Metagenome / Metatranscriptome Family F068960

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F068960
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	116 residues
Representative Sequence	VKRFRSLRLRSFMMPLLLAALALRVLIPDVMSGQDMSGMSVKSSMCSAVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAIQVPLLPEQVSQLPESPLPRAQSARAPPHA
Number of Associated Samples	95
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	53.23 %
% of genes near scaffold ends (potentially truncated)	31.45 %
% of genes from short scaffolds (< 2000 bps)	78.23 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.22

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (75.806 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (30.645 % of family members)
Environment Ontology (ENVO)	Unclassified (52.419 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (57.258 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 16.22% β-sheet: 0.00% Coil/Unstructured: 83.78%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.22
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.22
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF04314	PCuAC	38.71
PF01618	MotA_ExbB	28.23
PF00005	ABC_tran	6.45
PF07715	Plug	4.84
PF03441	FAD_binding_7	1.61
PF00528	BPD_transp_1	1.61
PF11066	DUF2867	0.81
PF04389	Peptidase_M28	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG2847	Copper(I)-binding protein	Inorganic ion transport and metabolism [P]	38.71
COG0415	Deoxyribodipyrimidine photolyase	Replication, recombination and repair [L]	1.61

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	75.81 %
Unclassified	root	N/A	24.19 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	75.81 %
Unclassified	root	N/A	24.19 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	75.81 %
Unclassified	root	N/A	24.19 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	68.55 %
Unclassified	root	N/A	24.19 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.61 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	30.65 %
Unclassified	root	N/A	24.19 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.61 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.81 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.19 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	1.61 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.81 %
Alteromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales	0.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.19 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.61 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	0.81 %
Alteromonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae	0.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.19 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.61 %
unclassified Bryobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae	0.81 %
Alteromonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae	0.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.19 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1.61 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	0.81 %
Alteromonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae	0.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_101973531	Not Available	1047	Open in IMG/M
3300000956\|JGI10216J12902_110598190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	671	Open in IMG/M
3300004157\|Ga0062590_100191137	All Organisms → cellular organisms → Bacteria → Proteobacteria	1466	Open in IMG/M
3300004480\|Ga0062592_101118173	Not Available	730	Open in IMG/M
3300004643\|Ga0062591_100105948	All Organisms → cellular organisms → Bacteria → Proteobacteria	1834	Open in IMG/M
3300005333\|Ga0070677_10002472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5914	Open in IMG/M
3300005333\|Ga0070677_10219060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	928	Open in IMG/M
3300005334\|Ga0068869_100087639	All Organisms → cellular organisms → Bacteria	2335	Open in IMG/M
3300005344\|Ga0070661_101941336	Not Available	501	Open in IMG/M
3300005347\|Ga0070668_100048224	All Organisms → cellular organisms → Bacteria → Proteobacteria	3275	Open in IMG/M
3300005354\|Ga0070675_101152015	Not Available	713	Open in IMG/M
3300005354\|Ga0070675_101258383	Not Available	681	Open in IMG/M
3300005367\|Ga0070667_100080540	All Organisms → cellular organisms → Bacteria	2785	Open in IMG/M
3300005438\|Ga0070701_10407352	Not Available	863	Open in IMG/M
3300005456\|Ga0070678_100036658	All Organisms → cellular organisms → Bacteria → Proteobacteria	3434	Open in IMG/M
3300005459\|Ga0068867_101157226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	709	Open in IMG/M
3300005466\|Ga0070685_10052869	All Organisms → cellular organisms → Bacteria → Proteobacteria	2351	Open in IMG/M
3300005539\|Ga0068853_101720376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	608	Open in IMG/M
3300005543\|Ga0070672_100086180	All Organisms → cellular organisms → Bacteria → Proteobacteria	2525	Open in IMG/M
3300005543\|Ga0070672_101542597	Not Available	595	Open in IMG/M
3300005548\|Ga0070665_100761032	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	981	Open in IMG/M
3300005718\|Ga0068866_10542151	Not Available	776	Open in IMG/M
3300005719\|Ga0068861_101026229	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	789	Open in IMG/M
3300005719\|Ga0068861_101109355	Not Available	761	Open in IMG/M
3300005841\|Ga0068863_100049042	All Organisms → cellular organisms → Bacteria → Proteobacteria	4003	Open in IMG/M
3300005841\|Ga0068863_101000845	All Organisms → cellular organisms → Bacteria → Proteobacteria	838	Open in IMG/M
3300006046\|Ga0066652_100187445	All Organisms → cellular organisms → Bacteria → Proteobacteria	1769	Open in IMG/M
3300006237\|Ga0097621_100725359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Alteromonadales → Alteromonadaceae	917	Open in IMG/M
3300006581\|Ga0074048_13391289	All Organisms → cellular organisms → Bacteria → Proteobacteria	1493	Open in IMG/M
3300006881\|Ga0068865_100228109	All Organisms → cellular organisms → Bacteria → Proteobacteria	1460	Open in IMG/M
3300006881\|Ga0068865_101792119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	555	Open in IMG/M
3300009094\|Ga0111539_11180174	Not Available	889	Open in IMG/M
3300009094\|Ga0111539_12338784	Not Available	620	Open in IMG/M
3300009148\|Ga0105243_10410500	All Organisms → cellular organisms → Bacteria → Proteobacteria	1260	Open in IMG/M
3300009156\|Ga0111538_11015851	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1049	Open in IMG/M
3300009527\|Ga0114942_1301550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	614	Open in IMG/M
3300009553\|Ga0105249_10050292	All Organisms → cellular organisms → Bacteria	3800	Open in IMG/M
3300010397\|Ga0134124_10523617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1150	Open in IMG/M
3300010403\|Ga0134123_11305677	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	761	Open in IMG/M
3300011399\|Ga0137466_1051144	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	639	Open in IMG/M
3300011438\|Ga0137451_1016865	All Organisms → cellular organisms → Bacteria	2108	Open in IMG/M
3300012883\|Ga0157281_1019487	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	847	Open in IMG/M
3300012892\|Ga0157294_10132936	Not Available	674	Open in IMG/M
3300012893\|Ga0157284_10114908	Not Available	722	Open in IMG/M
3300012895\|Ga0157309_10367388	Not Available	505	Open in IMG/M
3300012900\|Ga0157292_10065664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1011	Open in IMG/M
3300012900\|Ga0157292_10274372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	595	Open in IMG/M
3300012901\|Ga0157288_10011515	All Organisms → cellular organisms → Bacteria → Proteobacteria	1490	Open in IMG/M
3300012902\|Ga0157291_10009386	All Organisms → cellular organisms → Bacteria	1678	Open in IMG/M
3300012903\|Ga0157289_10054919	All Organisms → cellular organisms → Bacteria → Proteobacteria	1022	Open in IMG/M
3300012904\|Ga0157282_10284704	Not Available	575	Open in IMG/M
3300012906\|Ga0157295_10196101	Not Available	640	Open in IMG/M
3300012908\|Ga0157286_10454987	Not Available	509	Open in IMG/M
3300012909\|Ga0157290_10047474	All Organisms → cellular organisms → Bacteria → Proteobacteria	1093	Open in IMG/M
3300012914\|Ga0157297_10072139	All Organisms → cellular organisms → Bacteria → Proteobacteria	967	Open in IMG/M
3300012914\|Ga0157297_10471724	Not Available	521	Open in IMG/M
3300012915\|Ga0157302_10177045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	747	Open in IMG/M
3300012916\|Ga0157310_10062345	All Organisms → cellular organisms → Bacteria → Proteobacteria	1111	Open in IMG/M
3300012985\|Ga0164308_10326507	All Organisms → cellular organisms → Bacteria → Proteobacteria	1229	Open in IMG/M
3300013306\|Ga0163162_10220447	All Organisms → cellular organisms → Bacteria → Proteobacteria	2027	Open in IMG/M
3300013306\|Ga0163162_11154124	All Organisms → cellular organisms → Bacteria → Proteobacteria	878	Open in IMG/M
3300014326\|Ga0157380_10043449	All Organisms → cellular organisms → Bacteria	3519	Open in IMG/M
3300014326\|Ga0157380_10769372	Not Available	976	Open in IMG/M
3300014969\|Ga0157376_10015305	All Organisms → cellular organisms → Bacteria → Proteobacteria	5792	Open in IMG/M
3300014969\|Ga0157376_10162176	All Organisms → cellular organisms → Bacteria → Proteobacteria	2028	Open in IMG/M
3300015200\|Ga0173480_10074445	Not Available	1588	Open in IMG/M
3300015201\|Ga0173478_10064715	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1245	Open in IMG/M
3300017792\|Ga0163161_10154521	All Organisms → cellular organisms → Bacteria → Proteobacteria	1746	Open in IMG/M
3300017792\|Ga0163161_10609459	All Organisms → cellular organisms → Bacteria → Proteobacteria	901	Open in IMG/M
3300017792\|Ga0163161_11986738	Not Available	517	Open in IMG/M
3300018073\|Ga0184624_10023347	All Organisms → cellular organisms → Bacteria → Proteobacteria	2330	Open in IMG/M
3300018082\|Ga0184639_10106786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1480	Open in IMG/M
3300018083\|Ga0184628_10078281	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1685	Open in IMG/M
3300018469\|Ga0190270_10046705	All Organisms → cellular organisms → Bacteria → Proteobacteria	2974	Open in IMG/M
3300018469\|Ga0190270_10183764	All Organisms → cellular organisms → Bacteria → Proteobacteria	1745	Open in IMG/M
3300018476\|Ga0190274_10249266	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1608	Open in IMG/M
3300018476\|Ga0190274_12386898	Not Available	626	Open in IMG/M
3300018476\|Ga0190274_12580788	Not Available	605	Open in IMG/M
3300018481\|Ga0190271_10000209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	29087	Open in IMG/M
3300018481\|Ga0190271_11974263	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	693	Open in IMG/M
3300018481\|Ga0190271_12102764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	672	Open in IMG/M
3300019362\|Ga0173479_10070889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1209	Open in IMG/M
3300020027\|Ga0193752_1029931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2500	Open in IMG/M
3300022903\|Ga0247774_1080961	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	763	Open in IMG/M
3300022915\|Ga0247790_10063033	Not Available	870	Open in IMG/M
3300023064\|Ga0247801_1012793	All Organisms → cellular organisms → Bacteria → Proteobacteria	1064	Open in IMG/M
3300023073\|Ga0247744_1008946	All Organisms → cellular organisms → Bacteria → Proteobacteria	1293	Open in IMG/M
3300023261\|Ga0247796_1009385	All Organisms → cellular organisms → Bacteria → Proteobacteria	1383	Open in IMG/M
3300023263\|Ga0247800_1017832	All Organisms → cellular organisms → Bacteria → Proteobacteria	1136	Open in IMG/M
3300023270\|Ga0247784_1122662	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	670	Open in IMG/M
3300025315\|Ga0207697_10374033	Not Available	633	Open in IMG/M
3300025893\|Ga0207682_10007686	All Organisms → cellular organisms → Bacteria → Proteobacteria	4289	Open in IMG/M
3300025899\|Ga0207642_10396806	Not Available	825	Open in IMG/M
3300025908\|Ga0207643_10765223	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	625	Open in IMG/M
3300025918\|Ga0207662_10156942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1451	Open in IMG/M
3300025923\|Ga0207681_10435547	All Organisms → cellular organisms → Bacteria → Proteobacteria	1064	Open in IMG/M
3300025930\|Ga0207701_10250193	All Organisms → cellular organisms → Bacteria → Proteobacteria	1547	Open in IMG/M
3300025930\|Ga0207701_10403075	All Organisms → cellular organisms → Bacteria → Proteobacteria	1178	Open in IMG/M
3300025934\|Ga0207686_10101240	All Organisms → cellular organisms → Bacteria → Proteobacteria	1924	Open in IMG/M
3300025937\|Ga0207669_10055482	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2399	Open in IMG/M
3300025937\|Ga0207669_10097900	All Organisms → cellular organisms → Bacteria → Proteobacteria	1930	Open in IMG/M
3300025937\|Ga0207669_10139082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1682	Open in IMG/M
3300025938\|Ga0207704_11048721	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	691	Open in IMG/M
3300025938\|Ga0207704_11130987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	666	Open in IMG/M
3300025940\|Ga0207691_10136617	All Organisms → cellular organisms → Bacteria → Proteobacteria	2162	Open in IMG/M
3300025941\|Ga0207711_10405364	All Organisms → cellular organisms → Bacteria → Proteobacteria	1267	Open in IMG/M
3300025960\|Ga0207651_10859991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	806	Open in IMG/M
3300025972\|Ga0207668_10276986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1374	Open in IMG/M
3300025986\|Ga0207658_11151976	Not Available	709	Open in IMG/M
3300025986\|Ga0207658_12005005	Not Available	527	Open in IMG/M
3300026041\|Ga0207639_11061058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	759	Open in IMG/M
3300026088\|Ga0207641_10048961	All Organisms → cellular organisms → Bacteria → Proteobacteria	3569	Open in IMG/M
3300026088\|Ga0207641_10778007	All Organisms → cellular organisms → Bacteria → Proteobacteria	946	Open in IMG/M
3300026089\|Ga0207648_10089317	All Organisms → cellular organisms → Bacteria → Proteobacteria	2692	Open in IMG/M
3300026121\|Ga0207683_10039403	All Organisms → cellular organisms → Bacteria → Proteobacteria	4122	Open in IMG/M
3300028802\|Ga0307503_10683218	Not Available	575	Open in IMG/M
3300031184\|Ga0307499_10002775	All Organisms → cellular organisms → Bacteria → Proteobacteria	4191	Open in IMG/M
3300031366\|Ga0307506_10042366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1283	Open in IMG/M
3300031366\|Ga0307506_10050905	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1205	Open in IMG/M
3300031366\|Ga0307506_10427376	Not Available	548	Open in IMG/M
3300032017\|Ga0310899_10405919	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	654	Open in IMG/M
3300032144\|Ga0315910_10033163	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3788	Open in IMG/M
3300032157\|Ga0315912_10002829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	17953	Open in IMG/M
3300032157\|Ga0315912_10178639	All Organisms → cellular organisms → Bacteria → Proteobacteria	1664	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	53.23%
Host-Associated	Host-Associated	46.77%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	48.39%
Plants	Host-Associated → Plants	46.77%
Aquatic	Environmental → Aquatic	4.84%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	46.77%
Rhizosphere	Host-Associated → Plants → Rhizosphere	25.00%
Rhizoplane	Host-Associated → Plants → Rhizoplane	20.97%
Sediment	Environmental → Aquatic → Sediment	4.03%
Plant Litter	Environmental → Terrestrial → Plant Litter	1.61%
Freshwater	Environmental → Aquatic → Freshwater	0.81%
Roots	Host-Associated → Plants → Roots	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.35%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	19.35%
Soil	Host-Associated → Plants → Rhizosphere → Soil	16.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.03%
Loam	Environmental → Terrestrial → Soil → Loam	2.42%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	1.61%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.61%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.81%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.06%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	19.35%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	16.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.87%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.03%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.42%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	1.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.61%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.81%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.81%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	30.65%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	8.87%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	8.06%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	6.45%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.03%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	4.03%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.42%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.42%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.61%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.61%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	1.61%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	1.61%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	1.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.61%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009527	Groundwater microbial communities from Cold Creek, Nevada to study Microbial Dark Matter (Phase II) - Lower Cold Creek	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011399	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT842_2	Environmental	Open in IMG/M
3300011438	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT500_2	Environmental	Open in IMG/M
3300012883	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1	Environmental	Open in IMG/M
3300012892	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1	Environmental	Open in IMG/M
3300012893	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S059-202B-1	Environmental	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012900	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S179-409R-1	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300020027	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1c1	Environmental	Open in IMG/M
3300022903	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L001-104B-6	Environmental	Open in IMG/M
3300022915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4	Environmental	Open in IMG/M
3300023064	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S001-104B-6	Environmental	Open in IMG/M
3300023073	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S154-409C-5	Environmental	Open in IMG/M
3300023261	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S166-409R-6	Environmental	Open in IMG/M
3300023263	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S092-311B-6	Environmental	Open in IMG/M
3300023270	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L169-409R-5	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300031184	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S	Environmental	Open in IMG/M
3300031366	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_S	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1019735311	3300000956	Soil	LMPLLLAALVLRVLIPTDVMPSEGMSLKSSLCSAVPLPGRSELIEIPDASPKPHCDRCLLNPPFEAPYASLDFGFARTLQIPLLPEQSSQLPEFPLVRAQSARAPPRA*
JGI10216J12902_1105981901	3300000956	Soil	VKLLRSLRFRSNLMPLLLAALVLRVLIPTDVMPSEGMSLKSSLCSVAPGRSERIEIPDASPKPHCDRCLLSPPFEAPYASLDFGFARTLKIPLLPDQSSQLPEFPLVRAQSARAPPRA*
Ga0062590_1001911372	3300004157	Soil	VKRFRSLRLRSFTMPLLLAALALRVLIPDVMSGQDMSGISVKSSICSAVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAIQVPLLPEQVSQLPESPLPRAQSARAPPHA
Ga0062592_1011181731	3300004480	Soil	LAALALRVLIPDVMSGQDMSGMSVKSSMCSAVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAVQVPLLPEQVSQSPESPLARAQSARAPPHA*
Ga0062591_1001059482	3300004643	Soil	VKRFRSLRLRSFMMPLLLAALALRVLIPDVMSGQDMSGMSVKSSMCSAVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAIQVPLLPEQVSQLPESPLPRAQSARAPPHA
Ga0070677_100024723	3300005333	Miscanthus Rhizosphere	VKRFRSLRLRSFTMPLLLAALALRVLIPDVMSGQDMSGISGISVKSSMCSAVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAIQVPLLPEQVSQLPESPLPRAQSARAPPHA*
Ga0070677_102190601	3300005333	Miscanthus Rhizosphere	MPLLLAALALRVLIPDVMTGEAISGMTLTSSMCSSVPGRSELIEIPGEAPKPHCERCLLTPPFEAPYALLTPALRPAVQVPLLPEQVSQIPESPLARAQSARAPPHA*
Ga0068869_1000876392	3300005334	Miscanthus Rhizosphere	MRAVTRFRSLRLRSFMMPLLLAALALRVLIPDVMSDPDMSGMSVNSSMCSAVPGRSELIRIPGDAPKPHCERCLLTPPFEAPYALLTPIFGPALRVPLLPERFSQTLESPLARAQSARAPPRA*
Ga0070661_1019413361	3300005344	Corn Rhizosphere	MRGVTRFRSLRLRSFTMPLLLVALALRVLIPTDVMPEHGVSGMMVQSSMCSATPGRSEVIEIPADAAKPHCERCLLTPPFEAPYALLTPALRPVVQVPLLPEQVSQIHVSPLSRAQSARAPP
Ga0070668_1000482243	3300005347	Switchgrass Rhizosphere	MMPLLLAALALRVLIPDVMSGPDMSGMSVKSSMCSTVPGRSELIEIPDDAPKSHCERCLLTPPFEAPYALLTPVFGTAVQVPLLPEQVSQSPESPLVRAQSARAPPHA*
Ga0070675_1011520151	3300005354	Miscanthus Rhizosphere	MRAVTRFRSLRLRSFTMPLLLVALALRVLIPTDVMPEHGVSGMMVQSSMCSATPGRSEVIEIPADAAKPHCERCLLTPPFEAPYALLTPALRPVVQVPLLPEQVSQIHVSPLSRAQSARAPPHA*
Ga0070675_1012583832	3300005354	Miscanthus Rhizosphere	LALRVLIPDVMTGEAISGMTLTSSMCSSVPGRSELIEIPGEAPKPHCERCLLTPPFEAPYALLTPALRPAVQVPLLPEQVSQIPESPLARAQSARAPPHA*
Ga0070667_1000805403	3300005367	Switchgrass Rhizosphere	MRAVTRFRSLRLRSFMMPLLLAALALRVLIPDVMSDPDMNGMSVKSSMCSAVPRRSELIRIPGDAPKPHCERCLLTPPFEAPYALLTPIFGPALRVPLLPEQFSQTLESPLARAQSARAPPRA*
Ga0070701_104073522	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MRAVTRFRSLRLRSFTMPLLLVALALRVLIPTDVMPEHGVSGIPVQSSMCSATPGRSELIGIPADAAKPHCERCLLTPPFEAPYALLTPALRPVVQVPLLPEQVSQIHVSPLSRAQSARAPPHA*
Ga0070678_1000366583	3300005456	Miscanthus Rhizosphere	VIRFRSLRLRSFMMPLLLAALALRVLIPDVMSGQDMSGISVKSSMCSAVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAVQVPLLPEQVSQLPESPLPRAQSARAPPHA
Ga0068867_1011572261	3300005459	Miscanthus Rhizosphere	VKRFRSLRLRSFTMPLLLAALALRVLIPDVMSVQDMSGISGISVKSSMCSAVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAIQVPLLPEQVSQLPESPLPRAQSARAPPHA*
Ga0070685_100528692	3300005466	Switchgrass Rhizosphere	VKRFRSLRLRSFTMPLLLAALALRVLIPDVMSGQDMSGMSVKSSMCSAVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAIQVPLLPEQVSQLPESPLPRAQSARAPPHA
Ga0068853_1017203761	3300005539	Corn Rhizosphere	MRAVTRFRSLRLRSFMMPLLLAALALRVLIPDVMSGQDMSGISVKSSICSAVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAIQVPLLPEQVSQLPE
Ga0070672_1000861803	3300005543	Miscanthus Rhizosphere	VKRFRSLRLRSFTMPLLLAALALRVLIPDVMSGQDMSGISVKSSMCSAVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAIQVPLLPEQVSQLPESPLPRAQSARAPPHA
Ga0070672_1015425971	3300005543	Miscanthus Rhizosphere	MRAVTRFRSLRLRSFTMPLLLVALALRVLIPTDVMPEHGVSGMMVQSSMCSATPGRSELIGIPADAAKPHCERCLLTPPFEAPYALLTPALRPVVQVPLLPEQVSQIHVSPLSRAQSARAPPHA*
Ga0070665_1007610321	3300005548	Switchgrass Rhizosphere	MMPLLLAALALRVLIPDVMSGQDMSGISVKSSICSAVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAIQVPLLPEQVSQLPESPLPRAQSARAPPHA*
Ga0068866_105421512	3300005718	Miscanthus Rhizosphere	MRAVTRFRSLRLRSFMMPLLLAALALRVLIPDVMSDPDMSGMSVNSSMCSAVPGRSELIRIPGDAPKPHCERCLLTPPFEAPYALLTPIFGPALHVPLLPEQFSQTLESPLARAQSARAPPRA*
Ga0068861_1010262291	3300005719	Switchgrass Rhizosphere	MRAVTRFRSLRLRSFMMPLLLAALALRVLIPDVMSDPDMSGMSVKSSMCSAVPGRSELIRIPGDAPKPHCERCLLTPPFEAPYALLTPIFGPALRVPLLPEQFSQTLESPLVRAQSARAPPRA*
Ga0068861_1011093552	3300005719	Switchgrass Rhizosphere	RFRSLRLRSFMMPLLLAALALRVLIPDVMSGQDMSGISVKSSICSAVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAIQVPLLPEQVSQLPESPLPRAQSARAPPHA*
Ga0068863_1000490423	3300005841	Switchgrass Rhizosphere	MRAVTRFRSLRLRSFMMPLLLAALALRVLIPDVMSDPDMSGMSVNSSMCSAVPGRSELIRIPGDAPKPHCERCLLTPPFEAPYALLTPIFGPALRVPLLPEQFSQTLESPLVRAQSARAPPRA*
Ga0068863_1010008451	3300005841	Switchgrass Rhizosphere	RSLRLRSFMMPLLLAALALRVLIPDVMSDPDMNGMSVKSSMCSAVPRRSELIRIPGDAPKPHCERCLLTPPFEAPYALLTPIFGPALRVPLLPEQFSQTLESPLARAQSARAPPRA*
Ga0066652_1001874453	3300006046	Soil	MRAVTRFRSLRLRSIMMPLLLAALALRVLIPDVMSDPDMSGMSVKSSMCSAVPGRSELIRIPGDAPKPHCERCLLTPPFEAPFALLTPIFGRALRVPLLPEQFSQTLESPLARAQSARAPPHA*
Ga0097621_1007253592	3300006237	Miscanthus Rhizosphere	VKRFRSLRLRSFTMPLLLAALALRVLIPDVMSGQDMSGISVKSSICSAVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAIQVPLLPEQVSQLPEFPLPRAQSARAPPHA
Ga0074048_133912892	3300006581	Soil	MRAVTRFRSLRLRSFMMPLLLAALALRVLIPDVMSDPDMSGMNVKSSMCSAVPGRSELIRIPGDAPKPHCERCLLTPPFEAPYALLTPVFGPALRVPLLPEQVSQTLESPLVRAQSARAPPRA*
Ga0068865_1002281092	3300006881	Miscanthus Rhizosphere	MRAVTRFRSLRLRSFMMPLLLAALALRVLIPDVMSDPDMSGMSVKSSMCSAVPGRSELIRIPGDAPKPHCERCLLTPPFEAPYALLTPIFGPALHVPLLPEQFSQTLESPLARAQSARAPPRA*
Ga0068865_1017921191	3300006881	Miscanthus Rhizosphere	VKRFRSLRLRSFTMPLLLAALALRVLIPDVMSGQDMSGISGISVKSSMCSAVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAIQVPLLPEQVSQSPESPLVRAQSARAPPHA*
Ga0111539_111801742	3300009094	Populus Rhizosphere	MPLLLAALALRVLIPDVMSGQDMSGISVKSSICSAVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAIQVPLLPEQVSQLPESPLPRAQSARAPPHA*
Ga0111539_123387842	3300009094	Populus Rhizosphere	MLRSRFVLAAALLLAALTLRVLIATDVMPEAGMSGMTVRSSMCSATPGRSELIEIPGDAVKPHCERCLLTPPFEAPYALLTPALRPAVQVPLLPEQVSQTAEAPLPRAQSARAPPHA*
Ga0105243_104105002	3300009148	Miscanthus Rhizosphere	MRAVTRFRSLRLRSFMMPLLLAALALRVLIPDVMSDPDMSGMSVNSSMCSAVPGRSELIRIPGDAPKPHCERCLLTPPFEAPYALLTPIFGPALRVPLLPEQFSQTLESPLARAQSARAPPRA*
Ga0111538_110158511	3300009156	Populus Rhizosphere	MMPLLLAALALRVLIPDVMSGQDMSGMSVRSSMCSAVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAIQVPLLPEQVSQ
Ga0114942_13015501	3300009527	Groundwater	MPLLLAALALRVLIPSDVVHSQSMTLASSMCSTDAERTELIEIPVESSQPHCERCLLTPPFEAPYAFLNLDLGPAVQVPLLPERVSQVPESPLARAQAARAPPHA*
Ga0105249_100502921	3300009553	Switchgrass Rhizosphere	MMPLLLAALALRVLILDVMSGPDMSGMSVKSSMCSTVPGRSELIEIPDDAPKSHCERCLLTPPFEAPYALLTPVFGTAVQVPLLPEQVSQSPESPLVRAQS
Ga0134124_105236171	3300010397	Terrestrial Soil	MMPLLLAALALRVLIPDVMSDPDMSGMSVNSSMCSAVPGRSELIRIPGDAPKPHCERCLLTPPFEAPYALLTPIFGPALRVPLLPEQFSQTLESPLVRAQSARAPPRA*
Ga0134123_113056771	3300010403	Terrestrial Soil	MMPLLLAALGLRVLIPDVMSDPDMSGMSVKSSMCSAVPGRSELIRIPGDAPKPHCERCLLTPPFEAPYALLTPIFGPALRVPLLPEQFSQTLESPLARAQSARAPPRA*
Ga0137466_10511441	3300011399	Soil	MRGVTRFRSLGVRSMLMPLLLAALVLRVLIPSDVGHAQNMSLASSMCSTDPQRSELIEIPAEPSQPHCERCLLTPPFEAPYAFLALVFGPAVQVPLLPERASQLPESPLVRAQTARGPPH
Ga0137451_10168652	3300011438	Soil	MMPLLLAALALRVLIPDVMSGQDMSGMSLTSSMCSTVPGRSELIEIPGDSPKTHCERCLLTPPFEAPYALLTPVFGTAVQVPLLPEQVSQTPESPLARAQSARAPPHA*
Ga0157281_10194871	3300012883	Soil	MPLLLAALALRVLIPDVMSGQDMSGISVKSSICSAVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAIQVPLLPEQVSQSPESPLVRAQSARAPPRA*
Ga0157294_101329362	3300012892	Soil	MMPLLLAALALRVLIPDVMSGQDMSGMSVKSSMCSAVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAIQVPLLPEQVSQLPESPLPRAQSARAPPHA*
Ga0157284_101149081	3300012893	Soil	RLRSFMMPLLLAALALRVLIPDVMSGQDMSGMSVKSSMCSAVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAIQVPLLPEQVSQLPESPLPRAQSARAPPHA*
Ga0157309_103673881	3300012895	Soil	MPLLLAALALRVLIPDVMSGQDMSGMSVKSSMCSAVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAIQVPLLPEQVSQSPESPLVRAQSARAPPHA*
Ga0157292_100656642	3300012900	Soil	MPLLLAALALRVLIPDVMTGEAISGMTLTSSMCSSVPGRSELIEIPGEAPKPHCERCLLTPPFEAPYALLTPALRPVVQVPLLPGQVSQIPESPLARA
Ga0157292_102743722	3300012900	Soil	MPLLLAALALRVLIPDVMSVQDMSGISVKSSICSAVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAVQVPLLPEQVSQSPESPLARAQSARAPPH
Ga0157288_100115152	3300012901	Soil	MPLLLAALALRVLIPDVMSGQDMSGISGISVKSSMCSAVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAIQVPLLPEQVSQLPESPLPRAQSARAPPHA*
Ga0157291_100093863	3300012902	Soil	MMPLLLAALALRVLIPDVMSGQDMSGMSVESSMCSTVPGRSELIEIPDDAPKSHCERCLLTPPFEAPYALLTPVFGTAVQVPLLPEQVSQSPESPLVRAQSARAPPHA*
Ga0157289_100549191	3300012903	Soil	RSLRLRSFMMPLLLAALALRVLIPDVMSGQDMSGMSVKSSICSAVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAIQVPLLPEQVSQLPESPLPRAQSARAPPHA*
Ga0157282_102847041	3300012904	Soil	MMPLLLAALALRVLIPDVMTGDAMNGMPVTSAMCSSVPGRSELIEIPEEAPKPHCERCLLTPPFEAPYALLTPALRPVVQVPLLPEQVSQVPESPLARAQSARAPPHA*
Ga0157295_101961012	3300012906	Soil	LALRVLIPDVMSGQDMSGISVKSSICSAVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAIQVPLLPEQVSQLPESPLPRAQSARAPPHA*
Ga0157286_104549871	3300012908	Soil	MPLLLAALALRVLIPDVMSGQDMSGISVKSSICSAVPGRSELIEIPEEAPKPHCERCLLTPPFEAPYALLTPALRPVVRVPLLPEQVSQIPESPLARAQSARAPPHA*
Ga0157290_100474742	3300012909	Soil	MMPLLLAALALRVLIPDVMSGQDMGGMSVKSPMCSAVPGRSEVIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAVQVPLLPEQVSQSPESPLARAQSARAPPHA*
Ga0157297_100721392	3300012914	Soil	MMPLLLAALALRVLIPDVMSGQDMSGMSVKSSMCSAVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAVQVPLLPEQVSQSPESPLARAQSARAPPHA*
Ga0157297_104717242	3300012914	Soil	SFTMPLLLAALALRVLIPDVMSGQDMSGISVKSPMCSAVPGRSELIEIPDDAPKSHCERCLLTPPFEAPYALLTPVFGTAVQVPMLPEQVSQSPESPLVRAQSARAPPRA*
Ga0157302_101770451	3300012915	Soil	MRAVTRFRSLRLRSFMMPLLLAALALRVLIPDVMSGQDMSGMSVKLSMCSAVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAVQVPLLPEQVSQSPESPLARAQSARAPPHA*
Ga0157310_100623452	3300012916	Soil	MMPLLLAALALRVLIPDVMSGQDMSGISGISVKSSMCSAVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAIQVPLLPEQVSQLPESPLPRAQSARAPPHA*
Ga0164308_103265073	3300012985	Soil	MRAVTRFRSLRLRSFMMPLLLAALALRVLIPDVMSDPDMNGMSVKSSMCSAVPRRSELIRIPGDAPKPHCERCLLTPPFEAPYALLTPIFGPALRVPLLP*
Ga0163162_102204473	3300013306	Switchgrass Rhizosphere	MMPLLLAALALRVLIPDVMSDPDMSGMSVKSSMCSAVPGRSELIRIPGDAPKPHCERCLLTPPFEAPYALLTPIFGPALRVPLLPEQFSQTLESPLVRAQSARAPPRA*
Ga0163162_111541242	3300013306	Switchgrass Rhizosphere	MMPLLLAALALRVLIPDVMSDPDMSGMSVKSSMCSAVPGRSELIRIPGDAPKPHCERCLLTPPFEAPYALLTPIFGPALRVPLLPEQFSQTLESPLARAQSARAPPRA*
Ga0157380_100434492	3300014326	Switchgrass Rhizosphere	MRDVTRFRSLRLTSFMMPLLLAALALRVLIPSDVVHRQSMSVASSMCSTDKERSEVIEIPADAPQPHCERCLLTPPFEAPYAFLAPVLGPAVQVPLLPEQVSQVPESPLVRAQAARAPPHA*
Ga0157380_107693722	3300014326	Switchgrass Rhizosphere	MMPLLLAALVLRVLIPTDVMPVSGMGGMLSVESSLCSNGLDRNERIEIPGDVPQPHCERCLLTPPFEAPYAFLLPTFSRVAQVPLLPEKVSQKPDAPLVRAQAARAPPHA*
Ga0157376_100153051	3300014969	Miscanthus Rhizosphere	RMRAVTRFRSLRLRSFMMPLLLAALALRVLIPDVMSDPDMSGMSVNSSMCSAVPGRSELIRIPGDAPKPHCERCLLTPPFEAPYALLTPIFGPALHVPLLPEQFSQTLESPLARAQSARAPPRA*
Ga0157376_101621765	3300014969	Miscanthus Rhizosphere	RMRAVTRFRSLRLRSFMMPLLLAALALRVLIPDVMSDPDMNGMSVKSSMCSAVPRRSELIRIPGDAPKPHCERCLLTPPFEAPYALLTPIFGPALRVPLLPEQFSQTLESPLARAQSARAPPRA*
Ga0173480_100744453	3300015200	Soil	MPLLLAALALRVLIPDVMTGDAMNGMPVTSAMCSSVPGRSELIEIPEEAPKPHCERCLLTPPFEAPYALLTPALRPVVRVPLLPEQVSQIPESPLARAQSARAPPHA*
Ga0173478_100647152	3300015201	Soil	MPLLLAALALRVLIPDVMSGQDMSGISVKSSICSAVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAIQVPLLPEQVSQSPESPLARAQSARAPPHA*
Ga0163161_101545213	3300017792	Switchgrass Rhizosphere	RMRAVTRFRSLRLRSFMMPLLLAALALRVLIPDVMSDPDMSGMSVKSSMCSALPGRSELIRIPGDAPKPHCERCLLTPPFEAPYALLTPIFGPALRVPLLPEQFSQTLESPLVRAQSARAPPRA
Ga0163161_106094592	3300017792	Switchgrass Rhizosphere	RMRAVTRFRSLRLRSFMMPLLLAALALRVLIPDVMSDPDMNGMSVKSSMCSAVPRRSELIRIPGDAPKPHCERCLLTPPFEAPYALLTPIFGPALRVPLLPEQFSQTLESPLARAQSARAPPRA
Ga0163161_119867381	3300017792	Switchgrass Rhizosphere	MRAVTRFRSLRLRSFMMPLLLAALALRVLIPDVMSGQDMSGISGISVKSSMCSAVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAIQVPLLPEQVSQLPESPLPRAQSARAPPHA
Ga0184624_100233471	3300018073	Groundwater Sediment	VIRFRSLRLRSFMMPLLLAALALRVLIPDVMSGQDMSGISVKSSICSAVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAIQVPLLPEQVSQLPESPLPRAQSARAPPHA
Ga0184639_101067861	3300018082	Groundwater Sediment	MRAVTRFRSLRLRSFMMPLLLAALALRVLIPDVMSGQDMSGMSVESSMCSTVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAVQVPLLPEQVSQSPESPLVRAQSARAPPRA
Ga0184628_100782812	3300018083	Groundwater Sediment	MMPLLLAALALRVLIPDVMPVQDVSGVSVRSSLCSAVPGRSELIEIPDDAPKSHCERCLLTPPFEAPYALLTPVFGTAVQVPLLPEQVSQTPESPLARAQSARAPPHA
Ga0190270_100467053	3300018469	Soil	FRSFLMPLLLAALVLRVLIPSDVMHSQSMSLASSMCSTDPNRSELIEIPVESSQPHCERCLLTPPFEAPYAFLNLDLGPAVQVPLLPERVSQVPEAPLVRAQAARAPPHA
Ga0190270_101837642	3300018469	Soil	VTRFRSLRFRSFMMPLLLAALVLRVLIPTDVVHSQTMSLASSMCSTDPQRSERIEIPVEPSQPHCERCLLTPPFDAPYAFLSPVFGPAVQVRLAPERVSQVPESPLVRAQAARAPPHA
Ga0190274_102492662	3300018476	Soil	VTRFRSLRLRSFMMPLLLAALALRVLTPDVMSDGMDGTMSVTSSMCSTDPGRSELIEIPGDTPKPHCERCLLTPPFEAPYALLTPVFGPAVQVPLLPEQVSQTPETPLARAQSARAPPHA
Ga0190274_123868982	3300018476	Soil	MMPLLLAALALRVLIPDVMSGPDMSGMSVRSSMCSAVPGRSELIEIPDDAPKSHCERCLLTPPFEAPYALLTPLFGTVVQVPLLPEQVSQSPESPLARAQSARAPPHA
Ga0190274_125807882	3300018476	Soil	PLLLAALALRVLIPDVMSGQDMSGMSVKSSMCSAVPGRSELIEIPDEAPKTHCERCLLTPPFEAPYALLTPVFGTAVQVPLLPEQVSQSPESPLARAQSARAPPHA
Ga0190271_1000020920	3300018481	Soil	MRVVTRFRSLRFRSLMMPLLLAALVLRVLIPSDVVHSQSMTLASSMCSTDSQRTDLIEIPVESSQPHCERCLLTPPFEAPYAFLNLDLGPAVQVPLLPERVSQVPEAPLVRAQAARAPPH
Ga0190271_119742631	3300018481	Soil	VLRFRSLRLRSFMMPLLLAALALRVLIPDVMSGQDMSGMSVNSSMCSAVPGRSELIEIPGDAPKQHCERCLLTPPFEAPYALLTPVFGPALQAPLLPEQVSQSPESPLARAQSARAPPHA
Ga0190271_121027641	3300018481	Soil	VIRFRSLRLRSFMMPLLLAALALRVLIPDVMPGQDMSGMSVTSSMCSTVPGRSELIEIPDDAPKSHCERCLLTPPFEAPYALLTPIFGPAVQVPLLPEQVSQTPESPLARAQSARAPPHA
Ga0173479_100708892	3300019362	Soil	MRAVTRFRSLRLRSFMMPLLLAALALRVLIPDVMSGQDMSGISGISVKSSMCSAVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAIQVPLLPEQVSQLPEFPLPRAQSARAPPHA
Ga0193752_10299311	3300020027	Soil	MRGVTRFRSLRFRSFVMPLLLAALALRVLIPTDVMPVHGANGTSSLVSSMCSGDPARSEVIEIPGDAPQPHCERCLLTPPFEAPYAFLSPVFGPAVQIPLLPERVSQVPESP
Ga0247774_10809612	3300022903	Plant Litter	VKRFRSLRLRSFTMPLLLAALALRVLIPDVMSGQDMSGISGISVKSSMCSAVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAIQVPLLPEQVSQLPESPL
Ga0247790_100630332	3300022915	Soil	VKRFRSLRLRSFTMPLLLAALALRVLIPDVMSGQDMSGISGISVKSSMCSAVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAIQVPLLPEQVSQSPESPLVRAQSARAPPHA
Ga0247801_10127931	3300023064	Soil	VKRFRSLRLRSFTMPLLLAALALRVLIPDVMSGQDMSGMSVKSSMCSAVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAVQVPLLPEQVSQSPESPLVRAQSARAPPHA
Ga0247744_10089462	3300023073	Soil	VKRFRSLRLRSFTMPLLLAALALRVLIPDVMSGQDMSGISGISVKSSMCSAVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAIQVPLLPEQVSQLPEFPLPRAQSARAPPHA
Ga0247796_10093852	3300023261	Soil	VKRFRSLRLRSFTMPLLLAALALRVLIPDVMSVQDMSGISGISVKSSMCSAVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAIQVPLLPEQVSQLPESPLPRAQSARAPPHA
Ga0247800_10178322	3300023263	Soil	VKRFRSLRLRSFTMPLLLAALALRVLIPDVMSGQDMSGISVKSSMCSAVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAIQVPLLPEQVSQLPEFPLPRAQSARAPPHA
Ga0247784_11226622	3300023270	Plant Litter	VKRFRSLRLRSFMMPLLLAALALRVLIPDVMSGQDMSGMSVKSSICSAVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAIQVPLLPEQVSQLPEFPLPRAQSARAPPHA
Ga0207697_103740331	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	ALRVLIPDVMSGQDMSGISVKSSICSAVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAVQVPLLPEQVSQSPESPLVRAQSARAPPHA
Ga0207682_100076863	3300025893	Miscanthus Rhizosphere	VKRFRSLRLRSFTMPLLLAALALRVLIPDVMSGQDMSGMSVKSSMCSTVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAIQVPLLPEQVSQLPESPLPRAQSARAPPHA
Ga0207642_103968062	3300025899	Miscanthus Rhizosphere	MRAVTRFRSLRLRSFMMPLLLAALALRVLIPDVMSDPDMSGMSVNSSMCSAVPGRSELIRIPGDAPKPHCERCLLTPPFEAPYALLTPIFGPALHVPLLPEQFSQTLESPLARAQSARAPPRA
Ga0207643_107652231	3300025908	Miscanthus Rhizosphere	LISPSFPLLAALALRVLIPDVMTGEAISGMTLTSSMCSSVPGRSELIEIPGEAPKPHCERCLLTPPFEAPYALLTPALRPVVQVPLLPEQVSQIHVSPLSRAQSARAPPHA
Ga0207662_101569422	3300025918	Switchgrass Rhizosphere	MMPLLLAALALRVLIPDVMSGQDMSGISVKSSICSAVPGRSELIEIPGDAPKPHCERCLLTPPFEAPYALLTPVFGTAIQVPLLPEQVSQLPEFPLPRAQSARAPPHA
Ga0207681_104355473	3300025923	Switchgrass Rhizosphere	ALALRVLIPDVMSGPDMSGMSVKSSMCSTVPGRSELIEIPDDAPKSHCERCLLTPPFEAPYALLTPVFGTAVQVPLLPEQVSQSPESPLVRAQSARAPPHA
Ga0207701_102501931	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	RSFTMPLLLAALALRVLIPDVMSGQDMSGISVKSSICSAVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAIQVPLLPEQVSQLPESPLPRAQSARAPPHA
Ga0207701_104030752	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	VIRFRSLRLRSFMMPLLLAALALRVLIPDVMSGQDMSGMSVKSSMCSTVPGRSELIEIPDDAPKAHCERCLLTPPFEAPYALLTPVFGTAVQVPLLPEQVSQSPESPLVRAQSARAPPHA
Ga0207686_101012403	3300025934	Miscanthus Rhizosphere	MRAVTRFRSLRLRSFMMPLLLAALALRVLIPDVMSDPDMSGMSVKSSMCSAVPGRSELIRIPGDAPKPHCERCLLTPPFEAPYALLTPIFGPALRVPLLPEQFSQTLESPLVRAQSARAPPRA
Ga0207669_100554821	3300025937	Miscanthus Rhizosphere	VKRFRSLRLRSFTMPLLLAALALRVLIPDVMSGQDMSGISVKSSICSAVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAIQVPLLPEQVSQLPEFPLPRA
Ga0207669_100979002	3300025937	Miscanthus Rhizosphere	VIRFRSLRLRSFMMPLLLAALALRVLIPDVMSGPDMSGMSVKSSMCSTVPGRSELIEIPDDAPKSHCERCLLTPPFEAPYALLTPVFGTAVQVPLLPEQVSQSPESPLVRAQSARAPPHA
Ga0207669_101390823	3300025937	Miscanthus Rhizosphere	MRAVTRFRSLRLRSFTMPLLLVALALRVLIPTDVMPEHGVSGMMVQSSMCSATPGRSEVIEIPADAAKPHCERCLLTPPFEAPYALLTPALRPVVQVPLLPEQVSQIHVSPLSRAQSARAPPHA
Ga0207704_110487212	3300025938	Miscanthus Rhizosphere	MRAVTRFRSLRLRSFMMPLLLAALALRVLIPDVMSDPDMSGMSVNSSMCSAVPGRSELIRIPGDAPKPHCERCLLTPPFEAPYALLTPIFGPALHVPLLPEQFSQTLESPLARAQSARAP
Ga0207704_111309871	3300025938	Miscanthus Rhizosphere	VKRFRSLRLRSFTMPLLLAALALRVLIPDVMSGQDMSGISVKSSICSAVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAIQVPLLPEQVSQLPEFPLP
Ga0207691_101366173	3300025940	Miscanthus Rhizosphere	MRAVTRFRSLRLRSFMMPLLLAALALRVLIPDVMSGQDMSGMSVESSMCSTVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAIQVPLLPEQVSQLPESPLPRAQSARAPPHA
Ga0207711_104053643	3300025941	Switchgrass Rhizosphere	MRAVTRFRSLRLRSFMMPLLLAALALRVLIPDVMSDPDMNGMSVKSSMCSAVPRRSELIRIPGDAPKPHCERCLLTPPFEAPYALLTPIFGPALRVPLLPEQFSQTLESPLARAQSARAPPRA
Ga0207651_108599912	3300025960	Switchgrass Rhizosphere	VTRFRSLRLRSFTMPLLLAALALRVLIPDVMTGEAISGMTLTSSMCSSVPGRSELIEIPGEAPKPHCERCLLTPPFEAPYALLTPALRPAVQVPLLPEQVSQIPESPLARAQSARAPPHA
Ga0207668_102769862	3300025972	Switchgrass Rhizosphere	MMPLLLAALALRVLIPDVMSGPDMSGMSVKSSMCSTVPGRSELIEIPDDAPKSHCERCLLTPPFEAPYALLTPVFGTAVQVPLLPEQVSQSPESPLVRAQSARAPPHA
Ga0207658_111519762	3300025986	Switchgrass Rhizosphere	VTRFRSLRLRSFMMPLLLAALALRVLIPDVMSDPDMSGMSVKSSMCSAVPGRSELIRIPGDAPKPHCERCLLTPPFEAPYALLTPIFGPALRVPLLPEQFSQTLESPLARAQSARAPPRA
Ga0207658_120050052	3300025986	Switchgrass Rhizosphere	RSFMMPLLLAALALRVLIPDVMSGQDMSGMSVKSSICSAVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAIQVPLLPEQVSQLPESPLPRAQSARAPPHA
Ga0207639_110610581	3300026041	Corn Rhizosphere	MRAVTRFRSLRLRSFMMPLLLAALALRVLIPDVMSGQDMSGISVKSSICSAVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAIQVPLLPEQVSQLPEFPLPRAQSARAPPHA
Ga0207641_100489613	3300026088	Switchgrass Rhizosphere	MRAVTRFRSLRLRSFMMPLLLAALALRVLIPDVMSDPDMSGMSVNSSMCSAVPGRSELIRIPGDAPKPHCERCLLTPPFEAPYALLTPIFGPALRVPLLPEQFSQTLESPLVRAQSARAPPRA
Ga0207641_107780071	3300026088	Switchgrass Rhizosphere	RTAWCSTAVPTSIANSYANSGSSRNSRWSRIRAVKRFRSLRLRSFTMPLLLAALALRVLIPDVMSGQDMSGISVKSSICSAVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAIQVPLLPEQVSQLPESPLPRAQSARAPPHA
Ga0207648_100893173	3300026089	Miscanthus Rhizosphere	RLRSFMMPLLLAALALRVLIPDVMSGPDMSGMSVKSSMCSTVPGRSELIEIPDDAPKSHCERCLLTPPFEAPYALLTPVFGTAVQVPLLPEQVSQSPESPLVRAQSARAPPHA
Ga0207683_100394033	3300026121	Miscanthus Rhizosphere	MRAVTRFRSLRLRSFMMPLLLAALALRVLIPDVMSGQDMSGISVKSSMCSAVPGRSELIEIPDDAPKTHCERCLLTPPFEAPYALLTPVFGTAIQVPLLPEQVSQLPESPLPRAQSARAPPHA
Ga0307503_106832182	3300028802	Soil	FRSLRLRSFMMPLLLAALALRVLIPDVMSGQDMSGMSVESSMCSTVPGRSELIEIPGEATKPHCERCLLTPPFEAPYALLTPVFGTAVQVPLLPEQVSQSPESPLARAQSARAPPHA
Ga0307499_100027754	3300031184	Soil	MRGVTRLRSLRLRSWILPLLLGAFALRVLIPGGFMPVSGDGMSLTVSMCSTAPGRSESLEIPGEAPKTHCDRCLLSPPFEAPYAFLTPVFAPVTHAPLLPRRASQIPESPLARAQSARAPPHA
Ga0307506_100423662	3300031366	Soil	MRAVTRFRSLRLRSFMMPLLLAALALRVLIPDVMSDPDMSGMSVKSSMCSAVPGRSELIRIPGDAPKPHCERCLLTPPFEAPYALLTPIFGPVRKVPLLPEQSSQTLESPLARAQSARAPPRA
Ga0307506_100509052	3300031366	Soil	MRAVTRFRSLRLRNLTMPLLLAALALRMLIPDVMPGDDMSGMTVSSSMCSGIRSRTERIEIPGEAPRPHCERCLLTPPFEAPYALLTPVFRPAVQIPLLPEQVSQTAESPLVRAQSARAPPHA
Ga0307506_104273761	3300031366	Soil	RWSRMRAVTRFRSLRLRSFTMPLLLAALVLRVLIPDVMTGNDMSGMTVKSSMCATVPGRSERIEIPGEVRKPHCDRCLLTPPFEAPYALMTLALRPVVQVPLLPEQVSQIPESPLARAQTARAPPHA
Ga0310899_104059191	3300032017	Soil	VKRFRSHRARSLTMPLLLAALVLRVLIPTDVMPVTGMGGDMSLTSSLCSSGPDRTERVEIPGDSPRPHCERCLLTPPFEAPYAFLAPIFTPATQVPLLPEQVSQRPDASLVRAQAARAPPHA
Ga0315910_100331631	3300032144	Soil	MRGVTRLRSLRFRSRLMPLLLAALVLRVLIPTDVMPMQGMNGDMTLVSSMCSNDSGRSELIEIPGDTPQPHCERCLLTPPFEAPYAFLGPVFSPVVRVPLLPALVSQIPESPLVRAQVARAPPHA
Ga0315912_100028298	3300032157	Soil	MRGVKRFRSHRIRSLTMPLLLAALVLRVLIPSDVMPMTGVGGTLMVEATPCSSGSSRTERIEIPADTPRPHCERCLLTPPFEAPYAFLQPAFTRVVQVPLLPERVSQSPDAPLVRAQGARAPPHA
Ga0315912_101786392	3300032157	Soil	MRGVTRFRSLRLRSLMMPLLLAALVLRILIPSDVMPVAGKNGTMTVASSLCSSGGSDRTERIEIPGETPKPHCERCLLTPPFEAPYAFLLPTFTRVVQIPLLPEQVSLTPDAPLVRAQTARAPPHA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F068960

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences