Metagenome Family F068953

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F068953
Family Type	Metagenome
Number of Sequences	124
Average Sequence Length	74 residues
Representative Sequence	LSSPQGIPRDPESVWTLREHDWRNRAHDPRVSAHDAAQRIRTAVEAAESELRRSDAPETVEPYPLFLFDRRRRE
Number of Associated Samples	101
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.81 %
% of genes near scaffold ends (potentially truncated)	98.39 %
% of genes from short scaffolds (< 2000 bps)	95.97 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (95.968 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (16.129 % of family members)
Environment Ontology (ENVO)	Unclassified (33.065 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (53.226 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 29.41% β-sheet: 1.96% Coil/Unstructured: 68.63%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF00005	ABC_tran	4.03
PF04773	FecR	2.42
PF03422	CBM_6	2.42
PF03466	LysR_substrate	1.61
PF00924	MS_channel	1.61
PF07593	UnbV_ASPIC	1.61
PF02687	FtsX	1.61
PF00069	Pkinase	1.61
PF03929	PepSY_TM	1.61
PF00749	tRNA-synt_1c	1.61
PF00903	Glyoxalase	1.61
PF13581	HATPase_c_2	0.81
PF00561	Abhydrolase_1	0.81
PF13517	FG-GAP_3	0.81
PF10067	DUF2306	0.81
PF08448	PAS_4	0.81
PF00871	Acetate_kinase	0.81
PF00498	FHA	0.81
PF00593	TonB_dep_Rec	0.81
PF13751	DDE_Tnp_1_6	0.81
PF00432	Prenyltrans	0.81
PF00391	PEP-utilizers	0.81
PF08241	Methyltransf_11	0.81
PF12704	MacB_PCD	0.81
PF07883	Cupin_2	0.81
PF06197	DUF998	0.81
PF01207	Dus	0.81
PF12848	ABC_tran_Xtn	0.81
PF00266	Aminotran_5	0.81
PF13620	CarboxypepD_reg	0.81
PF00194	Carb_anhydrase	0.81
PF01636	APH	0.81
PF01738	DLH	0.81
PF13172	Obsolete Pfam Family	0.81
PF13602	ADH_zinc_N_2	0.81
PF00199	Catalase	0.81
PF13637	Ank_4	0.81
PF00196	GerE	0.81
PF13561	adh_short_C2	0.81
PF06441	EHN	0.81
PF13091	PLDc_2	0.81
PF00756	Esterase	0.81
PF00106	adh_short	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	6.45
COG0008	Glutamyl- or glutaminyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	1.61
COG0668	Small-conductance mechanosensitive channel	Cell wall/membrane/envelope biogenesis [M]	1.61
COG3182	PepSY-associated TM region	Function unknown [S]	1.61
COG3264	Small-conductance mechanosensitive channel MscK	Cell wall/membrane/envelope biogenesis [M]	1.61
COG3295	Uncharacterized conserved protein	Function unknown [S]	1.61
COG0042	tRNA-dihydrouridine synthase	Translation, ribosomal structure and biogenesis [J]	0.81
COG0282	Acetate kinase	Energy production and conversion [C]	0.81
COG0596	2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase MenH and related esterases, alpha/beta hydrolase fold	Coenzyme transport and metabolism [H]	0.81
COG0753	Catalase	Inorganic ion transport and metabolism [P]	0.81
COG3338	Carbonic anhydrase	Inorganic ion transport and metabolism [P]	0.81
COG3371	Uncharacterized membrane protein	Function unknown [S]	0.81
COG3426	Butyrate kinase	Energy production and conversion [C]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.97 %
Unclassified	root	N/A	4.03 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.97 %
Unclassified	root	N/A	4.03 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.97 %
Unclassified	root	N/A	4.03 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	73.39 %
Unclassified	root	N/A	4.03 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.42 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	57.26 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	4.03 %
Unclassified	root	N/A	4.03 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	2.42 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.81 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.81 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.81 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	57.26 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	4.03 %
Unclassified	root	N/A	4.03 %
unclassified Blastocatellia	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia	2.42 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.81 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.81 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	57.26 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	4.03 %
Unclassified	root	N/A	4.03 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2.42 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.81 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.81 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	57.26 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	4.03 %
Unclassified	root	N/A	4.03 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2.42 %
Candidatus Sulfotelmatobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter	0.81 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.81 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	57.26 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	4.03 %
Unclassified	root	N/A	4.03 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2.42 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	0.81 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.81 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	57.26 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	4.03 %
Unclassified	root	N/A	4.03 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2.42 %
unclassified Polyangiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae	0.81 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.81 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	57.26 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	4.03 %
Unclassified	root	N/A	4.03 %
Blastocatellia bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	2.42 %
Polyangiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium	0.81 %
Candidatus Sulfotelmatobacter kueseliae	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	0.81 %
Bradyrhizobium elkanii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	0.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2032320006\|FACEOR_FYWIORV02F9AHN	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	501	Open in IMG/M
2070309009\|GPKNP_GG3DY5401DLP2N	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300003321\|soilH1_10051168	All Organisms → cellular organisms → Bacteria	4286	Open in IMG/M
3300004463\|Ga0063356_104951855	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300004479\|Ga0062595_100270558	Not Available	1120	Open in IMG/M
3300004643\|Ga0062591_100165773	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1567	Open in IMG/M
3300004643\|Ga0062591_101563582	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300004643\|Ga0062591_102227161	All Organisms → cellular organisms → Bacteria → Acidobacteria	570	Open in IMG/M
3300004782\|Ga0062382_10030322	All Organisms → cellular organisms → Bacteria	1859	Open in IMG/M
3300005293\|Ga0065715_10503452	All Organisms → cellular organisms → Bacteria	748	Open in IMG/M
3300005328\|Ga0070676_10609078	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	788	Open in IMG/M
3300005336\|Ga0070680_100360752	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1236	Open in IMG/M
3300005354\|Ga0070675_100524056	All Organisms → cellular organisms → Bacteria	1069	Open in IMG/M
3300005466\|Ga0070685_11311173	All Organisms → cellular organisms → Bacteria → Acidobacteria	553	Open in IMG/M
3300005545\|Ga0070695_100508206	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	933	Open in IMG/M
3300005545\|Ga0070695_101120510	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	645	Open in IMG/M
3300005548\|Ga0070665_101053544	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	825	Open in IMG/M
3300005578\|Ga0068854_101341636	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	645	Open in IMG/M
3300005615\|Ga0070702_100634083	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	806	Open in IMG/M
3300005616\|Ga0068852_100143507	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2212	Open in IMG/M
3300005719\|Ga0068861_102456618	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300005764\|Ga0066903_103520834	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	844	Open in IMG/M
3300005764\|Ga0066903_106888511	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	590	Open in IMG/M
3300005840\|Ga0068870_11246666	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M
3300005844\|Ga0068862_101535993	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	672	Open in IMG/M
3300005844\|Ga0068862_102241172	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	558	Open in IMG/M
3300006031\|Ga0066651_10753848	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300006237\|Ga0097621_101147535	All Organisms → cellular organisms → Bacteria	731	Open in IMG/M
3300006844\|Ga0075428_100624882	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1150	Open in IMG/M
3300006844\|Ga0075428_102051906	All Organisms → cellular organisms → Bacteria → Acidobacteria	592	Open in IMG/M
3300006846\|Ga0075430_100519013	All Organisms → cellular organisms → Bacteria → Acidobacteria	983	Open in IMG/M
3300006871\|Ga0075434_101490708	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	686	Open in IMG/M
3300006871\|Ga0075434_101975686	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300006871\|Ga0075434_102308838	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300006876\|Ga0079217_10596955	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300006881\|Ga0068865_100804003	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	811	Open in IMG/M
3300006954\|Ga0079219_11661175	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	589	Open in IMG/M
3300006969\|Ga0075419_11141907	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300007004\|Ga0079218_11408108	All Organisms → cellular organisms → Bacteria	745	Open in IMG/M
3300009094\|Ga0111539_10837435	All Organisms → cellular organisms → Bacteria → Acidobacteria	1070	Open in IMG/M
3300009094\|Ga0111539_11815485	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	707	Open in IMG/M
3300009098\|Ga0105245_10794961	All Organisms → cellular organisms → Bacteria	984	Open in IMG/M
3300009098\|Ga0105245_12553168	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300009147\|Ga0114129_10603376	All Organisms → cellular organisms → Bacteria	1422	Open in IMG/M
3300009147\|Ga0114129_11399202	Not Available	863	Open in IMG/M
3300009147\|Ga0114129_13425467	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300009148\|Ga0105243_10428579	All Organisms → cellular organisms → Bacteria	1236	Open in IMG/M
3300009156\|Ga0111538_11757530	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300009156\|Ga0111538_12484744	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	650	Open in IMG/M
3300009174\|Ga0105241_12324947	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300009553\|Ga0105249_12061589	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300009840\|Ga0126313_11502582	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300010045\|Ga0126311_10722699	All Organisms → cellular organisms → Bacteria	797	Open in IMG/M
3300010362\|Ga0126377_10900628	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	947	Open in IMG/M
3300010397\|Ga0134124_10542161	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1131	Open in IMG/M
3300010397\|Ga0134124_11294266	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	752	Open in IMG/M
3300010399\|Ga0134127_12050469	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300010400\|Ga0134122_13230942	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	511	Open in IMG/M
3300010403\|Ga0134123_12808469	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300011400\|Ga0137312_1040690	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	741	Open in IMG/M
3300011406\|Ga0137454_1097369	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300011439\|Ga0137432_1136048	All Organisms → cellular organisms → Bacteria	785	Open in IMG/M
3300012212\|Ga0150985_104353823	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	925	Open in IMG/M
3300012906\|Ga0157295_10150657	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300012911\|Ga0157301_10289626	All Organisms → cellular organisms → Bacteria → Acidobacteria	593	Open in IMG/M
3300012915\|Ga0157302_10311248	All Organisms → cellular organisms → Bacteria → Acidobacteria	616	Open in IMG/M
3300012957\|Ga0164303_10568489	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium elkanii	740	Open in IMG/M
3300012958\|Ga0164299_10660121	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	725	Open in IMG/M
3300012987\|Ga0164307_11681765	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	538	Open in IMG/M
3300012989\|Ga0164305_10843621	All Organisms → cellular organisms → Bacteria	764	Open in IMG/M
3300013296\|Ga0157374_11767135	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300013297\|Ga0157378_12682550	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	551	Open in IMG/M
3300014326\|Ga0157380_12402930	All Organisms → cellular organisms → Bacteria → Acidobacteria	592	Open in IMG/M
3300015201\|Ga0173478_10509026	All Organisms → cellular organisms → Bacteria → Acidobacteria	605	Open in IMG/M
3300015372\|Ga0132256_101271624	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	849	Open in IMG/M
3300015372\|Ga0132256_101988292	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	688	Open in IMG/M
3300015373\|Ga0132257_100324404	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1855	Open in IMG/M
3300015373\|Ga0132257_104098025	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	530	Open in IMG/M
3300015373\|Ga0132257_104409620	Not Available	512	Open in IMG/M
3300018081\|Ga0184625_10470810	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300018422\|Ga0190265_11708072	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	739	Open in IMG/M
3300018429\|Ga0190272_10038388	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → unclassified Polyangiaceae → Polyangiaceae bacterium	2670	Open in IMG/M
3300018429\|Ga0190272_10059254	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2262	Open in IMG/M
3300018429\|Ga0190272_10640259	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	942	Open in IMG/M
3300018432\|Ga0190275_13275271	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300018476\|Ga0190274_11576849	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	749	Open in IMG/M
3300018476\|Ga0190274_13835915	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300020021\|Ga0193726_1298200	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	626	Open in IMG/M
3300020022\|Ga0193733_1031389	Not Available	1500	Open in IMG/M
3300021067\|Ga0196978_1059640	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	721	Open in IMG/M
3300021078\|Ga0210381_10161203	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	766	Open in IMG/M
3300022756\|Ga0222622_10576108	All Organisms → cellular organisms → Bacteria	811	Open in IMG/M
3300025893\|Ga0207682_10279038	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	781	Open in IMG/M
3300025903\|Ga0207680_10211312	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1326	Open in IMG/M
3300025919\|Ga0207657_11011608	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300025919\|Ga0207657_11212365	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300025932\|Ga0207690_10725918	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	818	Open in IMG/M
3300025938\|Ga0207704_10665631	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	859	Open in IMG/M
3300025941\|Ga0207711_10690143	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	952	Open in IMG/M
3300026095\|Ga0207676_11692794	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	631	Open in IMG/M
3300026118\|Ga0207675_100303067	Not Available	1557	Open in IMG/M
3300026118\|Ga0207675_102703160	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300026142\|Ga0207698_10712660	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	999	Open in IMG/M
3300027873\|Ga0209814_10055974	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Sulfotelmatobacter → Candidatus Sulfotelmatobacter kueseliae	1648	Open in IMG/M
3300028380\|Ga0268265_11182466	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	762	Open in IMG/M
3300028768\|Ga0307280_10145372	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	816	Open in IMG/M
3300028876\|Ga0307286_10114093	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	955	Open in IMG/M
3300031228\|Ga0299914_10171142	All Organisms → cellular organisms → Bacteria	1927	Open in IMG/M
3300031538\|Ga0310888_10255390	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300031547\|Ga0310887_11117766	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	506	Open in IMG/M
3300031824\|Ga0307413_10530588	All Organisms → cellular organisms → Bacteria	951	Open in IMG/M
3300031846\|Ga0318512_10243323	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300031847\|Ga0310907_10864045	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300031854\|Ga0310904_10079626	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1738	Open in IMG/M
3300031854\|Ga0310904_10796271	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	661	Open in IMG/M
3300031858\|Ga0310892_10399162	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	895	Open in IMG/M
3300031940\|Ga0310901_10281679	All Organisms → cellular organisms → Bacteria	692	Open in IMG/M
3300032000\|Ga0310903_10133748	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium	1099	Open in IMG/M
3300032017\|Ga0310899_10353191	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	695	Open in IMG/M
3300032075\|Ga0310890_10205343	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1354	Open in IMG/M
3300032179\|Ga0310889_10510938	All Organisms → cellular organisms → Bacteria → Acidobacteria	610	Open in IMG/M
3300032211\|Ga0310896_10021472	All Organisms → cellular organisms → Bacteria → Acidobacteria	2299	Open in IMG/M
3300032421\|Ga0310812_10097060	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1207	Open in IMG/M
3300033289\|Ga0310914_11224644	All Organisms → cellular organisms → Bacteria	652	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	55.65%
Host-Associated	Host-Associated	44.35%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.00%
Plants	Host-Associated → Plants	44.35%
Aquatic	Environmental → Aquatic	5.65%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	28.23%
Rhizoplane	Host-Associated → Plants → Rhizoplane	15.32%
Sediment	Environmental → Aquatic → Sediment	4.03%
Freshwater	Environmental → Aquatic → Freshwater	1.61%
Roots	Host-Associated → Plants → Roots	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	43.55%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	20.16%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	11.29%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.06%
Loam	Environmental → Terrestrial → Soil → Loam	5.65%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.03%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.81%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.81%
Sand	Environmental → Terrestrial → Soil → Sand	0.81%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	23.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	20.16%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	11.29%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	9.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.06%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.45%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.03%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.61%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.61%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.81%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.81%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.81%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	0.81%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.13%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	12.10%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	9.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.65%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	4.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	3.23%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	2.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.42%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.42%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.42%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	1.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.61%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.61%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.81%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.81%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.81%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.81%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.81%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.81%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.81%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.81%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2032320006	Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2+	Environmental	Open in IMG/M
2070309009	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300004782	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011400	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT133_2	Environmental	Open in IMG/M
3300011406	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT539_2	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012906	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S212-509R-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018432	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020022	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1s2	Environmental	Open in IMG/M
3300021067	Soil microbial communities from Anza Borrego desert, Southern California, United States - S3+v_20-13C	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACEORE_954540	2032320006	Soil	ELLWILRENEWRNRAHDPRVSASDARQRIQKAVEAAESVLQRSESAETVEPYPLFLFDRRRRE
GPKNP_09013260	2070309009	Soil	GARFETTLESASPEGIPRDPESVWALREHDWRNRLRDSRVSIADAAQRIQMAVEAAESELRRSVMPESVEPYPLFLFDRRRRE
soilH1_100511681	3300003321	Sugarcane Root And Bulk Soil	PRDPESVWILREPDWRNRVPNPRASAEEVRQRIRTAVEGAENELRRSEAPETVEPYPLFMFDRRRRE*
Ga0063356_1049518551	3300004463	Arabidopsis Thaliana Rhizosphere	DPESVWSLQEHDWRNRPHNPAISTEEAIQRTRAAVEASQSELRQSEAPEAVEPYPLFLFDRRRRERSGGSLV*
Ga0062595_1002705581	3300004479	Soil	TLREDDWRNRATHPRMSADDARRRIRTAIEAAESELRASQAPETVEPYPLFLFDRRRRE*
Ga0062591_1001657731	3300004643	Soil	AGSSPQGIPRDPESVWTLWEHDWRNRARDPRASAHDAAQRIRAAAEAAESELRRSDVPETVEPYPLFLFDRRRRE*
Ga0062591_1015635821	3300004643	Soil	ASSPTGIPRDPESVWTLREDDWRNRATHPRMSADDARRRIRTAIEAAESELRASQAPETVEPYPLFLFDRRRRE*
Ga0062591_1022271612	3300004643	Soil	PESVWTLREPDWRNRARHPPVSAHDAAQRIRTAVEAVERELRRSDAPETVEPYPLFLFDRRRRE*
Ga0062382_100303223	3300004782	Wetland Sediment	PQGFPRDPESVWTLSEHDWRNRARALRVSADDAAQRIRTAVEVAESELRRSDAPETVEPYPLFLFDRRRRE*
Ga0065715_105034521	3300005293	Miscanthus Rhizosphere	VWTLREEEWRHRTRDPRVSAHDARQRIQGAVEAAQSELRRSESPEAVEPYPLFLFDRRRRE*
Ga0070676_106090782	3300005328	Miscanthus Rhizosphere	LQKLGARFESTLEVPAPNGIRRDPESVWGLREDDWRNRARDPRVSADDARQRLRAAIDAAQRELRRSEAPETVEPYPLFLFDRRRRD*
Ga0070680_1003607522	3300005336	Corn Rhizosphere	TIERSSPQGIPRDPESVWGLREHDWRNRLRDPRASAHDAARRIRTAVEAAMSELRRSEAPETVEPYPLFLFDRRRRE*
Ga0070675_1005240561	3300005354	Miscanthus Rhizosphere	RDPESVWTLREPEWRNLVRAPRVSAHDAAERIRRAVEAAESELRRSEAPETVEPYPLFLFDRRRRE*
Ga0070685_113111732	3300005466	Switchgrass Rhizosphere	VTTSPEGIPRDPQVVWTLREEDWRNRQPDRHPVSAEDARQRIHDAVEAAQSELRRSESPEAVEPYPLFLFDRRRRE*
Ga0070695_1005082061	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	LGAQFESTLTSLSPQGIARDPESVWGLREHDWRNRARDARLSAHEAAQRIRAAVLAAESELRRSVAPEAVEPYPLFLFDRRRRE*
Ga0070695_1011205102	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	QGIPRDPESVWTLREQDWRNRARDPGVSAHDAAQRIRTAIEAAESEVRRSDAPETVEPYPLFLFDRRRRG*
Ga0070665_1010535442	3300005548	Switchgrass Rhizosphere	SSPKGIPRDPELTWNLREDDWRNRVRDPRVSAHDARQRMQTAVEAAERELRQSESPETVEPYPLFMFDRRRRESS*
Ga0068854_1013416362	3300005578	Corn Rhizosphere	SPQGIPRDPESVWTLREQDWRNRARDPGVSAHDAAQRIRTAIEAAESEVRRSDAPETVEPYPLFLFDRRRRE*
Ga0070702_1006340831	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	GIPRDPETVWTLREHDWRNRVRDQHVSARDAAQRIRTAVEAAESELRRSELPETVEPYPLFLFDRRRRE*
Ga0068852_1001435071	3300005616	Corn Rhizosphere	QKLGARPESTVTTSSEQGIPRDPELVWTLREHEWRNRPHDPRPSADDARQRIQEAVAAAERVLQRSEPAEGVEPYPLFLFDRRRRE*
Ga0068861_1024566181	3300005719	Switchgrass Rhizosphere	KLGARFESTLAASSPTGIPRNPESVWTLREDDWRNRATHPRMSADDARRRIRTAIEAAESELRASQAPETVEPYPLFLFDRRRRE*
Ga0066903_1035208342	3300005764	Tropical Forest Soil	ESTIASSSPLGIPRDPELVWTLRENDWRNRAHTARESADAARQRIQKAVEAAESVLHSSESPETVEPYPLFLFDRRRKSTTSE*
Ga0066903_1068885111	3300005764	Tropical Forest Soil	KVGARFESTLITSSRNGIPRDPESVWTLYEHDWRNRTRDPRVSAHDNRQRLGKAVEAAESELRQSEAPHTVEPYPLFLFDRRRRE*
Ga0068870_112466662	3300005840	Miscanthus Rhizosphere	IPRDPESVWILREPDWRNRAPDPRVSAHDAAQRIRTAVEAAESELRRSDAPETVEPYPLFLFDRRRRE*
Ga0068862_1015359932	3300005844	Switchgrass Rhizosphere	IPRDPESVWTLREHDWRNRAREPRVSAHDAAQRIRTAVQAAESELRRSDVPETVEPYPLFLFDRRRRE*
Ga0068862_1022411722	3300005844	Switchgrass Rhizosphere	RDPESVWTLREHDWRNRTRDPRVSAHDAAQRIRTAVEAAESDLRQSAAPETVEPYPLFLFDRRRRE*
Ga0066651_107538481	3300006031	Soil	ARFESTLASSSPQGISRDPESVWILRDHDWSDRANNPGLLADDARERIRNAVDAAESELLRSEAPEAVEPYPLFLFDRRRRE*
Ga0097621_1011475352	3300006237	Miscanthus Rhizosphere	RPESTLPSVSPAGFARDPQLVWTLREDDWRKRERDSHVTPDDARQRIRNAVDAAQRELRESESPETVEPYPLFLFDRRRRE*
Ga0075428_1006248821	3300006844	Populus Rhizosphere	ELVWTLREDDWRNRVRDPRVSAHDASQRIRTAVEAAKSLLRRSELPETVEPYPLFLFDRRRRE*
Ga0075428_1020519062	3300006844	Populus Rhizosphere	GSSPQGIPRDPESVWTLRKHDWRNRARDPRGSAHDAAQRIRTAVEAVERELRRSDAPETVEPYPLFLFDRRRRE*
Ga0075430_1005190131	3300006846	Populus Rhizosphere	SSPQGIPRDPESVWTLAEHDWRNRARDPHVSARDTAQRIRTAVEAAESELRQSDAPKTVEPYPLFLFDRRRRE*
Ga0075434_1014907081	3300006871	Populus Rhizosphere	KLGARFETTLAVPSPQGIPRDPESVWTLREHDWRNRAHDPRVAAHDAAQRIRTAVEAAESELRRSDAPETVEPYPLFLFDRRRRE*
Ga0075434_1019756862	3300006871	Populus Rhizosphere	REPDWRNRAHNPRVSAEDARQRIRTAVEAAESELRRGEVPETVEPYPLFLFDRRRRE*
Ga0075434_1023088381	3300006871	Populus Rhizosphere	EGIPRDPELVWTLREDDWRNRTRDPRVSAHDARQRIRTAVEEAKSLLRQSELPETVEPYPLFLFDGRRRE*
Ga0079217_105969551	3300006876	Agricultural Soil	LREHDWRNRARDPRVPVHDAAQRIRAAVDAAESELRRSDAPETVEPYPLFLFDRRRRP*
Ga0068865_1008040031	3300006881	Miscanthus Rhizosphere	VWGLREDDWRNRARDPRVSADDARQRLRAAIDAAQRELRRSEAPETVEPYPLFLFDRRRRD*
Ga0079219_116611752	3300006954	Agricultural Soil	ESTRESSSPQGIARDPESVWTLREHDFRNRPHDPRLSSRDTAQRIRTAIEAAASALRRSDVPETVEPYPLFLFDRRRRE*
Ga0075419_111419071	3300006969	Populus Rhizosphere	EFVTEGIPRDPELVWTLREGDWRNRVRDPRVSAHDASQRIRTAVEAAKSLLRRSELPETVEPYPLFLFDRRRRE*
Ga0079218_114081081	3300007004	Agricultural Soil	TLAGSSPQGIPRDPESVWTLRDPDWRNRARDRVSVHDAAQRIRTAVEAAESELRRSEAPETVEPYPLFLFDRRRRE*
Ga0111539_108374352	3300009094	Populus Rhizosphere	RAESSPQGIPRDPESVWTLREQDWRNRAGDSRLSAHDAVQRIRTAVEAAESELRRGDAPETVEPYPLFLFDRRRRE*
Ga0111539_118154851	3300009094	Populus Rhizosphere	LCARFASTLAASSPTGIPRDPESVWTLREDDWRNRATHPRMSADDARRRIRTAIEAAESELRASQAPETVEPYPLFLFDRRRRE*
Ga0105245_107949611	3300009098	Miscanthus Rhizosphere	PRDPELVWTLREEEWRHRTRDPRVSAHDARQRILGAVDAAQSELRRSESPEAVEPYPLFLFDRRRRGE*
Ga0105245_125531682	3300009098	Miscanthus Rhizosphere	SPQGIPRDPESVWTLREQDWRNRARDPGVSAHDAAQRIRTAIEAAESELRRSDAPETVEPYPLFLFDRRRRG*
Ga0114129_106033761	3300009147	Populus Rhizosphere	RFERTLGGSSPLGIPRDPESVWTLRKHDWRNRARDPRGSAHDAAQRIRTAVEAVERELRRSDAPETVEPYPLFLFDRRRRE*
Ga0114129_113992021	3300009147	Populus Rhizosphere	VWTLREHDWRNRARDPRLPANDAAQRIQTAVETVKSALRQSAAPETVEPYPLFLFDRRRRE*
Ga0114129_134254671	3300009147	Populus Rhizosphere	PKGIPRDPELVWTLREDDWRNRARDRRVSTHDASQRIRKAVDAAKSVLRRSELPEIVEPYPLFLFDRRRRE*
Ga0105243_104285792	3300009148	Miscanthus Rhizosphere	REPEWRNLVLAPRVPAHNAAERIRTAVEAAESELRRSEAPETVEPYPLFLFDRRRRE*
Ga0111538_117575301	3300009156	Populus Rhizosphere	IPRDPELVWTLREDDWRNRARDRRVSTHDASQRIRKAVDAAKSVLRRSELPEIVEPYPLFLFDRRRRE*
Ga0111538_124847442	3300009156	Populus Rhizosphere	PESVWTLREHDWRNRTRDPRVSAHDAAQRIRTAVEAAESDLRQSAAPETVEPYPLFLFDRRRRE*
Ga0105241_123249471	3300009174	Corn Rhizosphere	TLESSSDTGIPRDPELVWTLREEEWRHRTRDPRVSAHDARQRILGAVDAAQSELRRSESPEAVEPYPLFLFDRRRRGE*
Ga0105249_120615892	3300009553	Switchgrass Rhizosphere	AAVRRLGARPESTLATVSPTGFPRDPELVWTLREDDWRKRARDSRLSLDDVGQRIRQAVDAAQSELHQSESPETVEPYPLFLFDRRRKE*
Ga0126313_115025821	3300009840	Serpentine Soil	VEQSSPQGIPRDPESVWTMREHDWRNRAPNPRASAHDAPQRIRTAVAAAESVLRQSDAPETVEPYPLFLFDRRRREDSGHG*
Ga0126311_107226992	3300010045	Serpentine Soil	ALHEHDWRSRARDSREAAADAVQRIRAAVQMAESELRQSEAAETVEPYPLFLFDRRRRE*
Ga0126377_109006281	3300010362	Tropical Forest Soil	GSSPKGIPRDPETVWTLRADEWRNRTRHPRVSADDARQRIRTAVEAAESELRRSGAPETVEPYPLFLFDRRRRE*
Ga0134124_105421611	3300010397	Terrestrial Soil	LGARLETTLEQSSPQGIPRDPETVWTLLAHDWRNRARGPRTSVHEAAQRIEMAVEAAESELRRSDAPETVEPYPLFLFDRRRRE*
Ga0134124_112942661	3300010397	Terrestrial Soil	WTLREEEWRHRTRDPRVSAHDAQQRIQGAVEAAQSELRRSESPEAVEPYPLFLFDRRRRGE*
Ga0134127_120504691	3300010399	Terrestrial Soil	DPESVWTLREDDWRNRATHPRMSADDARRRIRTAIEAAESELRASQAPETVEPYPLFLFDRRRRE*
Ga0134122_132309422	3300010400	Terrestrial Soil	RDPELTWNLREDDWRNRVRDPRVSAHDARQRMQTAVEAAERELRQSESPETVEPYPLFMFDRRRRESS*
Ga0134123_128084693	3300010403	Terrestrial Soil	STLEASSPTGIPRDPESVWTLREDDWRNRATHPRMSADDARRRIRTAIEAAESELRASQAPETVEPYPLFLFDRRRRE*
Ga0137312_10406901	3300011400	Soil	KLGARFETTLEGSSPQGIPRDPESVWTLREHEWRSRACEPRASAHDAAQQLRTAVEAAESQLRRSDAPETVEPYPLFLFDRRRRE*
Ga0137454_10973691	3300011406	Soil	KLGARFETTLAGSSPEGIPRDPESVWTLREHDWRNRARDPRVSAHDAAQRIRTAVEAAESELRRSDAPETVEPYPLFLFDRRRRE*
Ga0137432_11360482	3300011439	Soil	IARDPESVWTLREHDWRNRARDPRMSLHDAAQRIRTAVEAAESELRRSEAPEAVEPYPLFLFDRRRRE*
Ga0150985_1043538232	3300012212	Avena Fatua Rhizosphere	TLASSSETGIPRDPELVWTLREEDWLHRTRDPRVSAHDARQRIRKAVEAAQSELRRSEFPETVEPYPLFLFDRRRRE*
Ga0157295_101506571	3300012906	Soil	EHDWRNRTRDPRVSAHDAAQRIRTAVEAAESDLRQSAAPETVEPYPLFLFDRRRRE*
Ga0157301_102896261	3300012911	Soil	SPEGIPRDPQVVWTLREEDWRNRQPDRHPVSAEDARQRIHDAVEAVQSELRRSESPQAVEPYPLFLFDRRRRE*
Ga0157302_103112482	3300012915	Soil	VFALREEDWKNRKRDPRVTAHDVAQRVRKAVEAAEDQLRRSDAPETVEPYPLFLFDRRRRDQG*
Ga0164303_105684893	3300012957	Soil	ESVWILREPEWRNRTRDPRVSADDAAIRIRAAVQAVESELRRSEAPETVEPYPLFLFDRRRRE*
Ga0164299_106601211	3300012958	Soil	LGARFETTLAGSSPQGIPRDPESVWTLREHDWRNRACDPRVSAHDAAQRIRTAVEAAESELRRSDAPETVEPYPLFLFDRRRRE*
Ga0164307_116817651	3300012987	Soil	PESTLATVSPTGFPRDPELVWTLREDDWRKRARDSRLSLDGVGQRIRQAVDAAQCELHQSESPETVEPYPLFLFDRRRKE*
Ga0164305_108436211	3300012989	Soil	GIPRDPELVWTLREDDWRNRARDPRVSAHDARQRIQKAVEAAESVLQRSESPETVEPYPLFLFDRRRRE*
Ga0157374_117671352	3300013296	Miscanthus Rhizosphere	PGSILASSSPKGIPRDPELTWNLREDDWRNRVRDPRVSAHDAAQRIRTAVEAAESELRRSDAPQTVEPYPLFLFDRRRRE*
Ga0157378_126825502	3300013297	Miscanthus Rhizosphere	EDDWRNRARDRRVSTHDASQRIRKAVDAAKSLLRRSELPETVEPYPLFMFDRRRRE*
Ga0157380_124029302	3300014326	Switchgrass Rhizosphere	RDPESVWTLREHDWRNRARDPRVSAHDAVQRIRTAVEAAESELRRSDATETAEPYPLFLFDRRRRE*
Ga0173478_105090261	3300015201	Soil	DPESVWTLRQHDWRNQAHNPRVSARDAAQRIRTAVEAAESELRRSDAPETAEPYPLFLFDRRRRE*
Ga0132256_1012716241	3300015372	Arabidopsis Rhizosphere	FEATLAEPSPQGIPRDPESVWTLREHDWGSRARDPRVSAADAAQRIRTAVEAAESELRRSDAPETVEPYPLFLFDRRRRE*
Ga0132256_1019882922	3300015372	Arabidopsis Rhizosphere	RDPESVWTLREDDWRNRALSPRVSADDARQRIRTAVEAAQSELRRSEAPKTVEPYPLFLFDRRRRDDAAELPA*
Ga0132257_1003244041	3300015373	Arabidopsis Rhizosphere	QGIPRDPESVWTLREHEWRNRARDPRVSPYDATQRIRTAVEAAESELRRSDAPETVEPYPLFLFDRRRRE*
Ga0132257_1040980251	3300015373	Arabidopsis Rhizosphere	ELVWTLREDDWRNRARDSRVSAHDARLRIRRAAQGAKSVLRRSELPETVEPYPLFLFDRRRRE*
Ga0132257_1044096202	3300015373	Arabidopsis Rhizosphere	PEWLWGLRESDWHTRVRDPRVTAPDAVQRVRLAVEAAETELRRSHALETAEPYPLFLFDRRRRE*
Ga0184625_104708101	3300018081	Groundwater Sediment	VQKLGAQFETTLVESSPQGIPRAPESVWILREPDWRNRARDPRVSDHDAAQRVRTAVEAAESELQRSDAPETVEPYPLFMFDRRRRE
Ga0190265_117080721	3300018422	Soil	RFETTLAGSSPQGIPRDPESVWTLREHDWRDRARDPRVSAHDAAQRIRTAVEAAESEVRRSEAPETVEPYPLFLFDRRRRE
Ga0190272_100383881	3300018429	Soil	PQGIPRDPESVWTLREHHWRDRARDPRMSANDAAQRIRTAVEAAESELRRSDAPETVEPYPLFLFDRRRRE
Ga0190272_100592541	3300018429	Soil	KLGARFETTLAGSSPQGIPRDPESVWTLREHDWRDRARDPRVSAHDAAQRIRTAVEAAESEVRRSEAPETVEPYPLFLFDRRRRE
Ga0190272_106402591	3300018429	Soil	LGARFETTLEGSSPLGIPRDPESVWTLREHDWRNRARDSRVSAHDAAQRMRTAVKAAESELRRSDAPETVEPYPLFLFDRRRRE
Ga0190275_132752711	3300018432	Soil	GARFETTLEDSSPLGIARDPESVWTMREHDWRNRAHDSRRSTHDAAQRIRTAIEAAESELRRSDAPETVEPYPLFLFDRRRRE
Ga0190274_115768491	3300018476	Soil	PEGVPRDPESVFGLREHDWRHRALAPRLSAADAAQRIRTAIEATENELRRRDAPETVEPYPLFLFDRRRRE
Ga0190274_138359151	3300018476	Soil	QKLGARFETTLAGSSPQGIPRDPEAVWTLREDDWRNRVRAPRVPAQEAAQRIRTAVEAAESELRRSDAPETVEPYPLFLFDRRRRE
Ga0193726_12982002	3300020021	Soil	QKLGARFETTLVESSPLGIPRAPESVWTLREHDWRNRTRDPRESARDAAQRIRTAVEAAESELRRSEVPETVEPYPLFLFDRRRGK
Ga0193733_10313893	3300020022	Soil	QFETTLAGSSPQGIPRDPESVWTLREHDWRDRARDPRVSAHDAAQRIRTAVEAAESDLRRSDAPETVEPYPLFLFDRRRRE
Ga0196978_10596402	3300021067	Soil	GIARDPESVWGLRESDWRNRIADPRLAAEDAAQRIRQAVESAESELRRREAPGAVEPYPLFLFDRRRRE
Ga0210381_101612032	3300021078	Groundwater Sediment	AVQKLGARFETTLAESSPQGIPRDPESVWTLREHDWRNRARDPRVSAHDAAQRIRTAVEAAESELRRSDAPETVEPYPLFLFDRRRRE
Ga0222622_105761081	3300022756	Groundwater Sediment	TLRELEWRNRPRDPRMSAHDAARRVRTAIEAAESELRRIDVTETVEPYPLFLFDRRRRE
Ga0207682_102790383	3300025893	Miscanthus Rhizosphere	VQKLGSQFETTLAGSSPQGVPRDPESVWMLREHNWRNRARDPRVSADDAAQRIRTAVEAAESELRRSDAPETVEPYPLFLFDRRRRE
Ga0207680_102113121	3300025903	Switchgrass Rhizosphere	SSPKGIPRDPELTWNLREDDWRNRVRDPRVSAHDARQRMQTAVEAAERELRQSESPETVEPYPLFMFDRRRRESS
Ga0207657_110116082	3300025919	Corn Rhizosphere	GIPRDPETVWTVRERDWRDRARHPRVSAEDARHRLRIAVEAADSQLRRGDVPATVEPYPLFLFDRRLRE
Ga0207657_112123652	3300025919	Corn Rhizosphere	REDDWRKRTRDSRRSLDDVGPRIRQAVEAAQSELRQGESPETVEPYPLFLFDRRRKE
Ga0207690_107259182	3300025932	Corn Rhizosphere	KLGARPESTVTTSSEQGIPRDPELVWTLREHEWRNRPHDPRPSADDARQRIQEAVAAAERVLQRSEPAEGVEPYPLFLFDRRRRE
Ga0207704_106656312	3300025938	Miscanthus Rhizosphere	VWGLREDDWRNRARDPRVSADDARQRLRAAIDAAQRELRRSEAPETVEPYPLFLFDRRRR
Ga0207711_106901431	3300025941	Switchgrass Rhizosphere	VTKGIPRDPELTWNLREDDWRNRVRDPRVSAHDARQRMQTAVEAAERELRQSESPETVEPYPLFMFDRRRRESS
Ga0207676_116927941	3300026095	Switchgrass Rhizosphere	EAMLPESSPLGIPRDPESVWTLREHDWRGRARDPRVSAPDAAQRIRTAVEAAESELRRSDAPETVEPYPLFLFDRRRRE
Ga0207675_1003030671	3300026118	Switchgrass Rhizosphere	VQKLGARFESTLASTSPQGIPRDPESVFALREEDWKNRKHDPRVTAHDAAQRVRQAVEAAEDQLRRSDAPETVE
Ga0207675_1027031601	3300026118	Switchgrass Rhizosphere	TTLAVPSPQGIPRDPKSVWSLREHDWRNRTPDPRASAHDAAQRIQAAVEATESELRRIDAPETVEPYPLFLFDRRRRE
Ga0207698_107126602	3300026142	Corn Rhizosphere	QKLGARPESTVTTSSEQGIPRDPELVWTLREHEWRNRPHDPRPSADDARQRIQEAVAAAERVLQRSEPAEGVEPYPLFLFDRRRRE
Ga0209814_100559741	3300027873	Populus Rhizosphere	PESVWALREHDWRNRVCDPRESAHDAAQRMRTAIEAAESELRQSEAPETVEPYPLFLFDRRRRE
Ga0268265_111824663	3300028380	Switchgrass Rhizosphere	LAGSSPLDIPRDPESVWTLREHDWRNRAREPRVSAHDAAQRIRTAVQAAESELRRSDAPETVEPYPLFLFDRRRRE
Ga0307280_101453722	3300028768	Soil	ETTLARSSPEGIPRDPESVWTLREHDWRNRTRDPRVSAHDAAQRIRTAVEAAESEVRRSDAPETVEPYPLFLFDRRRRE
Ga0307286_101140931	3300028876	Soil	QKLGARFETTLAGTSPQGIPRDPELVWSLREHDWRNRTLDPRASAHDAAQRIRTAVEAAESELRRIDAPETVEPYPLFLFDRRRRE
Ga0299914_101711421	3300031228	Soil	ESVWTLREHDWRNRARDPRVSAHDVAQRIRTAVEAAESELRRRDAPETVEPYPLFLFDRRRRE
Ga0310888_102553902	3300031538	Soil	ESTLAESSPQGIPRDPESVWTLREPEWRNLVRAPRVSAHDAAERIRRAVEAAESELRRSEAPETVEPYPLFLFDRRRRE
Ga0310887_111177662	3300031547	Soil	KLGARFETTLVESSPQGIPRDPESVWTLREHDWRDRARDPHVSAHDTAQRIRTAVEAAESELRRGDAPETVEPYPLFLFDRRRRE
Ga0307413_105305881	3300031824	Rhizosphere	ESATPEGVPRDPESVFGLREHDWRQRAQLPRSSAEAVAQRIQAAVEAAQRELRRSETPETLEPYPLFLFDRRRRE
Ga0318512_102433231	3300031846	Soil	VWTLREDDWRNRERDSHVSADEARERIRKAVEAAQGELRRSESPETVDPYPLFLFDRRRREAGKENT
Ga0310907_108640451	3300031847	Soil	AMRKIGARFESTLESSSPEGTPRDPESVFSLREHDWRHRARDARVPADDAAQRIRTAIEAAKSQLRRSDAPETVEPYPLFLFDRRRRE
Ga0310904_100796262	3300031854	Soil	FETTLTESSPQGIPRDPESVWTLREHDWRNRAGDPRVSAHDAAQRIRTAVEAAEGQLRRSAAPETVEPYPLFLFDRRRRE
Ga0310904_107962711	3300031854	Soil	VQKLGARFETTLAGSSPQGIPRDPESVWTLREHDWRNRAHDPRVSAHDAAQRIRMAVEAAESELRRSDAPETVEPYPLFLFDRRRRE
Ga0310892_103991621	3300031858	Soil	SESTLASSSQQGIPRDPELVWTLREDDWRNRARDPRVSAHDARQRIRTAVEATKSLLRRSALPETVEPYPLFLFDRRRRE
Ga0310901_102816792	3300031940	Soil	LAASSPTGIPRDPESVWTLREDDWRNRATHPRMSADDARRRIRTAIEAAESELRASQAPETVEPYPLFLFDRRRRE
Ga0310903_101337482	3300032000	Soil	GARFETTLVESSPQGIPRDPESVWTLREHDWRDRARDPHVSAHDTAQRIRTAVEAAESELRRGDAPETVEPYPLFLFDRRRRE
Ga0310899_103531911	3300032017	Soil	LSSPQGIPRDPESVWTLREHDWRNRAHDPRVSAHDAAQRIRTAVEAAESELRRSDAPETVEPYPLFLFDRRRRE
Ga0310890_102053431	3300032075	Soil	ARFETTLARSSPQGIPRDPESVWTLREHDWRNQAREPRVSADDAAQRIRTAVEAAESELRRSEAPETVEPYPLFLFDRRRRE
Ga0310889_105109381	3300032179	Soil	TTSPEGIPRDPQVVWTLREQDWRNRQPDRHPVSAEDARQRIHDAVEAAQSELRRSESPEAVEPYPLFLFDRRRRE
Ga0310896_100214721	3300032211	Soil	PESVWTLREHDWRNRTRDPRVSAHDAAQRIRTAVEAAESDLRQSAAPETVEPYPLFLFDRRRRE
Ga0310812_100970601	3300032421	Soil	HAAVRRLGASAESTLETMSPMGLPRDPQLVWTLREGDWRKRTPDPRVSRADVRERIRHAVEAAHGELRRSESPQTVEPYPLFLFDRRRRE
Ga0310914_112246442	3300033289	Soil	TLREDDWRNRERDSHVSADEARERIRKAVEAAQGELRRSESPETVDPYPLFLFDRRRREAGKENT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F068953

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences