533300001661Forest SoilLPGKLDDVGCQPLLVVAALRRLALCRAVLAERRTGATLGDAKLTTNMLDAGTATRRAQ*
C688J35102_11790636323300002568SoilPGQLDGVGRQPLFIVAAVWDLALRRAMLAKRRTGAALGNGQLPSNMLNAGAATRGA*
Ga0062589_10197547323300004156SoilVAIAAVLPGKLDDVGRQPLLILAALRHLALCRAVLAERRAGATLGDAKLTANMLDTGAATRRAQ*
Ga0062589_10216938623300004156SoilMSGELDDVGRQPFLVVTALRRPALRRAVLAERRTGATLGDAKLTTNMLDARATTRRAQ*
Ga0063356_10485912423300004463Arabidopsis Thaliana RhizosphereLPGKLDDVGRQPLLVVAALRRLALRRAVLTERRTGATLGDAKNTTNMLDTGAPARRAQ*
Ga0062595_10230320313300004479SoilDLAIAIAAILAGQLHRVGHQPLFVFTALRDLTLRRAMLAERRAGAALGDAQLPSNMLDAGAATRGA*
Ga0066679_1103359513300005176SoilILPGKLDDVGRQPLLVVAALRHLALRRAMLAERRTGATLGDAKGTTNMLDAGTSTRRAQ*
Ga0070687_10087411613300005343Switchgrass RhizosphereQSRDLSIAIAAVLSGKLDDVGRQPLLVIAALRHLALRRAVLAERRTGATLGDAKLTTNMLNAGAATRRAQ*
Ga0070669_10113917213300005353Switchgrass RhizosphereKLDDVGRQPLLVIAALRHLALCRAVLSERRTGATLGDAKHTTNMLDAGTPTRRAQ*
Ga0070700_10102620613300005441Corn, Switchgrass And Miscanthus RhizosphereVAQQSRDLSIAIAAVLSGKLDDVGRQPLLVIAALRHLALRRAVLAERRTGATLGDAKLTTNMLNAGAATRRAQ*
Ga0070694_10188256313300005444Corn, Switchgrass And Miscanthus RhizosphereAQQSRDLSIAIAAVLSGKLDDVGRQPLLVIAALRHLALRRAVLAERRTGATLGDAKLTTNMLNAGAATRRAQ*
Ga0070686_10190289623300005544Switchgrass RhizosphereQLDSVGCQLLFIVAALRDLALRRAMLAERRTGTTLGNGQLASNMLDAGAATRGA*
Ga0066905_10094594423300005713Tropical Forest SoilLSGELDDVGRQPLLLVAALRRLALRRTMLPERRTRATLGDANNTANMLDTGTPTRRAQ*
Ga0066905_10110713923300005713Tropical Forest SoilLSGKLDDVGRQPLLVVAALRRLALRRAMLAERRTGATLGDAKNTANMLDTGAPARRAQ*
Ga0068861_10056280013300005719Switchgrass RhizosphereDVGRQPLLVIAALRHLALCRAVLAERRTGATLGDAKGTTNMLDAGTSTRRAQ*
Ga0068861_10099651413300005719Switchgrass RhizosphereVAQQSRDLSIAIAAVLSGKLDDVGRQPLLVIAALRHLALCRAVLSERRTGATLGDAKHTTNMLDAGTPTRRAQ*
Ga0068862_10047257723300005844Switchgrass RhizosphereLSGKLDDVGRQPLLVIAALRHLALRRAVLAERRTGATLGDAKLTTNMLNAGAATRRAQ*
Ga0075365_1008135423300006038Populus EndosphereLPGKLDDVGGQPLLVVAALRRLALRRAVLTKRRTGATLGDAKNATNLLDTGAPARRA*
Ga0075024_10088497513300006047WatershedsPGKLDDVGRQPLLVVAALRHLALRRAMLAERRTGATLGDAKFTTNMLDAGTPTRRAQ*
Ga0075422_1028397713300006196Populus RhizosphereLDDVGRQPLLVVAALRHLALCRAVLAERRTGATLGDAKHTTNMLDAGTPTRRAQ*
Ga0074059_1211111213300006578SoilVAVAAILPGKLDDIGRQPLLVIAALRYLALRRAVLAERRASATLGYAKFSANMLDAGTATRRAQ*
Ga0066660_1102345933300006800SoilGKLDDVGRQPFLVVAALRCLALRRAVLAERRTGATLGNAKLTTNMLDTGTATRRAQ*
Ga0075428_10048724143300006844Populus RhizosphereLPGKLDDVGRQPVFVVAALRRLALRRAMLAERRTGATLGYAKITANMLDTGSATRRAQ*
Ga0075421_10240219413300006845Populus RhizosphereGVAQQSRDLSIAIAAVLSGKLDDVGRQPLLVIAALRHLALRRAVLAERRTGATLGDAKLMTNMLNAGAATRRAQ*
Ga0075431_10204709533300006847Populus RhizosphereIAIAAVLSGKLDDVGRQPLLVVAALRHLALCRAVLAERRTGATLGDAKHTTNMLDAGTPTRRAQ*
Ga0075429_10053916723300006880Populus RhizosphereLPGELDDVGRQPLFVVAALRRLALCRAMLAERRTGATLGYAKITANMLDTGSATRRAQ*
Ga0079215_1087118723300006894Agricultural SoilLPGQLDEVGGQPLFIVTAVRDLTLRRAMLAERRTGAPLGDAQLPSNMLDAGAATRGA*
Ga0079218_1314015813300007004Agricultural SoilTAIVPGQLDEVSRQALFIVAAVWDLALRRAMLAERRAGTALGDGELPSNMLNAGAATRGA
Ga0105250_1059631813300009092Switchgrass RhizosphereAGIPQQSRDLPVAIAAVLPGKLDDVGRQPLLILAALRHLALCRAVLAERRAGATLGDAKLTANMLDTGAATRRAQ*
Ga0075418_1236066433300009100Populus RhizosphereSGKLDDVGRQPLLVVAALRRPALRRAMLAERRTRATLGDAKLNANMLDAGTATRRA*
Ga0075418_1305593413300009100Populus RhizosphereLPGKLDDVGRQPILVIAALRHLALRRAVLAERRAGATLGDAKLTTNML
Ga0105091_1038569923300009146Freshwater SedimentAVAAVLPGKLDDVGRQPLFVVAALRRLALRRAMLAERRTGATLGYAKITANMLDTGSATRRAQ*
Ga0114129_1034142333300009147Populus RhizosphereLSGKLDDVGRQPLLVVAALRHLALCRAVLAERRTGATLGDAKHTTNMLDAGTPTRRAQ*
Ga0105243_1083811913300009148Miscanthus RhizosphereAQQSRDLSIAIAAVLSGKLDDVGRQPLLVIAALRHLALCRAVLSERRTGATLGDAKHTTNMLDAGTPTRRAQ*
Ga0111538_1389083323300009156Populus RhizosphereVHKPAGVAQQSRDLSIAIAAVLSGKLDDVGRQPLLVIAALRHLALRRAVLAERRTGATLGDAKLTTNMLNAGAATRRAQ*
Ga0105092_1009045023300009157Freshwater SedimentLPGKLDDVGRQPLFVIAALRYLALRRAMLAERRTGATLGYAKITANMLDTGSATRRAQ*
Ga0105092_1009388923300009157Freshwater SedimentLPGKLDDIGRQPLLVVAALRRLALCRAVLAERRTGATLGNAKLTTNMLDAGTATRRA*
Ga0105249_1278902123300009553Switchgrass RhizosphereAGVAQQSRDLSIAIAAVLSGKLDDVGRQPLLVIAALRHLALCRAVLSERRTGATLGDAKHTTNMLDAGTPTRRAQ*
Ga0105249_1298444423300009553Switchgrass RhizosphereAGVAQQSRDLSIAIAAVLSGKLDDVGRQPLLVIAALRHLALRRAVLAERRTGATLGDAKLTTNMLNAGAATRRAQ*
Ga0105347_105432823300009609SoilLPGKLDDVGRQPLFVVAALRRLALRRAMLAERRTGATLGYAKITANMLDTGSATRRAQ*
Ga0105079_100040953300009805Groundwater SandPGEIDDVGRQLLLVIAALRHLALRRAMLAERRAGATLGDAKLTANMLDTGAATRRAQ*
Ga0105088_109725413300009810Groundwater SandGVVQQSRDLSIAIAAVLSGKLDDVGRQPLLVVAALRHLALCRAVLSERRTGATLGDAKHTTNMLDAGTPTRRAQ*
Ga0105072_112120923300009818Groundwater SandGKLDDVGRQPILVVTALRHLALRRAMLAERRTGATLGDAKLTTNMLDAGTATRRAQ*
Ga0105085_108676223300009820Groundwater SandGRQPLLILAALRHLALCRAVLAERRAGATLGDAKLTANMLDTGAATRRAQ*
Ga0105064_106603433300009821Groundwater SandGTFSPSRRQIRSTRVDQPASVPQQGRDLPVAIAAVLPGKLDDVGRQPLLILAALRHLALCRAVLAERRAGATLGDAKLTANMLDTGAATRRAQ*
Ga0105078_104196323300009823Groundwater SandTAVLSGELDDVGRQPLLVVAALRRLTLRRAVLPERHTRAALGDAKLTTNMLNAGAATRRAQ*
Ga0105058_107416123300009837Groundwater SandGRQPLLVVAALRHLALCRAVLSERRTGATLGDAKHTTNMLDAGTPTRRAQ*
Ga0126370_1137291423300010358Tropical Forest SoilGGCQPLLVVAALRRLALCRAVLAERRTGATLGDAKLTTNMLDAGTATRRAQ*
Ga0126376_1239360723300010359Tropical Forest SoilDDVGRQPLLVVAALRRLALRRTVLAERRTGATPGDAKTTANMIDAGAATRRAQ*
Ga0126372_1247825423300010360Tropical Forest SoilLSGKLDDVGRQPLLVVAALRRLALRRTVLAERRTGSTLGDAKTTANMIDAGAATRRAQ*
Ga0126379_1236769623300010366Tropical Forest SoilLSGKLDDVGRQLLLVVAALRRLALRRAMLTERRTGATLGDAKNITNMLDAGTPTRRAQ*
Ga0134125_1162535113300010371Terrestrial SoilSRYLSIAIAAVLSSKLDDVGRQPLLVIAALRHLALRRAVAERRTGATLGDAKLTTNMLNAGAATRRAQ*
Ga0134122_1245379713300010400Terrestrial SoilAIAAVLSGKLDDVGRQPLLVIAALRHLALRRAVLAERRTGATLGDAKLTTNMLNAGAATRRAQ*
Ga0137424_106316323300011412SoilAQQSRDLSIAIAAVLSGKLDDVGRQPLFVVAALRHLALCRAVLSERRTGATLGDAKHTTNMLDAGTPTRRAQ*
Ga0137463_130695133300011444SoilDVGRQPLLVVAALRHLALRRAVLAERHAGATLGNAKLTTNMLDTGTATRRAQ*
Ga0137344_109032223300012159SoilLSGKLDDVGRQPLFVVAALRHLALCRAVLSERRTGATLGDAKHTTNMLDTGAATRRAQ*
Ga0136618_1020569333300012188Polar Desert SandPGQLDDGGGQPLFIVTALRDLTLCRAMLAERRTGAALGDGQLPSNMLDAGAATRGAQ*
Ga0137435_118678423300012232SoilLSGKLDGVGRQTLLVIAALRYLALRRAVLAERRTGATLGDAKLTTNMLDAGTPTRRAQ*
Ga0136615_1045911023300012678Polar Desert SandLPHQLDEIGCQPLFIITALRDLTLRRTMLAERRTGAALGDGQLPSNMLDAGAATRGA*
Ga0157300_108956623300012884SoilAVLSGKLDDVGRQPLLVIAALRHLALRRAVLAERRTGATLGDAKLTTNMLNAGAATRRAQ
Ga0157299_1024795923300012899SoilPLLVVTALRRPALRRAVLAERRTGATLGDAKLTTNMLDARATTRRAQ*
Ga0157282_1020648323300012904SoilTRVGGWRCNDGVAQQSRDLSIAIAAVLSGKLDDVGRQPLLVIAALRHLALCRAVLSERRTGATLGDAKLTTNMLNAGAATRRAQ*
Ga0157306_1008726823300012912SoilKLDDVGRQPLLVIAALRHLALRRAVLAERRTGATLGDAKLTTNMLDAGAATRRAQ*
Ga0164308_1166146213300012985SoilQPLLVVAALRHLALCRAVLSERRTGATLGDAKHTTNMLDAGTPTRRAQ*
Ga0157378_1175300713300013297Miscanthus RhizospherePAGGAQQRRDLAVAVAAILSGKLDDVGSQPLLVVAALRRLVLRRAMLAERRTGATLGDAKLTTNMLDAGTPTRRAQ*
Ga0134078_1059099123300014157Grasslands SoilFAVAIAAILPGKLDDVGRQPLLVIAALRHLALCRAMLAERRTGATLGDAKLTTNMLDTGTPTRRAQ*
Ga0157380_1023614043300014326Switchgrass RhizosphereAVLSGKLDDVGRQPLLVIAALRHLALCRAVLSERRTGATLGDAKHTTNMLDAGTPTRRAQ
Ga0157380_1351832813300014326Switchgrass RhizosphereGKLDDVGRQPLLVIAALRHLALCRAVLAERRTGATLGDAKLTTNMLNAGAATRRAQ*
Ga0180064_114330513300014876SoilRKFDQIGHQAVFVFPAPRQLALCRAILAERRTGATLGDAKHTTNMLDAGAATRRAQ*
Ga0167642_104229823300015160Glacier Forefield SoilLPGKLDDVGRQPLLVVAALRRLALCRAMQAERRTGATLGDAKLTTNMLDAGTATRRAQ*
Ga0167652_107066213300015164Glacier Forefield SoilLPGKLDDVGRQPLLVVAALRRLALCRAVLAERRTGATLGDAKFTTNMLDAGTPTRRAQ*
Ga0167658_103684823300015195Glacier Forefield SoilLPGKLDDVGRQPLLVVAALRRLALCRAVLAERRTGATLGDAKLTTDMLDAGTATRRAQ*
Ga0167658_105369623300015195Glacier Forefield SoilLSSELDDVGRQPLLVVAALRCLALCRAMLAERRTGATLGDAKFTTNMLDTGTATRRAQ*
Ga0132257_10164135313300015373Arabidopsis RhizosphereDPLHSLVVDQPARVTQQSCDLSVTVAAILSGKLDDVGRQPLLVVAALRHLALRRAMLAERRTGATLGNAKLTTNMLDAGTPTRRAQ*
Ga0163161_1157058913300017792Switchgrass RhizosphereVAQQSRDLSIAIAAVLSGKLDDVGRQPLLVIAALRHLALRRAVLAERRTGATLGDAKLTTNMLNAGAATRRAQ
Ga0184635_1039649323300018072Groundwater SedimentRDLSIAIAAVLSGKLDDVGRQPLLVIAALRHLALRRAVLAERRTGATLGDAKLTTNMLNAGAATRRAQ
Ga0190272_1222895223300018429SoilGQLDGVGRQPLFVLTALRNLTLRRAMLAERRTGAALGDGELPSNMLNAGAATRGA
Ga0190268_1182096323300018466SoilLPGKLDDVGRQPLFVVAALRCLALRRAMLAERRTGATLGYAKITANMLDTGSATRRAQ
Ga0066662_1260368713300018468Grasslands SoilKLDDVGRQPLLVVAALRHLALRRAMLAERRTGATLGDAKFTTNMLDAGTPTRRAQ
Ga0190271_1051510523300018481SoilLPGKLDDVGRQPLFVVAALRRLALRRAMLAERRTGATLGYAKITANMLDTGSATRRAQ
Ga0190273_1008928033300018920SoilAAILPGELYDISRQPRFIITALRDLALRRAMLAERRTGTALRDGQLPSNMLDAGAAARGA
Ga0173481_1004852823300019356SoilLSGKLDDVGRQPLLVIAALRHLALRRAVLAERRTGATLGDAKLTTNMLNAGAATRRAQ
Ga0210379_1051495413300021081Groundwater SedimentLSIAIAAVLSGKLDDVGRQPLLVVAALRHLALCRAVLSERRTGATLGDAKHTTNMLGAGTPTRRAQ
Ga0210380_1007307523300021082Groundwater SedimentLPGKLDDVGRQPLLVVAALRRLALCRAVLAERRTGATLGDAKLTTDMLDAGTATRRAQ
Ga0247797_101632113300023057SoilLPGELDDVGRQPLFVVAALRRLALCRAMLAERRTGATLGYAKITAYMLDTGSATRRAQ
Ga0209751_1135179123300025327SoilVGSQPLVVVAALWNLALRRAVLPERRTGTALGYVKFAANMLDAGTAVCGA
Ga0207693_1108564123300025915Corn, Switchgrass And Miscanthus RhizosphereLPGKLDDVGRQPLLVVAALRRLALCRAVLAERRTGATLGDAKGTTNMLDAGTSTRRAQ
Ga0207649_1048489833300025920Corn RhizosphereAIAIAAILPGQLVSVGCQLLFIVAALRDLALRRAMLAERRTGTTLGNGQLASNMLDAGAATRGA
Ga0207681_1116171913300025923Switchgrass RhizosphereAGIPQQSRDLPVAIAAVLPGKLDDVGRQPLLILAALRHLALCRAVLAERRAGATLGDAKLTANMLDTGAATRRAQ
Ga0207681_1164852733300025923Switchgrass RhizosphereAIAAVLSGKLDDIGRQPLLVVAALRHLALCRAVLSERRTGATLGDAKHTTNMLDAGTPTRRAQ
Ga0207706_1149871333300025933Corn RhizosphereKLDDVGRQPLLVIAALRRLALRRAVLAERRASATLGYAKLTTNTLDAGTATRRAQ
Ga0207661_1167618123300025944Corn RhizosphereAILPGKLDDVGRQPLLVVAALRHLALRRAMLAERRTGATLGDMQLCADLLNAGAATRGA
Ga0207712_1113340323300025961Switchgrass RhizosphereLPGELDDVGRQPLFVVAALRRLALCRAMLAERRTGATLGYAKITANMLDTGSATRRAQ
Ga0207668_1215318923300025972Switchgrass RhizosphereDVGRQPLLVVTALRHLALRRAMLAERRTGATLGDAKLTTNMLDAGTPTRRAQ
Ga0207658_1210219623300025986Switchgrass RhizosphereAILSGKLDDVGRQPLLVVTALRHLALRRAMLAERRTGATLGDAKLTTNMLDAGTPTRRAQ
Ga0207641_1256834413300026088Switchgrass RhizosphereSVTVAAILSGKLDDVGRQPLLVVAALRRPALRRAMLAERRTRATLGDAKLNANMLDAGTATRRA
Ga0209956_108482913300026127SoilPRIKSGAGCAAILAGQLDDVGGQPLFIVTAVRDLTLCRAMLAERHTGAALGDGQYPSNMLDTGAATRGA
Ga0209877_103014323300027032Groundwater SandVAIAAVLPGKLDDVGRQPLLILAALRHLALCRAVLAERRAGATLGDAKLTANMLDTGAATRRAQ
Ga0208685_102579633300027513SoilLPGKLDDVGRQPLFVVAALRRLALRRAMLAERRTGATLGYAKITANMLDTGSATRRA
Ga0209874_113009533300027577Groundwater SandAVTAVLSGELDDVGRQPLLVVAALRRLTLRRAVLPERHTRAALGDAKNATNMLDTRTPTRRAQ
Ga0208990_108188023300027663Forest SoilLPGKLDDVGCQPLLVVAALRRLALCRAVLAERRTGATLGDAKLTTNMLDAGTATRRAQ
Ga0209118_105429713300027674Forest SoilGGAQQRCDLAVAVAAILPGKLDDVGRQPLLVVAALRCLALCRAMLAERRTGATLGDAKFTTNMLDTGTATRRAQ
Ga0209819_1007501923300027722Freshwater SedimentLPGKLDDIGRQPLLVVAALRRLALCRAVLAERRTGATLGNAKLTTNMLDAGTATRRA
Ga0209069_1075345913300027915WatershedsPGKLDDVGRQPLLVVAALRHLALRRAMLAERRTGATLGDAKFTTNMLDAGTPTRRAQ
(restricted) Ga0233417_1013664523300028043SedimentLPGKLDDVGRQPLLVVAALRRLALCRAVLAERRTGATLGDAKLTTNMLDTGTATRRAQ
Ga0268264_1246884723300028381Switchgrass RhizosphereVGCEPLLVVAALRHLALRRAMLAERRTGATLGDAKLTTNMLDAGTPTRRAQ
Ga0247823_1140830123300028590SoilRQPLLVVAALRHLALRRAMLPERRTGATLGNAKNTTNMLDTRAPTRRAQ
Ga0307282_1055324933300028784SoilRFSQQSRDLAVAVAAILPGKLDDVGSQPLLVIAALRHLALCRAVVAERRTGVTLGDAKGTTNMLDAGTSTRRAQ
Ga0307310_1039305623300028824SoilLPGKLDDVGRQPLLVVAALRRLALCRAVLAERRTGATLGDAKLTTNMLDAGTATRRAQ
Ga0170818_11102324433300031474Forest SoilRQPLLVVAALRRLALCRAVLAERRTGATLGYAKLTTNMLDAGTATRGAQ
Ga0310888_1095172113300031538SoilKLDDVGRQPLLVVAALRHLALCRAVLAERRTGATLGDAKHTTNMLYAGTPTRRAQ
Ga0307468_10027637723300031740Hardwood Forest SoilLLLRHLQTLAPPDPLNPLVVDQPPGITQQGRDLAVAIAAVLPGEFDDVGRQPLLVVAALRRLALRRAMLPERRTGATLGNANNMTNMLDAGTPTRRAQ
Ga0307468_10065900523300031740Hardwood Forest SoilLPGELDDVGCQPLLIVAALRRLALCRAVLAERRTGATLGDAKLTTNMLDAGTATRRAQ
Ga0310900_1107634523300031908SoilAIAIAAIMPGQLDGVGRQPLFIVAAVWDLALRRAMLAKRSTGAALGDGQLPSNMLNAGAATRGA
Ga0310889_1020048623300032179SoilLSGKLDDVGRQPLFVVAALRRLALRRAMLAERRTGTTLGNGQLASNMLDAGAATRGA
Ga0307471_10407866123300032180Hardwood Forest SoilAGVAQQSRDLSVAIAAVLSGKLDDVGRQPLLVIAALRHLALCRAVLAERRTGATLGDAKGTTNMLDAGTSTRRAQ
Ga0307472_10016773823300032205Hardwood Forest SoilLPGELDDVGRQPLLVVAALRRLALRRAVLPERRTGATLGDVNNATNMLDAGTPTRRAQ
Ga0326723_0438773_9_2153300034090Peat SoilMLSNTCRAWAILPGKLDDVGRQPLLVVAALRHLALRRAVLAERRASAPLGDVKLTSDMLDASAATRRA
Ga0364927_0059861_730_9063300034148SedimentLPSELDDVGRQPLLVVTALRYLALRRAVLAERRTGATLGDAKLTTNMLDAGTATRRAQ
Ga0334925_137464_1_1533300034173Hypolithic BiocrustGGQLLFIMTALRDLTLCRAMLAERSTGAALGDGELSSNMLDAGTATRGAQ
Ga0373917_0003252_962_11383300034692Sediment SlurryLPGELDDVGRQPLLVVAALRRLALRRAMLPERRAGATLGDANNATNMLDAGTPTRRAQ


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