Basic Information | |
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Family ID | F068922 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 124 |
Average Sequence Length | 41 residues |
Representative Sequence | MYNYWIVSAEVTLIVISASTSECKETFTLNFPKDLISSTG |
Number of Associated Samples | 106 |
Number of Associated Scaffolds | 124 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Unclassified |
% of genes with valid RBS motifs | 85.48 % |
% of genes near scaffold ends (potentially truncated) | 96.77 % |
% of genes from short scaffolds (< 2000 bps) | 93.55 % |
Associated GOLD sequencing projects | 102 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.27 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Unclassified (91.935 % of family members) |
NCBI Taxonomy ID | N/A |
Taxonomy | N/A |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (16.936 % of family members) |
Environment Ontology (ENVO) | Unclassified (59.677 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Saline → Water (saline) (85.484 % of family members) |
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Full Alignment |
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Alignment of all the sequences in the family. |
IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58. |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | Yes | Secondary Structure distribution: | α-helix: 5.88% β-sheet: 27.94% Coil/Unstructured: 66.18% |
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Position : 0 Zoom : x 1 Enter the variants Position Original Variant |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.27 |
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Visualization |
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All Organisms Unclassified |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
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Visualization |
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Freshwater Marine Seawater Marine Surface Seawater Seawater Seawater Seawater Marine Seawater Estuarine Salt Marsh Marine Marine Estuarine Estuarine Water Pelagic Marine Seawater Pelagic Marine Marine Seawater Macroalgal Surface |
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Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Geographical Distribution | |
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Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).
Protein ID | Sample Taxon ID | Habitat | Sequence |
DelMOWin2010_101326401 | 3300000117 | Marine | MYNYWIVSAEVTFTVISASTSECKETFTLNFPKDLISSTG |
SI54feb11_100mDRAFT_10341222 | 3300000158 | Marine | MYNYWIVSADETLIVISASTSECKEILTLNFPKDFISSTGCIIDG |
LP_F_10_SI03_100DRAFT_10044193 | 3300000257 | Marine | MYNYWIVSADETLIVISASTSECREIFTLNFPKDLISSTGCIIEGLISILFSS* |
BBAY92_100989201 | 3300000947 | Macroalgal Surface | MYNYWIVSADETLIVISASTSECNETFTLNFPKALISSTGCIIEGLI |
BBAY94_101001921 | 3300000949 | Macroalgal Surface | MYNYWIVSADETLIVISASTSECNETFTLNFPKALISSTGCIIEGLISIL |
JGI20151J14362_101208501 | 3300001346 | Pelagic Marine | MYNYWIVSAEETLIVISTSTSECKETFTLNLPKALISSTGCIIDGLISI |
JGI20157J14317_100071701 | 3300001352 | Pelagic Marine | MYNYWIVSAEETLIVISASTSECKETFTLNLPKALISSTGCIIDGLISILFS |
JGI20157J14317_101397051 | 3300001352 | Pelagic Marine | MYNYWIVSADETLIVISASTSECKETFTLNLPKALISSTGCIIDGLIS |
JGI20159J14440_100571501 | 3300001353 | Pelagic Marine | MYNYCIVSAEVTLTVISASTSECKEIFTLNFPRDLISSTGCIIEGL |
JGI20159J14440_101617342 | 3300001353 | Pelagic Marine | MYNY*MVSAEVTLTVISASTSECKETFTLNFPKDLIS |
GOS2218_10215212 | 3300001947 | Marine | MYNYWIVSVDETLIVISASTSECKETFTLNLPKALISSTGCIIEGLISI |
JGI24540J26637_100854841 | 3300002153 | Marine | MYNY*IVSAEVTLIVISASTSECRETLTLNFPKDLISSIG |
Ga0068495_11908752 | 3300006337 | Marine | MYNY*IVSAEDTLIIISASTSESKEILTLNFPKAFISLDY |
Ga0115011_113221521 | 3300009593 | Marine | VYNYWIVSADVTLIVISASTSECKETLTLNFPKDLISSTGCIIEGLMSTLFSS* |
Ga0115000_102377254 | 3300009705 | Marine | MVSAEVTLIVISASTSECRETLTLNFPNDLISSTGCIIEGLTSILFSS* |
Ga0163110_109740341 | 3300012928 | Surface Seawater | MLWKKLYNYWIVSAETTLIVIRASTSECKEINTSKLP |
Ga0163108_103594682 | 3300012950 | Seawater | VSADVTLIIISASTSECKEIFTLNLPKDLISSTGCIID |
Ga0181398_11302042 | 3300017725 | Seawater | MYNYCIVSADVTLIVISASTSECKETLTLNFPKDL |
Ga0181431_11579182 | 3300017735 | Seawater | MYNYCIVSAEVTFTVISASTSECRETFTLNFPNDLISSTGCIIEGF |
Ga0181402_11937961 | 3300017743 | Seawater | MYNYWIVSADETSIEISASTSECREILTLNFPKALISSRGCIIEGFMS |
Ga0181400_11462032 | 3300017752 | Seawater | MYNYWIVSAEVTLTVISASTSECKETFTLNFPKDLISST |
Ga0181422_11195531 | 3300017762 | Seawater | MYNYWIVSAEVTFTVISASTSECKETFTLNFPKDLIS |
Ga0181386_11176622 | 3300017773 | Seawater | MYNYWIVSAEVTLTVISASTSECKEIFTLNFPKDLISSTG |
Ga0181395_11404671 | 3300017779 | Seawater | MYNYCIVSAEVTLTVISASTSECKETFTLNFPKDLISSTGCIIEGLI |
Ga0181380_11582851 | 3300017782 | Seawater | MYNYCIVSAEVTLTVISASTSECKETFTLNFPKDLIS |
Ga0181380_12383471 | 3300017782 | Seawater | MYNYCIVSAEVTLTVISASTSECKEIFTLNFPKDLI |
Ga0181424_104497902 | 3300017786 | Seawater | MYNYWIVSAEVTLTVISASTSECKETFTLNFPKDLI |
Ga0181552_100937911 | 3300017824 | Salt Marsh | MYNYWIVSAEVTLIVISASTSECKETFTLNFPKDLIS |
Ga0181552_103714461 | 3300017824 | Salt Marsh | MYNYCIVSAEVTFTVISASTSECKETFTLNFPKDLISSIGCIIEGL |
Ga0181607_106019251 | 3300017950 | Salt Marsh | MYNYXMVSAEVTLTVISASTSECKETFTLNFPKDLIS |
Ga0181585_103127241 | 3300017969 | Salt Marsh | MYNYWIVSADVTLTTISASTSECKEILTLNFPKDLISSTG |
Ga0181558_106315942 | 3300018417 | Salt Marsh | MYNYCIVSAEVTFTVISASTSECKETFTLNFPKDLISS |
Ga0181567_103869391 | 3300018418 | Salt Marsh | MYNYWIVSAEVTLTVISASTSECKETLTLNFPKDLISSFGCIIDG |
Ga0181564_103547581 | 3300018876 | Salt Marsh | MYNYWIVSAEVTFTVISASTSECKETFTLNFPKDLISST |
Ga0182073_14400211 | 3300019274 | Salt Marsh | MYNYXMVSAEVTLIVISASTSECRETFTLNFPKDLISSTG |
Ga0194023_11062461 | 3300019756 | Freshwater | MYNYXMVSAEVTLTVISASTSECKETFTLNFPKDL |
Ga0181555_10856382 | 3300020051 | Salt Marsh | MYNYWIVSAEVTLIVISASTSECKETFTLNFPKDL |
Ga0181595_104225072 | 3300020053 | Salt Marsh | MYNYCIVSAEVTLTVISASTSECKETFTLNFPKDLISS |
Ga0206125_100049711 | 3300020165 | Seawater | MYNYWIVSAEETLIVISASTSECKETFTLNLPKALISSSGCIIDGL |
Ga0206129_101861252 | 3300020182 | Seawater | MYNYWIVSADKTLIVISASTSECKETFTLNLPKALI |
Ga0181605_103904422 | 3300020188 | Salt Marsh | MYNYXMVSAEVTLTVISASTSECKETFTLNFPRDL |
Ga0181570_104762932 | 3300020207 | Salt Marsh | MYNYWIVSAEVTLTVISASTSECKETFTLNFPKDL |
Ga0181570_105703062 | 3300020207 | Salt Marsh | MYNYCIVSAEVTFTVISASTSECKETFTLNFPKDLISSIGCII |
Ga0211683_100835712 | 3300020372 | Marine | MLGKKLYNYWIVSAESTLTVISASTSECKDTLTLNFPKDFISWTGCIIEGLTSI |
Ga0211516_100870772 | 3300020413 | Marine | MYNYXIVSAEDTSIEISASTSECREILTLNFPKALISS |
Ga0211516_105018642 | 3300020413 | Marine | MYNYXIVSAEETCIEISASTSECREILTLNFPKALISS |
Ga0211528_102969571 | 3300020417 | Marine | MYNYCIVSAEVTLIVISESTSECKETFTLNFPRAFISFKGCIKDGFIS |
Ga0211521_104490932 | 3300020428 | Marine | MYNYWIVSADVTLIVISASTSECKETFTLNFPKDLISSTG |
Ga0211576_105385892 | 3300020438 | Marine | MYNYCIVSAEVTLTVISASTSECKEIFTLNFPRDLISSTGCIIEGLIL |
Ga0211574_103743271 | 3300020446 | Marine | MILYNYWIFSAEFTFIIISASTSECKEIFTLNFPKDFISLTGCIIEG |
Ga0211641_102999592 | 3300020450 | Marine | MYNYXIVSAEETLMVISASTSECKEILTLNFPNAFIS |
Ga0211545_104673201 | 3300020452 | Marine | MYNYXIVSADETTIVISASTSECKEIFTLNLPRALIS |
Ga0211643_106481282 | 3300020457 | Marine | MYNYWIVSAEVTFIVISASTSECKEIFTLNFPKDLISST |
Ga0211514_103801282 | 3300020459 | Marine | MYNYCIVSAEVTLIVISASTSECKETFTLNFPKDLISS |
Ga0211514_104738122 | 3300020459 | Marine | MYNYWIVSADETLIVISASTSECKETFTLNFPKDLISSTGCIIEGLISI |
Ga0211514_105987661 | 3300020459 | Marine | MYNYXIISAEETFIEISASTSECKEILTLNFPRAL |
Ga0211676_105683851 | 3300020463 | Marine | MYNYWIVSAEETSIDISASTSECREILTLNFPKALISSTGCII |
Ga0206678_102471081 | 3300021084 | Seawater | MYNYWIVSADETLIVISASTSECRDIFTLNFPKDLISSAGCIIEGL |
Ga0206677_102281382 | 3300021085 | Seawater | MYNYWIVSADVTLIVISASTSECKETFTLNLPKDLISSTGCIIEGLISI |
Ga0213862_102157292 | 3300021347 | Seawater | MYNYWIVSAEVTLTVISASTSECKEIFTLNFPKDLISSTGCIIEG |
Ga0213859_102004901 | 3300021364 | Seawater | MYNYWIVSAEVTFTVISASTSECKETFTLNFPKDLISSTGCILH |
Ga0213860_104040232 | 3300021368 | Seawater | MYNYWIVSADVTLTTISASTSECKEILTLNFPKDLISSTGCIIEGLSY |
Ga0213869_101676511 | 3300021375 | Seawater | MYNYWIVSAEETLIVISASTSECKETFTLNLPKALISS |
Ga0213868_103792591 | 3300021389 | Seawater | MYNYXMVSAEVTLTVISASTSECKETFTLNFPKDLI |
Ga0222717_107065101 | 3300021957 | Estuarine Water | MYNYWIVSADDTLIVISASTSECKEIFTLNFPKDLISSIG |
Ga0222716_102801232 | 3300021959 | Estuarine Water | MYNYWIVSADETLTVISASTSECKETFTLNLPKALISSTGC |
Ga0222716_104606611 | 3300021959 | Estuarine Water | MYNYWIVSADVTLIVISASTSECKETFTLNFPKDLISSTGCIIEGL |
Ga0255773_103312861 | 3300022925 | Salt Marsh | MYNYWIVSAEVTLIVILASTSECKETFTLNFPKDLISST |
(restricted) Ga0233427_100255681 | 3300022933 | Seawater | MYNYWIVSADVTLIVISASTSECKETFTLNFPKDLISSTGCIIG |
(restricted) Ga0233427_100354301 | 3300022933 | Seawater | NYWMVSADFTLIVISASTSECRETLTLNFPKDLISSIGCIIDGLTSILFSS |
Ga0255754_100661873 | 3300022939 | Salt Marsh | MYNYWIVSADVTLTTISASTSECKEILTLNFPKDLISSTGCIIEG |
Ga0255754_101947572 | 3300022939 | Salt Marsh | MYNYCIVSAEVTLTVISASTSECKETFTLNFPKDLISST |
Ga0255784_102501082 | 3300023108 | Salt Marsh | MYNYWIVSAEVTLTVISASTSECKETLTLNFPKDLISS |
Ga0255761_104151321 | 3300023170 | Salt Marsh | MYNYWIVSAEVTLTVISASTSECKETFTLNFPKDLISS |
Ga0255759_106260382 | 3300023178 | Salt Marsh | MYNYWIVSADATLTTISASTSECKEIFTLNFPKDLISSTGCIIEGLI |
Ga0233399_11146871 | 3300024231 | Seawater | MYNYWIVSAEVTLTVISASTSECKETFTLNFPNDLISSTGCIIEG |
(restricted) Ga0233439_103989211 | 3300024261 | Seawater | MYNYWIVSAEVTLTVISASTSECKETFTLNFPNDLISSTGCIIEGLIS |
Ga0228661_11145961 | 3300024266 | Seawater | MYNYWIVSAEVTLTVISASTSECKETLTLNFPKDLISST |
Ga0233451_100448401 | 3300024301 | Salt Marsh | MYNYCIVSAEVTLTVISASTSECKETFTLNFPKDL |
Ga0233451_102168941 | 3300024301 | Salt Marsh | MYNYCIVSAEVTFTVISASTSECKETFTLNFPKDLISSIGC |
(restricted) Ga0233449_11659332 | 3300024302 | Seawater | MYNYWIVSADVTLIVISASTSECKEIFTLNLPKDLISSTGCIIE |
Ga0233400_10879062 | 3300024318 | Seawater | MYNYWIVSAEVTLTVISASTSECKEIFTLNFPRDLISS |
Ga0228626_10328272 | 3300024321 | Seawater | MYNYWIVSAEVTFTVISASTSECKETFTLNFPKDLISSTGCII |
(restricted) Ga0233443_11542272 | 3300024324 | Seawater | MYNYWIVSAEETLIVISASTSECRDIFTLNFPKDLIS |
Ga0228672_11858622 | 3300024335 | Seawater | MYNYWIVSAEVTFTVISASTSECKETFTLNFPKDLISSIGCIIEGLISTL |
(restricted) Ga0233447_10127301 | 3300024336 | Seawater | MYNYWIVSADVTLIVISASTSECKETFTLNLPKDLIS |
(restricted) Ga0233447_10920601 | 3300024336 | Seawater | MYNYWIVSADVTLIVISASTSECKETFTLNLPKDLISSTGCIIEGLISIL |
Ga0244775_110959412 | 3300024346 | Estuarine | MYNYWIVSAEETLIVISASTSECKETFTLNLPKALISSIGCII |
Ga0233396_11496491 | 3300024428 | Seawater | MYNYWIVSAEVTLTVISASTSECKEIFTLNFPRDL |
Ga0209046_10238881 | 3300025452 | Marine | MYNYWIVSADVTLIVISASTSECKETFTLNLPKDLI |
Ga0209142_10775932 | 3300025545 | Marine | MYNYWIVSADETLIVISASTSECRDIFTLNFPKDL |
Ga0209658_10317002 | 3300025592 | Marine | MYNYWIVSADETLIVISASTSECRDIFTLNFPKDLISSIGCI |
Ga0209263_11273972 | 3300025681 | Marine | MYNYWIVSADVTLIVISASTSECRDIFTLNFPKDL |
Ga0209095_11151621 | 3300025685 | Pelagic Marine | MYNYCIVSAEVTLTVISASTSECKEIFTLNFPRDL |
Ga0209505_10948452 | 3300025690 | Pelagic Marine | MYNYWIVSAEETLIVISASTSECKETFTLNLPKALISSTGCII |
Ga0209660_12412001 | 3300025722 | Marine | MYNYWIVSADETLIVISASTSECKEILTLNFPKDFI |
Ga0209308_101687902 | 3300025869 | Pelagic Marine | MYNYWMVSADETLIVISASTSECKETFTLNLPKALISSTGCII |
Ga0209308_102036832 | 3300025869 | Pelagic Marine | MYNYCIVSAEVTLTVISASTSECKETFTLNFPKDLISSTG |
Ga0209308_103674491 | 3300025869 | Pelagic Marine | MYNYWIVSADETLIVISASTSECNETFTLNLPKALISSTGCIIE |
Ga0209223_104275632 | 3300025876 | Pelagic Marine | MYNYWIVSAEETLIVISASTSECKETLTLNLPKALISST |
Ga0209534_104424831 | 3300025880 | Pelagic Marine | MYNYWIVSAEETLIVISASTSECKETFTLNFPKDLISSM |
Ga0209309_101682712 | 3300025881 | Pelagic Marine | MYNYWIVSAEETLIVISASTSECKETFTLNFPKDLI |
Ga0209632_101050661 | 3300025886 | Pelagic Marine | MYNYWIVSAEETLIVISASTSECKETFTLNLPKALISST |
Ga0209632_101112001 | 3300025886 | Pelagic Marine | MYNYYWIVSAEVTLTLISASTSECKETFTLNFPKDLISST |
Ga0208766_11676892 | 3300026269 | Marine | MYNYWIVSAEVTLIVISASTSECKEILTINLPKALI |
Ga0208277_12414322 | 3300026292 | Marine | MYNYXIVSADVTLIVISASTSECKETFTLNFPKDL |
Ga0228641_10236552 | 3300026491 | Seawater | MYNYWIVSAEVTLTVISASTSECKEIFTLNFPRDLISSTGCIIEGLI |
Ga0208796_11198451 | 3300027308 | Estuarine | MYNYWIVSADVTLIVISASTSECKEIFTLNLPKDLISS |
Ga0209433_103506752 | 3300027774 | Marine | MYNYXIVSAEETLTVISASTSECREILTLNFPKAF |
Ga0209091_103386181 | 3300027801 | Marine | MLGKKLYNYWIVSAVITLIVISESISECRMIFTLNFPIDLISVIGCIIEGLISSL |
Ga0228648_10503371 | 3300028126 | Seawater | MYNYWIVSAEVTFTVISASTSECKETFTLNFPKDLISSIGCIIEGLIS |
Ga0228645_10303551 | 3300028128 | Seawater | MYNYWIVSAEVTLTVISASTSECKETFTLNFPKDF |
Ga0228609_11440741 | 3300028133 | Seawater | MYNYCIVSAEVTLTVISASTSECKEIFTLNFQRDLISSTG |
Ga0228640_10927212 | 3300028273 | Seawater | MYNYWIVSAEVTLTVISASTSECKETFTLNFPKDLISSTGCIIEGLI |
Ga0228613_11248251 | 3300028279 | Seawater | MYNYCIVSAEVTLTVISASTSECKETFTLNFPKDLISSTGLIIDG |
Ga0233394_10334431 | 3300028391 | Seawater | MYNYWIVSAEVTFTVISASTSECKETFTLNFPKDLISSIGCIIEGLI |
Ga0308001_101290341 | 3300031644 | Marine | MLGKKLYNYWIVSEVITLIVISESTSECKVTFTLNLPSDLISVIGCIIEGFI |
Ga0310343_108182552 | 3300031785 | Seawater | MYNYCIVSAEDTFIVTSASTSECKEILTLNFPKAFISSTGCIIEGFMSILLTS |
Ga0315320_102518792 | 3300031851 | Seawater | MYNYCIVSAEVTLTVISASTSECKETFTLNLPKDLI |
Ga0315320_105699431 | 3300031851 | Seawater | MYNYWIVSAEVTLTVISASTSECNETFTLNFPKDL |
Ga0315320_110055972 | 3300031851 | Seawater | MYNYWIVSAEVTLIVISASTSECKETFTLNFPKDLISSTG |
Ga0315316_116464991 | 3300032011 | Seawater | MYNYWIVSAEVTLIVISASTSECKEILTINLPKALIS |
Ga0315330_107763712 | 3300032047 | Seawater | MYNYWIVSAEVTLTVISASTSECKEIFTLNFPKDLISSTGCIIE |
Ga0315315_107454812 | 3300032073 | Seawater | MYNYWIVSAEETLIVISASTSECKDILTLNFPKDLISSTGCIIEGLISILFSS |
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