Metagenome / Metatranscriptome Family F068802

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F068802
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	89 residues
Representative Sequence	MKRMMLAIATAAAVLTTAPLLAGTARADSTRLAQADVDVRIGPRGPGVVIDEPRRRRDVEIETEGRTLRDCRSVTVREWRNGVRVTRTERRCD
Number of Associated Samples	98
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	74.19 %
% of genes near scaffold ends (potentially truncated)	36.29 %
% of genes from short scaffolds (< 2000 bps)	86.29 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.29

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (88.710 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (15.323 % of family members)
Environment Ontology (ENVO)	Unclassified (32.258 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 4.96% β-sheet: 22.31% Coil/Unstructured: 72.73%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.29
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.29
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF07690	MFS_1	20.16
PF05977	MFS_3	9.68
PF06823	DUF1236	7.26
PF01575	MaoC_dehydratas	3.23
PF00441	Acyl-CoA_dh_1	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG2814	Predicted arabinose efflux permease AraJ, MFS family	Carbohydrate transport and metabolism [G]	9.68
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.71 %
Unclassified	root	N/A	11.29 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.71 %
Unclassified	root	N/A	11.29 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.71 %
Unclassified	root	N/A	11.29 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	86.29 %
Unclassified	root	N/A	11.29 %
Nitrospirae	phylum	All Organisms → cellular organisms → Bacteria → Nitrospirae	0.81 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	83.87 %
Unclassified	root	N/A	11.29 %
Nitrospira	class	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.29 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.26 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	4.84 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	3.23 %
Nitrospirales	order	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.29 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.26 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.84 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	3.23 %
Nitrospiraceae	family	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.29 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.26 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.84 %
Rhodovulum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum	3.23 %
unclassified Nitrospiraceae	no rank	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.29 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.26 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.84 %
unclassified Rhodovulum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum	3.23 %
Nitrospiraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.29 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	7.26 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	4.84 %
Rhodovulum sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp.	3.23 %
Nitrospiraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000891\|JGI10214J12806_11055202	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1001	Open in IMG/M
3300000953\|JGI11615J12901_11037697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	691	Open in IMG/M
3300003911\|JGI25405J52794_10076651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	733	Open in IMG/M
3300004081\|Ga0063454_101346505	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	601	Open in IMG/M
3300004633\|Ga0066395_10219681	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1004	Open in IMG/M
3300005162\|Ga0066814_10093717	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	554	Open in IMG/M
3300005331\|Ga0070670_100989179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	765	Open in IMG/M
3300005332\|Ga0066388_100004328	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	9558	Open in IMG/M
3300005332\|Ga0066388_100232691	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2476	Open in IMG/M
3300005332\|Ga0066388_102790182	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	892	Open in IMG/M
3300005332\|Ga0066388_104869499	All Organisms → cellular organisms → Bacteria → Proteobacteria	683	Open in IMG/M
3300005332\|Ga0066388_105056253	All Organisms → cellular organisms → Bacteria → Proteobacteria	670	Open in IMG/M
3300005332\|Ga0066388_106388748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	594	Open in IMG/M
3300005332\|Ga0066388_108664826	Not Available	506	Open in IMG/M
3300005333\|Ga0070677_10091713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1323	Open in IMG/M
3300005341\|Ga0070691_10306796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	869	Open in IMG/M
3300005355\|Ga0070671_100283769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1409	Open in IMG/M
3300005363\|Ga0008090_15698660	Not Available	556	Open in IMG/M
3300005440\|Ga0070705_100320138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1119	Open in IMG/M
3300005614\|Ga0068856_100361785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1469	Open in IMG/M
3300005713\|Ga0066905_100309602	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1244	Open in IMG/M
3300005713\|Ga0066905_100994346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	739	Open in IMG/M
3300005713\|Ga0066905_101387607	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	635	Open in IMG/M
3300005713\|Ga0066905_101457466	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	622	Open in IMG/M
3300005713\|Ga0066905_101816517	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	562	Open in IMG/M
3300005713\|Ga0066905_101994413	Not Available	538	Open in IMG/M
3300005713\|Ga0066905_102008932	Not Available	537	Open in IMG/M
3300005764\|Ga0066903_100113846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3724	Open in IMG/M
3300005764\|Ga0066903_102124746	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1081	Open in IMG/M
3300005937\|Ga0081455_10017430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6886	Open in IMG/M
3300006038\|Ga0075365_10035877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3211	Open in IMG/M
3300006038\|Ga0075365_10122107	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp.	1797	Open in IMG/M
3300006051\|Ga0075364_11207257	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	513	Open in IMG/M
3300006574\|Ga0074056_11793146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp.	1519	Open in IMG/M
3300006604\|Ga0074060_10021878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1241	Open in IMG/M
3300006844\|Ga0075428_100212145	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp.	2092	Open in IMG/M
3300006844\|Ga0075428_101603353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	680	Open in IMG/M
3300006844\|Ga0075428_101610509	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	679	Open in IMG/M
3300006845\|Ga0075421_101037224	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	926	Open in IMG/M
3300006903\|Ga0075426_11506576	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	511	Open in IMG/M
3300006953\|Ga0074063_10074789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	761	Open in IMG/M
3300006953\|Ga0074063_14238700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	516	Open in IMG/M
3300009092\|Ga0105250_10120633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1078	Open in IMG/M
3300009092\|Ga0105250_10376854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	625	Open in IMG/M
3300009094\|Ga0111539_10337304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1755	Open in IMG/M
3300009098\|Ga0105245_12668214	Not Available	553	Open in IMG/M
3300009147\|Ga0114129_10265051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Rhodovulum → unclassified Rhodovulum → Rhodovulum sp.	2301	Open in IMG/M
3300009176\|Ga0105242_10577301	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1082	Open in IMG/M
3300009792\|Ga0126374_10436314	Not Available	926	Open in IMG/M
3300009792\|Ga0126374_11129291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	623	Open in IMG/M
3300010046\|Ga0126384_11437462	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	644	Open in IMG/M
3300010047\|Ga0126382_10193712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1439	Open in IMG/M
3300010358\|Ga0126370_11085945	Not Available	736	Open in IMG/M
3300010359\|Ga0126376_10120099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2048	Open in IMG/M
3300010360\|Ga0126372_10092244	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2246	Open in IMG/M
3300010360\|Ga0126372_10639144	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1028	Open in IMG/M
3300010361\|Ga0126378_12865063	Not Available	550	Open in IMG/M
3300010362\|Ga0126377_10983701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	909	Open in IMG/M
3300010362\|Ga0126377_12887331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	554	Open in IMG/M
3300010366\|Ga0126379_10956600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	960	Open in IMG/M
3300010366\|Ga0126379_11977870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	686	Open in IMG/M
3300010376\|Ga0126381_103322978	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	634	Open in IMG/M
3300010397\|Ga0134124_10201644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1807	Open in IMG/M
3300010398\|Ga0126383_11188955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	852	Open in IMG/M
3300010398\|Ga0126383_12028693	All Organisms → cellular organisms → Bacteria → Nitrospirae → Nitrospira → Nitrospirales → Nitrospiraceae → unclassified Nitrospiraceae → Nitrospiraceae bacterium	663	Open in IMG/M
3300010398\|Ga0126383_12906471	Not Available	559	Open in IMG/M
3300010403\|Ga0134123_10751006	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	961	Open in IMG/M
3300011000\|Ga0138513_100074276	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	525	Open in IMG/M
3300012212\|Ga0150985_114774764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	511	Open in IMG/M
3300012469\|Ga0150984_105591673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	734	Open in IMG/M
3300012502\|Ga0157347_1047135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	585	Open in IMG/M
3300012930\|Ga0137407_10285176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1506	Open in IMG/M
3300012948\|Ga0126375_10347270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1051	Open in IMG/M
3300012951\|Ga0164300_10223206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	938	Open in IMG/M
3300012951\|Ga0164300_10341529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	800	Open in IMG/M
3300012955\|Ga0164298_11373569	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	545	Open in IMG/M
3300012960\|Ga0164301_10078093	All Organisms → cellular organisms → Bacteria	1821	Open in IMG/M
3300012984\|Ga0164309_10028986	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3013	Open in IMG/M
3300012985\|Ga0164308_10426228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1092	Open in IMG/M
3300015371\|Ga0132258_10480254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3104	Open in IMG/M
3300015372\|Ga0132256_100232364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1905	Open in IMG/M
3300015373\|Ga0132257_102451563	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	677	Open in IMG/M
3300015374\|Ga0132255_101948359	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	894	Open in IMG/M
3300016294\|Ga0182041_10021046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3987	Open in IMG/M
3300017965\|Ga0190266_10189730	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	971	Open in IMG/M
3300017965\|Ga0190266_10596066	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	667	Open in IMG/M
3300018056\|Ga0184623_10244423	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	820	Open in IMG/M
3300018066\|Ga0184617_1048787	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1069	Open in IMG/M
3300018074\|Ga0184640_10296991	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	734	Open in IMG/M
3300021081\|Ga0210379_10136078	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1039	Open in IMG/M
3300021560\|Ga0126371_12341710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	645	Open in IMG/M
3300025900\|Ga0207710_10417752	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	690	Open in IMG/M
3300025934\|Ga0207686_11371786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	581	Open in IMG/M
3300025944\|Ga0207661_11481547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	622	Open in IMG/M
3300025945\|Ga0207679_10215888	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1611	Open in IMG/M
3300027401\|Ga0208637_1000720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2104	Open in IMG/M
3300027874\|Ga0209465_10599845	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	545	Open in IMG/M
3300027907\|Ga0207428_10536736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	847	Open in IMG/M
3300028587\|Ga0247828_10265438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	930	Open in IMG/M
3300028719\|Ga0307301_10017433	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2077	Open in IMG/M
3300028812\|Ga0247825_11096062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	580	Open in IMG/M
3300028819\|Ga0307296_10470633	Not Available	687	Open in IMG/M
3300028828\|Ga0307312_10210397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1250	Open in IMG/M
3300028872\|Ga0307314_10019743	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1531	Open in IMG/M
3300031198\|Ga0307500_10156239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	655	Open in IMG/M
3300031543\|Ga0318516_10010135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4523	Open in IMG/M
3300031546\|Ga0318538_10620748	Not Available	586	Open in IMG/M
3300031549\|Ga0318571_10041113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1338	Open in IMG/M
3300031640\|Ga0318555_10160775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1204	Open in IMG/M
3300031680\|Ga0318574_10085880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1723	Open in IMG/M
3300031681\|Ga0318572_10038206	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2535	Open in IMG/M
3300031740\|Ga0307468_101004656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	734	Open in IMG/M
3300031765\|Ga0318554_10685316	Not Available	575	Open in IMG/M
3300031768\|Ga0318509_10030695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2616	Open in IMG/M
3300031778\|Ga0318498_10119137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1200	Open in IMG/M
3300031782\|Ga0318552_10371685	Not Available	728	Open in IMG/M
3300031860\|Ga0318495_10172595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	974	Open in IMG/M
3300031945\|Ga0310913_10390084	All Organisms → cellular organisms → Bacteria → Proteobacteria	987	Open in IMG/M
3300032012\|Ga0310902_10111398	All Organisms → cellular organisms → Bacteria	1484	Open in IMG/M
3300032043\|Ga0318556_10385341	Not Available	733	Open in IMG/M
3300032089\|Ga0318525_10058227	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1927	Open in IMG/M
3300032174\|Ga0307470_10900175	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	695	Open in IMG/M
3300032211\|Ga0310896_10455541	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	694	Open in IMG/M
3300034354\|Ga0364943_0224382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	696	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.00%
Host-Associated	Host-Associated	25.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.77%
Plants	Host-Associated → Plants	25.00%
Aquatic	Environmental → Aquatic	3.23%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	70.16%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.13%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.65%
Roots	Host-Associated → Plants → Roots	3.23%
Sediment	Environmental → Aquatic → Sediment	2.42%
Freshwater	Environmental → Aquatic → Freshwater	0.81%
Floodplain	Environmental → Terrestrial → Floodplain	0.81%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	52.42%
Loam	Environmental → Terrestrial → Soil → Loam	17.74%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.29%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.23%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.42%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.42%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	2.42%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.81%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.81%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.81%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.06%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	14.52%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	13.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.84%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.23%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.23%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.42%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.42%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	2.42%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.61%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.81%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.81%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.81%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.81%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	15.32%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	14.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.48%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.23%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.42%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.42%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	2.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.42%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.61%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.61%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.61%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.61%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.81%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.81%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.81%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.81%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.81%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Arabidopsis Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.81%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.81%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006604	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006953	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHMB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009092	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012502	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.yng.040610	Host-Associated	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300021081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_coex redo	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027401	Soil and rhizosphere microbial communities from Laval, Canada - mgLAC (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300034354	Sediment microbial communities from East River floodplain, Colorado, United States - 23_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10214J12806_110552022	3300000891	Soil	AAVLTAAPLVAGTAKADPIQVAQADINVRVGGPGVVVEPRHRRHGVVVETVGRSHCRTVTVREWRHGMRVSRTERQCDH*
JGI11615J12901_110376971	3300000953	Soil	AVLTAAPLVAGTAKADPIQVAQADINVRVGGPGVVVEPRHRRHGVVVETVGRSHCRTVTVREWRHGMRVSRTERQCDH*
JGI25405J52794_100766511	3300003911	Tabebuia Heterophylla Rhizosphere	MKNKMVLAMATAAAVLTAAPLFAGPAKADPTQLAQVDVRIGPRAPDVVIDGPRRRPGVVIETEGRRDCRSVTT
Ga0063454_1013465052	3300004081	Soil	MKNALLAIATAAALLTVAPLLAGTATADPIRLAQADINVRVGGPGGPGVSVGEHRRHRRGVVVETTGRSHCRTVTVREWRHGARVTRTERQCG*
Ga0066395_102196812	3300004633	Tropical Forest Soil	MKTMMLAIATAATVLTAAPLLAGTAKADAVRLAQADIDVRIGPRGPGVVIDEPRRRRDVEIETEGRMRRDCRSVTVREWRDGVRVTRTERRCD*
Ga0066814_100937171	3300005162	Soil	MKNALLAIATAAAVLTAAPLLAGTAKADPIRLAQADVDVRIGGRDGPGVVVGTPRRHRHGVVVTDGRSHCRTVTVR
Ga0070670_1009891791	3300005331	Switchgrass Rhizosphere	MKNALLAIATAAAVLTAAPLLAGTAKADPIRLAQADVDVRIGGRDGPGVVVGTPRRHRHGVVVTDGRSHCRTVTVQEWRHGARVTRTE
Ga0066388_10000432811	3300005332	Tropical Forest Soil	MKTIVLAMTAAAAVLTAAPLLGATAKADPVQLAQADVNVRIGPRGPGVVIDEPRHRHGVVIETEGRRNRDCRSVTVSEWRNGVRVTRTERQCD*
Ga0066388_1002326913	3300005332	Tropical Forest Soil	MKQIVLALTMAAAVVTATPLLVQPAGSARADSTQLAQADVDVRIGGPRRPGVVIEEPRRRERGIVVDTEGRGRRDCRSVTVSEWRDGVRVSRTERRCD*
Ga0066388_1027901821	3300005332	Tropical Forest Soil	ATMKRMMLAIATAAAVLTTAPLLAGTARADATQLAQADIDVRIGPRGPGVVIDEPRRRRDVEIETEGRTLRDCRSVTVREWRNGVRVTRTERRCD*
Ga0066388_1048694992	3300005332	Tropical Forest Soil	MKNNMVLALATAAAVLTAAPLLSTTAKADPIQLAQADVDVRVGPRGPGVVIDHPRRRHGVVIETEGRRGCRSVTTKEWRNGVRVTRTERRCD*
Ga0066388_1050562531	3300005332	Tropical Forest Soil	MKTIVLAMTAAAAVLTAAPLLGGTAKADPVQLAQADVDVRIGPRSPGVVIDEPRRRHGVVIETEGRRNRDCRSVTVSEWRNGVRVTRTERQCD*
Ga0066388_1063887481	3300005332	Tropical Forest Soil	MKRMMLAIATAAAVLTTAPLLAGTARAEFIRLAQADIDVRIGPRGPGVVIDEPRRRRDIEVETEGRSLRDCRSVTVREWRNGVRVTRTERRCD*
Ga0066388_1086648262	3300005332	Tropical Forest Soil	MKTMMLAIATAATVLTAAPLLAGTAKADAVRLAQADIDVRIGPRGPGVVIDEPRRRRDVEIETEGRMRRDCRSVTVRGWRDGVRVTRTERRCD*
Ga0070677_100917132	3300005333	Miscanthus Rhizosphere	MKNALLAIATAAAVLTAAPLLAGTAKADPVRLAQADVDVRIGGRDGPGVVVGTPRRHRHGVVVTDGRSHCRTVTVREWRQGARVTRTERQCD*
Ga0070691_103067962	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MKNALLAIATAAAVLTAAPLLAGTAKADPIRLAQADVDVRIGGRDGPGVVVGTPRRHRHGVVVTDGRSHCRTVTVQEWRHGARVTRTERQCD*
Ga0070671_1002837691	3300005355	Switchgrass Rhizosphere	TAAPLLAGTAKADPVRLAQADVDVRIGGRDGPGVVVGTPRRHRHGVVVTDGRSHCRTVTVREWRHGARVTRTERQCD*
Ga0008090_156986601	3300005363	Tropical Rainforest Soil	MTRMMLAIATAAAVLTSAPLLAGTARADATRLAQADVDVRIGPRGPGVVIDEPRRRRGVEIETEGRTLRDCRSVTVREWRDGVRVTRTERRCD*
Ga0070705_1003201381	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	ATAAAVLTAAPLLAGTAKADPIRLAQADVDVRIGGRDGPGVVVGTPRRHRHGVVVTDGRSHCRTVTVREWRHGARVTRTERQCD*
Ga0068856_1003617853	3300005614	Corn Rhizosphere	MKNALLAIATAAAVLTAAPLLAGLLAQADVDVRIGGRDGPGVVVGTPRRHRHGVVVTDGRSHCRTVTVREWRHGARVTRTERQCD*
Ga0066905_1003096022	3300005713	Tropical Forest Soil	MKNKMVLAMATAAAVLTAAPWVAGTAKADPNQLAQVDVRIGPRAPDVVIDGPRRRPGVVIETEGRRDCRSVTTKEWRNGVRVTRTERRCD*
Ga0066905_1009943461	3300005713	Tropical Forest Soil	MKNNMVLALATAAAVLTAAPLFAGTAKADPTQLAQVDVRIGPRAPDAVVVEPRRRPGVVIETEGRRDCRSVTTKEWRNGVRVTRTERRCD
Ga0066905_1013876072	3300005713	Tropical Forest Soil	EATMKRMMLAIATAAAVLTTAPLLAGTARADATQLAQADIDVRIGPRGPGVVIDEPRRRRDVEIETEGRTLRDCRSVTVREWRNGVRVTRTERRCD*
Ga0066905_1014574661	3300005713	Tropical Forest Soil	MKNNMVLAMVTAAAVLTVAPLFAGTAKADPTQLAQVDVRIGPRAPDVVIDGPRRRPGVVIETEGRRDCRSVTTKEWRNGVRVTRTERRCD*
Ga0066905_1018165172	3300005713	Tropical Forest Soil	MKNNMVLALATAAAVLTAAPLLAGTAKADPTRLAQVDVRIGPRAPDAVVVEPRRRPGVVIETEGRRDCRSVTTKEWRNGVRVTRTERRCD*
Ga0066905_1019944131	3300005713	Tropical Forest Soil	MKTMMLAIATAAGVLTAAPLLAGTARADAVRLAQADIDVRIGPRGPGVVIDEPRRRRDIEVETEGRSLRDCRSVTVREWRNGVRVTRTERRCD*
Ga0066905_1020089322	3300005713	Tropical Forest Soil	MKTMVLAMATAAAVLMAVPFFAETAKADPTQLAQVDVRIGPRAPDVVIDGPRRRPGVVIETEGRRDCRSVTTKEWRNGVRVTRTERRCD*
Ga0066903_1001138463	3300005764	Tropical Forest Soil	MKQIVLALTMAAAVVTATPLLVQTAGSARAGSTQLAQADVDVRIGGPRRPGVVVEEPRRRDRDIIVDTEGRGRRDCRSVTVSEWRDGVRVSRTERRCD*
Ga0066903_1021247461	3300005764	Tropical Forest Soil	MKRMMLAIATAAAVLTTAPLLAGTARADATQLAQADIDVRIGPRGPGVVIDEPRRRRDVEIETEGRTLRDCRSVTVREWRNGVRVTRTERRCD*
Ga0081455_100174302	3300005937	Tabebuia Heterophylla Rhizosphere	MKNKMVLAMATAAAVLTAAPLFAGPAKADPTQLAQVDVRIGPRAPDVVIDGPRRRPGVVIETEGRRDCRSVTTKEWRNGVRVTRTERRCD*
Ga0075365_100358776	3300006038	Populus Endosphere	MRTIVLAMTTAGAVLTAAPLLAGSASAGPDQLAQVDVRIGTPPPAVVIDEPRPRRGVVIETEGRRRDCRSVTVSEWRRGTKVTRTERQCD*
Ga0075365_101221072	3300006038	Populus Endosphere	MKTMVLAMATAAAVLTAAPLFAGTAQADPTQLAQVDVRIGPRAPDVVIDGPRRRPGVVIETEGRRDCRSVTTKEWRNGVRVTRTERRC*
Ga0075364_112072572	3300006051	Populus Endosphere	MVLAMATAAAVLTAVPLLTGTAKADPTRLAQVDVRIGPRAPDVVIDGPRRRPGVVIETEGRRDCRSVTTKEWRNGVRVTRTERRCD*
Ga0074056_117931462	3300006574	Soil	MKNALLAIATAAAVLTVAPLLAGTAKADPVRLAQADVDVRIGGRDGPGVVVGTPRRHRHGVVVTDGRSHCRTVTVQEWRHGARVTRTERQCD*
Ga0074060_100218783	3300006604	Soil	KNALLAIATAAAVLTAAPLLAGTAKADPIRLAQADVDVRIGGRDGPGVVVGTPRRHRHGVVVTDGRSHCRTVTVREWRHGARVTRTERQCD*
Ga0075428_1002121452	3300006844	Populus Rhizosphere	MKNNIVLAMATAAAVLTAAPLFAGTAKADPTQLAQVDVRIGPRAPDVVIDQPRRRPGVVIETEGRRDCRTVTTKEWRNGVRVTRTERRCD*
Ga0075428_1016033531	3300006844	Populus Rhizosphere	MKNNVILAMATAAAVLTAAPLLAGTAKADPTRLAQVDVRIGPRAPDVVIDQPRRRPGVVIETEGRRDCRSVTTKEWRNGVRVT
Ga0075428_1016105091	3300006844	Populus Rhizosphere	MKTMVLAMATAAAVLTAAPLFAGTAQADPTQLAQVDVRIGPRAPDVVIDGPRRRPGVVIETEGRRDCRSVTTKEWRNGVRVTRTER
Ga0075421_1010372242	3300006845	Populus Rhizosphere	MKTMVLAMATAAAVLTAAPLFAGTAQADPTQLAQVDVRIGPRAPDVVIDGPRRRPGVVIETEGRRDCRSVTTKEWRNGVRVTRTERRCD*
Ga0075426_115065762	3300006903	Populus Rhizosphere	AAAAAVLTAAPLVAGTAKADPIQVAQADINVRVGSPGVVVEPRHRRHGVVVETVGRSHCRTVTVREWRHGMRVSRTERQCDH*
Ga0074063_100747892	3300006953	Soil	MKNALLAIATAAAVLTAAPLLAGTAKADPVRLAQADVDVRIGGRGGPGVVVGTPRRYRHGVVVTDGRSHCRTVTVREWRHGARVTRTERQCG*
Ga0074063_142387001	3300006953	Soil	RGTTMKNALLAIATAAAVLTAAPLLAGTAKADPVRLAQADVDVRIGGRGGPGVVVETPRRHRRDVVVTDGRSNCRTVTVREWRHGARVTRTERQCDR*
Ga0105250_101206331	3300009092	Switchgrass Rhizosphere	APLLAGTAKADPIRLAQADVDVRIGGRDGPGVVVGTPRRHRHGVVVTDGRSHCRTVTVQEWRHGARVTRTERHCG*
Ga0105250_103768541	3300009092	Switchgrass Rhizosphere	MKNALLAIATAAAVLTAAPLLAGTAKADPIRLAQADVDVRIGGRNGPGVVVGTPRRHRHGVVVTDGRSHCRTVTVREWRHGARVTRTERQCD*
Ga0111539_103373041	3300009094	Populus Rhizosphere	MKNKMVLAMATAAVVLTAAPLFAGAAKADPTQLAQVDVRVGPRAPDVVIDHPRRRPGVVIETEGRRDCRSVTTKEWRNGVRVTRTERRC*
Ga0105245_126682141	3300009098	Miscanthus Rhizosphere	MKNALLAIATAAAVLTAAPLLAGTAKADPIRLAQADVDVRIGGRDGPGVVVGTPRRHRHGVVVTDGRSHCRTVTVQEWRHGARVTRTER
Ga0114129_102650512	3300009147	Populus Rhizosphere	MKNNVILAMATAAAVLTAAPLLAGTAKADPTRLAQVDVRIGPRAPDVVIDQPRRRPGVVIETEGRRDCRSVTTKEWRNGVRVTRTERRCD*
Ga0105242_105773011	3300009176	Miscanthus Rhizosphere	GTTMKNALLAIATAAAVLTAAPLLAGTAKADPVRLAQADVDVRIGGRGGPGVVVETPRRHRRDVVVTDGRSNCRTVTVREWRHGARVTRTERQCDR*
Ga0126374_104363141	3300009792	Tropical Forest Soil	MKSMMLAIATAAAVLTTAPLLAGTARADATQLAQADIDVRIGPRGPGVVIDEPRRRRDVEIETEGRTLPDCRSVTVRDSRNALRLTRTERRCD*
Ga0126374_111292912	3300009792	Tropical Forest Soil	MKTIVLAMAAAAAVLTAAPLLGGTAKADPVQLAQADVNVRIGPRGPGVVIDEPRHRHGVVIETEGRRNRDCRSVTVSEWRNGVRVTRTERQCD*
Ga0126384_114374621	3300010046	Tropical Forest Soil	MKNKMVLAMATAAVVLTAAPLFAGAAKADPTQLAQVDVRVGPRAPDVVIDHPRRRPGVVIETEGRRDCRSVTTKEWRNGVRVTRTERRCD*
Ga0126382_101937121	3300010047	Tropical Forest Soil	MKTMMLAIATAAAVLTTAPLLAGTAKADSVRLAQADIDVRIGPRGPGVVIDEPRRRRDVEIETEGRTLRDCRSVTVREWRNGVRVTRTERRCD*
Ga0126370_110859452	3300010358	Tropical Forest Soil	MKTMMLAIATAAGVLTAAPLLAGTARADAVRLAQADIDVRIGPRGPGVVIDEPRRRRDVEIETEGRMRRDCRSVTVREWRDGVRVTRTERRCD*
Ga0126376_101200992	3300010359	Tropical Forest Soil	MKNKMILAMATAAVVLTAAPLFAGAAKADPTQLAQVDVRVGPRAPDVVIDHPRRRPRVVIETEGRRDCRSVTTKEWRNGVRVTRTERRCD*
Ga0126372_100922444	3300010360	Tropical Forest Soil	MKTIVLAMTAAAAVLTAAPLLGGTAKADPVQLAQADVDVRIGPRGPGVVIDEPRRRHGVVIETEGRRNRDCRSVTVSEWRNGVRVTRTE
Ga0126372_106391441	3300010360	Tropical Forest Soil	MKRMMLAIATAAAVLTTAPLLAGTARAEFIRLAQADIDVRIGPRGPGVVIDEPRRRRDVEIETEGRTLRDCRSVTVREWRNGVRVTRTERRCD*
Ga0126378_128650631	3300010361	Tropical Forest Soil	MKTMMLAIATAAGVLTAAPLLAGTARADAVRLAQADIDVRIGPRGPGVVIDEPRRRRDIEVETEGRSLRDCRSVTVREWRNGVRVTRTERRCN*
Ga0126377_109837012	3300010362	Tropical Forest Soil	MKNNMVLALATAAAVLTAAPLLAGTAKADPTRLAQVDVRIGPRAPDAVVVEPRRRPGVVIETEGRRDCRSVTTKEWRNGVRVTRTERRCG*
Ga0126377_128873312	3300010362	Tropical Forest Soil	AAVVTATPLLVQPAGSARADSTQLAQADVDVRIGGPRRPGVVVEEPRRRDRDIIVDTEGRGRRDCRSVTVSEWRDGARVSRTERRCD*
Ga0126379_109566002	3300010366	Tropical Forest Soil	MKTMMLAIATAATVLTAAPLLAGTAKADSVRLAQADIDVRIGPRGPGVVIDEPRRRRDVEIETEGRMRRDCRSVTVREWRDGVRVTRTERRCD*
Ga0126379_119778702	3300010366	Tropical Forest Soil	MKTMMLAIATAAGVLTTAPLLAGTARADAVRLAQADIDVRIGPRGPGVVIDEPRRRRDIEVETEGRSLRDCRSVTVREWRNGVRVTRTERRCD*
Ga0126381_1033229781	3300010376	Tropical Forest Soil	MKPMVLAIVTAAAVLTAAPLLAGTARADAIRLAQADVDVRIGPRGPGVVIDEPRRRRDVEIETEGRMRRDCRSVTVREWRDGVRVTRTERRCD*
Ga0134124_102016442	3300010397	Terrestrial Soil	MKNALLAIATAAAVLTVAPLLAGTAKADPVRLAQADVDVRIGGRDGPGVVVGTPRRHRHGVVVTDGRSHCRTVTVQEWRQARGSRAPSGTAAEGGLIRT*
Ga0126383_111889551	3300010398	Tropical Forest Soil	MAAAVVTATPLLVQTAGSARAGSTQLAQADVDVRIGGPRRPGVVVEEPRRRDRDIIVDTEGRGGRNCRSVTVSEWRDGARVSRTERRCD*
Ga0126383_120286931	3300010398	Tropical Forest Soil	MKPMVLAIVTAAAVLTAAPLLAGTARADATRLAQADIDVRIGPRGPGVVIDEPRRRRDVEIETEGRMRRDCRSVTVREWRDGVRVTRTERRCD*
Ga0126383_129064711	3300010398	Tropical Forest Soil	MTRMMLAIATAAAVLTTAPLLAGTARADSIRLAQADIDVRIGPRGPGVVIDEPRRRRDVEIETEGRTLRDCRSVTVREWRDGVRVTRTERRCD*
Ga0134123_107510061	3300010403	Terrestrial Soil	MKNALLAIATAAAVLTAAPLLAGTAKADPVRLAQADVDVRIGGRGGPGVVVETPRRHRRDVVVTDGRSNCRTVTVREWRHGARVTRTERQCD*
Ga0138513_1000742761	3300011000	Soil	TAAPLLAETAKADPMRLAQADVDVRIGGRDGPGVVVGTPRRHRHGVVVTDGRSHCRTVTVREWRHGARVTRTERQCD*
Ga0150985_1147747642	3300012212	Avena Fatua Rhizosphere	MKNALLAIATAAAVLTAAPLLAGTAKADPVRLAQADVDVRIGGRDGPGVVVGTPRRPRHGVVVTDGRSHCRTVTVREWRHGARVTRTERQCG*
Ga0150984_1055916732	3300012469	Avena Fatua Rhizosphere	ATAAALLTVAPLLAGTATADPIRLAQADINVRVGGPGGPGVSVGEHRRHRRGVVVETTGRSHCRTVTVREWRHGARVTRTERQCG*
Ga0157347_10471352	3300012502	Arabidopsis Rhizosphere	MKNALLAIATAAAVLTAAPLLAGTAKADPVRLAQADVDVRIGGRGGPGVVVETPRRHRRDVVVTDGRSNCRTVTVREWRHGARVTHTERQCG*
Ga0137407_102851762	3300012930	Vadose Zone Soil	MKSIVIAMTTAAAVMTAAPMLAGAAKADPLRLAQADVDVRIGPRGPGVVIEEPRRRPGVVIETEGRRNRDCRSVSVTEWQNGVKVTRTERQCDR*
Ga0126375_103472702	3300012948	Tropical Forest Soil	MKTMMLAIATAAGVLTAAPLLAGTARADAVRLAQADIDVRIGPRGPGVVIDEPRRRRDVEIETEGRTRDCRSVTVREWRNGVRVTRTERRCD*
Ga0164300_102232062	3300012951	Soil	MKNALLAIATAAAVLTAAPLLAGTAKADPIRLAQADVDVRIGGRDGPGVVVGTPRRHRHGVVVTDGRSHCRTVTVQEWRHGARVTRTERQCG*
Ga0164300_103415291	3300012951	Soil	MKNALLAIATAAAVLTAAPLLAGTAKADPVRLAQADVDVRIGGRGGPGVVVETPRRHRRDVVATDGRSNCRTVTVREWRHGARVTRTER
Ga0164298_113735691	3300012955	Soil	MKNALLAIATAAAVLTAAPLLAGTAKADPVRLAQADVDVRIGGRGGPGVVVETPRRHRRDVVVTDGRSNCRTVTVREWRHGARVTRTERQCDR*
Ga0164301_100780933	3300012960	Soil	MKNALLAIATAAAVLTAAPLLAGTAKADPIRLPQADVDVRIGGRDGPGVVVGTPRRHRHGVVVTDGRSHCRTVTVQEWRHGARVTRTERHCG*
Ga0164309_100289861	3300012984	Soil	LLAIATAAAVLTAAPLLAGTAKADPIRLAQADVDVRIGGRDGPGVVVGTPRRHRHGVVVTDGRSHCRTVTVQEWRHGARVTRTERHCG*
Ga0164308_104262282	3300012985	Soil	MKNALLAIATAAAVLTAAPLLAGTAKADPVRLAQADVDVRIGGRDGPGVVVGTPRRHRHGVVVTDGRSHCRTVTVQEWRHGARVTRTERQCD*
Ga0132258_104802543	3300015371	Arabidopsis Rhizosphere	MKTMVLAMATEAAVLTAAPLFAGTAKADPTQLAQVDVRVGPRAPDVVIDGPRRRPGVVIETEGRRDCRSVTTKEWRNGVRVTRTERRCD*
Ga0132256_1002323642	3300015372	Arabidopsis Rhizosphere	MKTMVLAMATAAAVLTAAPLFAGTAKADPTQLAQVDVRVGPRAPDVVIDGPRRRPGVVIETEGRRDCRSVTTKEWRNGVRVTRTERRCD*
Ga0132257_1024515631	3300015373	Arabidopsis Rhizosphere	AAAVLTAAPLLAGTAKADPIQVAQADINVRVGGPGVVVEPRHRRHGVVVETVGRSHCRTVTVREWRHGMRVSRTERQCDH*
Ga0132255_1019483591	3300015374	Arabidopsis Rhizosphere	MATAAAVLMAVPFFAETAKADPTQLAQVDVRIGPRAPDVVIDGPRRRPGVVIETEGRRDCRSVTTKEWRNGVRVTRTERRCD*
Ga0182041_100210464	3300016294	Soil	MKRMMLAIATAAAVLTTAPLLAGTARADSTRLAQADVDVRIGPRGPGVVIDEPRRRRDVEIETEGRTLRDCRSVNVREWRNGVWVTRTERRCD
Ga0190266_101897302	3300017965	Soil	MSMVPFSRTWPSMSVVPLLAGTAKADPVRLAQADVDVRIGGRDGPGVVVGTPRRHRHGVVVTDGRSHCRTVTVREWRHGARVTRTERQCG
Ga0190266_105960661	3300017965	Soil	VLTAAPLLAGTAKADSVRLAQADVDVRIGGQDGPGVVVGTPRRHRHGVVVTDGRSHCRTVTVREWRHGARVTRTERHCG
Ga0184623_102444232	3300018056	Groundwater Sediment	MRTIVIAITTAAAVLTAAPMLAGSANADTFRLAQVDVDVRVGGPRGPGVVIEEPRRGPGIVIDTDGRRNRDCRSVTVSEWQNGVKVTRTERQCDR
Ga0184617_10487872	3300018066	Groundwater Sediment	FAIATAAAVLTAAPLLAGTAKADPIRLAQADVNVRIGGPGVVVGEPRRHRRGVVVETDGRAHCRTVTVREWRHGMRVTRTERQCDR
Ga0184640_102969912	3300018074	Groundwater Sediment	MKNALLAIATAAAVLTAAPLLAGTAKADPVRLAQADVDVRIGGRDGPGVVVGTPRRHRHGVVVTDGRSHCRTVTVREWRHG
Ga0210379_101360782	3300021081	Groundwater Sediment	MKTIAIAVMTAAAVWTAAPMLAGTASADPMRLAQADVDIRIGPRGPGVVIEERRRPGVVIETEGRRNRDCRSVTVTEWQNGERVKRTERRCD
Ga0126371_123417102	3300021560	Tropical Forest Soil	MKQIVLALTMAAAVVTATPLLVQTAGSARAGSTQLAQADVDVRIGGPRRPGVVVEEPRRRDRDIIVDTEGRGRRDCRSVTVSEWRDGVRVSRTERRCD
Ga0207710_104177521	3300025900	Switchgrass Rhizosphere	AIATAAAVLTVAPLLAGTAKADPVRLAQADVDVRIGGRDGPGVVVGTPRRHRHGVVVTDGRSHCRTVTVQEWRHGARVTRTERHCG
Ga0207686_113717861	3300025934	Miscanthus Rhizosphere	MKNALLAIATAAAVLTAAPLLAGTAKADPIRLAQADVDVRIGGRDGPGVVVGTPRRHRHGVVVTDGRSHCRTVTVREWRHGAR
Ga0207661_114815472	3300025944	Corn Rhizosphere	MKNALLAIATAAAVLTAARLLAGTAKADPIRLAQADVDVRIGGRDGPGVVVGTPRRHRHGVVVTDGRSHCRTVTVREWRHGARVTRTERQCD
Ga0207679_102158882	3300025945	Corn Rhizosphere	MKNALLAIATAAAVLTAAPLLAGTAKADPIRLAQADVDVRTGGRDGPGVVVGTPRRHRHGVVVTDGRSHCRTVTVREWRHGARVTRTERQCD
Ga0208637_10007202	3300027401	Soil	MKNALLAIATAAAVLTAAPLLAGTAKADPVRLAQADVDVRIGGRDGPGVVVGTPRRHRHGVVVTDGRSHCRTVTVQEWRHGARVTRTERQCD
Ga0209465_105998452	3300027874	Tropical Forest Soil	MKTMMLAIATAAGVLTAAPLLAGTARADAVRLAQADIDVRIGPRGPGVVIDEPRRRRDIEVETEGRSLRDCRSVTVREWRNGVRVTRTERRCD
Ga0207428_105367362	3300027907	Populus Rhizosphere	MKTMVLAMATAAAVLTAAPLLAGTAKADPIRLAQADVDVRIGGRDGPGVVVGTPRRHRHGVVVTDGRSHCRTVTVREWRH
Ga0247828_102654382	3300028587	Soil	VLTAAPLLAGTAKADPVRLAQADVDVRIGGRDGPGVVVGTPRRHRHGVVVTDGRSHCRTVTVREWRHGARVTRTERHCG
Ga0307301_100174331	3300028719	Soil	MKATLLAIATAAAVLTAAPLLAGTAKADPTRLAQADVNVRIGGPGVVVGEPRRHRRGVVVETDGRAHCRTVTVREWRHGMRVTRTERQCDR
Ga0247825_110960621	3300028812	Soil	LTAAPLLAGTAKADPIRLAQADVDVRIGGRDGPGVVVGTPRRHRHGVVVTDGRSHCRTVTVREWRHGARVTRTERHCD
Ga0307296_104706331	3300028819	Soil	MKTTLLATATAAAVLTAAPLLAGTAKANLRIGGPGVVVGEPRHHRRGVVVETDGRAHCRTVTVREWRHGMRVTRTERQCDR
Ga0307312_102103972	3300028828	Soil	VLTAAPLLAGTAKADPIRLAQADANLRIGGPGVVVGEPRHHRRGVVVETDGRAHCRTVTVREWRHGMRVTRTERQCDR
Ga0307314_100197432	3300028872	Soil	MKNALLAIATAAAVLTAAPLLAGTAKADPVRLAQADVDVRIGGRGGPGVVVGTPRRHRHGVVVTDGQSHCRTVTVREWRHGARVTRTERQCD
Ga0307500_101562392	3300031198	Soil	MRTIVVAMTTAAAVLTAAPMLAGTANADNVRLAQVDVDVRVGGPRGPGVVIEEPRRGPGIVIDTDGRRNRDCRSVTVSEWQNGVKVTRTERQCDR
Ga0318516_100101354	3300031543	Soil	MKRMMLAIATAAAVLTTAPLLAGTARADSTRLAQADVDVRIGPRGPGVVIDEPRRRRDVEIETEGRTLRDCRSVNVREWRNGVRVTRTERRCD
Ga0318538_106207482	3300031546	Soil	MKRMMLAIATAAAVLTTAPLLAGTARADSTRLAQADVDVGIGPRGPGVVIDEPRRRRDVEIETEGRTLRDCRSVNVREWRNGVRVTRTERRCD
Ga0318571_100411132	3300031549	Soil	MKRMMLAIATAAAVLTTAPLLAGTARADSTRLAQADVDVRIGPRGPGVVIDEPRRRRDVEIETEGRTLRDCRSVTVREWRNGVWVTRTERRCD
Ga0318555_101607751	3300031640	Soil	MKRMMLAIATAAAVLTTAPLLAGTARADSTRLAQADVDVRIGPRGPGVVIDEPRRRRDVEIETEGHTLRDCRSVNVREWRNGVRVTRTERRCD
Ga0318574_100858803	3300031680	Soil	MKRMMLAIATAAAVLTTAPLLAGTARADSTRLAQADVDVRIGPRGPGVVIDEPRRRRDVEIETEGRTLRDCRSVTVREWRNGVWVT
Ga0318572_100382064	3300031681	Soil	MKRMMLAIATAAAVLTTAPLLAGTARADSTRLAQADVDVRIGPRGPGVVIDEPRRRRDVEIETEGRTLRDCRSVTVREWRNG
Ga0307468_1010046562	3300031740	Hardwood Forest Soil	MKSIVIVITTATAVLTAAPMLAGSAKADPVRLAQVDVDVRVGGPRGPGVVIDTDGRRNRDCRTVTVSEWHNGVKVVRTERRCDR
Ga0318554_106853161	3300031765	Soil	TMKRMMLAIATAAAVLTTAPLLAGTARADSTRLAQADVDVRIGPRGPGVVIDEPRRRRDVEIETEGRTLRDCRSVTVREWRNGVWVTRTERRCD
Ga0318509_100306951	3300031768	Soil	MKRMMLAIATAAAVLTTAPLLAGTARADSTRLAQADVDVRIGPRGPGVVIDEPRRRRDVEIETEGRTLRDCRSVNVR
Ga0318498_101191372	3300031778	Soil	MKRMMLAIATAAAVLTTAPLLAGTARADSTRLAQADVDVRIGPRGPGVVIDEPRRRRDVEIETEGRTLRDCRSVNAREWRNGVWVTRTERRCD
Ga0318552_103716851	3300031782	Soil	AIATAAAVLTTAPLLAGTARADSTRLAQADVDVRIGPRGPGVVIDEPRRRRDVEIETEGRTLRDCRSVNVREWRNGVRVTRTERRCD
Ga0318495_101725952	3300031860	Soil	MKRMMLAIATAAAVLTTAPLLAGTARADSTRLAQADVDVRIGPRGPGVVIDEPRRRRDVEIETEGRTLRDCRSVNVRE
Ga0310913_103900841	3300031945	Soil	MKRMMLAIATAAAVLTTAPLLAGTARADSTRLAQADVDVRIGPRGPGVVIDEPRRRRDVEIETEGRTLRDCRSVTVREWRNGVRVTRTERRCD
Ga0310902_101113981	3300032012	Soil	MKNALLAIATAAAVLTAAPLLAGTAKADPVRLAQADVDVRIGGRGGPGVVVETPRRHRRDVVATDGRSNCRTVTVREWRHGARVTRTERQCD
Ga0318556_103853411	3300032043	Soil	MKRMMLAIATAAAVLTTAPLLAGTARADSTRLAQADVDVRIGPRGPGVVIDEPRRRRDVEIETEGRTLRDCRSVNVREWRNGVRVTRTEQRCD
Ga0318525_100582273	3300032089	Soil	MKRMMLAIATAAAVLTTAPLLAGTARADSTRLAQADVDVRIGPRGPGVVIDEPRRRRDVEIETEGRTLRDCRSVTVRE
Ga0307470_109001752	3300032174	Hardwood Forest Soil	PMKNKMMLAMATAAAVLTAAPLLAETAKADPTQLAQVDVRIGPRAPDVVIDGPRRRPGVVIETEGRRDCRSVTTKEWRNGVRVTRTERRCD
Ga0310896_104555412	3300032211	Soil	MKNALLAIATAAAVLTAAPLLAGTAKADPIRLAQADVDVRIGGRDGPGVVVGTPRRHRHGVVVTDGRSHCRTVTVQEWRHGARVTRTERQCG
Ga0364943_0224382_288_554	3300034354	Sediment	MTTAAAVLTAAPMLAGSANADNVRLAQVDVDVRVGGPRGPGVVIEEPRRGPGIVIDTDGRRNRDCRSVTVSEWQNGVKVTRTERRCDR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F068802

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences