Metagenome / Metatranscriptome Family F068798

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F068798
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	95 residues
Representative Sequence	DEGENAHSAFFVLEQQTFLVLTWDPDRGREVGGAVRLELAADEIESEVERLETHGIGGRVTRTRFGTEVYDLADPDGHLVRIGPAWTLHAIEGAV
Number of Associated Samples	109
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	90.32 %
% of genes from short scaffolds (< 2000 bps)	88.71 %
Associated GOLD sequencing projects	106
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.54

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (91.129 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (26.613 % of family members)
Environment Ontology (ENVO)	Unclassified (36.290 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.774 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 11.38% β-sheet: 28.46% Coil/Unstructured: 60.16%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.54
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.54
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF00781	DAGK_cat	39.52
PF02643	DUF192	9.68
PF12681	Glyoxalase_2	6.45
PF14378	PAP2_3	4.84
PF16976	RcpC	0.81
PF02225	PA	0.81
PF07228	SpoIIE	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG1597	Phosphatidylglycerol kinase, diacylglycerol kinase family	Lipid transport and metabolism [I]	79.03
COG1430	Uncharacterized conserved membrane protein, UPF0127 family	Function unknown [S]	9.68

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.13 %
Unclassified	root	N/A	8.87 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.13 %
Unclassified	root	N/A	8.87 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.13 %
Unclassified	root	N/A	8.87 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	85.48 %
Unclassified	root	N/A	8.87 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	85.48 %
Unclassified	root	N/A	8.87 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	76.61 %
Unclassified	root	N/A	8.87 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	72.58 %
Unclassified	root	N/A	8.87 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	4.03 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	72.58 %
Unclassified	root	N/A	8.87 %
Gordoniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae	3.23 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	72.58 %
Unclassified	root	N/A	8.87 %
Gordonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia	3.23 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	72.58 %
Unclassified	root	N/A	8.87 %
Gordonia terrae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia → Gordonia terrae	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_111929062	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	562	Open in IMG/M
3300000956\|JGI10216J12902_113252906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	885	Open in IMG/M
3300002123\|C687J26634_10288114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	552	Open in IMG/M
3300003992\|Ga0055470_10100209	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	714	Open in IMG/M
3300003993\|Ga0055468_10142752	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	708	Open in IMG/M
3300003998\|Ga0055472_10151593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	689	Open in IMG/M
3300004114\|Ga0062593_101634740	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia	701	Open in IMG/M
3300004114\|Ga0062593_103001595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia → Gordonia terrae	540	Open in IMG/M
3300004156\|Ga0062589_100963738	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	793	Open in IMG/M
3300004156\|Ga0062589_102207986	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300004463\|Ga0063356_101751798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	931	Open in IMG/M
3300004480\|Ga0062592_102088160	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	562	Open in IMG/M
3300004643\|Ga0062591_101203746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	738	Open in IMG/M
3300005341\|Ga0070691_10866569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300005343\|Ga0070687_100643227	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia	734	Open in IMG/M
3300005345\|Ga0070692_10652101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	703	Open in IMG/M
3300005365\|Ga0070688_101712631	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	515	Open in IMG/M
3300005440\|Ga0070705_101508949	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	563	Open in IMG/M
3300005466\|Ga0070685_11350543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300005544\|Ga0070686_100632240	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Gordoniaceae → Gordonia	847	Open in IMG/M
3300005713\|Ga0066905_102241218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	510	Open in IMG/M
3300005887\|Ga0075292_1049063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	609	Open in IMG/M
3300006576\|Ga0074047_11505853	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	606	Open in IMG/M
3300006844\|Ga0075428_101238675	All Organisms → cellular organisms → Bacteria	786	Open in IMG/M
3300006847\|Ga0075431_101458129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	643	Open in IMG/M
3300006853\|Ga0075420_100774193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	826	Open in IMG/M
3300006969\|Ga0075419_10217734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1268	Open in IMG/M
3300009100\|Ga0075418_11332985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	778	Open in IMG/M
3300009810\|Ga0105088_1074475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	601	Open in IMG/M
3300009815\|Ga0105070_1127909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514	Open in IMG/M
3300010037\|Ga0126304_10116304	All Organisms → cellular organisms → Bacteria	1705	Open in IMG/M
3300010042\|Ga0126314_11178605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	572	Open in IMG/M
3300010166\|Ga0126306_11310104	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	598	Open in IMG/M
3300010391\|Ga0136847_13516220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	779	Open in IMG/M
3300010396\|Ga0134126_12629140	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	547	Open in IMG/M
3300010400\|Ga0134122_10749319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	925	Open in IMG/M
3300010403\|Ga0134123_11372860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	745	Open in IMG/M
3300010938\|Ga0137716_10261814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	962	Open in IMG/M
3300012093\|Ga0136632_10001256	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8450	Open in IMG/M
3300012358\|Ga0137368_10341861	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	998	Open in IMG/M
3300012891\|Ga0157305_10073873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	787	Open in IMG/M
3300012895\|Ga0157309_10216490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	608	Open in IMG/M
3300012901\|Ga0157288_10379286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	522	Open in IMG/M
3300012902\|Ga0157291_10103022	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	780	Open in IMG/M
3300012904\|Ga0157282_10412280	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	509	Open in IMG/M
3300012910\|Ga0157308_10395964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M
3300013306\|Ga0163162_10929897	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	981	Open in IMG/M
3300013307\|Ga0157372_12475221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	596	Open in IMG/M
3300014267\|Ga0075313_1153761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	593	Open in IMG/M
3300014270\|Ga0075325_1040537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	958	Open in IMG/M
3300014302\|Ga0075310_1025130	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1096	Open in IMG/M
3300014326\|Ga0157380_12283679	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	605	Open in IMG/M
3300014969\|Ga0157376_10156863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2059	Open in IMG/M
3300017997\|Ga0184610_1243309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	599	Open in IMG/M
3300018051\|Ga0184620_10330524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	516	Open in IMG/M
3300018052\|Ga0184638_1213527	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	675	Open in IMG/M
3300018054\|Ga0184621_10187401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	743	Open in IMG/M
3300018422\|Ga0190265_10368248	All Organisms → cellular organisms → Bacteria	1528	Open in IMG/M
3300018422\|Ga0190265_11678990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	745	Open in IMG/M
3300018481\|Ga0190271_11786532	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	727	Open in IMG/M
3300019377\|Ga0190264_11955410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	535	Open in IMG/M
3300019884\|Ga0193741_1118495	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	671	Open in IMG/M
3300021078\|Ga0210381_10023562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1664	Open in IMG/M
3300021078\|Ga0210381_10171184	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	746	Open in IMG/M
3300021080\|Ga0210382_10268933	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	747	Open in IMG/M
3300021445\|Ga0182009_10444905	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	676	Open in IMG/M
3300022915\|Ga0247790_10074765	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	808	Open in IMG/M
3300023064\|Ga0247801_1006955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1348	Open in IMG/M
3300025312\|Ga0209321_10520537	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300025322\|Ga0209641_10877234	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	595	Open in IMG/M
3300025940\|Ga0207691_11701034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	511	Open in IMG/M
3300025960\|Ga0207651_11091592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	715	Open in IMG/M
3300025972\|Ga0207668_10101607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2138	Open in IMG/M
3300025972\|Ga0207668_11686710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	572	Open in IMG/M
3300026051\|Ga0208911_1009721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	885	Open in IMG/M
3300027163\|Ga0209878_1054034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	506	Open in IMG/M
3300027169\|Ga0209897_1050196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	610	Open in IMG/M
3300027209\|Ga0209875_1030758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	642	Open in IMG/M
3300027324\|Ga0209845_1018623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1140	Open in IMG/M
3300027647\|Ga0214468_1029410	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1474	Open in IMG/M
3300027650\|Ga0256866_1023664	All Organisms → cellular organisms → Bacteria	1577	Open in IMG/M
3300027682\|Ga0209971_1104579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	694	Open in IMG/M
3300027961\|Ga0209853_1120992	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	652	Open in IMG/M
3300028587\|Ga0247828_10846839	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	584	Open in IMG/M
3300028707\|Ga0307291_1110207	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	689	Open in IMG/M
3300028715\|Ga0307313_10128505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	777	Open in IMG/M
3300028719\|Ga0307301_10170538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	703	Open in IMG/M
3300028721\|Ga0307315_10084232	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	921	Open in IMG/M
3300028722\|Ga0307319_10082247	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1024	Open in IMG/M
3300028744\|Ga0307318_10122722	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	885	Open in IMG/M
3300028755\|Ga0307316_10025441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1911	Open in IMG/M
3300028768\|Ga0307280_10339419	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	553	Open in IMG/M
3300028771\|Ga0307320_10204976	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	771	Open in IMG/M
3300028771\|Ga0307320_10466703	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	509	Open in IMG/M
3300028796\|Ga0307287_10348588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	558	Open in IMG/M
3300028811\|Ga0307292_10449429	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	550	Open in IMG/M
3300028811\|Ga0307292_10514588	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	514	Open in IMG/M
3300028880\|Ga0307300_10346886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	511	Open in IMG/M
3300028881\|Ga0307277_10348516	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	659	Open in IMG/M
3300028881\|Ga0307277_10516416	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	536	Open in IMG/M
3300028889\|Ga0247827_10399538	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300030006\|Ga0299907_10802668	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	709	Open in IMG/M
3300031228\|Ga0299914_10228710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1647	Open in IMG/M
3300031228\|Ga0299914_10494898	All Organisms → cellular organisms → Bacteria	1056	Open in IMG/M
3300031228\|Ga0299914_10631715	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	911	Open in IMG/M
3300031228\|Ga0299914_11329025	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	569	Open in IMG/M
3300031229\|Ga0299913_12029258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	521	Open in IMG/M
3300031576\|Ga0247727_11093229	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300031847\|Ga0310907_10649636	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	579	Open in IMG/M
3300031908\|Ga0310900_10459441	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	981	Open in IMG/M
3300031940\|Ga0310901_10355650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	628	Open in IMG/M
3300031949\|Ga0214473_11582526	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	657	Open in IMG/M
3300032013\|Ga0310906_10665889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	724	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.29%
Host-Associated	Host-Associated	13.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	75.81%
Plants	Host-Associated → Plants	13.71%
Aquatic	Environmental → Aquatic	10.48%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	75.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	10.48%
Freshwater	Environmental → Aquatic → Freshwater	4.03%
Sediment	Environmental → Aquatic → Sediment	3.23%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.23%
Marine	Environmental → Aquatic → Marine	2.42%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.81%
Cave	Environmental → Terrestrial → Cave	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.84%
Loam	Environmental → Terrestrial → Soil → Loam	9.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.26%
Sand	Environmental → Terrestrial → Soil → Sand	5.65%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.23%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.23%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.23%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.42%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.42%
Lake	Environmental → Aquatic → Freshwater → Lake	0.81%
Ice	Environmental → Aquatic → Freshwater → Ice	0.81%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.81%
Unclassified	Environmental → Terrestrial → Cave → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	34.68%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.26%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.45%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	6.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.45%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.65%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	5.65%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.84%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.23%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.23%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.23%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.42%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.42%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.61%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	1.61%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	0.81%
Unclassified	Environmental → Aquatic → Freshwater → Ice → Unclassified	0.81%
Neutral	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Neutral	0.81%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.81%
Unclassified	Environmental → Terrestrial → Cave → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	26.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	6.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.65%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	5.65%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	4.84%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	4.03%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.03%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.23%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.23%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.23%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	2.42%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.42%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.42%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.42%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.61%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	1.61%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.61%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Sediment	0.81%
Polar Desert Sand	Environmental → Aquatic → Freshwater → Ice → Unclassified → Polar Desert Sand	0.81%
Hot Spring Fe-Si Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Neutral → Hot Spring Fe-Si Sediment	0.81%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.81%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.81%
Biofilm	Environmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300002123	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_3	Environmental	Open in IMG/M
3300003992	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D1	Environmental	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300003998	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005887	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_403	Environmental	Open in IMG/M
3300006576	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009810	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30	Environmental	Open in IMG/M
3300009815	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_0_10	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010391	Freshwater sediment microbial communities from Lake Superior, USA - Station SU-17. Combined Assembly of Gp0155404, Gp0155335, Gp0155336, Gp0155336, Gp0155403, Gp0155406	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010938	Sediment microbial community from Chocolate Pots hot springs, Yellowstone National Park, Wyoming, USA. Combined Assembly of Gp0156111, Gp0156114, Gp0156117	Environmental	Open in IMG/M
3300012093	Polar desert sand microbial communities from Dry Valleys, Antarctica - metaG UQ611 (21.06)	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012891	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S148-409B-2	Environmental	Open in IMG/M
3300012895	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S208-509C-2	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012902	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S169-409C-1	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012910	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014267	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailC_D1	Environmental	Open in IMG/M
3300014270	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D1	Environmental	Open in IMG/M
3300014302	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D2	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018051	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_b1	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021080	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_coex redo	Environmental	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300022915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S171-409R-4	Environmental	Open in IMG/M
3300023064	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S001-104B-6	Environmental	Open in IMG/M
3300025312	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 4 - CSP-I_5_4	Environmental	Open in IMG/M
3300025322	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_1 (SPAdes)	Environmental	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026051	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D1 (SPAdes)	Environmental	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300027163	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_40_50 (SPAdes)	Environmental	Open in IMG/M
3300027169	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_10_20 (SPAdes)	Environmental	Open in IMG/M
3300027209	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10 (SPAdes)	Environmental	Open in IMG/M
3300027324	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60 (SPAdes)	Environmental	Open in IMG/M
3300027647	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38 HiSeq	Environmental	Open in IMG/M
3300027650	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67 HiSeq	Environmental	Open in IMG/M
3300027682	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027961	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40 (SPAdes)	Environmental	Open in IMG/M
3300028587	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3	Environmental	Open in IMG/M
3300028589	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glucose_Day1	Environmental	Open in IMG/M
3300028707	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028721	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_355	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028744	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_367	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300030006	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67	Environmental	Open in IMG/M
3300030619	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)	Environmental	Open in IMG/M
3300031228	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT153D57	Environmental	Open in IMG/M
3300031229	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT155D38	Environmental	Open in IMG/M
3300031576	Biofilm microbial communities from Wishing Well Cave, Virginia, United States - WW16-25	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031852	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3	Host-Associated	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1119290622	3300000956	Soil	SAFFVLEQQTFLVLTWDTDRGREVGGAVRLELAAEDLQQEVDRLEAHGVGSGTITRTRFGTEVYDLTDPDGHLVRVGPAWTLHAIEGAV*
JGI10216J12902_1132529062	3300000956	Soil	ENAHSAFFILEQQTFLVLTWDPDRGREVGGAVRLELAADDLDAEVDRLNAHGIRNGTVTRTRFGTEVYDLADPDGHLVRVGPAWTLHAIEGAV*
C688J18823_110006292	3300001686	Soil	FLVLTWDPDRGREVGGAVRLELAADEIESEVERLEIYGIAGTVTRTRFGTEVYDLADPDGHLVRIGPAWTLHAIEGAV*
C687J26634_102881142	3300002123	Soil	RAVDFYSRLLGYGPQAAYDEGENAHSAFFVLEQRTHLVLTWDPDRGRETGGSXRLELASTELDREIGILRTRGIEGRKVRTRFGNDVYDVTDPDGHLVRLGPAWTLHAIEGAV*
Ga0055470_101002092	3300003992	Natural And Restored Wetlands	DFYTRLLGYGPQAAYDEGENAHSAFFVLEQRTYLVLTWDPDRGREIGGATRLELAAEDLEEEVATLESRGLSGGRLNRTRFGTEVYDLADPDGHLIRLGPPWTLHAIEGAV*
Ga0055468_101427522	3300003993	Natural And Restored Wetlands	YGPQAAYDEGENAHSAFFVLEQRTYLVLTWDPDRGREIGGATRLELAAEDLEEEVATLESRGLSGGRLNRTRFGTEVYDLADPDGHLIRLGPPWTLHAIEGAV*
Ga0055472_101515931	3300003998	Natural And Restored Wetlands	GPAAAYDEGENAHSAFFVLEGQTFLVLTWDPERGREIGGSVRLELAADDIHTEITRLDRRGILGGRVTKTRFGTEVYDLADPDGHLVRIGPAWTLHAIEGAV*
Ga0062593_1016347401	3300004114	Soil	AAAYDEGENAHSAFFVLEQQTFLVLTWDPDRGREVGGAVRLELAADEIESEVERLETHGIAGTVTRTRFGTEVYDLADPDGHLVRVGPAWTLHAIEGAV*
Ga0062593_1030015951	3300004114	Soil	PAAAYDEGENAHSAFFVLEQQTFLVLTWDPDRGREVGGAVRLELAADEIESEVERLDSHGISGVVTRTRFGTEVYDLADPDGHLVRIGPAWTLHAIEGAV*
Ga0062589_1009637382	3300004156	Soil	DEGENAHSAFFVLEQQTFLVLTWDPDRGREVGGAVRLELAADEIESEVERLETHGIGGRVTRTRFGTEVYDLADPDGHLVRIGPAWTLHAIEGAV*
Ga0062589_1022079862	3300004156	Soil	NAHSAFFVLEQRSYLVLTGDADRGRETGGSVRLELAAEDIPSEIEELRSRGISGGRVTRTRFGTDVYDLTDPDGHLIRLGPPWELHAIEGAV*
Ga0063356_1017517982	3300004463	Arabidopsis Thaliana Rhizosphere	IDFYTRLLGHPPQAAYDEGENAHSAFFVLEQRTYLVLTWDPDRGREIGGSTRLELAADDLEEEVAGLESRGISGGRLNRTRFGTEVYDLVDPDGHLIRLGPPWTLHAIEGAV*
Ga0062592_1020881601	3300004480	Soil	EGENAHSAFFVLEQQTFLVLTWDPDRGREVGGAVRLELAADEIESEVERLETHGIGGRVTRTRFGTEVYDLADPDGHLVRIGPAWTLHAIEGAV*
Ga0062591_1012037462	3300004643	Soil	YGPAAAYDEGENAHSAFFVLEQQTFLVLTWDPDRGREVGGAVRLELAADEIESEVERLDTHGIAGTVTRTRFGTEVYDLADPDGHLVRIGPAWTLHAIEGAV*
Ga0070691_108665692	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	PAAAYDEGENAHSAFFVLEQQTFLVLTWDPDRGREVGGAVRLELAADEIEGEVERLETHGIAGRVTRTRFGTEVYDLADPDGHLVRIGPAWTLHAIEGAV*
Ga0070687_1006432272	3300005343	Switchgrass Rhizosphere	FVLEQQTFLVLTWDPDRGREVGGAVRLELAADEIESEVERLDTHGIAGTVTRTRFGTEVYDLADPDGHLVRIGPAWTLHAIEGAV*
Ga0070692_106521012	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	LVLTWDPDRGREIGGSTRLELAADDLDRDVDGLRARGIEGGTRTQTRFGTEVYDLADPDGHLIRLGPAWTLHAIEGAV*
Ga0070688_1017126311	3300005365	Switchgrass Rhizosphere	QQTFLVLTWDPDRGREVGGAVRLELAADEIESEVERLDTHGIAGTVTRTRFGTEVYDLADPDGHLVRIGPAWTLHAIEGAV*
Ga0070705_1015089492	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	FYSRLLGYGPAAAYDEGENAHSAFFILEQQTFLVLTWDPDRGREVGGAVRLELAADEIESEVERLETHGIAGNVTRTRFGTEVFDLADPDGHLVRIGPAWTLHAIEGAV*
Ga0068867_1007921572	3300005459	Miscanthus Rhizosphere	LVLTWDPDRGREVGGAVRLELAADEIESEVERLETHGIAGMVTRTRFGTEVYDLADPDGHLVRVGPAWTLHAIEGAV*
Ga0070685_113505432	3300005466	Switchgrass Rhizosphere	GENAHSAFFVLEQQTFLVLTWDPDRGREVGGAVRLELAADEIESEVERLDTHGIAGTVTRTRFGTEVYDLADPDGHLVRIGPAWTLHAIEGAV*
Ga0070686_1006322402	3300005544	Switchgrass Rhizosphere	AFFVLEQQTFLVLTWDPDRGREVGGAVRLELAADEIESEVERLETHGIAGMVTRTRFGTEVYDLADPDGHLVRVGPAWTLHAIEGAV*
Ga0066905_1022412181	3300005713	Tropical Forest Soil	RGPAAAYDEGENAHSAFFVLEGQTFLVLTWDPERGREIGGSARLELAADEIESEIDRLDRQGIQGGRVTRTRFGTEVYDLADPDGHLVRVGPAWTLHAIEGAV*
Ga0075292_10490632	3300005887	Rice Paddy Soil	GENAHSAFFILEQQTFLVLTWDPDRGREVGGAVRLELAADEIENEVERLETQGIAGMVTRTRFGTEVYDLADPDGHLVRIGPAWTLHAIEGAV*
Ga0074047_115058531	3300006576	Soil	DLDRAVDWYTRLLGYGPQAAYDEGANAHSAFFVLEQRTYLVLTWDPDRGREIGGSVRLELAADDLVREIEELRTRGIAGKQVRTRFGKDVYDIADPDGHLVRLGPAWTLHAIEGAV*
Ga0075428_1012386751	3300006844	Populus Rhizosphere	AAYDEGENAHSAFFVLEGQTFLVLTWDPERGREIGGSVRLELAGDDIQAEIDRLDRQGIRGGRVTKTRFGTEVYDLADPDGHLVRIGPAWTLHAIEGAV*
Ga0075431_1014581291	3300006847	Populus Rhizosphere	YGPQAAYDEGENAHSAFFVLEQRTYLVLTWDPDRGREAGGSVRLELAADDIDEEMESLRARGIAGQRTRTRFGNDVYDVADPDGHLVRLGPAWTLHAIEGAV*
Ga0075420_1007741931	3300006853	Populus Rhizosphere	FLVLTWDPERGREIGGSSRLELAAEDIQVEIDRLERQGIEGGRITQTRFGTEVYDLADPDGHLVRIGPAWTLHAIEGAV*
Ga0075419_102177341	3300006969	Populus Rhizosphere	RGPAAVYDEGENAHSAFFVLEGQTFLVLTWDPERGREIGGSSRLELAAEDIQVEIDRLERQGIEGGRITQTRFGTEVYDLADPDGHLVRIGPAWTLHAIEGAV*
Ga0075418_113329852	3300009100	Populus Rhizosphere	DFYTRLLGYGPQAAYDEGENAHSAFFVLEQHSYLVLTGDEDRGRETGGSVRLELAAEDLQKEIEELQNRGISGGRVTRTRFGTDVYDLTDPDGHLIRLGPAWELHAIEGAV*
Ga0105088_10744752	3300009810	Groundwater Sand	AFFVLEQQTFLVLTWDTDRGREVGGAVRLELAAEDLQREVDRLEAHGVGSGTITRTRFGTEVYDLTDPDGHLVRVGPAWTLHAIEGAV*
Ga0105070_11279092	3300009815	Groundwater Sand	YTRLLGHGPAAAYDEGENAHSAFFVLEGQTFLVLTWDPERGREIGGSARLELAGDDIQAEIARLDRQGIQGGRVTKTRFGTEVYDLADPDGHLVRIGPAWTLHAIEGAV*
Ga0126304_101163041	3300010037	Serpentine Soil	NAHSAFFVLEQRTYLVLTWDPDRGREAGGSARLELAADDLEREVERLRKRGVDGGAIVRTRFGTDVYDLADPDGHLIRIGPAWTLHAIEGAV*
Ga0126314_111786052	3300010042	Serpentine Soil	TFLVLTWDTDRGREVGGAVRLELAAEDLPQAVDRLEAHGVGSGAITRTRFGTEVYDLTDPDGHLVRVGPAWTLHAIEGAV*
Ga0126306_113101041	3300010166	Serpentine Soil	AYDEGENAHSAFFVLEEGGAFLVLTWDPERGRQVGGGSRLELAVDDVESEVDRLRARGIDEGRQTRTRFGTDVFDVSDPDGYLVRVGPAWTLHAIEGAV*
Ga0136847_135162202	3300010391	Freshwater Sediment	AFFVLEQRTHLVLTWDPDRGREAGGSARLELAAVDLDREIGILRARGIEGRRTRTRFGNDVYDTTDPDGHLIRLGPAWTLHALEGAV*
Ga0134126_126291402	3300010396	Terrestrial Soil	NAHSAFFVLEQQTFLVLTWDPDRGREVGGAVRLELAADEIEGEVERLGTHGITGMVTRTRFGTEVYDLADPDGHLVRIGPAWTLHAIEGAV*
Ga0134122_107493191	3300010400	Terrestrial Soil	AAAYDEGENAHSAFFVLEQQTFLVLTWDPDRGREVGGAVRLELAAEDLEQEVERLEAHGVGSGTITRTRFGTEVYDLTDPDGHLVRVGPAWTLHAIEGAV*
Ga0134123_113728602	3300010403	Terrestrial Soil	FFVLEQQTFLVLTWDPDRGREVGGAVRLELAADEIESEGERLETHGIAGMVTRTRFGTEVYDLADPDGHLVRVGPAWTLHAIEGAV*
Ga0137716_102618141	3300010938	Hot Spring Fe-Si Sediment	VLEQHTYLVLTWDPDRGRETGGSVRLELAAENLDEEIEALRSRGIAGGRITRTRFGTDVYDLEDPDGHLIRLGPAWTLHAIEGAV*
Ga0136632_1000125610	3300012093	Polar Desert Sand	LLGKGPQAAYDEGENAQSAFFVLEERTYLVLTCDPDRGREVGGSVRLELAAEYLDAEIEALRARGVEGVLTGTRFGTEVYDLADPDGHLIRLGPAWTLHAIEGAV*
Ga0137368_103418611	3300012358	Vadose Zone Soil	DLDRSVDFYSRLLGYGPAAAYDEGENSHSAFFVLEQQTFLVLTRDTDLVRELGGAVRLEPAAEELQQGVDLLAANGVGSGTITRTRFGTEVYDLTDPDGHLVRVGPAWTLHAIEGAV*
Ga0157305_100738732	3300012891	Soil	LEQQTFLVLTWDPDRGREVGGAVRLELAADEIEGEVERLETHGIAGRVTRTRFGTEVYDLADPDGHLVRIGPAWTLHAIEGAV*
Ga0157309_102164901	3300012895	Soil	AYDEGENAHSAFFVLEQQTFLVLTWDPDRGREVGGAVRLELAADEIESEVERLDSHGISGVVTRTRFGTEVYDLADPDGHLVRIGPAWTLHAIEGAV*
Ga0157288_103792862	3300012901	Soil	IDFYSRLLGYGPQAAYDEGENAHSAFFVLEERTYLVLTWDPDRGREIGGSTRLELAADDLDRDVDGLRARGIEGGTRTQTRFGTEVYDLADPDGHLIRLGPAWTLHAIEGAV*
Ga0157291_101030221	3300012902	Soil	SAFFVLEQQTFLVLTWDPDRGREVGGAVRLELAADEIESEVERLDSHGISGVVTRTRFGTEVYDLADPDGHLVRIGPAWTLHAIEGAV*
Ga0157282_104122801	3300012904	Soil	QTFLVLTWDPDRGREVGGAVRLELAADEIEGEVERLETHGIAGRVTRTRFGTEVYDLADPDGHLVRIGPAWTLHAIEGAV*
Ga0157308_103959641	3300012910	Soil	AAYDEGENAHSAFFVLEQQTFLVLTWDPDRGREVGGAVRLELAADEIESEVERLDSHGISGVVTRTRFGTEVYDLADPDGHLVRIGPAWTLHAIEGAV*
Ga0163162_109298971	3300013306	Switchgrass Rhizosphere	YGPAAAYDEGENAHSAFFVLEQQTFLVLTWDPDRGREVGGAVRLELAADEIESEVERLDTHGIAGLVTRTRFGTEVYDLADPDGHLVRIGPAWTLHAIEGAV*
Ga0157372_124752212	3300013307	Corn Rhizosphere	DEGENAHSAFFILEQQTFLVLTWDPDRGREAGGAVRLELAGDEIESEVERLETHGIAGNVTRTRFGTEVFDLADPDGHLVRIGPAWTLHAIEGAV*
Ga0075313_11537611	3300014267	Natural And Restored Wetlands	AYDEGENAHSAFFVLEQRTYLVLTWDPDRGREIGGAARLELAAEDLAEEVARLEARGLTGRLTNTRFGTEVYDLADPDGHLIRLGPPWTLHAIEGAV*
Ga0075325_10405372	3300014270	Natural And Restored Wetlands	YLVLTWDPDRGREIGGATRLELAAEDLEEEVATLESRGLSGGRLNRTRFGTEVYDLADPDGHLIRLGPPWTLHAIEGAV*
Ga0075310_10251301	3300014302	Natural And Restored Wetlands	DRAIDFYTRLLGHGPQAAYDEGENAHSAFFVLEERTYLVLTWDPDRGREVGGSARLELAADDLEGELAGLRARGLEGRITQTRFGNEVLDVADPDGHLIRFGPAWTLHAIEGAV*
Ga0075310_10913542	3300014302	Natural And Restored Wetlands	VLTWDPDRGREIGGATRLELAAEDLEEEVATLESRGLSGGRLNRTRFGTEVYDLADPDGHLIRLGPPWTLHAIEGAV*
Ga0157380_122836792	3300014326	Switchgrass Rhizosphere	LEQQTFLVLTWDPDRGREVGGAVRLELAADEIESEVERLETHGIAGNVTRTRFGTEVFDLADPDGHLVRIGPAWTLHAIEGAV*
Ga0157376_101568633	3300014969	Miscanthus Rhizosphere	AHSAFFVLEQQTFFVLTWDPDRGREVGGAVRLELAADEIESEVERLDTHGIAGTVTRTRFGTEVYDLADPDGHLVRIGPAWTLHAIEGAV*
Ga0184610_12433092	3300017997	Groundwater Sediment	VDFYSRLLGYGPQAAYDEGENAHSAFFVLEQRTYLVLTWDPDRGKEVGGSVRLELAAEDLDREIWSLRARGIEGKQVQTRFGNDVYDVTDPDGHLVRLGPAWTLHAIEGAV
Ga0184620_103305241	3300018051	Groundwater Sediment	QTFLVLTWDTDRGREVGGAVRLELAAEDLQREVDRLEAHGVGSGRITRTRFGTEVYDLTDPDGHLVRVGPPWTLHAIEGAV
Ga0184638_12135271	3300018052	Groundwater Sediment	GPQAAYDEGENAHSAFFVLEQRTYLVLTWDPDRGREAGGSARLELAADDLEQEVERLRKRGVDGGAIVRTRFGTDVYDLADPDGHLIRIGPAWTLHAIEGAV
Ga0184621_101874012	3300018054	Groundwater Sediment	IDFYSRLLGYGPAAAYDEGENAHSAFFVLQQQTFLVLTWDPDRGREVGGAVRLELAAAEIEGEVERLETHGIVGMVTRTRFGTEVFDLADPDGHLVRIGPAWTLHAIEGAV
Ga0190265_103682481	3300018422	Soil	GPAAAYDEGENAHSAFFVLEGQTFLVLTWDPERGREIGGSSRLELAAEDIQTEIDRLERQGIEGGRITQTRFGTEVYDLADPDGHLVRIGPAWTLHAIEGAV
Ga0190265_116789902	3300018422	Soil	YDEGENAHSAFFILEGQTFLVLTWDPERGREIGGSSRLELAAEDIQSEIDRLDRQGIEGGRITQTRFGTEVYDLADPDGHLVRIGPAWTLHAIEGAV
Ga0190271_117865322	3300018481	Soil	RLLGRGPAAAYDEGENAHSAFFILEGQTFLVLTWDPERGREIGGSSRLELAAEDIQSEIDRLDRQGIEGGRITQTRFGTEVYDLADPDGHLVRIGPAWTLHAIEGAV
Ga0190264_119554101	3300019377	Soil	GRGPAAAYDEGENAHSAFFVLEGQTFLVLTWDPERGREIGGSTRLELAGEDITSEVDRLERQGIEGGRVTRTRFGTEVYDLADPDGHLVRIGPAWTLHAIEGAV
Ga0193741_11184952	3300019884	Soil	RLLGRGPAAAYDEGENAHSAFFVLEGQTFLVLTWDPERGREIGGSSRLELAAEEIQIEIDRLERQGIEGGRITQTRFGTEVYDLADPDGHLVRIGPAWTLHAIEGAV
Ga0210381_100235623	3300021078	Groundwater Sediment	SAFFVLQQQTFLVLTWDPDRGREVGGAVRLELAADEIEGEVERLETHGIAGRVTRTRFGTEVYDLADPDGHLVRIGPAWTLHAIEGAV
Ga0210381_101711841	3300021078	Groundwater Sediment	IDFYSRLLGYGPAAAYDEGENAHSAFFVLQQQTFLVLTWDPDRGREVGGAVRLELAADEIEGEVARLETHGIVGMVTRTRFGTEVFDLADPDGHLVRIGPAWTLHAIEGAV
Ga0210382_102689331	3300021080	Groundwater Sediment	LLGYGPQAAYDEGENAHSAFFVLEQRTYLVLTWDPDRGREAGGSTRLELAADDLEQEVERLRKRGVDGGAIVRTRFGTDVYDLADPDGHLIRIGPAWTLHAIEGAV
Ga0182009_104449052	3300021445	Soil	ENAHSAFFVLEQQTFLVLTWDLDRGREVGGAVRLELAADEIGTEIERLDTHGINGTVTRTRFGTEVYDLADPDGHLVRIGPAWTLHAIEGAV
Ga0247790_100747652	3300022915	Soil	QTFLVLTWDPDRGREVGGAVRLELAADEIEGEVERLETHGIAGRVTRTRFGTEVYDLADPDGHLVRIGPAWTLHAIEGAV
Ga0247801_10069553	3300023064	Soil	YDEGENAHSAFFVLEQQTFLVLTWDPDRGREVGGAVRLELAADEIESEVERLETHGIAGMVTRTRFGTEVYDLADPDGHLVRVGPAWTLHAIEGAV
Ga0209321_105205371	3300025312	Soil	VDFYSRLLGYGPQAAYDEGENAHSAFFVLEQRTHLVLTWDPDRGRETGGSTRLELASTELDREIGILRTRGIEGRKVRTRFGNDVYDVTDPDGHLVRLGPAWTLHAIEGAV
Ga0209641_108772341	3300025322	Soil	AYLVLTWDPDRGRELGGSVRLELAAEDLEREIEELRVRGITGGRVTRTRFGTNVYDLTDPDGHLIRLGPAWELHAIEGAV
Ga0207691_117010341	3300025940	Miscanthus Rhizosphere	DFYSRLLGYGPAAAYDEGENAHSAFFVLEQQTFLVLTWDPDRGREVGGAVRLELAADEIESEVERLETHGIAGIVTRTRFGTEVYDLADPDGHLVRIGPAWTLHAIEGAV
Ga0207651_110915921	3300025960	Switchgrass Rhizosphere	EGENAHSAFFVLEQQTFLVLTWDPDRGREVGGAVRLELAADEIESEVERLETHGIAGIVTRTRFGTEVYDLADPDGHLVRIGPAWTLHAIEGAV
Ga0207668_101016073	3300025972	Switchgrass Rhizosphere	YSRLLGYGPAAAYDEGENAHSAFFILEQQTFLVLTWDPDRGREVGGAVRLELAADEIESEVERLETHGIAGNVTRTRFGTEVFDLADPDGHLVRIGPAWTLHAIEGAV
Ga0207668_116867101	3300025972	Switchgrass Rhizosphere	GENAHSAFFVLEQQTFLVLTWDPDRGREVGGAVRLELAADEIESEVERLETHGIAGMVTRTRFGTEVYDLADPDGHLVRVGPAWTLHAIEGAV
Ga0208911_10097211	3300026051	Natural And Restored Wetlands	YLVLTWDPDRGREIGGATRLELAAEDLEEEVATLESRGLSGGRLNRTRFGTEVYDLADPDGHLIRLGPPWTLHAIEGAV
Ga0207708_111658782	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	VLTWDPDRGREVGGAVRLELAADEIESEVERLETHGIAGMVTRTRFGTEVYDLADPDGHLVRVGPAWTLHAIEGAV
Ga0209878_10540341	3300027163	Groundwater Sand	AAAYDEGENAHSAFFVLEQQTFLVLTWDTDRGREVGGAVRLELAAEDLQREVDRLEAHGVGSGTITRTRFGTEVYDLTDPDGHLVRVGPAWTLHAIEGAV
Ga0209897_10501962	3300027169	Groundwater Sand	HSAFFVLEGQTFLVLTWDPERGREIGGSARLELAGDDIQAEITRLDRQGIQGGRVTKTRFGTEVYDLADPDGHLVRIGPPWTLHAIEGAV
Ga0209875_10307582	3300027209	Groundwater Sand	GENAHSAFFVLEQQTFLVLTWDTDRGREVGGAVRLELAAEDLQREVDRLEAHGVGSGTITRTRFGTEVYDLTDPDGHLVRVGPAWTLHAIEGAV
Ga0209845_10186231	3300027324	Groundwater Sand	AAYDEGENAHSAFFVLEGQTFLVLTWDPERGREIGGSARLELAGEDIQAEITKLERQGIQGGRVTRTRFGTEVYDLADPDGHLVRIGPAWTLHAIEGAV
Ga0214468_10294101	3300027647	Soil	VLEGQTFLVLTWDPERGREIGGSSRLELAAEDITSEVDRLERQGIEGGRVTRTRFGTEVYDLADPDGHLVRIGPAWTLHAIEGAV
Ga0256866_10236641	3300027650	Soil	FFVLEEQTFLVLTWDTERGRQVGGAVRLELAADDLDRQIERLERQGVEGGSVTRTRFGTEVYDLADPDGHLVRIGPAWTIHAIEGAV
Ga0209971_11045792	3300027682	Arabidopsis Thaliana Rhizosphere	LGYGPAAAYDEGENAHSAFFVLEQQTFLVLTWDPDRGREVGGAVRLELAADEIESEVERLETHGIAGMVTRTRFGTEVYDLADPDGHLVRVGPAWTLHAIEGAV
Ga0209853_11209922	3300027961	Groundwater Sand	RSNDWYTRLLGRGPAAAYDEGENAHSAFFVLEGQTFLVLTWDPERGREIGGSARLELAAEDIGSEIERLERQGIAGGRVTRTRFGTEVYDLADPDGHLVRIGPPWTLHAIEGAV
Ga0247828_108468391	3300028587	Soil	AAYDEGENAHSAFFVLEQQTFLVLTWDPDRGREVGGAVRLELAADEIESEVERLETHGIAGMVTRTRFGTEVYDLADPDGHLVRVGPAWTLHAIEGAV
Ga0247818_102878931	3300028589	Soil	LTWDPDRGREVGGAVRLELAADEIESEVERLETHGIAGMVTRTRFGTEVYDLADPDGHLVRVGPAWTLHAIEGAV
Ga0307291_11102071	3300028707	Soil	VLQQQTFLVLTWDPDRGREVGGAVRLELAADEIEGEVARLETHGIVGMVTRTRFGTEVFDLADPDGHLVRIGPAWTLHAIEGAV
Ga0307313_101285051	3300028715	Soil	PQAAYDEGENAHSAFFVLEQRTYLVLTWDPDRGREAGGSTRLELAADDLEQEVERLRKRGVDGGAIVRTRFGTDVYDLADPDGHLIRIGPAWTLHAIEGAV
Ga0307301_101705382	3300028719	Soil	DEGENAHSAFFVLEQQTFLVLTWDTERGREVGGAVRLELAAEDLQREVDRLEAHGVGSGTITRTRFGTEVYDLTDPDGHLVRVGPAWTLHAIEGAV
Ga0307315_100842322	3300028721	Soil	VLEQQTFLVLTWDPDRGREVGGAVRLELAADEIESEVERLETYGISGRVTRTRFGTEVYDLADPDGHLVRIGPAWTLHAIEGAV
Ga0307319_100822471	3300028722	Soil	HSAFFVLEQQTFLVLTWDTERGREVGGAVRLELAAEDLQREVDRLEARGVGSGTITRTRFGTEVYDLTDPDGHLVRVGPAWTLHAIEGAV
Ga0307318_101227221	3300028744	Soil	LEQRTYLVLTWDPDRGREAGGSTRLELAADDLEQEVERLRKRGVDGGAIVRTRFGTDVYDLADPDGHLIRIGPAWTLHAIEGAV
Ga0307318_102151802	3300028744	Soil	LVLTWDTERGREVGGAVRLELAAEDLQREVDRLEARGVGTGTITRTRFGTEVYDLTDPDGHLVRVGPAWTLHAIEGAV
Ga0307316_100254413	3300028755	Soil	TDFYSRLLGYGPAAAYDEGDNAHSAFFVLEQQTFLVLTWDTDRGREVGGAVRLELAADEIESEVERLETHGITGMVTRTRFGTEVYDLADPDGHLVRIGPAWTLHAIEGAV
Ga0307280_103394191	3300028768	Soil	EQQTFLVLTWDPDRGREVGGAVRLELAADDLEQEVERLDAHGIGSGTITRTRFGTEVYDLADPDGHLVRVGPAWTLHAIEGAV
Ga0307320_102049762	3300028771	Soil	RLLGYGPAAAYDEGENAHSAFFVLQQQTFLVLTWDPDRGREVGGAVRLELAADEIEGEVARLETHGIVGMVTRTRFGTEVFDLADPDGHLVRIGPAWTLHAIEGAV
Ga0307320_104667031	3300028771	Soil	FYSRLLGYGPAAAYDEGENAHSAFFVLEQQTFLVLTWDPDRGREVGGAVRLELAAEDLEEEVGRLEAQGIDSGAITRTRFGTEVYDLADPDGHLVRVGPAWTLHAIEGAV
Ga0307287_103485882	3300028796	Soil	GRAAAYDEGENAHSAFFVLEQQTFLVLTWDTDRGREVGGAVRLELAAEDLQREVDRLEAHGVGSGTITRTRFGTEVYDLTDPDGHLVRVGPAWTLHAIEGAV
Ga0307292_104494291	3300028811	Soil	LGYGPAAAYDEGENAHSAFFVLEQQTFLVLTWDTDRGREVGGAVRLELAAEDLQQEVDRLEAHGVGSGRITRTRFGTEVYDLTDPDGHLVRVGPAWTLHAIEGAV
Ga0307292_105145882	3300028811	Soil	VLTWDPDRGREIGGSTRLELAAEDLDSDVEKLRVRGIEGGTRTQTRFGTEVYDLADPDGHLVRLGPAWTLHAIEGAV
Ga0307286_100998263	3300028876	Soil	TWDPDRGREVGGAVRLELAAEDLEQEVDRLETHGIGSGKITRTRFGTEVYDLTDPDGHLVRVGPAWTVHAIEGAV
Ga0307278_100592023	3300028878	Soil	WDPDRGREVGGAVRLELAAEDLEQEVERLEAHGVGSGTITRTRFGTEVYDLTDPDGHLVRVGPPWTLHAIEGAV
Ga0307300_103468862	3300028880	Soil	QQTFLVLTWDTERGREVGGAVRLELAAEDLQREVDRLEAHGVGSGTITRTRFGTEVYDLTDPDGHLVRVGPAWTLHAIEGAV
Ga0307277_103485161	3300028881	Soil	RLLGYGPAAAYDEGENAHSAFFVLQQQTFLVLTWDPDRGREVGGAVRLELAADEIESEVERLEIYGIAGTVTRTRFGTEVYDLADPDGHLVRIGPAWTLHAIEGAV
Ga0307277_105164162	3300028881	Soil	ENAHSAFFVLEQQTFLVLTWDPDRGREVGGAVRLELAAEDLEEEVGRLEAQGIDSGAITRTRFGTEVYDLADPDGHLVRVGPAWTLHAIEGAV
Ga0247827_103995383	3300028889	Soil	YDEGENAHSAFFVLEGQTFLVLTWDPERGREIGGSARLELAGDDIPAEMTRLDRQGISGGRVTRTRFGTEVYDLADPDGHLVRIGPAWTVHAIEGAV
Ga0299907_108026681	3300030006	Soil	SIDWYTRLLGRGPAAAYDEGENAHSAFFVLEGQTFLVLTWDPERGREIGGSTRLELAAEDITSEVDRLERQGIEGGRVTRTRFGTEVFDLADPDGHLVRIGPAWTLHAIEGAV
Ga0268386_101657164	3300030619	Soil	LVLTWDPERGREIGGSSRLELAAEDITSEVDRLERQGIEGGRVTRTRFGTEVYDLADPDGHLVRIGPAWTLHAIEGAV
Ga0299914_102287104	3300031228	Soil	GPQAAYDEGENAHSAFFILEERTYLVLTWDPDRGREVGGSTRLELAADDLQGELAGLQARGLEGRITQTRFGNEVLDVADPDGHLIRFGPAWTLHAIEGAV
Ga0299914_104948981	3300031228	Soil	SAFFVLEGQTFLVLTWDPERGREIGGSVRLELAADDIHGEITRLDRRGILGGRVTRTRFGTEVYDLADPDGHLVRIGPAWTLHAIEGAV
Ga0299914_106088452	3300031228	Soil	DPDRGREVGGAARLELAADDLQGELAGLQARGLEGRITKTRFGNDVLDVADPDGHLIRFGPAWTLHAIEGAV
Ga0299914_106317151	3300031228	Soil	LDRAIDFYTRLLGYGPQAAYDEGENAHSAFFVLEERTYLVLTWDPDRGREVGGAARLELAADDLQGELAGLQTRGLEGRITKTRFGNDVLDVADPDGHLIRFGPAWTLHAIEGAV
Ga0299914_113290251	3300031228	Soil	FLVLTWDPERGREIGGSSRLELAGDDIQAEITRLERRGIQGGRVTRTRFGTEVYDLADPDGHLVRIGPAWTLHAIEGAV
Ga0299913_120292581	3300031229	Soil	TYLVLTWDPDRGREVGGAARLELAADDLQGELAGLAARGLEGRVTQTRFGNEVVDVIDPDGHLIRFGPAWTLHAIEGAV
Ga0247727_110932291	3300031576	Biofilm	SAFFVLEQRTHLVLTWDPDRGRETGGSTRLELAAVDLDREIGVLRARGIQGRKVRTRFGKDVYDVTDPDGHLVRLGPAWTLHAIEGAV
Ga0310907_106496361	3300031847	Soil	GPAAAYDEGENAHSAFFVLEQQTFLVLTWDPDRGREVGGAVRLELAADEIEGEVERLETHGIAGRVTRTRFGTEVYDLADPDGHLVRIGPAWTLHAIEGAV
Ga0307410_111454082	3300031852	Rhizosphere	VLTWDPDRGREVGGAVRLELAADEIESEVERLETYGIAGMVTRTRFGTEVYDLADPDGHLVRIGPAWTLHAIEGAV
Ga0310900_104594412	3300031908	Soil	AAAYDEGENAHSAFFVLEQQTFLVLTWDPDRGREVGGAVRLELAADEIEGEVERLETHGIAGMVTRTRFGTEVYDLADPDGHLVRVGPAWTLHAIEGAV
Ga0310901_103556501	3300031940	Soil	SAFFVLEQQTFLVLTWDPDRGREVGGAVRLELAADEIEGEVERLETHGIAGRVTRTRFGTEVYDLADPDGHLVRIGPAWTLHAIEGAV
Ga0214473_115825261	3300031949	Soil	AHSAFFVLEQRTYLVLTWDPDRGKEVGGSVRLELAAEDLDREIWSLRARGIEGRQVRTRFGNDVYDVTDPDGHLVRLGPAWTLHAIEGAV
Ga0310906_106658891	3300032013	Soil	DWYTRLLGRGPAAAYDEGENAHSAFFVLEGQTFLVLTWDPERGREIGGSARLELAGDDIPAEMTRLDRQGISGGRVTRTRFGTEVYDLADPDGHLVRIGPAWTVHAIEGAV

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F068798

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences