Metagenome / Metatranscriptome Family F068922

Basic Information
Family ID	F068922
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	41 residues
Representative Sequence	MYNYWIVSAEVTLIVISASTSECKETFTLNFPKDLISSTG
Number of Associated Samples	106
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	85.48 %
% of genes near scaffold ends (potentially truncated)	96.77 %
% of genes from short scaffolds (< 2000 bps)	93.55 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.27

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (91.935 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (16.936 % of family members)
Environment Ontology (ENVO)	Unclassified (59.677 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (85.484 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58. 1DelMOWin2010_101326401 2SI54feb11_100mDRAFT_10341222 3LP_F_10_SI03_100DRAFT_10044193 4BBAY92_100989201 5BBAY94_101001921 6JGI20151J14362_101208501 7JGI20157J14317_100071701 8JGI20157J14317_101397051 9JGI20159J14440_100571501 10JGI20159J14440_101617342 11GOS2218_10215212 12JGI24540J26637_100854841 13Ga0068495_11908752 14Ga0115011_113221521 15Ga0115000_102377254 16Ga0163110_109740341 17Ga0163108_103594682 18Ga0181398_11302042 19Ga0181431_11579182 20Ga0181402_11937961 21Ga0181400_11462032 22Ga0181422_11195531 23Ga0181386_11176622 24Ga0181395_11404671 25Ga0181380_11582851 26Ga0181380_12383471 27Ga0181424_104497902 28Ga0181552_100937911 29Ga0181552_103714461 30Ga0181607_106019251 31Ga0181585_103127241 32Ga0181558_106315942 33Ga0181567_103869391 34Ga0181564_103547581 35Ga0182073_14400211 36Ga0194023_11062461 37Ga0181555_10856382 38Ga0181595_104225072 39Ga0206125_100049711 40Ga0206129_101861252 41Ga0181605_103904422 42Ga0181570_104762932 43Ga0181570_105703062 44Ga0211683_100835712 45Ga0211516_100870772 46Ga0211516_105018642 47Ga0211528_102969571 48Ga0211521_104490932 49Ga0211576_105385892 50Ga0211574_103743271 51Ga0211641_102999592 52Ga0211545_104673201 53Ga0211643_106481282 54Ga0211514_103801282 55Ga0211514_104738122 56Ga0211514_105987661 57Ga0211676_105683851 58Ga0206678_102471081 59Ga0206677_102281382 60Ga0213862_102157292 61Ga0213859_102004901 62Ga0213860_104040232 63Ga0213869_101676511 64Ga0213868_103792591 65Ga0222717_107065101 66Ga0222716_102801232 67Ga0222716_104606611 68Ga0255773_103312861 69Ga0233427_100255681 70Ga0233427_100354301 71Ga0255754_100661873 72Ga0255754_101947572 73Ga0255784_102501082 74Ga0255761_104151321 75Ga0255759_106260382 76Ga0233399_11146871 77Ga0233439_103989211 78Ga0228661_11145961 79Ga0233451_100448401 80Ga0233451_102168941 81Ga0233449_11659332 82Ga0233400_10879062 83Ga0228626_10328272 84Ga0233443_11542272 85Ga0228672_11858622 86Ga0233447_10127301 87Ga0233447_10920601 88Ga0244775_110959412 89Ga0233396_11496491 90Ga0209046_10238881 91Ga0209142_10775932 92Ga0209658_10317002 93Ga0209263_11273972 94Ga0209095_11151621 95Ga0209505_10948452 96Ga0209660_12412001 97Ga0209308_101687902 98Ga0209308_102036832 99Ga0209308_103674491 100Ga0209223_104275632 101Ga0209534_104424831 102Ga0209309_101682712 103Ga0209632_101050661 104Ga0209632_101112001 105Ga0208766_11676892 106Ga0208277_12414322 107Ga0228641_10236552 108Ga0208796_11198451 109Ga0209433_103506752 110Ga0209091_103386181 111Ga0228648_10503371 112Ga0228645_10303551 113Ga0228609_11440741 114Ga0228640_10927212 115Ga0228613_11248251 116Ga0233394_10334431 117Ga0308001_101290341 118Ga0310343_108182552 119Ga0315320_102518792 120Ga0315320_105699431 121Ga0315320_110055972 122Ga0315316_116464991 123Ga0315330_107763712 124Ga0315315_107454812
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58. 1DelMOWin2010_101326401 2SI54feb11_100mDRAFT_10341222 3Ga0068495_11908752 4Ga0115000_102377254 5Ga0163110_109740341 6Ga0163108_103594682 7Ga0211683_100835712 8Ga0211528_102969571 9Ga0211545_104673201 10Ga0209263_11273972 11Ga0209091_103386181 12Ga0310343_108182552
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40 1Ga0315320_110055972 2LP_F_10_SI03_100DRAFT_10044193 3JGI20159J14440_100571501 4Ga0068495_11908752 5Ga0115000_102377254 6Ga0163110_109740341 7Ga0163108_103594682 8Ga0181402_11937961 9Ga0211683_100835712 10Ga0211528_102969571 11Ga0211574_103743271 12Ga0211641_102999592 13Ga0211545_104673201 14Ga0211514_105987661 15Ga0213860_104040232 16Ga0222716_102801232 17Ga0233427_100354301 18Ga0233451_102168941 19Ga0209091_103386181 20Ga0308001_101290341 21Ga0310343_108182552 22Ga0315316_116464991 23Ga0315315_107454812
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Neighboring Clusters of Orthologous Genes (COGs)

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 5.88% β-sheet: 27.94% Coil/Unstructured: 66.18%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.27
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.27
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Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF00772	DnaB	64.52
PF03796	DnaB_C	29.84
PF03176	MMPL	2.42
PF04107	GCS2	0.81
PF13561	adh_short_C2	0.81
PF13537	GATase_7	0.81
PF01084	Ribosomal_S18	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG0305	Replicative DNA helicase	Replication, recombination and repair [L]	94.35
COG1066	DNA repair protein RadA/Sms, contains AAA+ ATPase domain	Replication, recombination and repair [L]	29.84
COG1033	Predicted exporter protein, RND superfamily	General function prediction only [R]	2.42
COG2409	Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamily	General function prediction only [R]	2.42
COG0238	Ribosomal protein S18	Translation, ribosomal structure and biogenesis [J]	0.81

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	8.06 %
Unclassified	root	N/A	91.94 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	8.06 %
Unclassified	root	N/A	91.94 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	8.06 %
Unclassified	root	N/A	91.94 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	8.06 %
Unclassified	root	N/A	91.94 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	8.06 %
Unclassified	root	N/A	91.94 %

Name	Rank	Taxonomy	Distribution
Pelagibacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales	8.06 %
Unclassified	root	N/A	91.94 %

Name	Rank	Taxonomy	Distribution
Pelagibacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae	8.06 %
Unclassified	root	N/A	91.94 %

Name	Rank	Taxonomy	Distribution
Candidatus Pelagibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	8.06 %
Unclassified	root	N/A	91.94 %

Name	Rank	Taxonomy	Distribution
Candidatus Pelagibacter ubique	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2.42 %
Unclassified	root	N/A	91.94 %
unclassified Candidatus Pelagibacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter	1.61 %

Name	Rank	Taxonomy	Distribution
Candidatus Pelagibacter sp. HTCC7211	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. HTCC7211	1.61 %
Candidatus Pelagibacter ubique	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2.42 %
Unclassified	root	N/A	91.94 %

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
(restricted) 3300022933\|Ga0233427_10025568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	3511	Open in IMG/M
(restricted) 3300022933\|Ga0233427_10035430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → Candidatus Pelagibacter ubique	2814	Open in IMG/M
(restricted) 3300024261\|Ga0233439_10398921	Not Available	564	Open in IMG/M
(restricted) 3300024302\|Ga0233449_1165933	Not Available	714	Open in IMG/M
(restricted) 3300024324\|Ga0233443_1154227	Not Available	836	Open in IMG/M
(restricted) 3300024336\|Ga0233447_1012730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter	3742	Open in IMG/M
(restricted) 3300024336\|Ga0233447_1092060	Not Available	903	Open in IMG/M
3300000117\|DelMOWin2010_c10132640	Not Available	850	Open in IMG/M
3300000158\|SI54feb11_100mDRAFT_c1034122	Not Available	760	Open in IMG/M
3300000257\|LP_F_10_SI03_100DRAFT_1004419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Pelagibacterales → Pelagibacteraceae → Candidatus Pelagibacter → unclassified Candidatus Pelagibacter → Candidatus Pelagibacter sp. HTCC7211	3474	Open in IMG/M

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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.39%
Host-Associated	Host-Associated	1.61%

Habitat	Taxonomy	Distribution
Algae	Host-Associated → Algae	1.61%
Aquatic	Environmental → Aquatic	98.39%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	0.81%
Green Algae	Host-Associated → Algae → Green Algae	1.61%
Marine	Environmental → Aquatic → Marine	97.58%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	14.52%
Ectosymbionts	Host-Associated → Algae → Green Algae → Ectosymbionts	1.61%
Inlet	Environmental → Aquatic → Marine → Inlet	5.65%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	29.03%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	8.06%
Oceanic	Environmental → Aquatic → Marine → Oceanic	9.68%
Pelagic	Environmental → Aquatic → Marine → Pelagic	6.45%
River	Environmental → Aquatic → Freshwater → River	0.81%
Strait	Environmental → Aquatic → Marine → Strait	8.06%
Unclassified	Environmental → Aquatic → Marine → Unclassified	16.13%

Habitat	Taxonomy	Distribution
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.81%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	3.23%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	16.94%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	16.13%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	14.52%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	11.29%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	8.06%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	8.06%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	6.45%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	6.45%
Unclassified	Environmental → Aquatic → Marine → Inlet → Unclassified	5.65%
Unclassified	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified	1.61%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.81%
Estuarine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine	0.81%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	2.42%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.81%
Macroalgal Surface	Host-Associated → Algae → Green Algae → Ectosymbionts → Unclassified → Macroalgal Surface	1.61%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	12.10%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	5.65%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	4.84%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	1.61%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	0.81%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	0.81%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	7.26%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	4.84%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	16.94%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	14.52%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	8.06%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	6.45%
Seawater	Environmental → Aquatic → Marine → Inlet → Unclassified → Seawater	5.65%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	1.61%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.81%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	0.81%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	0.81%

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000117	Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010	Environmental	Open in IMG/M
3300000158	Marine microbial communities from expanding oxygen minimum zones in the Saanich Inlet - 54 02/08/11 100m	Environmental	Open in IMG/M
3300000257	Marine microbial communities from expanding oxygen minimum zones in Line P, North Pacific Ocean - sample_F_10_SI03_100	Environmental	Open in IMG/M
3300000947	Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY92	Host-Associated	Open in IMG/M
3300000949	Macroalgal surface ecosystem from Botany Bay, Sydney, Australia - BBAY94	Host-Associated	Open in IMG/M
3300001346	Pelagic Microbial community sample from North Sea - COGITO 998_met_01	Environmental	Open in IMG/M
3300001352	Pelagic Microbial community sample from North Sea - COGITO 998_met_07	Environmental	Open in IMG/M
3300001353	Pelagic Microbial community sample from North Sea - COGITO 998_met_09	Environmental	Open in IMG/M
3300001947	Marine microbial communities from the Gulf of Maine, Canada - GS002	Environmental	Open in IMG/M
3300002153	Marine eukaryotic phytoplankton communities from the Norwegian Sea - 20m ARK-7M Metagenome	Environmental	Open in IMG/M

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Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOWin2010_101326401	3300000117	Marine	MYNYWIVSAEVTFTVISASTSECKETFTLNFPKDLISSTG
SI54feb11_100mDRAFT_10341222	3300000158	Marine	MYNYWIVSADETLIVISASTSECKEILTLNFPKDFISSTGCIIDG
LP_F_10_SI03_100DRAFT_10044193	3300000257	Marine	MYNYWIVSADETLIVISASTSECREIFTLNFPKDLISSTGCIIEGLISILFSS*
BBAY92_100989201	3300000947	Macroalgal Surface	MYNYWIVSADETLIVISASTSECNETFTLNFPKALISSTGCIIEGLI
BBAY94_101001921	3300000949	Macroalgal Surface	MYNYWIVSADETLIVISASTSECNETFTLNFPKALISSTGCIIEGLISIL
JGI20151J14362_101208501	3300001346	Pelagic Marine	MYNYWIVSAEETLIVISTSTSECKETFTLNLPKALISSTGCIIDGLISI
JGI20157J14317_100071701	3300001352	Pelagic Marine	MYNYWIVSAEETLIVISASTSECKETFTLNLPKALISSTGCIIDGLISILFS
JGI20157J14317_101397051	3300001352	Pelagic Marine	MYNYWIVSADETLIVISASTSECKETFTLNLPKALISSTGCIIDGLIS
JGI20159J14440_100571501	3300001353	Pelagic Marine	MYNYCIVSAEVTLTVISASTSECKEIFTLNFPRDLISSTGCIIEGL
JGI20159J14440_101617342	3300001353	Pelagic Marine	MYNY*MVSAEVTLTVISASTSECKETFTLNFPKDLIS
GOS2218_10215212	3300001947	Marine	MYNYWIVSVDETLIVISASTSECKETFTLNLPKALISSTGCIIEGLISI
JGI24540J26637_100854841	3300002153	Marine	MYNY*IVSAEVTLIVISASTSECRETLTLNFPKDLISSIG
Ga0068495_11908752	3300006337	Marine	MYNY*IVSAEDTLIIISASTSESKEILTLNFPKAFISLDY
Ga0115011_113221521	3300009593	Marine	VYNYWIVSADVTLIVISASTSECKETLTLNFPKDLISSTGCIIEGLMSTLFSS*
Ga0115000_102377254	3300009705	Marine	MVSAEVTLIVISASTSECRETLTLNFPNDLISSTGCIIEGLTSILFSS*
Ga0163110_109740341	3300012928	Surface Seawater	MLWKKLYNYWIVSAETTLIVIRASTSECKEINTSKLP
Ga0163108_103594682	3300012950	Seawater	VSADVTLIIISASTSECKEIFTLNLPKDLISSTGCIID
Ga0181398_11302042	3300017725	Seawater	MYNYCIVSADVTLIVISASTSECKETLTLNFPKDL
Ga0181431_11579182	3300017735	Seawater	MYNYCIVSAEVTFTVISASTSECRETFTLNFPNDLISSTGCIIEGF
Ga0181402_11937961	3300017743	Seawater	MYNYWIVSADETSIEISASTSECREILTLNFPKALISSRGCIIEGFMS
Ga0181400_11462032	3300017752	Seawater	MYNYWIVSAEVTLTVISASTSECKETFTLNFPKDLISST
Ga0181422_11195531	3300017762	Seawater	MYNYWIVSAEVTFTVISASTSECKETFTLNFPKDLIS
Ga0181386_11176622	3300017773	Seawater	MYNYWIVSAEVTLTVISASTSECKEIFTLNFPKDLISSTG
Ga0181395_11404671	3300017779	Seawater	MYNYCIVSAEVTLTVISASTSECKETFTLNFPKDLISSTGCIIEGLI
Ga0181380_11582851	3300017782	Seawater	MYNYCIVSAEVTLTVISASTSECKETFTLNFPKDLIS
Ga0181380_12383471	3300017782	Seawater	MYNYCIVSAEVTLTVISASTSECKEIFTLNFPKDLI
Ga0181424_104497902	3300017786	Seawater	MYNYWIVSAEVTLTVISASTSECKETFTLNFPKDLI
Ga0181552_100937911	3300017824	Salt Marsh	MYNYWIVSAEVTLIVISASTSECKETFTLNFPKDLIS
Ga0181552_103714461	3300017824	Salt Marsh	MYNYCIVSAEVTFTVISASTSECKETFTLNFPKDLISSIGCIIEGL
Ga0181607_106019251	3300017950	Salt Marsh	MYNYXMVSAEVTLTVISASTSECKETFTLNFPKDLIS
Ga0181585_103127241	3300017969	Salt Marsh	MYNYWIVSADVTLTTISASTSECKEILTLNFPKDLISSTG
Ga0181558_106315942	3300018417	Salt Marsh	MYNYCIVSAEVTFTVISASTSECKETFTLNFPKDLISS
Ga0181567_103869391	3300018418	Salt Marsh	MYNYWIVSAEVTLTVISASTSECKETLTLNFPKDLISSFGCIIDG
Ga0181564_103547581	3300018876	Salt Marsh	MYNYWIVSAEVTFTVISASTSECKETFTLNFPKDLISST
Ga0182073_14400211	3300019274	Salt Marsh	MYNYXMVSAEVTLIVISASTSECRETFTLNFPKDLISSTG
Ga0194023_11062461	3300019756	Freshwater	MYNYXMVSAEVTLTVISASTSECKETFTLNFPKDL
Ga0181555_10856382	3300020051	Salt Marsh	MYNYWIVSAEVTLIVISASTSECKETFTLNFPKDL
Ga0181595_104225072	3300020053	Salt Marsh	MYNYCIVSAEVTLTVISASTSECKETFTLNFPKDLISS
Ga0206125_100049711	3300020165	Seawater	MYNYWIVSAEETLIVISASTSECKETFTLNLPKALISSSGCIIDGL
Ga0206129_101861252	3300020182	Seawater	MYNYWIVSADKTLIVISASTSECKETFTLNLPKALI
Ga0181605_103904422	3300020188	Salt Marsh	MYNYXMVSAEVTLTVISASTSECKETFTLNFPRDL
Ga0181570_104762932	3300020207	Salt Marsh	MYNYWIVSAEVTLTVISASTSECKETFTLNFPKDL
Ga0181570_105703062	3300020207	Salt Marsh	MYNYCIVSAEVTFTVISASTSECKETFTLNFPKDLISSIGCII
Ga0211683_100835712	3300020372	Marine	MLGKKLYNYWIVSAESTLTVISASTSECKDTLTLNFPKDFISWTGCIIEGLTSI
Ga0211516_100870772	3300020413	Marine	MYNYXIVSAEDTSIEISASTSECREILTLNFPKALISS
Ga0211516_105018642	3300020413	Marine	MYNYXIVSAEETCIEISASTSECREILTLNFPKALISS
Ga0211528_102969571	3300020417	Marine	MYNYCIVSAEVTLIVISESTSECKETFTLNFPRAFISFKGCIKDGFIS
Ga0211521_104490932	3300020428	Marine	MYNYWIVSADVTLIVISASTSECKETFTLNFPKDLISSTG
Ga0211576_105385892	3300020438	Marine	MYNYCIVSAEVTLTVISASTSECKEIFTLNFPRDLISSTGCIIEGLIL
Ga0211574_103743271	3300020446	Marine	MILYNYWIFSAEFTFIIISASTSECKEIFTLNFPKDFISLTGCIIEG
Ga0211641_102999592	3300020450	Marine	MYNYXIVSAEETLMVISASTSECKEILTLNFPNAFIS
Ga0211545_104673201	3300020452	Marine	MYNYXIVSADETTIVISASTSECKEIFTLNLPRALIS
Ga0211643_106481282	3300020457	Marine	MYNYWIVSAEVTFIVISASTSECKEIFTLNFPKDLISST
Ga0211514_103801282	3300020459	Marine	MYNYCIVSAEVTLIVISASTSECKETFTLNFPKDLISS
Ga0211514_104738122	3300020459	Marine	MYNYWIVSADETLIVISASTSECKETFTLNFPKDLISSTGCIIEGLISI
Ga0211514_105987661	3300020459	Marine	MYNYXIISAEETFIEISASTSECKEILTLNFPRAL
Ga0211676_105683851	3300020463	Marine	MYNYWIVSAEETSIDISASTSECREILTLNFPKALISSTGCII
Ga0206678_102471081	3300021084	Seawater	MYNYWIVSADETLIVISASTSECRDIFTLNFPKDLISSAGCIIEGL
Ga0206677_102281382	3300021085	Seawater	MYNYWIVSADVTLIVISASTSECKETFTLNLPKDLISSTGCIIEGLISI
Ga0213862_102157292	3300021347	Seawater	MYNYWIVSAEVTLTVISASTSECKEIFTLNFPKDLISSTGCIIEG
Ga0213859_102004901	3300021364	Seawater	MYNYWIVSAEVTFTVISASTSECKETFTLNFPKDLISSTGCILH
Ga0213860_104040232	3300021368	Seawater	MYNYWIVSADVTLTTISASTSECKEILTLNFPKDLISSTGCIIEGLSY
Ga0213869_101676511	3300021375	Seawater	MYNYWIVSAEETLIVISASTSECKETFTLNLPKALISS
Ga0213868_103792591	3300021389	Seawater	MYNYXMVSAEVTLTVISASTSECKETFTLNFPKDLI
Ga0222717_107065101	3300021957	Estuarine Water	MYNYWIVSADDTLIVISASTSECKEIFTLNFPKDLISSIG
Ga0222716_102801232	3300021959	Estuarine Water	MYNYWIVSADETLTVISASTSECKETFTLNLPKALISSTGC
Ga0222716_104606611	3300021959	Estuarine Water	MYNYWIVSADVTLIVISASTSECKETFTLNFPKDLISSTGCIIEGL
Ga0255773_103312861	3300022925	Salt Marsh	MYNYWIVSAEVTLIVILASTSECKETFTLNFPKDLISST
(restricted) Ga0233427_100255681	3300022933	Seawater	MYNYWIVSADVTLIVISASTSECKETFTLNFPKDLISSTGCIIG
(restricted) Ga0233427_100354301	3300022933	Seawater	NYWMVSADFTLIVISASTSECRETLTLNFPKDLISSIGCIIDGLTSILFSS
Ga0255754_100661873	3300022939	Salt Marsh	MYNYWIVSADVTLTTISASTSECKEILTLNFPKDLISSTGCIIEG
Ga0255754_101947572	3300022939	Salt Marsh	MYNYCIVSAEVTLTVISASTSECKETFTLNFPKDLISST
Ga0255784_102501082	3300023108	Salt Marsh	MYNYWIVSAEVTLTVISASTSECKETLTLNFPKDLISS
Ga0255761_104151321	3300023170	Salt Marsh	MYNYWIVSAEVTLTVISASTSECKETFTLNFPKDLISS
Ga0255759_106260382	3300023178	Salt Marsh	MYNYWIVSADATLTTISASTSECKEIFTLNFPKDLISSTGCIIEGLI
Ga0233399_11146871	3300024231	Seawater	MYNYWIVSAEVTLTVISASTSECKETFTLNFPNDLISSTGCIIEG
(restricted) Ga0233439_103989211	3300024261	Seawater	MYNYWIVSAEVTLTVISASTSECKETFTLNFPNDLISSTGCIIEGLIS
Ga0228661_11145961	3300024266	Seawater	MYNYWIVSAEVTLTVISASTSECKETLTLNFPKDLISST
Ga0233451_100448401	3300024301	Salt Marsh	MYNYCIVSAEVTLTVISASTSECKETFTLNFPKDL
Ga0233451_102168941	3300024301	Salt Marsh	MYNYCIVSAEVTFTVISASTSECKETFTLNFPKDLISSIGC
(restricted) Ga0233449_11659332	3300024302	Seawater	MYNYWIVSADVTLIVISASTSECKEIFTLNLPKDLISSTGCIIE
Ga0233400_10879062	3300024318	Seawater	MYNYWIVSAEVTLTVISASTSECKEIFTLNFPRDLISS
Ga0228626_10328272	3300024321	Seawater	MYNYWIVSAEVTFTVISASTSECKETFTLNFPKDLISSTGCII
(restricted) Ga0233443_11542272	3300024324	Seawater	MYNYWIVSAEETLIVISASTSECRDIFTLNFPKDLIS
Ga0228672_11858622	3300024335	Seawater	MYNYWIVSAEVTFTVISASTSECKETFTLNFPKDLISSIGCIIEGLISTL
(restricted) Ga0233447_10127301	3300024336	Seawater	MYNYWIVSADVTLIVISASTSECKETFTLNLPKDLIS
(restricted) Ga0233447_10920601	3300024336	Seawater	MYNYWIVSADVTLIVISASTSECKETFTLNLPKDLISSTGCIIEGLISIL
Ga0244775_110959412	3300024346	Estuarine	MYNYWIVSAEETLIVISASTSECKETFTLNLPKALISSIGCII
Ga0233396_11496491	3300024428	Seawater	MYNYWIVSAEVTLTVISASTSECKEIFTLNFPRDL
Ga0209046_10238881	3300025452	Marine	MYNYWIVSADVTLIVISASTSECKETFTLNLPKDLI
Ga0209142_10775932	3300025545	Marine	MYNYWIVSADETLIVISASTSECRDIFTLNFPKDL
Ga0209658_10317002	3300025592	Marine	MYNYWIVSADETLIVISASTSECRDIFTLNFPKDLISSIGCI
Ga0209263_11273972	3300025681	Marine	MYNYWIVSADVTLIVISASTSECRDIFTLNFPKDL
Ga0209095_11151621	3300025685	Pelagic Marine	MYNYCIVSAEVTLTVISASTSECKEIFTLNFPRDL
Ga0209505_10948452	3300025690	Pelagic Marine	MYNYWIVSAEETLIVISASTSECKETFTLNLPKALISSTGCII
Ga0209660_12412001	3300025722	Marine	MYNYWIVSADETLIVISASTSECKEILTLNFPKDFI
Ga0209308_101687902	3300025869	Pelagic Marine	MYNYWMVSADETLIVISASTSECKETFTLNLPKALISSTGCII
Ga0209308_102036832	3300025869	Pelagic Marine	MYNYCIVSAEVTLTVISASTSECKETFTLNFPKDLISSTG
Ga0209308_103674491	3300025869	Pelagic Marine	MYNYWIVSADETLIVISASTSECNETFTLNLPKALISSTGCIIE
Ga0209223_104275632	3300025876	Pelagic Marine	MYNYWIVSAEETLIVISASTSECKETLTLNLPKALISST
Ga0209534_104424831	3300025880	Pelagic Marine	MYNYWIVSAEETLIVISASTSECKETFTLNFPKDLISSM
Ga0209309_101682712	3300025881	Pelagic Marine	MYNYWIVSAEETLIVISASTSECKETFTLNFPKDLI
Ga0209632_101050661	3300025886	Pelagic Marine	MYNYWIVSAEETLIVISASTSECKETFTLNLPKALISST
Ga0209632_101112001	3300025886	Pelagic Marine	MYNYYWIVSAEVTLTLISASTSECKETFTLNFPKDLISST
Ga0208766_11676892	3300026269	Marine	MYNYWIVSAEVTLIVISASTSECKEILTINLPKALI
Ga0208277_12414322	3300026292	Marine	MYNYXIVSADVTLIVISASTSECKETFTLNFPKDL
Ga0228641_10236552	3300026491	Seawater	MYNYWIVSAEVTLTVISASTSECKEIFTLNFPRDLISSTGCIIEGLI
Ga0208796_11198451	3300027308	Estuarine	MYNYWIVSADVTLIVISASTSECKEIFTLNLPKDLISS
Ga0209433_103506752	3300027774	Marine	MYNYXIVSAEETLTVISASTSECREILTLNFPKAF
Ga0209091_103386181	3300027801	Marine	MLGKKLYNYWIVSAVITLIVISESISECRMIFTLNFPIDLISVIGCIIEGLISSL
Ga0228648_10503371	3300028126	Seawater	MYNYWIVSAEVTFTVISASTSECKETFTLNFPKDLISSIGCIIEGLIS
Ga0228645_10303551	3300028128	Seawater	MYNYWIVSAEVTLTVISASTSECKETFTLNFPKDF
Ga0228609_11440741	3300028133	Seawater	MYNYCIVSAEVTLTVISASTSECKEIFTLNFQRDLISSTG
Ga0228640_10927212	3300028273	Seawater	MYNYWIVSAEVTLTVISASTSECKETFTLNFPKDLISSTGCIIEGLI
Ga0228613_11248251	3300028279	Seawater	MYNYCIVSAEVTLTVISASTSECKETFTLNFPKDLISSTGLIIDG
Ga0233394_10334431	3300028391	Seawater	MYNYWIVSAEVTFTVISASTSECKETFTLNFPKDLISSIGCIIEGLI
Ga0308001_101290341	3300031644	Marine	MLGKKLYNYWIVSEVITLIVISESTSECKVTFTLNLPSDLISVIGCIIEGFI
Ga0310343_108182552	3300031785	Seawater	MYNYCIVSAEDTFIVTSASTSECKEILTLNFPKAFISSTGCIIEGFMSILLTS
Ga0315320_102518792	3300031851	Seawater	MYNYCIVSAEVTLTVISASTSECKETFTLNLPKDLI
Ga0315320_105699431	3300031851	Seawater	MYNYWIVSAEVTLTVISASTSECNETFTLNFPKDL
Ga0315320_110055972	3300031851	Seawater	MYNYWIVSAEVTLIVISASTSECKETFTLNFPKDLISSTG
Ga0315316_116464991	3300032011	Seawater	MYNYWIVSAEVTLIVISASTSECKEILTINLPKALIS
Ga0315330_107763712	3300032047	Seawater	MYNYWIVSAEVTLTVISASTSECKEIFTLNFPKDLISSTGCIIE
Ga0315315_107454812	3300032073	Seawater	MYNYWIVSAEETLIVISASTSECKDILTLNFPKDLISSTGCIIEGLISILFSS

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters