Metagenome / Metatranscriptome Family F068866

Basic Information
Family ID	F068866
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	62 residues
Representative Sequence	MKYKGYIINLRPLRGVEGLWQLEIDRGNFVTTRSVGVEMTLKAIEQYAFDEIDKLIKKEKNE
Number of Associated Samples	96
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	32.26 %
% of genes near scaffold ends (potentially truncated)	27.42 %
% of genes from short scaffolds (< 2000 bps)	93.55 %
Associated GOLD sequencing projects	84
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.66

Hidden Markov Model
Column number x ScaleMaximum Observed Maximum Theoretical Color SchemeDefault Consensus Colors CoordinatesModel Alignment

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Most Common Taxonomy
Group	Unclassified (53.226 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (26.613 % of family members)
Environment Ontology (ENVO)	Unclassified (62.903 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (82.258 % of family members)

Multiple Sequence Alignments

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Full Alignment
Alignment of all the sequences in the family.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72. 1DelMOSpr2010_102612221 2DelMOWin2010_100996643 3DelMOWin2010_101908051 4JGI20151J14362_100652143 5JGI20151J14362_101487691 6JGI24003J15210_100773962 7JGI24003J15210_100805152 8Ga0074242_110330065 9Ga0074649_10350412 10Ga0075474_100882432 11Ga0075462_100946493 12Ga0075462_102070792 13Ga0075514_17287552 14Ga0098073_10376751 15Ga0098038_12349971 16Ga0098042_10704141 17Ga0098055_11912211 18Ga0070749_102879432 19Ga0070749_103213811 20Ga0070749_103761882 21Ga0070749_106885531 22Ga0070749_107024552 23Ga0070754_101999783 24Ga0075481_103599981 25Ga0070750_102550592 26Ga0070750_103041152 27Ga0070746_103654142 28Ga0070746_104416941 29Ga0070746_105240351 30Ga0098060_11818562 31Ga0098041_12891363 32Ga0075460_100969801 33Ga0075463_102651311 34Ga0075463_102678261 35Ga0070752_13226342 36Ga0070753_12156711 37Ga0099847_10533073 38Ga0102945_11033901 39Ga0070751_12207272 40Ga0102960_10165246 41Ga0102960_11333511 42Ga0102960_11853242 43Ga0102960_11991412 44Ga0102963_10325803 45Ga0102963_13011041 46Ga0102957_10679331 47Ga0102957_13838511 48Ga0115566_106601021 49Ga0115550_12764293 50Ga0115548_12531492 51Ga0115545_10819503 52Ga0115553_14137971 53Ga0098059_13363131 54Ga0129345_10944752 55Ga0136655_11081652 56Ga0129352_103270021 57Ga0180120_104250162 58Ga0181377_10875443 59Ga0181404_10599721 60Ga0181390_11627792 61Ga0181388_10340403 62Ga0181381_10744302 63Ga0181418_11468941 64Ga0181392_10986821 65Ga0181382_10470733 66Ga0181406_11931452 67Ga0187221_10260714 68Ga0181394_11309252 69Ga0181552_100792742 70Ga0181577_103434561 71Ga0181577_106108572 72Ga0180437_102111502 73Ga0180437_103224803 74Ga0181590_103277093 75Ga0180438_109330262 76Ga0180434_103748453 77Ga0180434_104194711 78Ga0181559_101268733 79Ga0181563_102480152 80Ga0181563_104681002 81Ga0181592_101489683 82Ga0181591_101897043 83Ga0181591_111017262 84Ga0194029_10449962 85Ga0206125_100738781 86Ga0206125_101095292 87Ga0211504_11335092 88Ga0211677_103799601 89Ga0211576_101470701 90Ga0211558_101351532 91Ga0211577_101574533 92Ga0213867_11846712 93Ga0213860_103241502 94Ga0213866_102360731 95Ga0222717_102041911 96Ga0222717_106362011 97Ga0222718_100505075 98Ga0222718_102979881 99Ga0222718_103569203 100Ga0222718_105126461 101Ga0222715_103321952 102Ga0222719_104273353 103Ga0212021_11136702 104Ga0255773_102613831 105Ga0255768_105941881 106Ga0208157_10792441 107Ga0208159_10474143 108Ga0209535_11018312 109Ga0208919_11150202 110Ga0209195_11110291 111Ga0208004_10840961 112Ga0208795_11441541 113Ga0208898_11607892 114Ga0208899_11440152 115Ga0208899_12512362 116Ga0208767_12604941 117Ga0209193_10427174 118Ga0208542_11886942 119Ga0208644_12234111 120Ga0209962_10724902 121Ga0209932_10294602 122Ga0209929_10175272 123Ga0209427_105199641 124Ga0209536_1000947524
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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72. 1DelMOSpr2010_102612221 2JGI20151J14362_100652143 3Ga0098073_10376751 4Ga0070749_103213811 5Ga0070749_107024552 6Ga0211558_101351532 7Ga0222718_103569203 8Ga0209962_10724902
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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.
ID â†‘ ID â†“ Label â†‘ Label â†“ Seq â†‘ Seq â†“ Identity â†‘ Identity â†“ Gaps â†‘ Gaps â†“ Consensus to top Sorting Hide columns by threshold Hide columns by selection Hide columns by gaps Hide seqs by identity Hide seqs by selection Hide seqs by gaps Reset Filter Find Motif (supports RegEx) Invert columns Invert rows Reset Selection Hide residues indices Hide ID/Label Show meta info (Gaps/Ident) Show overview panel Show sequence logo Show gap weights Show conservation weights Show scale slider Hide Label Hide ID Hide gaps % Hide identity score Reset Vis.elements Taylor Buried Cinema Clustal Clustal2 Helix Hydrophobicity Lesk MAE Nucleotide Purine PID Strand Turn Zappo No color Color scheme Add consensus seq Jump to a column Extras Share view (URL)â†ª View in Jalview Export alignment (FASTA) Export alignment (URL) Export selected sequences (FASTA) Export features (GFF) Export MSA image (PNG) Export About the project Report issues User manual Help IDLabel .2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62 1Ga0102963_13011041 2Ga0098038_12349971 3Ga0070746_103654142 4Ga0098060_11818562 5Ga0102957_13838511 6Ga0181377_10875443 7Ga0181390_11627792 8Ga0181418_11468941 9Ga0181392_10986821 10Ga0181552_100792742 11Ga0181577_103434561 12Ga0181577_106108572 13Ga0180437_103224803 14Ga0180434_104194711 15Ga0211558_101351532 16Ga0213860_103241502 17Ga0255773_102613831 18Ga0209427_105199641
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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.33% β-sheet: 27.78% Coil/Unstructured: 48.89%
Feature Viewer
Position : 0 Zoom : x 1 + Add Multiple Variants Enter the variants Position Original Variant Get Predictions Get Predictions Enter the variants Position Original Variant A / Ala R / Arg N / Asn D / Asp C / Cys E / Glu Q / Gln G / Gly H / His I / Ile L / Leu K / Lys M / Met F / Phe P / Pro S / Ser T / Thr W / Trp Y / Tyr V / Val
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Structure Viewer
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.66
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.66
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Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF03237	Terminase_6N	2.42

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	46.77 %
Unclassified	root	N/A	53.23 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	1.61 %
Unclassified	root	N/A	53.23 %
Viruses	superkingdom	All Organisms → Viruses	45.16 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	1.61 %
Unclassified	root	N/A	53.23 %
Viruses	superkingdom	All Organisms → Viruses	45.16 %

Scaffold	Taxonomy	Length	IMG/M Link
3300000116\|DelMOSpr2010_c10261222	Not Available	523	Open in IMG/M
3300000117\|DelMOWin2010_c10099664	All Organisms → Viruses	1069	Open in IMG/M
3300000117\|DelMOWin2010_c10190805	All Organisms → Viruses	638	Open in IMG/M
3300001346\|JGI20151J14362_10065214	Not Available	1459	Open in IMG/M
3300001346\|JGI20151J14362_10148769	Not Available	705	Open in IMG/M
3300001460\|JGI24003J15210_10077396	Not Available	1017	Open in IMG/M
3300001460\|JGI24003J15210_10080515	Not Available	987	Open in IMG/M
3300005346\|Ga0074242_11033006	All Organisms → cellular organisms → Bacteria	4639	Open in IMG/M
3300005613\|Ga0074649_1035041	All Organisms → Viruses	2429	Open in IMG/M
3300006025\|Ga0075474_10088243	Not Available	1010	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	0.81%
Marine	Environmental → Aquatic → Marine	83.87%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	15.32%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	31.45%
Hypersaline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline	4.03%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	9.68%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	4.03%
Oceanic	Environmental → Aquatic → Marine → Oceanic	12.90%
Pelagic	Environmental → Aquatic → Marine → Pelagic	7.26%
River	Environmental → Aquatic → Freshwater → River	0.81%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	11.29%
Strait	Environmental → Aquatic → Marine → Strait	8.06%
Unclassified	Environmental → Aquatic → Marine → Unclassified	10.48%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	9.68%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment	4.03%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	1.61%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment	1.61%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	31.45%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	11.29%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	10.48%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	9.68%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	8.06%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	7.26%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	4.03%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	26.61%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	6.45%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.81%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	2.42%
Hypersaline Lake Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Hypersaline → Sediment → Hypersaline Lake Sediment	4.03%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	11.29%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	4.03%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	2.42%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	1.61%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	5.65%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	1.61%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	8.87%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment	1.61%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	9.68%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	8.06%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	2.42%
Seawater	Environmental → Aquatic → Marine → Pelagic → Unclassified → Seawater	1.61%
Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Water	0.81%

Visualization
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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000116	Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010	Environmental	Open in IMG/M
3300000117	Marine microbial communities from Delaware Coast, sample from Delaware MO Winter December 2010	Environmental	Open in IMG/M
3300001346	Pelagic Microbial community sample from North Sea - COGITO 998_met_01	Environmental	Open in IMG/M
3300001460	Marine viral communities from the Pacific Ocean - LP-28	Environmental	Open in IMG/M
3300005346	Saline sediment microbial community from Etoliko Lagoon, Greece	Environmental	Open in IMG/M
3300005613	Saline sediment microbial communities from Etoliko Lagoon, Greece - sediment	Environmental	Open in IMG/M
3300006025	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA	Environmental	Open in IMG/M
3300006027	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA	Environmental	Open in IMG/M
3300006403	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006734	Marine viral communities from the Gulf of Mexico - 31_GoM_OMZ_CsCl metaG	Environmental	Open in IMG/M

Showing 1 to 10 of 96 entries

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Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSpr2010_102612221	3300000116	Marine	MKYKGYIINLRPLRGVEGLWQLEIDRGNFVTTRSVGVEMTLKAIEQYAFDEIDKLIEKEKNE*
DelMOWin2010_100996643	3300000117	Marine	MAKLSYKSYIIILRPLRGVEGLWQLEIERGNFVTTRSVGSEMTLKAIEQYAFDEIDKLIEKEKNT*
DelMOWin2010_101908051	3300000117	Marine	MKYKGYIINLRPLRGVEGLWQLEIEKGNFISTRSVGVEMTLKAIEQYAFDEIDKLIKKEINE*
JGI20151J14362_100652143	3300001346	Pelagic Marine	MARLSYKSYIINLKPLRDVKDLWQLEIERGNFVTTRSVGSEMTLKAIEDYAFNEIDKLIKEEIRS*
JGI20151J14362_101487691	3300001346	Pelagic Marine	MARLSYKSYIINLKPLRDVKDLWQLEIERGNFVTTRSVGSEMTLKAIEQYAFDEIDK
JGI24003J15210_100773962	3300001460	Marine	MARLSYKSYIINLKPLRDVKDLWQLEIERGNFVTTRSVGTEMTLKAIEDYAFNEIDKLIEQEKKS*
JGI24003J15210_100805152	3300001460	Marine	MARLSYKSYIINAKPLRDVKDLWQLEIERGNFVTTRSVGAEMTLKAVEDYAFNEIDKLIEQEKNT*
Ga0074242_110330065	3300005346	Saline Water And Sediment	MKYKGYTINLRPLRGVEGLWQLEIERGDFISTRSVGVEMTLKAIEQYAFDEIDKLIKKK*
Ga0074649_10350412	3300005613	Saline Water And Sediment	MKYKGYTINLRPLRGVEGLWQLEIERGDFISTRSVGVEMTLKAIEQYAFDEIDKLIKKEINE*
Ga0075474_100882432	3300006025	Aqueous	MAKLTFKGYSIILRPLRGVEGLWQLEIDRGNFVTTRSVGVEMTLKEIEQYAFDQIDLLIKKEINE*
Ga0075462_100946493	3300006027	Aqueous	MKYKGYIINLRPLRGVEGLWQLEIEKGNFISTRSVGVEMTLKAIEQYAFDEIDKLIKKE
Ga0075462_102070792	3300006027	Aqueous	MAKLTFKGYSIILRPLRGVEGLWQLEIDRGNFVTTRSVGVEMTLKAIEQYAFDEIDKLIEKEKNE*
Ga0075514_17287552	3300006403	Aqueous	MAKLSYKSYIIILRPLRGVEGLWQLEIERGNFVTTRSVGSEMTLKAIEQYAFDEIDKLIEKEKIHEQC*
Ga0098073_10376751	3300006734	Marine	SLRPLKDVEGLWQLEIDRGNFVTTRSVGSEMTLKDVETYAFDQIDKLVKEEEKR*
Ga0098038_12349971	3300006735	Marine	MARLSYKGFRINLKPLRDVKDLWQLEIDRGDYVTTRSVGTEMTLKAIEDYAFNEIDKIIEEEKKS*
Ga0098042_10704141	3300006749	Marine	MARLSYKGYRINLKPLRDVKDLWQLEIDRGNYVTTRSVGTEMTLKAIEDYAFNEIDKIIEEEIKS*
Ga0098055_11912211	3300006793	Marine	MAKLSYKSYIIILRPLRGVEGLWQLEIERGNFVTTRSVGIEMTLKAIEQYAFDEIDKLIEKEKNT*
Ga0070749_102879432	3300006802	Aqueous	LRPLRGVEGLWQLEIDRGNFVTTRSVGVEMTLKEIEQYAFDQIDLLIKKEINE*
Ga0070749_103213811	3300006802	Aqueous	PLRGVEGLWQLEIEKGDFISTRSVGVEMTLKAIEQYAFDQIDLLIKKEKNE*
Ga0070749_103761882	3300006802	Aqueous	MAKLSYKSYIITLRPLRGVEGLWQLEIERGNFVTTRSVGSEMTLKAIEQYAFDEIDKLIEKEKNT*
Ga0070749_106885531	3300006802	Aqueous	MKYKGYIINLRPLRDVEGLWQLEIDRGNFVTTRSVGVEMTLKAIEQYAFDEIDKLIEKEKKS*
Ga0070749_107024552	3300006802	Aqueous	MAKLTFKGYSIILRPLRGVEGLWQLEIDRGNFVTTRSVGVEMTLKEIEQYAFD
Ga0070754_101999783	3300006810	Aqueous	MKYKGYTINLRPLRGVEGLWQLEIEKGDFISTRSVGVEMTLKAIEQYAFDEIDKLIKKEINE*
Ga0075481_103599981	3300006868	Aqueous	MAKLTFKGYSIILRPLRGVEGLWQLEIDRGNFVTTRSVGVEMTLKAIEQYAFDEIDKLIKKEINE*
Ga0070750_102550592	3300006916	Aqueous	MAKLSYKSYIITLRPLRGVEGLWQLEIERGNFVTTRSVGVEMTLKAIEQYAFDEIDKLIEKEKN
Ga0070750_103041152	3300006916	Aqueous	MKYKGYTINLRPLRGVEGLWQLEIERGNFISTRSVGVEMTLKAIEQYAFDEIDKLIKKEINE*
Ga0070746_103654142	3300006919	Aqueous	MKYKGYTINLRPLRGVEGLWQLEIDRGNFVTTRSVGVEMTLKEIEQYAFDQIDLLIKKEITT*
Ga0070746_104416941	3300006919	Aqueous	MAKLSYKSYIITLRPLRGVEGLWQLEIERGNFVTTRSVGVEMTLKEIEQYAFDEIDKLIEKEKNT*
Ga0070746_105240351	3300006919	Aqueous	MPKLSYKSYIINLRPLRGVEGLWQLEIERGNFVTTRSVGSEMTLKAIEQYAFDEIDKLIEKEKNT*
Ga0098060_11818562	3300006921	Marine	MPKLSYKSYIINLRPLRGVEDLWQLEIERGNFVTTRSVGAEMTLKAVEDYAFNEIDKLIEQEKNT*AVLIS
Ga0098041_12891363	3300006928	Marine	MARLSYKGYRINLKPLRDVKDLWQLEIDRGNYVTTRSVGTEMTLKAIEDYAFNEIDKIIEEEIKSHGI
Ga0075460_100969801	3300007234	Aqueous	MAKLTFKGYSIILRPLRGVEGLWQLEIDRGNFVTTRSVGVEMTLKEIEQYAFDEIDKLIKKEINE*
Ga0075463_102651311	3300007236	Aqueous	MKYKGYTINLRPLRGVEGLWQLEIERGDFISTRSVGVEMTLKAIEQYAFDEIDKLI
Ga0075463_102678261	3300007236	Aqueous	PLRGVEGLWQLEIDRGNFVTTRSVGVEMTLKAIEQYAFDEIDKLIKKEINE*
Ga0070752_13226342	3300007345	Aqueous	YSIILRPLRGVEGLWQLEIDRGNFVTTRSVGVEMTLKEIEQYAFDQIDLLIKKEINE*
Ga0070753_12156711	3300007346	Aqueous	MKYKGYRINLRPIRGVEGLWQLEIERGNFVTTRSVGSEMTLKAIEQYAFDEIDKLIEKEKNT*
Ga0099847_10533073	3300007540	Aqueous	MSLKYKGYIISLRPLKDVEGLWQLEIDRGNFVTTRSVGSEMTLKDVETYAFDQIDKLVKEEEKR*
Ga0102945_11033901	3300007609	Pond Water	MKYKGYIINLKPLRDVEGLWQLEIDRGNFVTTRSVGVEMTLQAIEQYAFD
Ga0070751_12207272	3300007640	Aqueous	MAKLTFKGYSIILRPLRGVEGLWQLEIDRGNFVTTRSVGVEMTLKEIEQYAFDQIDLLIKKEKNE*
Ga0102960_10165246	3300009000	Pond Water	MAKLSYKSYIIILRPLRGVEGLWQLEIERGNFVTTRSVGSEMTLKAIEQYAFDE
Ga0102960_11333511	3300009000	Pond Water	MKYKGYIIQLRPLRGVEGLWQLEIDRGNFVTVRSVGVEMTLKEIEQYAFDEIDKLIKKEIKT*
Ga0102960_11853242	3300009000	Pond Water	SYIINLKPLRDVKDLWQLEIERGNFVTTRSVGSEMTLKAIEQYAFDEIDKLIEKEKNT*
Ga0102960_11991412	3300009000	Pond Water	MARLSYKSYIIILRPLRGVEGLWQLEIERGNFVTTRSVGSEMTLKAIEQYAFDEIDKLIEKEKNT*
Ga0102963_10325803	3300009001	Pond Water	MAKLTFKGYSIILRPLRGVEGLWQLEIDRGNFVTTRSVGVEMTLKEIEQYAFDQIDLLIKKEQNE*
Ga0102963_13011041	3300009001	Pond Water	MKYKGYIINLRPLRGVEGLWQLEIDRGNFVTTRSVGVEMTLKAIEQYAFDEIDKLIKKEKNE*
Ga0102957_10679331	3300009027	Pond Water	MKYKGYTINLRPLRGVEGLWQLEIDRGNFVTTRSVGVEMTLKTIEQYAFDEIDKLIKKEINE*
Ga0102957_13838511	3300009027	Pond Water	MSLKYKGYIISLRPLKDVEGVWQLEIDRGNFVTTRSVGVEMTLKAIEDYAFNQIDKLVKEEERR*
Ga0115566_106601021	3300009071	Pelagic Marine	MARLSYKSYIINLKPLRDVKDLWQLEIERGNFVTTRSVGSEMTLKAVEDYAFNEIDKLIEEEKKS*
Ga0115550_12764293	3300009076	Pelagic Marine	MARLSYKSYIINLKPLRDVKDLWQLEIERGNFVTTRSVGSEMTLKAVEDYAFNEID
Ga0115548_12531492	3300009423	Pelagic Marine	MARLSYKSYIINLKPLRDVKDLWQLEIERGNFVTTRSVGNEMTLKAVEDYAFNEIDKLIEEEKKS*
Ga0115545_10819503	3300009433	Pelagic Marine	MARLSYKSYIINLKPLRDVKDLWQLEIERGNFVTTRSVGSEMTLKAVEDYAFNEIDKLIEKEIQS*
Ga0115553_14137971	3300009445	Pelagic Marine	MARLSYKSYIINLKPLRDVKDLWQLEIERGNFVTTRSVGTEMTLKAIEDYAFKEIDKLIEEEI
Ga0098059_13363131	3300010153	Marine	MARLSYKSYIINLKPLRDVKALWQLEIERGNFVTTRAVGTEMTLKAIEDYAFNEIDKLIEEEKKS*
Ga0129345_10944752	3300010297	Freshwater To Marine Saline Gradient	MKYKGYTINLRPLRGVEGLWQLEIEKGNFISTRSVGVEMTLKAIEQYAFDEIDKLIKKEINE*
Ga0136655_11081652	3300010316	Freshwater To Marine Saline Gradient	MKYKGYIINLRPLRGVEGLWQLEIERGDFISTRSVGVEMTLKAIEQYAFDEIDKLIKKEINE*
Ga0129352_103270021	3300012528	Aqueous	MKYKGYTINLRPLRGVEGLWQLEIEKGNFISTRSVGVEMTLKAIEQYAFDQID
Ga0180120_104250162	3300017697	Freshwater To Marine Saline Gradient	MKYKGYIINLRPLRGVEGLWQLEIERGDFISTRSVGVEMTLKAIEQYAFDEIDKLIKKEINE
Ga0181377_10875443	3300017706	Marine	MARLSYKSYIINLKPLRDVKALWQLEIERGNFVTTRSVGTEMTLKAIENYAFNEIDKLIENEKKT
Ga0181404_10599721	3300017717	Seawater	MPRLSYKSYIINLKPLRDVKDLWQLEIERGNFVTTRSVGTEMTLKAIEDYAFNEIDKLIKEEIRS
Ga0181390_11627792	3300017719	Seawater	MARLSYKSYIINLKPLREGKSLWQLEIERGNFVTTRLVGSEMTLKAIEQYAFDEIDKLIEEEKKS
Ga0181388_10340403	3300017724	Seawater	MARLSYKSYIINLKPLREGKSLWQLEIERGNFVTTRSVGAEMTLKAVENYAFNEIDKLIEQEKNT
Ga0181381_10744302	3300017726	Seawater	MARLSYKSYIIILRPLRGVEGLWQLEIERGNFVTTRSVGSEMTLKAIEQYAFDEIDKLIEKEKNT
Ga0181418_11468941	3300017740	Seawater	MARLSYRGFRINLKPLRDVKDLWQLEIDRGNFVTTRSVGTEMTLKAIEDYAFNEVDKIIKEEIKT
Ga0181392_10986821	3300017749	Seawater	MARLSYKSYIINLKPLRDVKDLWQLEIERGNFVTTRSVGTEMTLKAIEDYAFNEIDKLIKEETRS
Ga0181382_10470733	3300017756	Seawater	MARLSYKSYIINAKPLRDVKDLWQLEIERGNFVTTRSVGAEMTLKAVENYAFNEI
Ga0181406_11931452	3300017767	Seawater	ARLSYKSYIINLKPLRDVKDLWQLEIERGNFVTTRSVGTEMTLKAIEDYAFNEIDKLIKEEIRS
Ga0187221_10260714	3300017769	Seawater	MARLSYKSYIINAKPLRDVKDLWQLEIERGNFVTTRSVGAEMTLKAVENYAFNEIDKLIEQEK
Ga0181394_11309252	3300017776	Seawater	MARLSYKSYIINLKPLRDVKDLWQLEIERGNFVTTRSVGTEMTLKAIEDYAFNEIDKLIKEEVRS
Ga0181552_100792742	3300017824	Salt Marsh	MAKLSYKSYIIILRPLRGVEGLWQLEIERGNFVTTRSVGSEMTLKAIEQYAFDEIDKLIEKEKNT
Ga0181577_103434561	3300017951	Salt Marsh	MARLTYKGYSINLRPLRGVEGLWQLEIERGNFVTTRRVGVEMSLKEIEQYTFDEIDKLIKKEINT
Ga0181577_106108572	3300017951	Salt Marsh	MARLTYKSYIINLKPRRDVKGLWQLEIERGNFVTTRRVGVEMTLKEIEDFAFDEIDKLIKKEINT
Ga0180437_102111502	3300017963	Hypersaline Lake Sediment	MKYKGYTINLRPLRGVEGLWQLEIERGNFVTTRSVGVEMTLKEIEQYAFDQIDLLIKKEINE
Ga0180437_103224803	3300017963	Hypersaline Lake Sediment	MKYKGYTINLRPLRGVEGLWQLEIERGDFISTRSVGVEMTLKAIEQYAFDEIDKLIKKEIKT
Ga0181590_103277093	3300017967	Salt Marsh	MKYKGYTINLRPLRGVEGLWQLEIEKGNFISTRSVGVEMTLKAIEQYAFDEIDKLIKKEINE
Ga0180438_109330262	3300017971	Hypersaline Lake Sediment	MKYKGYIINLRPLRGVEGLWQLEIDRGNFVTVRSVGVEMTLKEIENYAFDEIDKLIKKEKNE
Ga0180434_103748453	3300017991	Hypersaline Lake Sediment	MARLTYRSYIINLKPLRDVMGLWQLEIERGNFVTTRRVGVEMTLKEIEDYAFDEVDKLIKKEIIT
Ga0180434_104194711	3300017991	Hypersaline Lake Sediment	MAKLTFKGYSVMLRPLRGVEGLWQLEIDRGNFVTTRSVGVEMTLKEIENYAFDEIDKLIKKEQNE
Ga0181559_101268733	3300018415	Salt Marsh	MAKQSYKSYIIILRPLRGVEGLWQLEIERGNFVTTRSVGSEMTLKAIEQYAFDEIDKLIEKEKNT
Ga0181563_102480152	3300018420	Salt Marsh	MAKLSYKSYIITLRPLRGVEGLWQLEIERGNFVTTRSVGVEMTLKAIEQYAFDEIDKLIEQEKNT
Ga0181563_104681002	3300018420	Salt Marsh	MAKLTFKGYSIILRPLRGVEGLWQLEIDRGNFVTTRSVGVEMTLKEIEQYAFDQIDLLIKKEQNE
Ga0181592_101489683	3300018421	Salt Marsh	MKYKGYTINLRPLRGVEGLWQLEIEKGNFISTRSVGVEMTLKAIEQYAFDEIDKLIKKEIKQQ
Ga0181591_101897043	3300018424	Salt Marsh	MKYKGYTINLRPLRGVEGLWQLEIDRGNFVTTRSVGVEMTLKEIEQYAFDEID
Ga0181591_111017262	3300018424	Salt Marsh	MARLTYKSYIINLKPLRDVKGLWQLEIERGNFVTTRRVGVEMTLKEIEDFAFD
Ga0194029_10449962	3300019751	Freshwater	MKYKGYTINLRPLRGVEGLWQLEIERGDFISTRSVGVEMTLKAIEQYAFDEIDKLIKKEINE
Ga0206125_100738781	3300020165	Seawater	MARLSYKSYIINLKPLRDVKDLWQLEIERGNFVTTRSVGSEMTLKAIEDYAFNEIDKLIKEEIRS
Ga0206125_101095292	3300020165	Seawater	MARLSYKSYIINLKPLRDVKDLWQLEIERGNFVTTRSVGSEMTLKAVEDYAFNEIDKLIEKEIQS
Ga0211504_11335092	3300020347	Marine	MARLSYKSYIINLKPLRDVKDLWQLEIERGNFVTTRSVGSEMTLKAVEDYAFNEIDKLIEKEKNS
Ga0211677_103799601	3300020385	Marine	MARLSYKSYIINLKPLRDVKALWQLEIERGNFVTTRSVGTEMTLKAIEDYAFNEIDKLIEQEKKS
Ga0211576_101470701	3300020438	Marine	MARLSYKSYIINLKPLRDVKDLWQLEIERGNFVTTRSVGTEMTLKAIEDYAFNEIDKLIKEEIRS
Ga0211558_101351532	3300020439	Marine	MKYRGYHINLKPINVDGLWQLELEKGSFITTRSVGVEMTLTEIEKYAYDQIDKLVEDEKKKT
Ga0211577_101574533	3300020469	Marine	MARLSYKSYIINAKPLRDVKDLWQLEIERGNFVTTRSVGAEMTLKAVENYAFNEIDKLIEQEKNT
Ga0213867_11846712	3300021335	Seawater	MKYKGYTINLRPLRGVEGLWQLEIDRGNFVTTRSVGVEMTLKEIENYAFDEIDKLIKKEKNE
Ga0213860_103241502	3300021368	Seawater	MAKLTFKGYSIILRPLRGVEGLWQLEIERGDFISTRSVGVEMTLKAIEQYAFDEIDKLIKKEINE
Ga0213866_102360731	3300021425	Seawater	MKYKGYTINLRPLRGVEGLWQLEIDRGNFVTTRSVGVEMTLKEIEQYAFDQIDLLIKKEINE
Ga0222717_102041911	3300021957	Estuarine Water	MAKLSYKSYIINLRPLRGVEGLWQLEIERSNFVTTRSVGVEMTLKEIETYAFDEIDKLIEKEKNT
Ga0222717_106362011	3300021957	Estuarine Water	GYIINLRPLRGVEGLWQLEIERGDFISTRSVGVEMTLKAIEQYAFDEIDKLIKKEINE
Ga0222718_100505075	3300021958	Estuarine Water	MARLSYKSYIINLKPLRDVKDLWQLEIERGNFVTTRSVGSEMTLKAIEQYAFDEIDKLIEKEKNT
Ga0222718_102979881	3300021958	Estuarine Water	MAKLSYKSYIITLRPLRGVEGLWQLEIERGNFVTTRSVGSEMTLKAIEQYAFDEIDKLIEKEKNT
Ga0222718_103569203	3300021958	Estuarine Water	MSLKYKGYIISLRPLKDVEGVWQLEIDRGNFVTTRSVGVEMTLKAIEDYAFNQIDKLVKE
Ga0222718_105126461	3300021958	Estuarine Water	GYIISLRPLKDVEGVWQLEIDRGNFVTTRSVGVEMTLKAIEEYAFNQIDKLVREEERR
Ga0222715_103321952	3300021960	Estuarine Water	MSLKYKGYIISLRPLKDVEGVWQLEIDRGNFVTTRSVGVEMTLKAIEEYAFNQIDKLVKEEERR
Ga0222719_104273353	3300021964	Estuarine Water	MSLKYKGYIISLRPLKDVEGVWQLEIDRGNFVTTRSVGVEMTLKAIEEYAFNQIDKLVREEERR
Ga0212021_11136702	3300022068	Aqueous	MAKLTFKGYSIILRPLRGVEGLWQLEIDRGNFVTTRSVGVEMTLKEIEQYAFDQIDLLIKKEINE
Ga0255773_102613831	3300022925	Salt Marsh	MASLTFKGYSINLRPLRGVEGLWQLEIERGNFVTTRSVGVEMTLNDIEIYAFDEIDKLIEEEKK
Ga0255768_105941881	3300023180	Salt Marsh	MKYKGYIINLRPLRGVEGLWQLEIDRGNFVTTRSVGVEMTLKEIEQYAFDEIDKLIKKEITT
Ga0208157_10792441	3300025086	Marine	MARLSYKGFRINLKPLRDVKDLWQLEIDRGDYVTTRSVGTEMTLKAIEDYAFNEIDKIIEEEKKS
Ga0208159_10474143	3300025101	Marine	MARLSYKGYRINLKPLRDVKDLWQLEIDRGNYVTTRSVGTEMTLKAIEDYAFNEIDKIIEEEIKS
Ga0209535_11018312	3300025120	Marine	MARLSYKSYIINAKPLRDVKDLWQLEIERGNFVTTRSVGAEMTLKAVEDYAFNEIDKLIEQEKNT
Ga0208919_11150202	3300025128	Marine	MPKLSYKSYIINLRPLRGVEDLWQLEIERGNFVTTRSVGAEMTLKAVEDYAFNEIDKLIEQEKNT
Ga0209195_11110291	3300025590	Pelagic Marine	MARLSYKSYIINLKPLRDVKDLWQLEIERGNFVTTRSVGSEMTLKAVEDYAFNEIDKLIEEEKKS
Ga0208004_10840961	3300025630	Aqueous	MAKLTFKGYSIILRPLRGVEGLWQLEIDRGNFVTTRSVGVEMTLKAIEQYAFDEIDKLIKKEINE
Ga0208795_11441541	3300025655	Aqueous	MKYKGYTINLRPLRGVEGLWQLEIEKGNFISTRSVGVEMTLKAIEQYAFDQIDLLIKKEINE
Ga0208898_11607892	3300025671	Aqueous	MKYKGYTINLRPLRGVEGLWQLEIEKGNFISTRSVGVEMTLKAIEQYAFDQIDLLIKKEI
Ga0208899_11440152	3300025759	Aqueous	MAKLTFKGYSIILRPLRGVEGLWQLEIDRGNFVTTRSVGVEMTLKEIEQYAFDEIDKLIKKEINE
Ga0208899_12512362	3300025759	Aqueous	MKYKGYTINLRPLRGVEGLWQLEIERGNFISTRSVGVEMTLKAIEQYAFDEIDKLIKKEINE
Ga0208767_12604941	3300025769	Aqueous	MPKLSYKSYIINLRPLRGVEGLWQLEIERGNFVTTRSVGSEMTLKAIEQYAFDEIDKLIEKEKNT
Ga0209193_10427174	3300025816	Pelagic Marine	MARLSYKSYIINLKPLRDVKDLWQLEIERGNFVTTRSVGTEMTLKAIEDYAFKEIDKLIEEEIKS
Ga0208542_11886942	3300025818	Aqueous	MKYKGYTINLRPLRGVEGLWQLEIDRGNFVTTRSVGVEMTLKEIEQYAFDQIDLLIKKEITT
Ga0208644_12234111	3300025889	Aqueous	MAKLSYKSYIIILRPLRGVEGLWQLEIERGNFVTTRSVGVEMTLKEIEQYAFDEIDKLIE
Ga0209962_10724902	3300026125	Water	MAKLTFKGYSIILRPLRGVEGLWQLEIERGDFISTRSVGVEMTLKEIEQYAFDEIDKLIKKEIKTXAVLIFIS
Ga0209932_10294602	3300026183	Pond Water	MKYKGYIINLRPLRGVEGLWQLEIDRGNFVTVRSVGVEMTLKEIEQYAFDQIDLLIKKEQNE
Ga0209929_10175272	3300026187	Pond Water	MKYKGYIINLRPLRGVEGLWQLEIDRGNFVTVRSVGVEMTLKEIEQYAFDEIDKLIKKEIKT
Ga0209427_105199641	3300027901	Marine Sediment	MSLRYKGYIVSLRPLKDVEGLWQLEIDRGNFVTTRSVGSEMTLKDVETYAFDQIDKLVKEEEKR
Ga0209536_1000947524	3300027917	Marine Sediment	MSLKYKGYIISLRPLKDVEGLWQLEIDRGNFVTTRSVGSEMTLKDVETYAFDQIDKLVKEEEKR

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F068866

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences