Metagenome / Metatranscriptome Family F069012

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F069012
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	131 residues
Representative Sequence	MMPVEHQVCSHELAKRLAELGVRQESVFWWVDRKLTYTGSRASHAPRQGGIAAFTVAELGEMLPDDIIIPAKNGKPQTHWLRFGRYRGAGKRFWCAYPGGTARTNLEERAPTEADARAQLLIYVLEHHLLSSTELRS
Number of Associated Samples	91
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	66.13 %
% of genes near scaffold ends (potentially truncated)	58.87 %
% of genes from short scaffolds (< 2000 bps)	91.94 %
Associated GOLD sequencing projects	82
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (55.645 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (20.161 % of family members)
Environment Ontology (ENVO)	Unclassified (26.613 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (43.548 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 21.82% β-sheet: 15.76% Coil/Unstructured: 62.42%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF00239	Resolvase	21.77
PF13340	DUF4096	1.61
PF00248	Aldo_ket_red	0.81
PF00106	adh_short	0.81
PF07883	Cupin_2	0.81
PF13561	adh_short_C2	0.81
PF13546	DDE_5	0.81
PF01609	DDE_Tnp_1	0.81
PF00296	Bac_luciferase	0.81
PF02796	HTH_7	0.81
PF00723	Glyco_hydro_15	0.81
PF08450	SGL	0.81
PF00216	Bac_DNA_binding	0.81
PF00491	Arginase	0.81
PF01243	Putative_PNPOx	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	21.77
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	21.77
COG0010	Arginase/agmatinase family enzyme	Amino acid transport and metabolism [E]	0.81
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.81
COG2141	Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase)	Coenzyme transport and metabolism [H]	0.81
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.81
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.81
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.81
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.81
COG3387	Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family	Carbohydrate transport and metabolism [G]	0.81
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.81
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.81
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.81
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.65 %
Unclassified	root	N/A	44.35 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.65 %
Unclassified	root	N/A	44.35 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	55.65 %
Unclassified	root	N/A	44.35 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.35 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	12.90 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	7.26 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.81 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → environmental samples	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.35 %
Candidatus Omnitrophica	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	7.26 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5.65 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.61 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1.61 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.81 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.35 %
unclassified Candidatus Omnitrophica	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica	6.45 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5.65 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.61 %
Legionellales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales	1.61 %
Thermomicrobia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia	0.81 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.35 %
Omnitrophica bacterium SCGC AAA257-O07	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Omnitrophica bacterium SCGC AAA257-O07	6.45 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	5.65 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	1.61 %
Legionellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae	1.61 %
Thermomicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales	0.81 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.35 %
Omnitrophica bacterium SCGC AAA257-O07	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Omnitrophica bacterium SCGC AAA257-O07	6.45 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	5.65 %
Legionella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae → Legionella	1.61 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	1.61 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples	0.81 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.35 %
Omnitrophica bacterium SCGC AAA257-O07	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Omnitrophica bacterium SCGC AAA257-O07	6.45 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	5.65 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	1.61 %
Legionella drancourtii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae → Legionella → Legionella drancourtii	1.61 %
uncultured Thermomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	0.81 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.35 %
Omnitrophica bacterium SCGC AAA257-O07	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Omnitrophica bacterium SCGC AAA257-O07	6.45 %
Bradyrhizobium sp. 4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 4	5.65 %
unclassified Polyangiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae	1.61 %
Legionella drancourtii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae → Legionella → Legionella drancourtii	1.61 %
uncultured Thermomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	0.81 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.35 %
Omnitrophica bacterium SCGC AAA257-O07	species	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Omnitrophica bacterium SCGC AAA257-O07	6.45 %
Bradyrhizobium sp. 4	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 4	5.65 %
Polyangiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium	1.61 %
Legionella drancourtii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae → Legionella → Legionella drancourtii	1.61 %
uncultured Thermomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	0.81 %
uncultured bacterium	species	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004633\|Ga0066395_10541666	Not Available	676	Open in IMG/M
3300005171\|Ga0066677_10421513	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300005180\|Ga0066685_10214158	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium	1323	Open in IMG/M
3300005181\|Ga0066678_10365127	All Organisms → cellular organisms → Bacteria	954	Open in IMG/M
3300005187\|Ga0066675_11304437	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Omnitrophica bacterium SCGC AAA257-O07	535	Open in IMG/M
3300005294\|Ga0065705_10559096	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Omnitrophica bacterium SCGC AAA257-O07	734	Open in IMG/M
3300005332\|Ga0066388_100749968	All Organisms → cellular organisms → Bacteria	1576	Open in IMG/M
3300005332\|Ga0066388_102870250	Not Available	881	Open in IMG/M
3300005332\|Ga0066388_104927152	Not Available	679	Open in IMG/M
3300005445\|Ga0070708_100138905	All Organisms → cellular organisms → Bacteria	2252	Open in IMG/M
3300005558\|Ga0066698_10472079	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 4	854	Open in IMG/M
3300005559\|Ga0066700_10322010	Not Available	1091	Open in IMG/M
3300005559\|Ga0066700_10335070	Not Available	1068	Open in IMG/M
3300005764\|Ga0066903_100670507	All Organisms → cellular organisms → Bacteria	1819	Open in IMG/M
3300005764\|Ga0066903_104593825	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300005937\|Ga0081455_10014383	All Organisms → cellular organisms → Bacteria	7764	Open in IMG/M
3300005937\|Ga0081455_10024247	All Organisms → cellular organisms → Bacteria	5623	Open in IMG/M
3300005937\|Ga0081455_10377533	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300006049\|Ga0075417_10085819	All Organisms → cellular organisms → Bacteria	1411	Open in IMG/M
3300006049\|Ga0075417_10148504	All Organisms → cellular organisms → Bacteria	1089	Open in IMG/M
3300006196\|Ga0075422_10520349	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Omnitrophica bacterium SCGC AAA257-O07	542	Open in IMG/M
3300006844\|Ga0075428_100033703	All Organisms → cellular organisms → Bacteria → Proteobacteria	5651	Open in IMG/M
3300006844\|Ga0075428_100349951	All Organisms → cellular organisms → Bacteria	1586	Open in IMG/M
3300006844\|Ga0075428_100654187	All Organisms → cellular organisms → Bacteria	1121	Open in IMG/M
3300006844\|Ga0075428_100999726	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Omnitrophica bacterium SCGC AAA257-O07	885	Open in IMG/M
3300006845\|Ga0075421_100646317	All Organisms → cellular organisms → Bacteria	1237	Open in IMG/M
3300006847\|Ga0075431_101400098	Not Available	659	Open in IMG/M
3300006852\|Ga0075433_10799668	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Omnitrophica bacterium SCGC AAA257-O07	824	Open in IMG/M
3300006853\|Ga0075420_100416068	All Organisms → cellular organisms → Bacteria	1162	Open in IMG/M
3300006853\|Ga0075420_100590376	All Organisms → cellular organisms → Bacteria	959	Open in IMG/M
3300006871\|Ga0075434_102167537	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Omnitrophica bacterium SCGC AAA257-O07	560	Open in IMG/M
3300006969\|Ga0075419_11266062	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Omnitrophica bacterium SCGC AAA257-O07	546	Open in IMG/M
3300007255\|Ga0099791_10131417	All Organisms → cellular organisms → Bacteria	1163	Open in IMG/M
3300009012\|Ga0066710_102888237	Not Available	675	Open in IMG/M
3300009012\|Ga0066710_102903038	Not Available	672	Open in IMG/M
3300009038\|Ga0099829_10022753	All Organisms → cellular organisms → Bacteria → Proteobacteria	4332	Open in IMG/M
3300009090\|Ga0099827_11635550	Not Available	561	Open in IMG/M
3300009090\|Ga0099827_11730720	Not Available	545	Open in IMG/M
3300009094\|Ga0111539_13419167	Not Available	510	Open in IMG/M
3300009100\|Ga0075418_10256273	All Organisms → cellular organisms → Bacteria	1863	Open in IMG/M
3300009100\|Ga0075418_11072070	All Organisms → cellular organisms → Bacteria	872	Open in IMG/M
3300009100\|Ga0075418_12723607	Not Available	540	Open in IMG/M
3300009137\|Ga0066709_100499629	Not Available	1713	Open in IMG/M
3300009137\|Ga0066709_101851540	Not Available	843	Open in IMG/M
3300009147\|Ga0114129_10642761	Not Available	1370	Open in IMG/M
3300009147\|Ga0114129_12886934	All Organisms → cellular organisms → Bacteria	569	Open in IMG/M
3300009792\|Ga0126374_11671205	Not Available	528	Open in IMG/M
3300009816\|Ga0105076_1037965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 4	859	Open in IMG/M
3300010043\|Ga0126380_10827879	All Organisms → cellular organisms → Bacteria	760	Open in IMG/M
3300010043\|Ga0126380_11130532	Not Available	670	Open in IMG/M
3300010043\|Ga0126380_11529822	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300010043\|Ga0126380_11889659	Not Available	543	Open in IMG/M
3300010043\|Ga0126380_11962233	Not Available	534	Open in IMG/M
3300010046\|Ga0126384_10338169	Not Available	1250	Open in IMG/M
3300010047\|Ga0126382_10163063	Not Available	1542	Open in IMG/M
3300010047\|Ga0126382_10429674	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300010047\|Ga0126382_10629684	Not Available	888	Open in IMG/M
3300010047\|Ga0126382_12185315	Not Available	532	Open in IMG/M
3300010359\|Ga0126376_10228561	All Organisms → cellular organisms → Bacteria	1565	Open in IMG/M
3300010359\|Ga0126376_12161605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Thermomicrobia → Thermomicrobiales → environmental samples → uncultured Thermomicrobiales bacterium	601	Open in IMG/M
3300010360\|Ga0126372_12392848	Not Available	579	Open in IMG/M
3300010360\|Ga0126372_12455254	Not Available	572	Open in IMG/M
3300010362\|Ga0126377_11044092	All Organisms → cellular organisms → Bacteria	885	Open in IMG/M
3300010366\|Ga0126379_10525925	All Organisms → cellular organisms → Bacteria	1259	Open in IMG/M
3300010366\|Ga0126379_11055354	Not Available	918	Open in IMG/M
3300010398\|Ga0126383_10811798	Not Available	1019	Open in IMG/M
3300010398\|Ga0126383_11895335	Not Available	684	Open in IMG/M
3300010399\|Ga0134127_13098056	Not Available	543	Open in IMG/M
3300011270\|Ga0137391_10580985	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae → Legionella → Legionella drancourtii	941	Open in IMG/M
3300012096\|Ga0137389_11521058	Not Available	565	Open in IMG/M
3300012189\|Ga0137388_11711489	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica → unclassified Candidatus Omnitrophica → Omnitrophica bacterium SCGC AAA257-O07	562	Open in IMG/M
3300012207\|Ga0137381_10871412	Not Available	779	Open in IMG/M
3300012211\|Ga0137377_10908445	All Organisms → cellular organisms → Bacteria	812	Open in IMG/M
3300012363\|Ga0137390_11954711	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300012917\|Ga0137395_10338622	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium	1070	Open in IMG/M
3300012917\|Ga0137395_10671708	Not Available	749	Open in IMG/M
3300012925\|Ga0137419_10192726	All Organisms → cellular organisms → Bacteria	1504	Open in IMG/M
3300012930\|Ga0137407_11164984	Not Available	731	Open in IMG/M
3300012930\|Ga0137407_11794022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 4	585	Open in IMG/M
3300012944\|Ga0137410_10502925	All Organisms → cellular organisms → Bacteria	991	Open in IMG/M
3300012948\|Ga0126375_10481209	All Organisms → cellular organisms → Bacteria	920	Open in IMG/M
3300012971\|Ga0126369_10144990	All Organisms → cellular organisms → Bacteria	2224	Open in IMG/M
3300014150\|Ga0134081_10108839	All Organisms → cellular organisms → Bacteria	879	Open in IMG/M
3300015241\|Ga0137418_10041023	All Organisms → cellular organisms → Bacteria → Proteobacteria	4268	Open in IMG/M
3300015245\|Ga0137409_11455210	Not Available	532	Open in IMG/M
3300015371\|Ga0132258_10146386	All Organisms → cellular organisms → Bacteria → Proteobacteria	5659	Open in IMG/M
3300015372\|Ga0132256_100912696	Not Available	994	Open in IMG/M
3300015372\|Ga0132256_103466500	Not Available	530	Open in IMG/M
3300017792\|Ga0163161_11186885	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300018066\|Ga0184617_1143387	Not Available	695	Open in IMG/M
3300018468\|Ga0066662_12216280	All Organisms → cellular organisms → Bacteria → PVC group → Candidatus Omnitrophica	576	Open in IMG/M
3300019208\|Ga0180110_1229759	Not Available	512	Open in IMG/M
3300019228\|Ga0180119_1107079	Not Available	535	Open in IMG/M
3300025961\|Ga0207712_10115819	All Organisms → cellular organisms → Bacteria	2018	Open in IMG/M
3300027324\|Ga0209845_1004879	Not Available	2307	Open in IMG/M
3300027490\|Ga0209899_1018895	All Organisms → cellular organisms → Bacteria	1551	Open in IMG/M
3300027846\|Ga0209180_10117782	All Organisms → cellular organisms → Bacteria	1523	Open in IMG/M
3300027873\|Ga0209814_10040127	Not Available	1946	Open in IMG/M
3300027874\|Ga0209465_10067273	Not Available	1733	Open in IMG/M
3300027880\|Ga0209481_10079771	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Legionellales → Legionellaceae → Legionella → Legionella drancourtii	1558	Open in IMG/M
3300027907\|Ga0207428_10167957	Not Available	1663	Open in IMG/M
3300027909\|Ga0209382_10371871	All Organisms → cellular organisms → Bacteria → environmental samples → uncultured bacterium	1597	Open in IMG/M
3300027909\|Ga0209382_10583171	All Organisms → cellular organisms → Bacteria	1220	Open in IMG/M
3300027949\|Ga0209860_1053455	All Organisms → cellular organisms → Bacteria	536	Open in IMG/M
3300027952\|Ga0209889_1034696	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 4	1091	Open in IMG/M
3300027954\|Ga0209859_1081721	Not Available	510	Open in IMG/M
3300028587\|Ga0247828_10101757	Not Available	1362	Open in IMG/M
3300028884\|Ga0307308_10424069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 4	638	Open in IMG/M
3300030574\|Ga0247648_1192540	All Organisms → cellular organisms → Bacteria	524	Open in IMG/M
3300030904\|Ga0308198_1013369	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 4	1022	Open in IMG/M
3300031093\|Ga0308197_10484740	Not Available	503	Open in IMG/M
3300031094\|Ga0308199_1182713	Not Available	519	Open in IMG/M
3300031114\|Ga0308187_10032844	All Organisms → cellular organisms → Bacteria	1323	Open in IMG/M
3300031114\|Ga0308187_10060419	All Organisms → cellular organisms → Bacteria	1074	Open in IMG/M
3300031562\|Ga0310886_10572722	Not Available	690	Open in IMG/M
3300031820\|Ga0307473_11461997	Not Available	517	Open in IMG/M
3300032013\|Ga0310906_10239833	All Organisms → cellular organisms → Bacteria → Proteobacteria	1125	Open in IMG/M
3300032174\|Ga0307470_11848189	Not Available	513	Open in IMG/M
3300032180\|Ga0307471_103240721	Not Available	577	Open in IMG/M
3300032205\|Ga0307472_100981287	Not Available	790	Open in IMG/M
3300033551\|Ga0247830_10878428	Not Available	714	Open in IMG/M
3300034480\|Ga0314789_023953	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 4	569	Open in IMG/M
3300034661\|Ga0314782_207180	Not Available	511	Open in IMG/M
3300034668\|Ga0314793_149735	Not Available	527	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	73.39%
Host-Associated	Host-Associated	26.61%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.97%
Plants	Host-Associated → Plants	26.61%
Aquatic	Environmental → Aquatic	2.42%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere	22.58%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.03%
Freshwater	Environmental → Aquatic → Freshwater	1.61%
Sediment	Environmental → Aquatic → Sediment	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.87%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	20.97%
Loam	Environmental → Terrestrial → Soil → Loam	7.26%
Sand	Environmental → Terrestrial → Soil → Sand	4.84%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.23%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.61%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.32%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	20.97%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	8.87%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.65%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.65%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	4.84%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.23%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.81%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	20.16%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	17.74%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	15.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.65%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.84%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	4.84%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	4.03%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.23%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	2.42%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.61%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.61%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.81%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.81%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009816	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300019208	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT231_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019228	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT790_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027324	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60 (SPAdes)	Environmental	Open in IMG/M
3300027490	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027949	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_40_50 (SPAdes)	Environmental	Open in IMG/M
3300027952	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027954	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_50_60 (SPAdes)	Environmental	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300030574	Metatranscriptome of soil fungal communities from truffle orchard in Rollainville, France - Db1 (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030904	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_202 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031094	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_203 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031114	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_182 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034480	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034661	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034668	Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066395_105416662	3300004633	Tropical Forest Soil	MMPIEHQVCSHELATRLAALGVQQEGVFWWVDRKVTYTAGRASHAPRQGGIAAFTSAELGEMLPDEVIIPAKNGKPQTHWLRFGRYRGAGKRFWCAYPGGTARTNLEERAPTEADARAQLLIY
Ga0066677_104215131	3300005171	Soil	MMPLEQQVCSYELAQRLAALGVRQESVFWWIDRTLTYTGGRTSHAPRQGGIAAFTVAELGAMLPDEITIPAKNGKLHTHWLRFGRYRVAGNRFWCAYPGGTARTNLEERAHTEADARAQLLIYLLEHHLLSSTELHA*
Ga0066685_102141581	3300005180	Soil	VRQESVFWWVDRKLTYTGGLASHAPLQGGVAAFIVAELGEMLPDELIIPSKNGKPYTHWLRFGRYRGAGQRFWCAYPGGNARTTLEERAHTEADARAKLLIYVLEHQLLSPTGLCS*
Ga0066678_103651272	3300005181	Soil	MMPLEQQVCSYELAQRLAALGVRQESVFWWIDRTLTYTGGRTSHAPRQGGIAAFTVAELGAMLPDEITIPAKNGTLHTHWLRFGRYRVAGNRFWCAYPGGTARTNLEERAHTEADARAQLLIYLLEHHLLSSTELHA*
Ga0066675_113044371	3300005187	Soil	QVCSHELAQRLAALGVRQESVFWWIDRMLTYTGGRTSHAPRQGGIAAFTVAELGAMLPDEITIPAKNGKLHTHWLRFGRYRVAGNRFWCAYPGGTARTNLEERAHTEADARAKLLIYLLEHKLLSPTELHS*
Ga0065705_105590961	3300005294	Switchgrass Rhizosphere	MMPVEHQGCSHELAQRLAALGVRQERVFWWIDGKVTYTGGRASHAPRHGGIAAFTVAELGEMLPDEVIIPAKNGKPQTHWLRFGRYRGAGQRFWCAYPGGTTRTTLEERARTEADARAQLLISLLEHQLLSLTALRS*
Ga0066388_1007499683	3300005332	Tropical Forest Soil	MIPLEQQVCSHGLATRLAELGVRQESVFWWVDGKVTYTGGRVSHAPRHGGIAAFTVAELGEMLPDEVIIPAKNGKPHTHWLRFGRYRGAGHRFWCAYPGGTARTNPEERAPTEADARAQLLIYLLEHHLHPSLGGRS*
Ga0066388_1028702502	3300005332	Tropical Forest Soil	MMPIEHQVCSHELATRLAALGVQQESVFWWVDRKVTYTAGRASHAPRQGGIAAFTAAELGEMLPDEIIIPAKNGKPQTHWLRFGRYRGAGKRFWCAYPGGTARTNPEERAPTEADA
Ga0066388_1049271522	3300005332	Tropical Forest Soil	VRQESVFWWVERKLTYTGGLASQAQLRGGISAFTVAELGEMLPNEINIPSKNGKPRSYNHWLRFGRYRVSGNACWCAYPGGTARTNLEARANTEADARAKMLIYLLENHLLSPENL*
Ga0070708_1001389051	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPLETQVCSRELAQRLAELGVRQESVFWWVERKLTYTGGLASQAQLRGGISAFTVAELGEMLPNEINIPSKNGKPRSYNHWLRFGRYRVLVNAFWCAYPGGTARTNLEERANTEADARAKMLIYL
Ga0066698_104720791	3300005558	Soil	MIPFEQQVCSRELAQRLEALGVRQESEFWWVDRKLTYTGGLASHAQLQGGVAAFTVAELGEMLPDELIIPSKNGKPYTHWLRFGRYRGAGQRFWCAYPGGNARTTLEERAHTEADARAKLLIYVLEHQLLSPTGLCS*
Ga0066700_103220102	3300005559	Soil	MMPVEQQVCSHELATRLAELGVRQESVFWWVDRKLTYTGGRASLAPLQGGIAAFTGAELGEMLPDDITIPAKNGKPYTHWLRFGRYRIAGNRFWCAYPGGTAQTNLEERAHTEADARAKLLIYVLEHHLLPSLGGRS*
Ga0066700_103350702	3300005559	Soil	RQESVFWWIDRTLTYTGGRTSHAPRQGGIAAFTVAELGAMLPDEITIPAKNGKLHTHWLRFGRYRVAGNRFWCAYPGGTARTNLEERAHTEADARAQLLIYLLEHHLLSSTELHA*
Ga0066903_1006705072	3300005764	Tropical Forest Soil	MMPVEHQVCSHELAQRLAELGVRQESVFWWADRKLTYTGSRTSHAPRQGGIAAFTVAELGEMLPDEVIIPAKNGKPHTHWLRFGRYRGTGHRFWCAYPGGTARTTLEERAPTEADARAQLLIYLLEHKLLSPTELH*
Ga0066903_1045938251	3300005764	Tropical Forest Soil	PMMPIEHQVCSHELAARLAELGVRQESAFWWVDRKLTYTGGRASHTPRHGGIAAFTAAELGEMLPDEVIITSKNGKSQTHWLRFGRYRGAGQRFWCAYPGGTARTTLEERAHTEADARAQLLIYLLEHHLLSAMDLRS*
Ga0081455_100143831	3300005937	Tabebuia Heterophylla Rhizosphere	QDASGVFAEPATCKVKPMMPIEHQVCSHELATRLAALGVRQESVFWWVDRKVTYTAGRASHAPRHGGITAFTAAELGEMLPDEIIIPAKNGKPQTHWLRFGRYRDAGKRFWCAYLGGTARTTLKERAPTEADARAQLLIYLLEHQLLSPTTLRS*
Ga0081455_100242473	3300005937	Tabebuia Heterophylla Rhizosphere	MMPIEHQVCSHELATRLAALGVQQESVFWWVDRKVTYTAGRASHAPRQGGIAAFTAAELGEMLPDEIIIPAKNGKPQTHWLRFGRYRGAGQRFWCAYPGGTARTNPEERAPTEADARAQLLIYLLEHQLLSPTALR*
Ga0081455_103775332	3300005937	Tabebuia Heterophylla Rhizosphere	MMPVEHQVCSHELATRLAELGVRQESVFWWVDGKLTYTGGRASHAPRHGGIAAFTVAELGEMLPDEVIIPAKNGKLHTHWLRFGRYRGAGQRFWCAYPGGTARTHLEERAHTEADARAQLLIYLLEHHLHPSLGGRS*
Ga0075417_100858192	3300006049	Populus Rhizosphere	MMPLEQQVCSHELATRLAELGVRQESVFWWVDGKLTYTGGRASHAPRHAGIAAFTVAELGTMLPDEVIIPAKNGKPHTHWLRFGRYRGAGNRFWCAYPGGTARTTLEERAHTEADARAQLLISLLEHHLLPSLGGRS*
Ga0075417_101485042	3300006049	Populus Rhizosphere	MMPVEHQVCSHELAKRLAELGVRQESVFWWVDRKLTYTGSRASHAPRQGGIAAFTVAELGEMLPDDIIIPAKNGKPQTHWLRFGRYRGAGKRFWCAYPGGTARTNLEERAPTEADARAQLLIYVLEHHLLSSTELRS*
Ga0075422_105203491	3300006196	Populus Rhizosphere	MMPLEQQVCSRELAKRLAELGVRQESAFWWIDRKLTYTGGRSSPAQLKGGVAAFTVAELGEMLPDEITIPAKNGKPYTHWLRFGRYRGAGHRFWCTYPGGTAQTTLEERAHTEADARAQLLIYLNLLSAPLTIPL
Ga0075428_1000337038	3300006844	Populus Rhizosphere	MMPLEQQVCSHELATRLAELGVRQESVFWWVDGKLTYTGGRASHAPRHAGIAAFTVAELGTMLPDEVIIPAKNGKPHTHWLRFGRYRGAGNRFWCAYPGGTARTTLEERAHTEADARAQLLISLLEHH
Ga0075428_1003499513	3300006844	Populus Rhizosphere	MMSVEHQVCSHALAQRLAALGVRQESVFWWVDGKVTYTGGRASHAPGHGGIAAFTAAELGAMLPDEIIIPAKNGKPQTHWLRFGRYRGAGQRFWCAYPGGTARTHLEERAPTEAGARAQLLIYLLEHQLLAPTALRS*
Ga0075428_1006541871	3300006844	Populus Rhizosphere	MMPVEQQVCSHELAKRLAELGVRQESVFWWVDRKLTYTGGRASHAPRQGGIAAFTAAELGEMLPDEVIIPSKNGKPHTHWLRFGRYRGAGHRFWCAYPGGTARTNLEERAHTEADARAQLLISLLEHH
Ga0075428_1009997261	3300006844	Populus Rhizosphere	MMPIEHQVCSHELATRLAALGVRQESVFWWVDGKVTYTAGRASHAPRHGGIAAFTAAELGEMLPDDIIIPAKNGKPQTHWLRFGRYRGAGQRFWCAYPGGTARTNLEERAPTEADARAQLLIYLLEHQLLSPTARRS*
Ga0075421_1006463171	3300006845	Populus Rhizosphere	MMPLEQQVCSHELATRLAELGVRQESVFWWVDGKLTYTGGRASHAPRHAGIAAFTVAELGTMLPDEVIIPAKNGKPHTHWLRFGRYRGAGNRFWCAYPGGTARTTLEERAHTEADARAQLLI
Ga0075431_1014000981	3300006847	Populus Rhizosphere	MIPFEHQVCSRELAQRLAELGVRQESVFWWVDRKLMYTGGRASHAPLQGGIAAFTVAELGAMLPDDIIIPAKNGKPHTHWLRFGRYRGAGDRFWCAYPGGTARTNLEERAHTEADARAKLLIYLLEHHLLSSTGLHA*
Ga0075433_107996681	3300006852	Populus Rhizosphere	MMPIEHQVCSHALAKRLAELGLRQESVFWWVDGKVTYTGGRASHAPLHGGIAAFTVAELGEMLPDEVVIPAKNGKPHTHWLRFGRYRGAGQRFWCAYPGGTARTTLEERAHTEADARAQLLIYLLEHQLLSPTARRS*
Ga0075420_1004160681	3300006853	Populus Rhizosphere	GEVNPMMPVEHQVCSHELAQRLAALGVRQESVFWWIDGKLTYTGGRASHAPRHAGIAAFTVAELGTMLPDEVIIPAKNGKPHTHWLRFGRYRGAGNRFWCAYPGGTARTTLEERAHTEADARAQLLISLLEHHLLPSLGGRS*
Ga0075420_1005903763	3300006853	Populus Rhizosphere	MMPVEQQVCSHELAKRLAELGVRQESVFWWVDRKLTYTGGRASHAPRQGGIAAFTAAELGEMLPDEVIIPSKNGTPHTHWLRFGRYRGAGNRFWCAYPGGTARTNLEERAPTEADARA
Ga0075434_1021675371	3300006871	Populus Rhizosphere	MMPLEQQVCSHELAQRLAELGVRQESVFWWVDRKLTYTGSRASHAPRQGGIAAFTVAELGEMLPDEVIIPAKNGKPHTHWLRFGRYRGTGHRFWCAYPGGTARTTLEERAPTEADARAQLLIYVLEHHLLSSTELRS*
Ga0075419_112660621	3300006969	Populus Rhizosphere	MMPIEHQVCSHELATRLAELGVRQESVFWWVDGKLTYTGGRASHAPRHAGIAAFTVAELGTMLPDEVIIPAKNGKPHTHWLRFGRYRGAGNRFWCAYPGGTARTTLEERAHTEADARAQLLISLLGGCQVKCVTFFTPAPALQTESQTD
Ga0099791_101314173	3300007255	Vadose Zone Soil	VKGGSAARLFRNIRSAYTFEATQMIPLEQQVCSRELAQRLEELGVRQESVFWWVDRKLTYTGGLAAHAQLQGGVAAFTVAELGEMLPDELTIPAKNGKPHTHWLRFGRYRGAGHRFWCAYPGGTARTNLEERAHTEADAR
Ga0066710_1028882371	3300009012	Grasslands Soil	MMPIEHQVCSHELATRLAELGVRQESVFWWVDRKLTYTGGRASHAPLHGGIAAFTVAELGEMLPDEITIAAKNGKPYTHWLRFGRYRGAGQRFWCAYPGGAARTNLEERAPTEADARAKLLISLLEHHLLSTTELRS
Ga0066710_1029030381	3300009012	Grasslands Soil	MMPLEQQVCSHELAQRLAALGVRQGSVFWWIDRTLTYTGGRTSHAPRQGGIAAFTVAELGAMLPDEITIPAKNGTLHTHWLRFGRYRVAGNRFWCAYPGGTARTNLEERAHTEADARAQLLIYLLEHHLLSSTELHA
Ga0099829_100227535	3300009038	Vadose Zone Soil	VIEAALQDAAWVCAKPATCEVNPMMPLEQQVCSHELATRLAELGVQQESVFWWVDRTLTYTGGRASHAPRQGGIAAFTVAELGEMLPDDIIIPSKNGKPHTHWLRFGRYRGAGNRFWCAYPGGTVRTNLEERAHTEADARAQLLISLLEHQLLSPTELRS*
Ga0099827_116355501	3300009090	Vadose Zone Soil	GVRQESVFWWVDRKLTYTGGLASHAQRQGGLAAFTVAELGEMLPDDLTIPSKNGKPHTHWLRFGRYRGAGHRFWCAYPGGTARTNLEERAHTEADARAKLLIYVLEHHLLSATGLRS*
Ga0099827_117307201	3300009090	Vadose Zone Soil	MMPVEHQVCSHELAKRLAELGVRQESVFWWIDRKLTYTGGRASHAPLQGGIAAFTVAELGEMLPDDITIPSKNGKPHTHWLRFGRYRVAGHRFWCAYPRGTTRTNLEERAHTEADARAKL
Ga0111539_134191672	3300009094	Populus Rhizosphere	MMSVEHQVCSHALAQRLAALGVRQESVFWWVDGKVTYTAGRASHAPRHGGIAAFTAAELGEMLPDDIIIPAKNGKPQTHWLRFGRYRGAGQRFWCAYPGGTARTNLEERAPTEADARA
Ga0075418_102562733	3300009100	Populus Rhizosphere	VGVKLATCEVNPMMPLEQQVCSHELATRLAELGVRQESVFWWVDGKLTYTGGRASHAPRHAGIAAFTVAELGTMLPDEVIIPAKNGKPHTHWLRFGRYRGAGNRFWCAYPGGTARTTLEERAHTEADARAQLLISLLEHHLLPSLGGRS*
Ga0075418_110720702	3300009100	Populus Rhizosphere	MIPFEHQVCSRELAQRLAELGVRQESVFWWVDRKLMYTGGRASHAPLQGGIAAFTVAELGAMLPDDIIIPAKNGKPHTHWLRFGRYRGAGDRFWCAYPGGTARTNLEERAHTEADARAKLLIYVLEHKLLSPTELCS*
Ga0075418_127236071	3300009100	Populus Rhizosphere	MMPIEHQVCSHELATRLAALGVRQESVFWWVDGKVTYTAGRASHAPRHGGIAAFTAAELGEMLPDDIIIPAKNGKPQTHWLRFGRYRGAGQRFWCAYPGGTARTNLEERAPTEADARAQLLIYLLEHQ
Ga0066709_1004996292	3300009137	Grasslands Soil	MMPIEHQVCSHELATRLAELGVRQESVFWWVDRKLTYTGGRASHAPLHGGIAAFTVADLGEMLPDEITIPAKNGKPYTHWLRFGRYRGAGQRFWCAYPGGAARTNLEERAPTEADARAKLLISLLEHHLLSTTELRS*
Ga0066709_1018515401	3300009137	Grasslands Soil	MMPLEHQVCSHELAQRLAELGVRQDSVLWWVDRKLTYTGGRASHAPRHGGIAAFTAAELGEMLPDDIIITAKNGKPHTHWLRFGRYRGAGQRFWCAYPGGTARTTLEERAHTEADARAKLLISLLEHQLLSAAELRS*
Ga0114129_106427611	3300009147	Populus Rhizosphere	SHTLAKRLAELGVRQESVFWWVDGKVTYTGGRASHAPLHGGIAAFTVAELGEMLPDEVIIPAKNGKPHTHWLRFGRYRGAGQRFWCAYPGGTARTTLEERAHTEADARAQLFIYLLEHQLLSPTARRS*
Ga0114129_128869341	3300009147	Populus Rhizosphere	AKRLEELGVRQESAFWWIDRKLTYTGGRSSPAQLKGGVAAFTVAELGEMLPDEITIPSKNGKLHTHWLRFGRYRVAGDRFWCAYPGGTARTNLEERAPTEADARAKLLIYLLEHQLLSSTGLHA*
Ga0126374_116712051	3300009792	Tropical Forest Soil	MMPVEHQVCSHELAQRLAELGVRQESVFWWVDQKLTYTGGRASHAPRHGGIAAFTAAELGEMLPDEVSIPSKNGKPYTHWLRFGRYRGAGHRFWCAYPGGTARTHLEERAHTEADARAQLLIYLLEHHLLSAMDLRS*
Ga0105076_10379652	3300009816	Groundwater Sand	MIPLEQQVCSRELAKRLEELGVRQESVFWWVDRKLTYTGGLASHAQLQGGVAAFTVAELGEMLPDDITIPSKNGKPHTHWLRFGRYRGAGHRFWCAYPGGTARTNLEERADTEADARAKLLELFRNK
Ga0126380_108278791	3300010043	Tropical Forest Soil	LAKRLEELGVRQESAFWWVDRKLTYTGGRASHAPRQGGIAAFTATELGEMLPDEVIIPSKNGKPHTHWLRFGRYRGAGHRFWCAYPGGTARTNLEERAHTEADARAKLLIYLLEHHLLPSLGGHASSRTVRE*
Ga0126380_111305321	3300010043	Tropical Forest Soil	PMMPVEHQVCSHALATRLAALGVRQESVFWWVDRKVTYTAGRASHAPLSGGIAAFTAAELGEMLPDEIIIPAKNGKPHTHWLRFGRYRGAGKRFWCAYPGGTARTHLEERAPTEADARAQLLLYLLEHQLLSPTARRS*
Ga0126380_115298222	3300010043	Tropical Forest Soil	MMPVEHQVCSHELAQRLAELGVRQESVFWWADRKLTYTGSRTSHAPRQGGIAAFTVAELGEMLPDEVIIPAKNGKPHTHWLRFGRYRGAGHRFWCAYPGGTARTTLEERAPTEADARAQLLIYLLEHQLLSPT
Ga0126380_118896591	3300010043	Tropical Forest Soil	ASGVVAALVTCEFHPMMPLEHQVCSHELAQRLAELGVRQDSVFWWVDRKLTYTGGRASHAPRHGGIAAFTAAELGEMLPDDIIITAKNGKPHTHWLRFGRYRGAGPRFWCAYPGGTARTTLEERAYTEADARAKLLISLLEHQLLSAAALRS*
Ga0126380_119622331	3300010043	Tropical Forest Soil	RQESVFWWVDRKLTYIGGRASHVQLQGGITAFIVAEMGEMLPDEVIIPSKNGKPHTHWLRFGRYRGAGHRFWCAYPGGTARTNLEERAHTEADARAKLLIYLLEHHLLSSAGLHA*
Ga0126384_103381691	3300010046	Tropical Forest Soil	MMPVEYQVCSHELATRLAALGVQQEGVFWWVDRKVTYTAGRASHAPRQGGIAAFTAAELGEMLPDEVIIPAKNGKPQTHWLRFGRYRGAGKRFWCAYPGGTARTHLEERAPIEADARAQLFISFLEHQLLSPTALR*
Ga0126382_101630632	3300010047	Tropical Forest Soil	RQESVFWWVDRKLMYTGGRASHVPLHDGIAAFTVAELGEMLPDDIIITAKNGKPHTHWLRFGRYRGAGQRFWCAYPGGTSRTTLEERAHTEADARAKLLISLLEHQLLSAAELRS*
Ga0126382_104296741	3300010047	Tropical Forest Soil	ALTKGGVNPMMPLEHQVCSHALAQRLAALGVRQESVFWWVDGKLTYTGGRASHAPRHGGIAAFTVAELGEMLPDEVIIPAKNGKPYTHWLRFGRYRGAGHRFWCAYPGGTARTHLEERAHTEADARAKLLISLLEHHLLPSLGGHASSRTVRE*
Ga0126382_106296841	3300010047	Tropical Forest Soil	MMPVEHQVCSHALATRLAALGVRQESVFWWVDGKVTYTGGRASHAPRHGGIAAFTVAELGEMLPDDVIIPAKNGKPQTHWLRFGRYRGAGQRFWCAYPGGTARTTLEERAPTEADARAQLLIYLLDHQLLSPTALRS*
Ga0126382_121853151	3300010047	Tropical Forest Soil	ALAQRLAELGVRQESVWWWVDGKVTYSGGRASHAPRHGGIAAFTVAELGAMLPDEITIPAKNGKLHTHWLRFGRYRGAGNRFWCAYPGGTARTTLEERAATEADARAQLVIYLLEHQLLSPTGLGS*
Ga0126376_102285612	3300010359	Tropical Forest Soil	MIPLEQQVCSHGLATRLAELGVRQESVFWWVDGKVTYTGGRVSHAPRHGGIAAFTVAELGEMLPDEVIIPAKNGKPHTHWLRFGRYRGAGHRFWCAYPGGTARTNLEERAHTEADARAQLLIYLLEHHLHPSLGGRS*
Ga0126376_121616051	3300010359	Tropical Forest Soil	EHQVCSHELAQRLAELGVRHESVFWWADRKLTYTGSRTSHAPRHGGIAAFTVAALGEMLPDEVSIPAKNGKPQTHWLRFGRYRGTGHRFWCAYPGGTARTTLEERAPTEADARAQLLIYLLEHKLLSPTELH*
Ga0126372_123928481	3300010360	Tropical Forest Soil	MPVETQVCSRELAQRLAELGVRQESVFWWVDRKLTYTGGLTSQVQLRGGIAAFTVAELGAMLPDEINIPAKTGKPRAYNHWLRFGRYRVAGEACWCAYPGGTDRTNLETRANTEADAR
Ga0126372_124552542	3300010360	Tropical Forest Soil	VFWWVDRKLTYTGGLTSQVQLRGGLAAFTVAELGAMLPDEINIPAKTGKPRAYNHWLRFGRYRVAGEACWCAYPGGTDRTNLETRANTEADARAKMLIYLLENHLLSPANL*
Ga0126377_110440921	3300010362	Tropical Forest Soil	MIPLEQQVCSHELAKRLAELGVWQEGVFWWIDGKLTYTGGRASHAPLHGGIAAFTVAELGEMLPDEVIIASKNGKPHTHWLRFGRYRGTGKRFWCAYPGGTARTNLEERAPTEADARAQLLIYLLEHQLLSPTALRS*
Ga0126379_105259253	3300010366	Tropical Forest Soil	MIPLEQQVCSHGLATRLAELGVRQESVFWWVDGKVTYTGGRVSHAPRHGGIAAFTVAELGEMLPDEVIIPAKKGKPQTHWLRFGRYRGAGHRFWCAYPGGTTRSNLEERAPTEADARAQLLIYLLEHHLHPSL
Ga0126379_110553542	3300010366	Tropical Forest Soil	MMPIEHQVCSHELATRLAALGVQQEGVFWWVDRKVTYTAGRASHAPRQGGIAAFTAAELGEMLPDEVIIPAKNGKPQTHWLRFGRYRGAGKRFWCAYPGGTARTNLEERAPTEADARAQLLIYLLEHQLLSPTALR*
Ga0126383_108117981	3300010398	Tropical Forest Soil	MMPLEHQVCAHELAQRLAELGVRQDSVFWWVDRKLTYTGGRISHAPRQGGIAAFTAAELGEMLPDEVIISAKNGKPHTHWLRFGRYRGAGPRFWCAYPGGTARTTLEERAHTEADARAKLLISLLEHQLLSAAALRS*
Ga0126383_118953351	3300010398	Tropical Forest Soil	MMPIEHQVCSHELATRLAALGVQQESVFWWVDRKVTYTAGRASHAPRQGGIAAFTAAELGEMLPDEIIIPAKNGKPQTHWLRFGRYRGAGPRFWCAYPGGTARTTLEERAHTEAGA
Ga0134127_130980561	3300010399	Terrestrial Soil	HELARRLAELEVRQESVFWWVDRKLMYTGGRASHAPLQGGIAAFTAAELGEMLPDDITIPAKNGKLHTHWLRFGRYRAAGPRFWCAYPGGTARTTIEERAYTEADARAKLLIYLLEHHLLSPTGLCF*
Ga0137391_105809851	3300011270	Vadose Zone Soil	VKGGSAARLFRNIRSAYKFEATQMIPLEQQVCSRELAQRLEELGVRQESVFWWVDRKVTYTGGRALHAQLQGGVAAFTVAELGEMLPDELTIPAKNGKPHTHWLRFGRYRGAGT
Ga0137389_115210581	3300012096	Vadose Zone Soil	MIPLEQQVCSRELAQRLEELGVRQESVFWWVDRKLTYSGGRAVHAQLQGGVAAFTVAELGAVLPDDITIPSKNGKPRVHTHWLRFGRYRGAGTRFWCAYPGGTARTNFEERAHTEADARAKLLIYLLELFLNRKEPSSTDQHRYQ*
Ga0137388_117114891	3300012189	Vadose Zone Soil	MMPLETQVCSRELAQRLAELGVRQESVFWWVEKKLTYTGGLASQAQLRGGISAFTVAELGEMLPNEINIPSKNGKPRSYNHWLRFGRYRVSGNAFWCAYPGGTARTNLEER
Ga0137381_108714122	3300012207	Vadose Zone Soil	VRQESVFWWVDRKLTYTGGRASHAQLQGGLAAFTVAELGEMLPDDLTIPSKNGKPHTHWLRFGRYRGAGQRFWCAYPGGTARTNLEERANTEADARAKLLIYLLEHHLLSATGLRS*
Ga0137377_109084452	3300012211	Vadose Zone Soil	MMPLETQVCSRELAQRLAELGVRQESVFWWVEKKLTYTGGLASQAQLRGGISAFTVAELGEMLPNEINIPSKNGKPRSYNHWLRFGRYRVSGNAFWCAYPGGTARTNLEERANTEADARAKML
Ga0137390_119547111	3300012363	Vadose Zone Soil	VCSRELAQRLEALGVRQESVFWWVDRKLTYTGGLAAHAQLQGGVAAFTVAELGEMLPDELTIPAKNGKPHTHWLRFGRYRGAGTRFWCAYPGGTARTNFEERAHTEADARAKLLIALLEHKLLSPTG
Ga0137395_103386221	3300012917	Vadose Zone Soil	EELGVRQESVFWWVDRKLTYTGGLAAHAQLQGGVAAFTVAELGEMLPDELTIPAKNGKPHIHWLRFGRYRGAGQRFWCAYPGGNARSNLEERAHTEADARAKLLIYLLEHKLLSPTGLRS
Ga0137395_106717081	3300012917	Vadose Zone Soil	EELGVRQESVFWWVDRKLTYTGGLAAHAQLQGGVAAFTVAELGEMLPDELTIPAKNGKPHTHWLRFGRYRGAGTRFWCAYPGGTARTNFEERAHTEADARAKLLIALLEHKLLSPTGCRS
Ga0137419_101927261	3300012925	Vadose Zone Soil	MIPLEQQVCSRELAQRLEALGVRQESVFWWVDRKLTYTGGLAAFTVAELGEMLPDELTIPAKNGKPHTHWLRFGRYRVAGNRFWCAYPGGTTRTNLEERAHTEADARAQLLIYLL
Ga0137407_111649841	3300012930	Vadose Zone Soil	MMPLEQQVCSYELAKRLAELGVRQESVFWWVDRKLTYTGGLASHAQLQGGLAAFTVAELGAMLPDDLTIPSKNGKPHTHWLRFGRYRVAGNRFWCAYPGGTARTNLEERAH
Ga0137407_117940221	3300012930	Vadose Zone Soil	MMPLEQQVCSHELAKRLAELGVRQESVFWWIDRKLTYTGGRTSHAPLQGGVAAFTVAELGEMLPDDITIPSKHGKPRAHTHWLRFGRYRVAGNRFWCAYPGGSARTNLEERAHTEADARTKILI
Ga0137410_105029251	3300012944	Vadose Zone Soil	MMPLEQQVCSHELAKRLAELGVQQESVFWWIDRKVTYTGGRASHAPLQGGIAAFTVAELGEMLPDDIIIPSKNGKPHTHWLRFGRYRVAGNRFWCAYPGGTARTNLEERAHTE
Ga0126375_104812092	3300012948	Tropical Forest Soil	CSHGLATRLAELGVRQESVFWWVDGKVTYTGGRVSHAPRHGGIAAFTVAELGEMLPDEVIIPAKNGKPHTHWLRFGRYRGAGNRFWCAYPGGTARTNLEERAHTEADARAQLLIYLLEHHLHPSLGGRS*
Ga0126369_101449901	3300012971	Tropical Forest Soil	MMPIEHQVCSHELATRLAALGVQQEGVFWWVDRKVTYTAGRASHAPRQGGIAAFTSAELGEMLPDEVIMPAKNGKPQTHWLRFGRYRGAGKRFWCAYPGGTARTNLEERAPTEADARAQLLIYLLEHQLLSPTALR*
Ga0134081_101088392	3300014150	Grasslands Soil	MFAAPARCEAKQMIPFEQQVCSRELAQRLEALGVRQESVFWWVDRKLTYTGGLASHAQLQGGVAAFTVAELGEMLPDELIIPSKNGKPYTHWLRFGRYRGAGQRFWCAYPGGNARTPLEERAHTEADARAKLLISVLEHQLLSPTGLCS*
Ga0137418_100410234	3300015241	Vadose Zone Soil	MIPLEQQVCSRELAQRLEALGVRQESVFWWVDRKLTYTGGLAAFTVAELGEMLPDELTIPAKNGKPHTHWLRFGRYRGAGTRFWCAYPGGTARTNFEERAYTEADARAKLLIALLEHKLLSPTGFRS*
Ga0137409_114552102	3300015245	Vadose Zone Soil	MMPLEKQVCSRELAKRLEALGVRQESVFWWGERTLTYPGGLASQAQLQGGISAFTVAELGEMLPDEINIPSKHGKPRSYNHWLRFGRYRVSVHRCWCAYPGGNARTNLAERANTEADARA
Ga0132258_101463864	3300015371	Arabidopsis Rhizosphere	MMPIEHQVCSHELATRLAALGVRQESVFWWVDRKVTYTAGRASHAPRQGGIAAFTAAELGEMLPDEIIIPAKNGTPQTHWLRFGRYRGAGQRFWCAYPGGTARTNLEERAPTEADARAQLLIYLLEHQLLSPTTLRS*
Ga0132256_1009126962	3300015372	Arabidopsis Rhizosphere	MMPIEHQVCSHELATRLAALGVRQESVFWWVDRKVTYTAGRASHAPRQGGIAAFTAAELGEMLPDEIIIPAKNGKPQTHWLRFGRYRGAGKRYWCAYPGGTARTNLEERAPTEADARAQLLIYLLEHHLPPSLGGRSSSRTVRE*
Ga0132256_1034665001	3300015372	Arabidopsis Rhizosphere	MMPVEHQVCSHELAQRLAELGVRQESVFWWADRKLTYTGSRASHAPRQGGIAAFTVAELGEMLPDEVIIASKNGKPHTHWLRFGRYRGAGDRFWCAYPGGTARTNLEERAHNEADARAKLLIYLLEHHLLSSTGLHA*
Ga0163161_111868851	3300017792	Switchgrass Rhizosphere	VCSHELAKRLEELGVRQESVFWWVDRRLTYTGGRASHVQLQGGIAAFTVAELGEMLPDEITIPSKNGKPHTHWLRFGRYRGAGNRFWCAYPGGTARTNLEERAHTEADARAKLLIYLLEHHLLSSTGLHA
Ga0184617_11433871	3300018066	Groundwater Sediment	MIPLEQQVCSRELAQRLAELGVRQESVFWWVDRTLTYTGGRASHAQRQGGIAAFTVAELGAMLPDDITIPSKNGKPHTHWLRFGRYRGAGHRFWCAYPGGTARTNLEERAHTEADARAKLLIALLEHKLLSPTGLRS
Ga0066662_122162801	3300018468	Grasslands Soil	CPAQRPGAPHTLATDYLIEINSFAEHAKCEANQMMPLEQQVCSHELAKRLAELGVRQESVFWWIDRKLTYTGGRASHAPLQGGIAAFTVAELGEMLPDDITIPSKNGKPHTHWLRFGRYRVAGHRFWCAYPGGTTRTNLEERAHTEDDARAKLLIYLLEHHLLSPTGLNA
Ga0180110_12297591	3300019208	Groundwater Sediment	MIPPEQQVCSRELAKRLAELGVRQESVFWWVDRKLLYTGGHPSHAQLQGGIAAFTVAELGEMLPDDITIPSKNGKPYMHWLRFGRYRGAGQRFWCAYPGGTARTNIEERAHTEADA
Ga0180119_11070791	3300019228	Groundwater Sediment	MIPPEQQVCSRELAKRLAELGVRQESVFWWVDRKLLYTGGRPSHAQLQGGIAAFTVAELGEMLPDDITIPSKNRKPYMHWLRFGRYRGAGQRFWCAYPGGTARTNIEERAHTEADARAKLLVYL
Ga0207712_101158191	3300025961	Switchgrass Rhizosphere	MMPVEHQVCSHELAQRLAALGVRQESVFWWIDGKLTYTGGRASHAPRHGGIAAFTVAELGEMLPDEVIIPAKNGKPQTHWLRFGRYRGVGQRFWCAYPGGTTRTTLEERARTEADARAQLLIYLLEHQLLSPTALR
Ga0209845_10048794	3300027324	Groundwater Sand	QESVFWWVDRKLMYTGGRASHAQLQGGIAAFTVAELGEMLPDDITIPSKNGKPHTHWLRFGRYRGAGHRFWCAYPGGTARTNLEERADTEADARAKLLIYLLEHKLLSPTELHS
Ga0209899_10188952	3300027490	Groundwater Sand	MIPLEQQVCSRELAKRLEELGVRQESVFWWVDRKLMYTGGRASHAQLQGGIAAFTVAELGEMLPDDITIPSKNGKPHTHWLRFGRYRGAGHRFWCAYPGGTARTNLEERAHTEADARAKLLISLLEHHLLSATELRS
Ga0209180_101177822	3300027846	Vadose Zone Soil	VIEAALQDAAWVCAKPATCEVNPMMPLEQQVCSHELATRLAELGVQQESVFWWVDRTLTYTGGRASHAPRQGGIAAFTVAELGEMLPDDIIIPSKNGKPHTHWLRFGRYRGAGNRFWCAYPGGTVRTNLEERAHTEADARAQLLISLLEHQLLSPTELRS
Ga0209814_100401273	3300027873	Populus Rhizosphere	MMPLEQQVCSHELATRLAELGVRQESVFWWVDGKLTYTGGRASHAPRHAGIAAFTVAELGTMLPDEVIIPAKNGKPHTHWLRFGRYRGAGNRFWCAYPGGTARTTLEERAHTEADARAQLLISLLEHHLLPSLGGRS
Ga0209465_100672732	3300027874	Tropical Forest Soil	MMPIEHQVCSHELATRLAALGVQQEGVFWWVDRKVTYTAGRASHAPRQGGIAAFTSAELGEMLPDEVIIPAKNGKPQTHWLRFGRYRGAGKRFWCAYPGGTARTNLEERAPTEADARAQLLIYLLEHQLLSPTALR
Ga0209481_100797711	3300027880	Populus Rhizosphere	MMPVEQQVCSHELAKRLAELGVRQESVFWWVDGKLTYTGGRASHAPRHAGIAAFTVAELGTMLPDEVIIPAKNGKPHTHWLRFGRYRGAGNRFWCAYPGGTARTTLEERAHTEADARAQLLISLLEHHL
Ga0207428_101679572	3300027907	Populus Rhizosphere	MMPIEHQVCSHELAARLAELGVRQESAFWWVDRKLTYTGGRASHTPRHGGIAAFTAAELGEMLPDEVIITSKNGKPHTHWLRFGRYRGAGQRFWCAYPGGTARTTLEERAHTEADARAQLLIYLLEHHLLSAMDLRS
Ga0209382_103718712	3300027909	Populus Rhizosphere	MMSVEHQVCSHALAQRLAALGVRQESVFWWVDGKVTYTGGRASHAPGHGGIAAFTAAELGAMLPDEIIIPAKNGKPQTHWLRFGRYRGAGQRFWCAYPGGTARTHLEERAPTEAGARAQLLIYLLEHQLLAPTALRS
Ga0209382_105831711	3300027909	Populus Rhizosphere	VCSHELAKRLAELSVGQESVFWWVDGKVTYTGGRATHAPMHGGIAAFTAAELGEMLPDEITIPAKNGKPYTHWLRFGRYRGAGHRFWCTYPGGTAQTTLEERAHTEADTRAQLLISLLGGCELSAL
Ga0209860_10534552	3300027949	Groundwater Sand	MIPLEQQVCSRELAKRLEELGVRQESVFWWVDRKLMYTGGRASHALLQGGIAAFTVAELGEMLPDDITIPSKNGKPHTHWLRFGRYRGAGQRFWCAYPGGTAQTTLEERAHTE
Ga0209889_10346962	3300027952	Groundwater Sand	MIPLEQQVCSRELAKRLEELGVRQESVFWWVDRKLMYTGGRASHAQLQGGIAAFTVAELGEMLPDDITIPSKNGKPHTHWLRFGRYRGAGHRFWCAYPGGTARTNLEERADTEADARAKLLELFRNK
Ga0209859_10817212	3300027954	Groundwater Sand	QESVFWWVDRKLTYTGGRASHAPRQGGIAAFTAAELGEMLPDEVVIPSKNGKPHTHWLRFGRYRGAGHRFWCAYPGGTARTNLEERADTEADARAQLLIYLLEHHLLSSTELHA
Ga0247828_101017572	3300028587	Soil	VPTKGEVHPMMPVEHQVCSHALAKRLAELGVRQERVFWWVDGKVTSTGGRASHVPLHGGIAAFTVAELGEMLPDEVVIPAKNGKPHTHWLRFGRSRGAGQRFWCAYPGGTARTTLEERAHTEVDARAQLLISLLEHQLLSPTARRS
Ga0307308_104240691	3300028884	Soil	MIPLEQQVCSHELAQRLAELGVRQESVFWWVDRTLTYTGGRASHAQRQGGIAAFTVAELGAMLPDDITIPSKNGTPHTHWLRFGRYRGAGHRFWCAYPGGTTRTNLEERAPTEADARAKLLIYVLEHHLLSSTELHA
Ga0247648_11925401	3300030574	Soil	ELATRLAELGVQQESVFWWVDRKLTYTGRRAAHAPLQGGIAAFTVAELGEMMPDDITIPSKNGKPYIHWLRFGRYRGAGQRFWCAYPGGTARTNLEERANTEADARAKLLIYVLEHHLLSSTGLHA
Ga0308198_10133691	3300030904	Soil	MIPLEQQVCSHELAQRLAELGVRQESVFWWVDRTLTYTGGRASHAQRQGGIAAFTVAELGAMLPDDITIPSKNGTPHTHWLRFGRYRGAGHRFWCAYPGGTTRTNLEERAPTEADARAKLLIYILEHHLLSSTELHT
Ga0308197_104847401	3300031093	Soil	AALQDAAWVCAKPATCEVNPMMPLEHQVCSHELATRLAELGVQQESVFWWVDRTLTYTGGRASHAQRQGGIAAFTVAELGAMLPDDITIPSKNGTPHTHWLRFGRYRGAGHRFWCAYPGGTAQTTLEERAHTEADARAQLLISLLEHQLLSSTELRS
Ga0308199_11827131	3300031094	Soil	RLAELGVQQESVFWWIDRKVTYTGGRASHAPLQGGIAAFTVAELGEMLPDDIIIPSKNGKPHTHWLRFGRYRGAGHRFWCAYPGGTARTNLEERAHTEADARAQLLISLLEHQLLSSTELRS
Ga0308187_100328441	3300031114	Soil	QESVFWWVDKKLMYTGGRASDVALQGGIAAFTGAELGEMLPDEITIPSKNGKPHTHWLRFGRYRGAGHRFWCAYPGGTARTNLEERANTEADARAKLLIYLLEHKLLSPTELHS
Ga0308187_100604191	3300031114	Soil	MMPLEQQVCSHELAKRLAELGVQQESVFWWIDRKLTYTGGRASHAPLQGGIAAFTVAELGEMLPDDIIIPSKNGKLHTHWLRFGRYRGAGKRCWCAYPGGTARTNLEERAHTEADARAQLLIYLLEHQ
Ga0310886_105727221	3300031562	Soil	HQVCSRELAQRLAELGVRQESVFWWVDRKLMYTGGRASHAPLQGGIAAFTVAELGAMLPDDIIIPAKNGKPHTHWLRFGRYRGAGDRFWCAYPGGTARTNLEERAHTEADARAKLLIYLLEHQLLSSTGLHA
Ga0307473_114619971	3300031820	Hardwood Forest Soil	MMPVEHQVCSHALAKRLAELGARQESVFWWVDGKVTYTGGRASHAPLHGGIAAFTVAEPGEMLPDEVVIPAKNGKPHTHWLRVGRYRGAGQRFWCAYPGGTARTNLEERAPTEADARAQLLIYLLEHHLLSAMDLRS
Ga0310906_102398333	3300032013	Soil	VCSRELAKRLEELGVRQESVFWWVDRTLTYTGGRASHAPLQGGGAAFTVAELGAMLPDDITIPSKNGKPRAHTHWLRFGRYRVAGDRFWCAYPGGTARTNLEERAPTEADARAKLLIYLLEHQLLSSTGLHA
Ga0307470_118481891	3300032174	Hardwood Forest Soil	QESVFWWVDRKVMYTGGRASHAPLQGGIAAFTVAELGEMLPDEITIPSKNGTPHTHWLRFGRYRGAGHRFWCAYPGGTARTTLEERAHTEADARAQLFISLLEHQLLSPTALR
Ga0307471_1032407212	3300032180	Hardwood Forest Soil	RQESVFWWVDRKLTYTGGLTSQVQLRGGIAAFTVAELGAMLPDEINIPAKTGKPRAYNHWLRFGRYRVAGEACWCAYPGGTDRTNLETRANTEADARAKMLVYLLENHLLAPANL
Ga0307472_1009812871	3300032205	Hardwood Forest Soil	QESVFWWVDGKVTYTAGRASHAPRQGGIAAFTAAELGEMLPDDIIISAKNGKPQTHWLRFGRYRGAGQRFWCAYPGGTARTTLEERAHTEADARAQLLIYLLEHQLLSPTARRS
Ga0247830_108784282	3300033551	Soil	MMPVEQQVCSHELAKRLAELGVQQESVFWWIDRKLTYTGGRTSHAPRHGGIAAFTAAELGEMLPDEIIIPAKNGKPHTHWLRFGRYRGAGNRFWCAYPGGTARTNLEERAHTEADA
Ga0314789_023953_15_407	3300034480	Soil	VCSRGLAKRLEELGVRQESAFWWIDRKLTYTGGRSSPAQLKGGVAAFTVAELGEMLPDEITIPSKNGKLHTHWLRFGRYRVAGDRFWCAYPGGTARTNLEERAPTEADARAKLLIYLLEHQLLSSTGLHT
Ga0314782_207180_2_352	3300034661	Soil	MIPPEQQVCSRELAKRLAELGVRQESVFWWVDRKLLYTGGRPSHAQLQGGIAAFTVAELGEMLPDDITIPSKNGKPYMHWLRFGRYRGAGQRFWCAYPGGTARTNLEERAHTEADDR
Ga0314793_149735_145_525	3300034668	Soil	MIPPEQQVCSRELAKRLAELGVRQESVFWWVDRKLLYTGGRPSHAQLQGGIAAFTVAELGEMLPDDITIPSKNGKPYMHWLRFGRYRGAGQRFWCAYPGGTARTTIEERAYTEADARAKLLIYLLEH

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069012

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences