Metagenome / Metatranscriptome Family F069009

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F069009
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	53 residues
Representative Sequence	MPLETFQLGEPVEHRGIVVTPLFPRRDPVAEYVTLDEALPRGFRVDETSD
Number of Associated Samples	118
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	97.58 %
% of genes near scaffold ends (potentially truncated)	97.58 %
% of genes from short scaffolds (< 2000 bps)	91.13 %
Associated GOLD sequencing projects	113
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.49

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (94.355 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil (12.097 % of family members)
Environment Ontology (ENVO)	Unclassified (29.839 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (34.677 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 5.13% β-sheet: 15.38% Coil/Unstructured: 79.49%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.49
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.49
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF08281	Sigma70_r4_2	7.26
PF01402	RHH_1	5.65
PF02631	RecX	4.03
PF12697	Abhydrolase_6	3.23
PF04014	MazE_antitoxin	3.23
PF04542	Sigma70_r2	2.42
PF01850	PIN	2.42
PF04545	Sigma70_r4	2.42
PF00248	Aldo_ket_red	1.61
PF00723	Glyco_hydro_15	1.61
PF02604	PhdYeFM_antitox	1.61
PF00551	Formyl_trans_N	0.81
PF13649	Methyltransf_25	0.81
PF06172	Cupin_5	0.81
PF02661	Fic	0.81
PF11799	IMS_C	0.81
PF00271	Helicase_C	0.81
PF06966	DUF1295	0.81
PF07992	Pyr_redox_2	0.81
PF01927	Mut7-C	0.81
PF03050	DDE_Tnp_IS66	0.81
PF13847	Methyltransf_31	0.81
PF00149	Metallophos	0.81
PF13561	adh_short_C2	0.81
PF13470	PIN_3	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG2137	SOS response regulatory protein OraA/RecX, interacts with RecA	Posttranslational modification, protein turnover, chaperones [O]	4.03
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	2.42
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	2.42
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	2.42
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	2.42
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	1.61
COG3387	Glucoamylase (glucan-1,4-alpha-glucosidase), GH15 family	Carbohydrate transport and metabolism [G]	1.61
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	1.61
COG1656	Uncharacterized conserved protein, contains PIN-related Mut7-C RNAse domain	General function prediction only [R]	0.81
COG2020	Protein-S-isoprenylcysteine O-methyltransferase Ste14	Posttranslational modification, protein turnover, chaperones [O]	0.81
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.81
COG3542	Predicted sugar epimerase, cupin superfamily	General function prediction only [R]	0.81
COG3752	Steroid 5-alpha reductase family enzyme	General function prediction only [R]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	94.35 %
Unclassified	root	N/A	5.65 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	94.35 %
Unclassified	root	N/A	5.65 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	94.35 %
Unclassified	root	N/A	5.65 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	82.26 %
Unclassified	root	N/A	5.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.61 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.81 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	79.84 %
Unclassified	root	N/A	5.65 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.61 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.81 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	60.48 %
Unclassified	root	N/A	5.65 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	3.23 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.61 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.81 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	58.87 %
Unclassified	root	N/A	5.65 %
Gaiellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales	3.23 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.61 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	58.87 %
Unclassified	root	N/A	5.65 %
Gaiellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae	3.23 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.61 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	58.87 %
Unclassified	root	N/A	5.65 %
Gaiella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella	3.23 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.61 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	58.87 %
Unclassified	root	N/A	5.65 %
Gaiella occulta	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	3.23 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.61 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2088090009\|LWAnN_F624WLL02I0PQK	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300002244\|JGI24742J22300_10070277	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	652	Open in IMG/M
3300003996\|Ga0055467_10111730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	787	Open in IMG/M
3300003998\|Ga0055472_10077860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	893	Open in IMG/M
3300004114\|Ga0062593_101298241	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	771	Open in IMG/M
3300004114\|Ga0062593_102775342	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	559	Open in IMG/M
3300004480\|Ga0062592_102508143	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300005339\|Ga0070660_100051490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3171	Open in IMG/M
3300005344\|Ga0070661_101662271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300005347\|Ga0070668_100305411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1335	Open in IMG/M
3300005356\|Ga0070674_102052982	Not Available	521	Open in IMG/M
3300005364\|Ga0070673_100576721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1024	Open in IMG/M
3300005367\|Ga0070667_100362077	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1315	Open in IMG/M
3300005406\|Ga0070703_10064072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1210	Open in IMG/M
3300005457\|Ga0070662_101809386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	528	Open in IMG/M
3300005530\|Ga0070679_101784377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	564	Open in IMG/M
3300005530\|Ga0070679_101964998	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	534	Open in IMG/M
3300005545\|Ga0070695_100764454	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	772	Open in IMG/M
3300005563\|Ga0068855_101759851	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	630	Open in IMG/M
3300005564\|Ga0070664_100025246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4923	Open in IMG/M
3300005564\|Ga0070664_100508776	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1111	Open in IMG/M
3300005578\|Ga0068854_100938144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	763	Open in IMG/M
3300005616\|Ga0068852_100312699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1523	Open in IMG/M
3300005618\|Ga0068864_102663523	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300005840\|Ga0068870_10177574	All Organisms → cellular organisms → Bacteria	1276	Open in IMG/M
3300005873\|Ga0075287_1064620	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	517	Open in IMG/M
3300006059\|Ga0075017_100928183	All Organisms → cellular organisms → Bacteria → Terrabacteria group	676	Open in IMG/M
3300006196\|Ga0075422_10553834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	528	Open in IMG/M
3300006574\|Ga0074056_11784326	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300006894\|Ga0079215_10497472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	759	Open in IMG/M
3300006904\|Ga0075424_101488751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	718	Open in IMG/M
3300007520\|Ga0105054_10616696	All Organisms → cellular organisms → Bacteria	839	Open in IMG/M
3300009100\|Ga0075418_11206494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	820	Open in IMG/M
3300009167\|Ga0113563_11243871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	868	Open in IMG/M
3300009174\|Ga0105241_11755708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	604	Open in IMG/M
3300009545\|Ga0105237_11163749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	778	Open in IMG/M
3300009821\|Ga0105064_1125719	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300009836\|Ga0105068_1075610	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	634	Open in IMG/M
3300010041\|Ga0126312_10154893	All Organisms → cellular organisms → Bacteria	1591	Open in IMG/M
3300010399\|Ga0134127_10563595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1162	Open in IMG/M
3300010399\|Ga0134127_10711212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1046	Open in IMG/M
3300010403\|Ga0134123_13209481	Not Available	526	Open in IMG/M
3300011119\|Ga0105246_10425437	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1109	Open in IMG/M
3300012045\|Ga0136623_10479580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	524	Open in IMG/M
3300012186\|Ga0136620_10097757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1354	Open in IMG/M
3300012527\|Ga0136633_1003310	All Organisms → cellular organisms → Bacteria	10659	Open in IMG/M
3300012680\|Ga0136612_10650051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	534	Open in IMG/M
3300012684\|Ga0136614_10540336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	836	Open in IMG/M
3300012905\|Ga0157296_10056859	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	942	Open in IMG/M
3300012908\|Ga0157286_10104226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	838	Open in IMG/M
3300012916\|Ga0157310_10152422	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	800	Open in IMG/M
3300012958\|Ga0164299_10221651	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1109	Open in IMG/M
3300012985\|Ga0164308_11650352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	593	Open in IMG/M
3300012986\|Ga0164304_10591618	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	826	Open in IMG/M
3300012988\|Ga0164306_11288742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	617	Open in IMG/M
3300012989\|Ga0164305_10236024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1311	Open in IMG/M
3300013102\|Ga0157371_11134236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	601	Open in IMG/M
3300013772\|Ga0120158_10033699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3850	Open in IMG/M
3300014263\|Ga0075324_1148754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	538	Open in IMG/M
3300014310\|Ga0075331_1088191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	717	Open in IMG/M
3300015371\|Ga0132258_10939035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2185	Open in IMG/M
3300016445\|Ga0182038_11580378	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	590	Open in IMG/M
3300017695\|Ga0180121_10400171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	533	Open in IMG/M
3300017789\|Ga0136617_10331180	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1244	Open in IMG/M
3300017789\|Ga0136617_10401129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1106	Open in IMG/M
3300017938\|Ga0187854_10330853	All Organisms → cellular organisms → Bacteria	647	Open in IMG/M
3300018082\|Ga0184639_10654964	All Organisms → cellular organisms → Bacteria → Terrabacteria group	508	Open in IMG/M
3300018466\|Ga0190268_10770404	Not Available	722	Open in IMG/M
3300020081\|Ga0206354_11674631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	863	Open in IMG/M
3300020213\|Ga0163152_10143393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1388	Open in IMG/M
3300022892\|Ga0247753_1048060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	544	Open in IMG/M
3300022893\|Ga0247787_1050461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	613	Open in IMG/M
3300023070\|Ga0247755_1055170	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	818	Open in IMG/M
3300023073\|Ga0247744_1072308	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	589	Open in IMG/M
3300023077\|Ga0247802_1017187	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	996	Open in IMG/M
3300023102\|Ga0247754_1114130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	658	Open in IMG/M
3300023266\|Ga0247789_1006237	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1808	Open in IMG/M
3300025155\|Ga0209320_10336450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	620	Open in IMG/M
3300025164\|Ga0209521_10068759	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2335	Open in IMG/M
3300025319\|Ga0209520_10094893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1902	Open in IMG/M
3300025326\|Ga0209342_10671436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	834	Open in IMG/M
3300025567\|Ga0210076_1023835	All Organisms → cellular organisms → Bacteria	1307	Open in IMG/M
3300025792\|Ga0210143_1033787	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	894	Open in IMG/M
3300025792\|Ga0210143_1056386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	700	Open in IMG/M
3300025908\|Ga0207643_10334821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	948	Open in IMG/M
3300025909\|Ga0207705_10112322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2014	Open in IMG/M
3300025933\|Ga0207706_10245281	All Organisms → cellular organisms → Bacteria → Proteobacteria	1565	Open in IMG/M
3300025940\|Ga0207691_10130214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2223	Open in IMG/M
3300025941\|Ga0207711_10564793	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1061	Open in IMG/M
3300025944\|Ga0207661_10133114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2132	Open in IMG/M
3300025961\|Ga0207712_10088973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2269	Open in IMG/M
3300025986\|Ga0207658_10337269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1309	Open in IMG/M
3300026071\|Ga0208537_1048714	Not Available	506	Open in IMG/M
3300026089\|Ga0207648_11984895	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	543	Open in IMG/M
3300026121\|Ga0207683_10088668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2753	Open in IMG/M
3300027560\|Ga0207981_1007483	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1934	Open in IMG/M
3300028587\|Ga0247828_11017514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300028592\|Ga0247822_10844736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	748	Open in IMG/M
3300028596\|Ga0247821_10071454	All Organisms → cellular organisms → Bacteria → Proteobacteria	1917	Open in IMG/M
3300028608\|Ga0247819_11113372	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	505	Open in IMG/M
3300028733\|Ga0302261_1082862	Not Available	755	Open in IMG/M
3300028802\|Ga0307503_10059630	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1492	Open in IMG/M
3300030006\|Ga0299907_10870175	Not Available	673	Open in IMG/M
3300030336\|Ga0247826_10208795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1342	Open in IMG/M
3300030943\|Ga0311366_11492292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	580	Open in IMG/M
3300031547\|Ga0310887_10593687	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	678	Open in IMG/M
3300031576\|Ga0247727_10183269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1951	Open in IMG/M
3300031726\|Ga0302321_101398648	Not Available	805	Open in IMG/M
3300031847\|Ga0310907_10236026	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	892	Open in IMG/M
3300031858\|Ga0310892_10331174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	970	Open in IMG/M
3300031913\|Ga0310891_10208448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	660	Open in IMG/M
3300031949\|Ga0214473_12315917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	514	Open in IMG/M
3300031997\|Ga0315278_10331772	All Organisms → cellular organisms → Bacteria	1572	Open in IMG/M
3300032000\|Ga0310903_10146093	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1061	Open in IMG/M
3300032012\|Ga0310902_11143633	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300032017\|Ga0310899_10675462	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	523	Open in IMG/M
3300032163\|Ga0315281_10571832	All Organisms → cellular organisms → Bacteria	1193	Open in IMG/M
3300032179\|Ga0310889_10030006	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1987	Open in IMG/M
3300032275\|Ga0315270_11165949	All Organisms → cellular organisms → Bacteria	513	Open in IMG/M
3300032397\|Ga0315287_11634537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	723	Open in IMG/M
3300033550\|Ga0247829_11390499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	580	Open in IMG/M
3300033551\|Ga0247830_11046940	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	651	Open in IMG/M
3300034151\|Ga0364935_0305305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	525	Open in IMG/M
3300034177\|Ga0364932_0348228	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	559	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	74.19%
Host-Associated	Host-Associated	25.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.84%
Plants	Host-Associated → Plants	25.81%
Aquatic	Environmental → Aquatic	19.35%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	49.19%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.74%
Freshwater	Environmental → Aquatic → Freshwater	13.71%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.06%
Marine	Environmental → Aquatic → Marine	4.03%
Peat	Environmental → Terrestrial → Peat	2.42%
Sediment	Environmental → Aquatic → Sediment	1.61%
Floodplain	Environmental → Terrestrial → Floodplain	1.61%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.81%
Cave	Environmental → Terrestrial → Cave	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.52%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.48%
Ice	Environmental → Aquatic → Freshwater → Ice	7.26%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.26%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.45%
Loam	Environmental → Terrestrial → Soil → Loam	4.84%
Lake	Environmental → Aquatic → Freshwater → Lake	4.03%
Wetlands	Environmental → Aquatic → Marine → Wetlands	4.03%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.23%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.42%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.61%
Sand	Environmental → Terrestrial → Soil → Sand	1.61%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.61%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.81%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.81%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.81%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	16.94%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	12.10%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.48%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	8.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.26%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	6.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.45%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	4.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.03%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	3.23%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.23%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.42%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.61%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.61%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.61%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.81%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.81%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.81%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.81%
Glacial Lake	Environmental → Aquatic → Freshwater → Ice → Glacial Lake	0.81%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.81%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.81%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.81%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.81%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	12.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.87%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	6.45%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	5.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.84%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	4.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.03%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	3.23%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.23%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.42%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.42%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.42%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	2.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.42%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.61%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.61%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.61%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Sediment	0.81%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	0.81%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	0.81%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.81%
Freshwater	Environmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater	0.81%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.81%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.81%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.81%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.81%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.81%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.81%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2088090009	Freshwater sediment microbial communities from Lake Washington, Seattle, for methane and nitrogen Cycles - SIP 13C-methane anaerobic+nitrate	Environmental	Open in IMG/M
3300002244	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1	Host-Associated	Open in IMG/M
3300003996	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D2	Environmental	Open in IMG/M
3300003998	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005873	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_0N_301	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007520	Freshwater microbial communities from Lake Bonney liftoff mats and glacier meltwater in Antarctica - BON-02 (megahit assembly)	Environmental	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009821	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30	Environmental	Open in IMG/M
3300009836	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012045	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ449 (21.06)	Environmental	Open in IMG/M
3300012186	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ416 (21.06)	Environmental	Open in IMG/M
3300012527	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ83 (22.06)	Environmental	Open in IMG/M
3300012680	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ224A (23.06)	Environmental	Open in IMG/M
3300012684	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ279 (21.06)	Environmental	Open in IMG/M
3300012905	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S013-104B-2	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013772	Permafrost microbial communities from Nunavut, Canada - A10_80_0.25M	Environmental	Open in IMG/M
3300014263	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D1	Environmental	Open in IMG/M
3300014310	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_TuleA_D1	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017695	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ540 (21.06) (version 2)	Environmental	Open in IMG/M
3300017789	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ322 (21.06)	Environmental	Open in IMG/M
3300017938	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_150	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020213	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP8.IB-2	Environmental	Open in IMG/M
3300022892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S169-409R-5	Environmental	Open in IMG/M
3300022893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S126-311R-4	Environmental	Open in IMG/M
3300023070	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L096-311B-4	Environmental	Open in IMG/M
3300023073	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S154-409C-5	Environmental	Open in IMG/M
3300023077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S076-202R-6	Environmental	Open in IMG/M
3300023102	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S184-509B-5	Environmental	Open in IMG/M
3300023266	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S220-509R-4	Environmental	Open in IMG/M
3300025155	Soil microbial communities from Rifle, Colorado, USA - sediment 13ft 4	Environmental	Open in IMG/M
3300025164	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 4	Environmental	Open in IMG/M
3300025319	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 1	Environmental	Open in IMG/M
3300025326	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2 (SPAdes)	Environmental	Open in IMG/M
3300025567	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025792	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2 (SPAdes)	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026071	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_TuleA_D1 (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027560	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)	Environmental	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300028733	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Fen_E2_4	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030943	III_Fen_N2 coassembly	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031576	Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032275	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_bottom	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300033551	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day5	Environmental	Open in IMG/M
3300034151	Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17	Environmental	Open in IMG/M
3300034177	Sediment microbial communities from East River floodplain, Colorado, United States - 17_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
LWAnN_08403610	2088090009	Freshwater Sediment	VEHRGIVVTPLFPALDPVAGYITLDEALPRGLTITETSDAGSVPELAVINPL
JGI24742J22300_100702772	3300002244	Corn, Switchgrass And Miscanthus Rhizosphere	MPHETFQLGETVEHRGIVVTPLFPLRDPVAEYVTLDEALPRGFRVDEASNAGTVPELV
Ga0055467_101117301	3300003996	Natural And Restored Wetlands	MLENLIQIGEALEHRGIVVAPLFPRRDPVAAYLALDEALA
Ga0055472_100778601	3300003998	Natural And Restored Wetlands	MLESLIQLGEPVEHRGIVVHLVPRRDPVAAYITVDEALPRGLRIAETSESGTVPELVVESPLAERVL
Ga0062593_1012982411	3300004114	Soil	MPLETFQLGEPVEHRGIVVTPLFPSRDPVAEYVTLDEALPRGFRVDETSDAGSVPELVV
Ga0062593_1027753422	3300004114	Soil	MPHETFQLGETVEHRGIVVTPLFPLRDPVAEYVTLDEALPRG
Ga0062592_1025081431	3300004480	Soil	MPHETFQLGETVEHRGIVVTPLFPLRDPVAEYVTLDEALPRGFRVDEASNAGTVPEL
Ga0070660_1000514905	3300005339	Corn Rhizosphere	MPHETFQLGETVEHRGIVVTPLFPLRDPVAEYVTLDEALPRGFRVDE
Ga0070661_1016622711	3300005344	Corn Rhizosphere	MPLETFQLGEPVEHRGIVVTPLFPRRDPVAEYVTLDEALPRGFRVDETSD
Ga0070668_1003054113	3300005347	Switchgrass Rhizosphere	MPHETFQLGETVEHRGIVVTPLFPRRDPVAAYITLDEALPRGLRITETSDSGSVPELLVE
Ga0070674_1020529821	3300005356	Miscanthus Rhizosphere	MHLTTHAFQAGEPVEHRGIVVTSLFPTVDPVAAYISLDEALPAGLRITETSDAGSVPELAVVN
Ga0070673_1005767213	3300005364	Switchgrass Rhizosphere	MTLDTFQLGEPVEHRGIVVTPLFPRQDPVAVYITLDEALPIGF
Ga0070667_1003620771	3300005367	Switchgrass Rhizosphere	MPHETFQLGETVEHRGIVVTPLFPRRDPVAEYVTLDEALPRGFRVDEASDAGTVPELVVHNPTDARVLLYD
Ga0070703_100640721	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MPHETFQLGETVEHRGIVVTPLFPRRDPVAEYVTLDEALPRGFRVDEAPDAGTVPELVVHNPTD
Ga0070662_1018093861	3300005457	Corn Rhizosphere	MPLDTFQLGEPVEHRGIVVTPLFPRRDPVAEYVTLDEALPRGFRVDE
Ga0070679_1017843772	3300005530	Corn Rhizosphere	MPHETFQLGETVEHRGIVVTPLFPLRDPVAEYVTLDEALPRGF
Ga0070679_1019649982	3300005530	Corn Rhizosphere	VYTTTLPFQVGDPVEHRGVVVAPLFPLRDQRARYVTLDAALDRGLSITETSEAGDVPE
Ga0070695_1007644542	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MPHETFQLGETVEHRGIVVTPLFPRRDPVAEYVTLDEALPRGFRVDEASDA
Ga0068855_1017598512	3300005563	Corn Rhizosphere	MPHETFQLGETVEHRGIVVTPLFPLRDPVAEYVTLDEALPRGFRVDEASNAGTVPELVVHNPTD
Ga0070664_1000252461	3300005564	Corn Rhizosphere	MPHETFQLGETVEHRGIVVTPLFPRRDPVAEYVTLDEA
Ga0070664_1005087761	3300005564	Corn Rhizosphere	MPIAAFQPGETVEHRGIVVAPLFPRRDPVADYVTLDEALPRGFRVDEASDAGTVPELVVHNPTDA
Ga0068854_1009381442	3300005578	Corn Rhizosphere	MPHETFQLGETVEHRGIVVTPLFPRRDPVAEYVTLDEALPRGFRVDEASDAGTVPELVVHNPTDA
Ga0068852_1003126991	3300005616	Corn Rhizosphere	MPHETFQLGETVEHRGIVVTPLFPRRDPVAEYVTLDEALPRGFRVDEASDAGTVPELVVHNPTD
Ga0068864_1026635231	3300005618	Switchgrass Rhizosphere	LHTTLLPFQVGDPVEHRGIVVAPLFPLRDPRARYLMLDAALARGLSITETSEAGDVPE
Ga0068870_101775741	3300005840	Miscanthus Rhizosphere	MTLDTFQLGEPVEHRGIVVTPLFPRQDPVTAYITLDEALPHGFHIDETSDSGSVPELVVE
Ga0075287_10646201	3300005873	Rice Paddy Soil	LTPLTLPFQVGDPVEHRGIVLAPLFPLRDPVARYATLDDALARGLTITETSDAG
Ga0075017_1009281831	3300006059	Watersheds	MTLTALDVQLGDPVEHRGIVVTPLFPARDPVAGYLTLDEALPQGLEIRETSEAG
Ga0075422_105538342	3300006196	Populus Rhizosphere	MTLDTFQIGEPVEHRGIVVTPLFPRRDPVAEYVTLDEA
Ga0074056_117843262	3300006574	Soil	MFRDLAQIGEPVEHRGIVVAPLFPHRDPVAAYVTLDEALGAGLRIREIDEAGAVPELVVE
Ga0079215_104974721	3300006894	Agricultural Soil	MTLDAFQLGEPVEHRGIVVAPLFPRRDPVAAYVTLDEALPRGLRITETS
Ga0075424_1014887511	3300006904	Populus Rhizosphere	MPHETFQLGETVEHRGIVVTPLFPRRDPVAEYVTLDEALP
Ga0105054_106166961	3300007520	Freshwater	LITSTSTFRLGDPVEHRGIVVTPLFPTGDAVADYITLDEALPRGLVITETTD
Ga0075418_112064942	3300009100	Populus Rhizosphere	MPLDTFQLGEPVEHRGIVVTPLFPRRDPVSAYITLDDALPRGLRITETSASGSVPELLVE
Ga0113563_112438713	3300009167	Freshwater Wetlands	MTPTTLIFQLGDPVEHRGIVVTPLFPTRDPVACYITLDEALPRGLSITETSDAGSVPELA
Ga0105241_117557081	3300009174	Corn Rhizosphere	MPHETFQLGETVEHRGIVVTPLFPLRDPVAEYVTLDEALPRGFRVDEASNAGTVPE
Ga0105237_111637491	3300009545	Corn Rhizosphere	MPHETFQLGETVEHRGIVVTPLFPLRDPVSEYVTLDEALPRGLRVDEASNAGTVPEL
Ga0105064_11257192	3300009821	Groundwater Sand	MTRETLIQRGEPVENRGIVLTPLFPRRRPRADYITLDEALGLG
Ga0105068_10756102	3300009836	Groundwater Sand	MTTLTAPLQLGEPVEHRGIVVAPLFPRTQPCARYVTLDEALPLGFRVTEVSDQGSVP*
Ga0126312_101548931	3300010041	Serpentine Soil	MKLEMQSLLQVGEPAQHRGIVVTPLFPRTQPRAEYVTLDEALPLGFRVTGVDDAGVVPEL
Ga0134127_105635953	3300010399	Terrestrial Soil	MPHETFQLGETVEHRGIVVTPLFPRRDPVAEYVTLDEALPRGFRVDEASDAGTVPELVVH
Ga0134127_107112121	3300010399	Terrestrial Soil	VDSSRTKEDAMPLDTFQLGEPVEHRGIVVTPLFPRRDPVAEYVTLDEALPRGFRV
Ga0134123_132094811	3300010403	Terrestrial Soil	MPDTTHVFQVGDPLEHRGIVVTPLFPTRNPAARYIALDDALPVGLHITEISEAGIVPELAVVNPLDDGVLVY
Ga0105246_104254371	3300011119	Miscanthus Rhizosphere	MPHETFQLGETVEHRGIVVTPLFPRRDPVAEYVTLDEALPRGFRVDEASDAGTVPELVVHNPTDARVL
Ga0136623_104795801	3300012045	Polar Desert Sand	MFRDLYQLGDCMLHRGILVAPLFPRRDPVAEYITLDEALAGGL
Ga0136620_100977573	3300012186	Polar Desert Sand	MIENLFQIGELAEHRGIVIAPLFPRADPVATYLTLDEALAGG
Ga0136633_10033101	3300012527	Polar Desert Sand	MIENLFQTGETVEHRGIVVAPLFPRTDPVAAYLTLDEALAGGLRIAETSEA
Ga0136612_106500512	3300012680	Polar Desert Sand	VILDRVQIGDRVEHRGIVVTPLFPRSDPVAQYITLDEALPQGLRITEIDEAGTVPELIVE
Ga0136614_105403362	3300012684	Polar Desert Sand	MIENLFQTGETVEHRGIVVAPLFPRTDPVAAYVTLDEALAGGLRIRETSEAGSVPELLVE
Ga0157296_100568593	3300012905	Soil	MPLETFQLGEPVEHRGIVVTPLFPRCDPVVEYATLDEALPRGFRVDETSDAGTVPELTVH
Ga0157286_101042263	3300012908	Soil	MPLETFQLGEPVEHRGIVVTPLFPGRDPVAEYVTLDEAL
Ga0157310_101524221	3300012916	Soil	LSTTTLPFQIGDPVEHRGIVLAPLFPRRNPVARYVTLDEGLARGLSLTETSDA
Ga0164299_102216511	3300012958	Soil	MPHETFQLGETVEHRGIVVTPLFPRRDPVAEYVTLDEALPRGFRVDEASDAGTVPELVVHNPTDAR
Ga0164308_116503522	3300012985	Soil	MLKNLTHFQLGETVEHRGVLIVPLFPTRDPACSYLTLDEALPRGLA
Ga0164304_105916181	3300012986	Soil	MPHETFQLGETVEHRGIVVTPLFPRQDPVTAYITLDEALPRGFHIDETSDSGSVPEL
Ga0164306_112887421	3300012988	Soil	MTLHTFQLGEPVEHRGIVVTPLFPRRDPVAAYITLDEALPRGLRITETSDSGS
Ga0164305_102360241	3300012989	Soil	MTLDTFQLGEPVEHRGIVVTPLFPRRDPVAAYITLDEALPRG
Ga0157371_111342361	3300013102	Corn Rhizosphere	VDSSRTKEDAMPLDTFQLGEPVEHRGIVVTPLFPRRDPVAEYVTLDEALPRGFRVDEAS
Ga0120158_100336995	3300013772	Permafrost	MQTKLNETIQLGDPVEHQGIAIAPLFPRREPVAPYLTLEEAIPLGLA*
Ga0075324_11487541	3300014263	Natural And Restored Wetlands	MSLDTFQLGEPVEHRGIVVTPLFPHRDPVAAYVTLDEALPRGLRITETSDSGT
Ga0075331_10881912	3300014310	Natural And Restored Wetlands	MIRHLIQIGEPVAHRGIVVAPLFPRHDPVAAYVTLDEALADGLRVQ*
Ga0132258_109390351	3300015371	Arabidopsis Rhizosphere	MPIDAFQPGETVEHRGIVVTPLFPRRDPVAAYVTLDEALPRGFRV
Ga0182038_115803782	3300016445	Soil	MTKTLDFPFQIGDPVEHRGIVIAPLFPTRDPACAYITLDEALSRGLSITETSESGTVPELAV
Ga0180121_104001712	3300017695	Polar Desert Sand	MQIAIQSGEPREHRGVVVTPLFPTRDPVASYVTLDEALPRGLRISETS
Ga0136617_103311804	3300017789	Polar Desert Sand	MTLDIFQLGEPVEHRGIVVTPLFPRRDPVAEYVTLDEALPRGLRITETS
Ga0136617_104011294	3300017789	Polar Desert Sand	MTLDTFQLGEPVEHRGIVVTPLFPRRDPVASYITLDEALPRGLRITETSDSGTVPE
Ga0187854_103308532	3300017938	Peatland	MPLDSTIQLGEPVSHRGVVVAPLFPRLTPAAAYVTLDEALPLGFRVTEVDAAGLVPELTVHNPLDRNVLL
Ga0184639_106549641	3300018082	Groundwater Sediment	MTTLRSTFQLGELVSHRGIVVAPLFPRLAPRAAYVTLDEALERGFRI
Ga0190268_107704042	3300018466	Soil	MLENSIQLGDPVEHRGIVVTPIFPRRSPAAAYTTLVDALPLGLAIDEVSESGSVPELAVH
Ga0206354_116746311	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	MPLETFQLGEPVEHRGIVVTPLFPRRDPVAEYVTL
Ga0163152_101433931	3300020213	Freshwater Microbial Mat	MTATTLTFQLGEPAEHRGIVVTPLFPARDPVAGYITLDEALPR
Ga0247753_10480601	3300022892	Soil	MPHETFQLGETVEHRGIVVTPLFPLRDPVAEYVTLDEALPRGFRVDEASNAG
Ga0247787_10504611	3300022893	Soil	MPLETFQLGEPVEHRGIVVTPLFPSRDPVAEYVTLDEALPRGFR
Ga0247755_10551702	3300023070	Plant Litter	MPHETFQLGETVEHRGIVVTPLFPLRDPVAEYVTLDEALPRGFRVD
Ga0247744_10723082	3300023073	Soil	MPHETFQLGETVEHRGIVVTPLFPLRDPVAEYVTSTRRS
Ga0247802_10171873	3300023077	Soil	MPHETFQLGETVEHRGIVVTPLFPLRDPVAEYVTLDEALPRGFRVDETSDAGTVPEL
Ga0247754_11141301	3300023102	Soil	MPHETFQLGETVEHRGIVVTPLFPLRDPVAEYVTLDEALPRGFRVDEASNAGTVPELLVHNPTDKRVL
Ga0247789_10062371	3300023266	Soil	MPHETFQLGETVEHRGIVVTPLFPLRDPVAEYVTLDEALPRGFRVDEASNAGTVPELVVHNPTDKRVLLYD
Ga0209320_103364501	3300025155	Soil	MIEKLFQIGGHAEHRGIVVAPLYPRRDPVAVYLALDEALARGLRIRETSE
Ga0209521_100687593	3300025164	Soil	MTTLTAPFQLGDLVSHRGAVVAPLFPRLAPRASYVTLDEALARGFRIREVSES
Ga0209520_100948936	3300025319	Soil	MIEKLFQIGGHAEHRGIVVAPLYPRRDPVAVYLTLDEALA
Ga0209342_106714361	3300025326	Soil	MITNLIQIGDAAEHRGIVVAPLFPRRDPVAGYITLDKALASG
Ga0210076_10238351	3300025567	Natural And Restored Wetlands	MSLDTFQHGEPVEHRGIVVTPLFPRRDPVAAYVTLDEALPRGLRITETSDSGTVPELHV
Ga0210143_10337873	3300025792	Natural And Restored Wetlands	MIENLQIGEPVEHRGIVVAPLFPRRDPVAAYLALDEALARGLRIAETSE
Ga0210143_10563861	3300025792	Natural And Restored Wetlands	MLENLIQIGEALEHRGIVVAPLFPRRDPVAAYLALDEALARGLRI
Ga0207643_103348211	3300025908	Miscanthus Rhizosphere	MPLETFQLGEPVEHRGIVVTPLFPSRDPVAEYVTLDEALPRGFRVDEASDAGTVPE
Ga0207705_101123224	3300025909	Corn Rhizosphere	MPHETFQLGETVEHRGIVVTPLFPLRDPVAEYVTLDEALPRGLRVDEASNAGT
Ga0207706_102452811	3300025933	Corn Rhizosphere	LTTTTFPFQLGDPVEHRGVVIAPLFPLRDPRARYIALDAALARGLTITETSEAGDVPELTVA
Ga0207691_101302141	3300025940	Miscanthus Rhizosphere	MTLDTFQLGEPVEHRGIVVTPLFPRQDPVTAYITLDEAL
Ga0207711_105647933	3300025941	Switchgrass Rhizosphere	MPHETFQLGETVEHRGIVVTPLFPRRDPVAEYVTLDEALPRGFRVDE
Ga0207661_101331141	3300025944	Corn Rhizosphere	MPHETFQLGETVEHRGIVVTPLFPRRDPVAEYVTLDEALPRGL
Ga0207712_100889731	3300025961	Switchgrass Rhizosphere	MPHETFQLGETVEHRGIVVTPLFPRRDPVAEYVTLDEALPRG
Ga0207658_103372693	3300025986	Switchgrass Rhizosphere	MPHETFQLGETVEHRGIVVTPLFPRRDPVAEYVTLDEALPRGFRVDEASDAGTVPEL
Ga0208537_10487143	3300026071	Natural And Restored Wetlands	MIRHLIQIGEPVAHRGIVVAPLFPRHDPVAAYVTLDEALADGL
Ga0207648_119848951	3300026089	Miscanthus Rhizosphere	MTLDTFQLGEPVEHRGIVVTPLFPRRDPVAGYITLDEALPRGLRITETSDS
Ga0207683_100886685	3300026121	Miscanthus Rhizosphere	MPHETFQLGETVEHRGIVVTPLFPLRDPVAEYVTLDEALPRGFRVDEASKAGTVPELVVHNPTDKRV
Ga0207981_10074836	3300027560	Soil	MFRDLAQIGEPVEHRGIVVAPLFPHRDPVAAYVTLDEALGAGLRIREID
Ga0247828_110175141	3300028587	Soil	MPLDTFQLGEPVEHRGIVVTPLFPRRDPVTEYVTLDEALPRGFRVDEASDAGTVPE
Ga0247822_108447361	3300028592	Soil	MPHETFQLGETVEHRGIVVTPLFPRRDPVAEYVTLDEALPRGFRVDEASDAGTVPELVVHNPTDARVLLY
Ga0247821_100714541	3300028596	Soil	LTTTTFPFQLGDPVGHRGIVIAPLFPLRDPRARYIALDAALARGLTITETSEAGDVPELT
Ga0247819_111133722	3300028608	Soil	VYTTTLPFQVGDPVEHRGVVVAPLFPLRDQRARYVTLDAALDRGLSITETSEASS
Ga0302261_10828622	3300028733	Fen	MTSTVTPFQLGHPVEHRGIVVTPLFPALDPRARYVTLDEALPRGLTITETSDAGSVPELQ
Ga0307503_100596303	3300028802	Soil	MTLDTFQLGEPVEHRGIVVTPLFPRQDPVAVYITLDEALPRGFHIDETSDSGSVPELVVE
Ga0299907_108701753	3300030006	Soil	VLENTVQIGEPVEHRGIVVAPLFPRRDPVASYLTLDEALAGGLRIREVDESGSVP
Ga0247826_102087953	3300030336	Soil	MLKEIQPGEPTTHRGVVIVPLFPRRDPVASYITLDEALPLGLQIAETSDAGS
Ga0311366_114922922	3300030943	Fen	MTAITPTFQLGDPVEHRGIVITPLFPSRDPVAGYITLDEALPRGLRIGETSDAGSVP
Ga0310887_105936872	3300031547	Soil	MTLDTFQLGEPVEHRGIVVTSLFPRRDPVTAYITLDEALPRGLRITETSDSGSVPEL
Ga0247727_101832691	3300031576	Biofilm	MRKESQMVENLQLGEAVEHRGIVLTPLFPRRDPVAEYLTLDEALPRGFASA
Ga0302321_1013986482	3300031726	Fen	MTPTSTPFQLGDPVTYRGIVVTPVFPALDPRASYITLDEALPRGLIITETSDAGSVPELAVVNPL
Ga0310907_102360261	3300031847	Soil	MPHETFQLGETVEHRGIVVTPLFPRRDPVAEYVTLDEALPRGFRVDEASDAGTVPELVAHNPTD
Ga0310892_103311741	3300031858	Soil	MIENLIQVGEPVEHRGIVVAPLFPRRDPVVAYVTLDEALAGGLRIRETSES
Ga0310891_102084481	3300031913	Soil	MPHETFQLGETVEHRGIVVTPLFPRRDPVAEYVTLDEALPRGFRVDEASDAGTVPELVVHNPTDARVLLYDG
Ga0214473_123159171	3300031949	Soil	MIDNIQIGEAVEHRGIVITPLFPRRDPVAAYITLDEALPQGLRIREVDEAGT
Ga0315278_103317723	3300031997	Sediment	MTLATLTFQLGDPVEHRGIVVTPLFPACDPVAGYITLDEALPRGLTISETSDAGSVPELA
Ga0310903_101460931	3300032000	Soil	MPHETFQLGETVEHRGIVVTPLFPRRDPVAEYVTLDEALPRGFRVDEASDAGTVPELVVHNPTAAR
Ga0310902_111436331	3300032012	Soil	MPHETFQLGETVEHRGIVVTPLFPRRDPVAEYVTLDEALPRGFRVDEA
Ga0310899_106754621	3300032017	Soil	MPHETFQLGETVEHRGIVVTPLFPRRDPVAAYVTLDEALPRGLRITETSDAG
Ga0315281_105718323	3300032163	Sediment	MTLTTLTFQLGDPVEHRGIVITPLFPACDPVAGYITLDEALPRGLAISE
Ga0310889_100300061	3300032179	Soil	MPHETFQLGETVEHRGIVVTPLFPRRDPVAAYVTLDEALPRGLRITETS
Ga0315270_111659491	3300032275	Sediment	MTLATLTFQLGDAVEHRGIVVTPLFPGRDPVAGYITLDEALPRGLTIRETSDAGSVPELE
Ga0315287_116345371	3300032397	Sediment	MTASTLTFQLGDAVEHRGIVITPLFPARDPVAGYITLDEALPRGLTISET
Ga0247829_113904992	3300033550	Soil	MTLDTFQLGEPVEHRGIVVTPLFPLRDPVAAYITLDEALPRGLQ
Ga0247830_110469401	3300033551	Soil	MPLDTFQLGEPVEHRGIVVTPLFPRRDPVATYITLDEALPRGLRI
Ga0364935_0305305_365_523	3300034151	Sediment	MIRDLFQIGERAEHRGIVVIPLFPRTDPVAEYLTLGEALAGGLRIRETSESGS
Ga0364932_0348228_409_558	3300034177	Sediment	MIHDLFQIGEPAEHRGIVIAPLYPRQDPVAAYVTLDEALAGGLRIRETSE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F069009

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences