NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F068741

Metagenome / Metatranscriptome Family F068741

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F068741
Family Type Metagenome / Metatranscriptome
Number of Sequences 124
Average Sequence Length 70 residues
Representative Sequence MTTLSEMIDEVLINLSGYTYQQDRSTYLTTAVTTLTSPSSSPTILSLGSTDSVGKGVLEVGEELMWVD
Number of Associated Samples 96
Number of Associated Scaffolds 124

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Viruses
% of genes with valid RBS motifs 90.16 %
% of genes near scaffold ends (potentially truncated) 96.77 %
% of genes from short scaffolds (< 2000 bps) 84.68 %
Associated GOLD sequencing projects 93
AlphaFold2 3D model prediction Yes
3D model pTM-score0.30

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Duplodnaviria (56.452 % of family members)
NCBI Taxonomy ID 2731341
Taxonomy All Organisms → Viruses → Duplodnaviria

Most Common Ecosystem
GOLD Ecosystem Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater
(16.129 % of family members)
Environment Ontology (ENVO) Unclassified
(34.677 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Water (non-saline)
(49.194 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 22.92%    β-sheet: 2.08%    Coil/Unstructured: 75.00%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.30
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 124 Family Scaffolds
PF13641Glyco_tranf_2_3 2.42
PF13506Glyco_transf_21 0.81
PF00535Glycos_transf_2 0.81



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms88.71 %
UnclassifiedrootN/A11.29 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000756|JGI12421J11937_10178935All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes506Open in IMG/M
3300001605|Draft_10077068All Organisms → Viruses → Predicted Viral2569Open in IMG/M
3300001850|RCM37_1185356All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage545Open in IMG/M
3300003277|JGI25908J49247_10108129All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage665Open in IMG/M
3300004240|Ga0007787_10305469All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes787Open in IMG/M
3300004481|Ga0069718_14243025All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage772Open in IMG/M
3300005525|Ga0068877_10703967All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes540Open in IMG/M
3300005527|Ga0068876_10465019Not Available698Open in IMG/M
3300005581|Ga0049081_10100343All Organisms → Viruses → Predicted Viral1079Open in IMG/M
3300005581|Ga0049081_10281699All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage576Open in IMG/M
3300005992|Ga0073924_1024948All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes841Open in IMG/M
3300006641|Ga0075471_10574980All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes554Open in IMG/M
3300006805|Ga0075464_10417342All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes817Open in IMG/M
3300007516|Ga0105050_10819652Not Available530Open in IMG/M
3300007544|Ga0102861_1045239All Organisms → Viruses → Predicted Viral1138Open in IMG/M
3300007639|Ga0102865_1122089All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → unclassified Caudoviricetes → Roseobacter phage CRP-9779Open in IMG/M
3300007670|Ga0102862_1079795All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage810Open in IMG/M
3300008055|Ga0108970_11163359All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage685Open in IMG/M
3300008107|Ga0114340_1026355All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes4307Open in IMG/M
3300008107|Ga0114340_1193473All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage693Open in IMG/M
3300008107|Ga0114340_1253539All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage536Open in IMG/M
3300008110|Ga0114343_1074088All Organisms → Viruses → Predicted Viral1241Open in IMG/M
3300008110|Ga0114343_1075657All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Podoviridae1223Open in IMG/M
3300008113|Ga0114346_1144536All Organisms → Viruses → Predicted Viral1025Open in IMG/M
3300008113|Ga0114346_1280128All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage592Open in IMG/M
3300008116|Ga0114350_1021420All Organisms → Viruses → Predicted Viral2680Open in IMG/M
3300008116|Ga0114350_1026187All Organisms → Viruses → Predicted Viral2354Open in IMG/M
3300008117|Ga0114351_1148854Not Available1292Open in IMG/M
3300008119|Ga0114354_1176112All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage769Open in IMG/M
3300008120|Ga0114355_1187633All Organisms → Viruses → Predicted Viral1076Open in IMG/M
3300008122|Ga0114359_1100274All Organisms → Viruses → Predicted Viral1026Open in IMG/M
3300008258|Ga0114840_1001832Not Available4661Open in IMG/M
3300008258|Ga0114840_1066105All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes555Open in IMG/M
3300008266|Ga0114363_1131184Not Available856Open in IMG/M
3300008266|Ga0114363_1228985All Organisms → Viruses → Predicted Viral1234Open in IMG/M
3300008450|Ga0114880_1174512All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage748Open in IMG/M
3300008450|Ga0114880_1277570Not Available503Open in IMG/M
3300009081|Ga0105098_10687072All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage542Open in IMG/M
3300009159|Ga0114978_10847172All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage513Open in IMG/M
3300009165|Ga0105102_10494638All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes663Open in IMG/M
3300009165|Ga0105102_10576978All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage619Open in IMG/M
3300009563|Ga0130030_1020618All Organisms → Viruses → Predicted Viral1013Open in IMG/M
3300010354|Ga0129333_11009656All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes699Open in IMG/M
3300010354|Ga0129333_11700769All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage513Open in IMG/M
3300010370|Ga0129336_10315856All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage866Open in IMG/M
3300010370|Ga0129336_10535126All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage629Open in IMG/M
3300010370|Ga0129336_10640167All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage565Open in IMG/M
3300010885|Ga0133913_11276877All Organisms → Viruses → Predicted Viral1877Open in IMG/M
3300011381|Ga0102688_1552361Not Available662Open in IMG/M
3300012516|Ga0129325_1195084All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage629Open in IMG/M
3300012968|Ga0129337_1186002All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage516Open in IMG/M
3300013004|Ga0164293_10417451Not Available900Open in IMG/M
(restricted) 3300013131|Ga0172373_10402887All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage852Open in IMG/M
(restricted) 3300013132|Ga0172372_10874389All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage551Open in IMG/M
3300013372|Ga0177922_10314702Not Available923Open in IMG/M
3300017723|Ga0181362_1064691All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage747Open in IMG/M
3300017774|Ga0181358_1133762All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes861Open in IMG/M
3300019122|Ga0188839_1018203All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage745Open in IMG/M
3300020048|Ga0207193_1186101All Organisms → Viruses → Predicted Viral1667Open in IMG/M
3300020157|Ga0194049_1121840All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage701Open in IMG/M
3300020172|Ga0211729_10140195Not Available857Open in IMG/M
3300021963|Ga0222712_10080147All Organisms → Viruses → Predicted Viral2335Open in IMG/M
3300022200|Ga0196901_1261656All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage533Open in IMG/M
3300022407|Ga0181351_1163984All Organisms → Viruses784Open in IMG/M
3300022752|Ga0214917_10094058All Organisms → Viruses → Predicted Viral1773Open in IMG/M
3300022752|Ga0214917_10161804All Organisms → Viruses → Predicted Viral1164Open in IMG/M
3300024348|Ga0244776_10106838All Organisms → Viruses → Predicted Viral2086Open in IMG/M
3300024350|Ga0255167_1079412All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage540Open in IMG/M
3300024481|Ga0256330_1039484All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1012Open in IMG/M
3300024505|Ga0255150_1009199All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage1732Open in IMG/M
3300024568|Ga0255238_1008979All Organisms → Viruses → Predicted Viral2386Open in IMG/M
3300024568|Ga0255238_1160019All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage530Open in IMG/M
3300025635|Ga0208147_1040944All Organisms → Viruses → Predicted Viral1201Open in IMG/M
3300027123|Ga0255090_1004024All Organisms → Viruses → Predicted Viral3342Open in IMG/M
3300027152|Ga0255100_1007609All Organisms → Viruses → Predicted Viral2907Open in IMG/M
3300027393|Ga0209867_1056512All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage591Open in IMG/M
3300027486|Ga0255086_1005168All Organisms → Viruses → Predicted Viral2910Open in IMG/M
3300027538|Ga0255085_1016507All Organisms → Viruses → Predicted Viral1761Open in IMG/M
3300027659|Ga0208975_1053267All Organisms → Viruses → Predicted Viral1238Open in IMG/M
3300027721|Ga0209492_1213140All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage661Open in IMG/M
3300027777|Ga0209829_10039756All Organisms → Viruses → Predicted Viral2567Open in IMG/M
3300027793|Ga0209972_10360152All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage626Open in IMG/M
3300027797|Ga0209107_10095297All Organisms → Viruses → Predicted Viral1603Open in IMG/M
3300027797|Ga0209107_10471258All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage562Open in IMG/M
3300027798|Ga0209353_10180669All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage931Open in IMG/M
(restricted) 3300027970|Ga0247837_1377728All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage506Open in IMG/M
3300028394|Ga0304730_1040777All Organisms → Viruses → Predicted Viral2325Open in IMG/M
3300029930|Ga0119944_1028155All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes734Open in IMG/M
3300029930|Ga0119944_1043589All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes550Open in IMG/M
3300029933|Ga0119945_1038748All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage523Open in IMG/M
3300031758|Ga0315907_10162577All Organisms → Viruses → Predicted Viral1887Open in IMG/M
3300031758|Ga0315907_10442003All Organisms → Viruses → Predicted Viral1040Open in IMG/M
3300031758|Ga0315907_11238871All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage519Open in IMG/M
3300031857|Ga0315909_10199556All Organisms → Viruses → Predicted Viral1587Open in IMG/M
3300031857|Ga0315909_10202105All Organisms → Viruses → Predicted Viral1573Open in IMG/M
3300031857|Ga0315909_10262641All Organisms → Viruses → Predicted Viral1316Open in IMG/M
3300031857|Ga0315909_10270987All Organisms → Viruses → Predicted Viral1288Open in IMG/M
3300031951|Ga0315904_10133411Not Available2546Open in IMG/M
3300031951|Ga0315904_10172997All Organisms → Viruses → Predicted Viral2156Open in IMG/M
3300031951|Ga0315904_10396851All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales1252Open in IMG/M
3300031951|Ga0315904_10675241Not Available873Open in IMG/M
3300031951|Ga0315904_11326592All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage542Open in IMG/M
3300031963|Ga0315901_10412587All Organisms → Viruses → Predicted Viral1079Open in IMG/M
3300032050|Ga0315906_11341678All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes507Open in IMG/M
3300032116|Ga0315903_10296273All Organisms → Viruses1369Open in IMG/M
3300033418|Ga0316625_101266455All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage681Open in IMG/M
3300033557|Ga0316617_102355745All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage551Open in IMG/M
3300033979|Ga0334978_0230678All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage901Open in IMG/M
3300033981|Ga0334982_0080352All Organisms → Viruses → Predicted Viral1747Open in IMG/M
3300033981|Ga0334982_0083427All Organisms → Viruses → Predicted Viral1708Open in IMG/M
3300033993|Ga0334994_0415441All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage646Open in IMG/M
3300033993|Ga0334994_0582084All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage505Open in IMG/M
3300034062|Ga0334995_0719102All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage559Open in IMG/M
3300034071|Ga0335028_0544425All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage634Open in IMG/M
3300034073|Ga0310130_0014804All Organisms → Viruses → Predicted Viral2597Open in IMG/M
3300034101|Ga0335027_0679121All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage615Open in IMG/M
3300034107|Ga0335037_0007354All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage5852Open in IMG/M
3300034119|Ga0335054_0319393All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage907Open in IMG/M
3300034120|Ga0335056_0423364All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage713Open in IMG/M
3300034122|Ga0335060_0467631All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage655Open in IMG/M
3300034279|Ga0335052_0387933All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → environmental samples → uncultured Caudovirales phage747Open in IMG/M
3300034356|Ga0335048_0280842All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes874Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater16.13%
Freshwater, PlanktonEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton13.71%
FreshwaterEnvironmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater12.10%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake8.87%
FreshwaterEnvironmental → Aquatic → Freshwater → River → Unclassified → Freshwater7.26%
AqueousEnvironmental → Aquatic → Marine → Coastal → Unclassified → Aqueous5.65%
Freshwater To Marine Saline GradientEnvironmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient4.03%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment3.23%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake3.23%
EstuarineEnvironmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine3.23%
Freshwater LenticEnvironmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lentic2.42%
Freshwater And SedimentEnvironmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater And Sediment2.42%
AquaticEnvironmental → Aquatic → Freshwater → Drinking Water → Unclassified → Aquatic2.42%
Freshwater LakeEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake1.61%
FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater1.61%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.61%
SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sand1.61%
SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment0.81%
Anoxic Zone FreshwaterEnvironmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater0.81%
Freshwater Lake SedimentEnvironmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment0.81%
Marine PlanktonEnvironmental → Aquatic → Freshwater → Lotic → Unclassified → Marine Plankton0.81%
FreshwaterEnvironmental → Aquatic → Freshwater → Ice → Glacial Lake → Freshwater0.81%
Meromictic PondEnvironmental → Aquatic → Freshwater → Pond → Unclassified → Meromictic Pond0.81%
Estuary WaterEnvironmental → Aquatic → Marine → Coastal → Unclassified → Estuary Water0.81%
Estuarine WaterEnvironmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water0.81%
Fracking WaterEnvironmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water0.81%
EstuaryHost-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary0.81%
Hydrocarbon Resource EnvironmentsEngineered → Wastewater → Industrial Wastewater → Petrochemical → Unclassified → Hydrocarbon Resource Environments0.81%

Visualization
Powered by ApexCharts



Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000756Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011EnvironmentalOpen in IMG/M
3300001605Tailings pond microbial communities from Northern Alberta - Syncrude Mildred Lake Settling BasinEngineeredOpen in IMG/M
3300001850Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - RCM37, ROCA_DNA234_0.2um_Ob_C_2aEnvironmentalOpen in IMG/M
3300003277Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SDEnvironmentalOpen in IMG/M
3300004240Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SNEnvironmentalOpen in IMG/M
3300004481Combined Assembly of Gp0112041, Gp0112042, Gp0112043EnvironmentalOpen in IMG/M
3300005525Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel6S_1000h metaGEnvironmentalOpen in IMG/M
3300005527Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaGEnvironmentalOpen in IMG/M
3300005581Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRFEnvironmentalOpen in IMG/M
3300005992Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_14-Oct-14EnvironmentalOpen in IMG/M
3300006030Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_<0.8_DNAEnvironmentalOpen in IMG/M
3300006641Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNAEnvironmentalOpen in IMG/M
3300006805Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNAEnvironmentalOpen in IMG/M
3300007516Freshwater microbial communities from Lake Fryxell liftoff mats and glacier meltwater in Antarctica - FRY-01EnvironmentalOpen in IMG/M
3300007544Estuarine microbial communities from the Columbia River estuary - metaG 1449B-3EnvironmentalOpen in IMG/M
3300007639Estuarine microbial communities from the Columbia River estuary - metaG 1449C-02EnvironmentalOpen in IMG/M
3300007670Estuarine microbial communities from the Columbia River estuary - metaG 1449C-3EnvironmentalOpen in IMG/M
3300007972Coastal water column microbial communities from Columbia River Estuary, Oregon, USA - CMOP_DNA_1460ABC_3.0umEnvironmentalOpen in IMG/M
3300008055Metatranscriptomes of the Eelgrass leaves and roots. Combined Assembly of Gp0128390, Gp0128391, Gp0128392, and Gp0128393Host-AssociatedOpen in IMG/M
3300008107Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-3-NAEnvironmentalOpen in IMG/M
3300008110Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0048-3-NAEnvironmentalOpen in IMG/M
3300008113Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0050-3-NAEnvironmentalOpen in IMG/M
3300008116Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0106-3-NAEnvironmentalOpen in IMG/M
3300008117Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-C-NAEnvironmentalOpen in IMG/M
3300008119Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample E2014-0110-C-NAEnvironmentalOpen in IMG/M
3300008120Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample E2014-0108-3-NAEnvironmentalOpen in IMG/M
3300008122Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample HABS-E2014-0124-100-LTREnvironmentalOpen in IMG/M
3300008258Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE4, Sample HABS-E2014-0110-3-NAEnvironmentalOpen in IMG/M
3300008266Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NAEnvironmentalOpen in IMG/M
3300008450Freshwater viral communities during cyanobacterial harmful algal blooms (CHABs) in Western Lake Erie, USA - Oct 27, 2014 all contigsEnvironmentalOpen in IMG/M
3300009081Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015EnvironmentalOpen in IMG/M
3300009159Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaGEnvironmentalOpen in IMG/M
3300009165Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015EnvironmentalOpen in IMG/M
3300009563Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 5, Depth 6m; RNA IDBA-UDEnvironmentalOpen in IMG/M
3300010354Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNAEnvironmentalOpen in IMG/M
3300010370Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_DNAEnvironmentalOpen in IMG/M
3300010885northern Canada Lakes Co-assemblyEnvironmentalOpen in IMG/M
3300011381Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel7S_1600h metaT (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300012516Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_RNA1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300012968Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.2_RNA1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300013004Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaGEnvironmentalOpen in IMG/M
3300013131 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_10mEnvironmentalOpen in IMG/M
3300013132 (restricted)Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_092012_9.5mEnvironmentalOpen in IMG/M
3300013372Freshwater microbial communities from Lake Erie, Ontario, Canada. Combined Assembly of 10 SPsEnvironmentalOpen in IMG/M
3300017723Freshwater viral communities from Lake Michigan, USA - Su13.ND.MM110.S.NEnvironmentalOpen in IMG/M
3300017774Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM110.S.DEnvironmentalOpen in IMG/M
3300019122Metatranscriptome of marine microbial communities from Baltic Sea - GS677_0p1EnvironmentalOpen in IMG/M
3300020048Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915EnvironmentalOpen in IMG/M
3300020157Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L224-25mEnvironmentalOpen in IMG/M
3300020172Freshwater lake microbial communities from Lake Erken, Sweden - P4710_102 megahit1EnvironmentalOpen in IMG/M
3300021963Estuarine water microbial communities from San Francisco Bay, California, United States - C33_657DEnvironmentalOpen in IMG/M
3300022200Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)EnvironmentalOpen in IMG/M
3300022407Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.DEnvironmentalOpen in IMG/M
3300022752Freshwater microbial communities from Lake Lanier, Atlanta, Georgia, United States - LL_1208_BBEnvironmentalOpen in IMG/M
33000243480.2um to 3um size fraction coassemblyEnvironmentalOpen in IMG/M
3300024350Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Miss_RepA_8dEnvironmentalOpen in IMG/M
3300024481Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Cont_RepC_0h (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300024505Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Yuk_RepA_8hEnvironmentalOpen in IMG/M
3300024568Metatranscriptome of freshwater microbial communities from Columbia River, Oregon, United States - Colum_Miss_RepA_8d (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025635Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_<0.8_DNA (SPAdes)EnvironmentalOpen in IMG/M
3300027123Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Yuk_RepA_8dEnvironmentalOpen in IMG/M
3300027152Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Colum_RepB_8dEnvironmentalOpen in IMG/M
3300027393Groundwater microbial communities from the Columbia River, Washington, USA, for microbe roles in carbon and contaminant biogeochemistry - GW-RW metaG T4_4-Nov-14 (SPAdes)EnvironmentalOpen in IMG/M
3300027486Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepC_8dEnvironmentalOpen in IMG/M
3300027538Freshwater microbial communities from Columbia River, Oregon, United States - Colum_Cont_RepB_8dEnvironmentalOpen in IMG/M
3300027659Freshwater lentic microbial communities from great Laurentian Lakes, MI, USA - Great Lakes metaG ER78MSRF (SPAdes)EnvironmentalOpen in IMG/M
3300027721Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015 (SPAdes)EnvironmentalOpen in IMG/M
3300027777Freshwater microbial communities from Lake Croche, Canada to study carbon cycling - C_140205_EF_MetaG (SPAdes)EnvironmentalOpen in IMG/M
3300027793Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027797Freshwater microbial communities from dead zone in Lake Erie, Canada - CCB hypolimnion July 2011 (SPAdes)EnvironmentalOpen in IMG/M
3300027798Freshwater lake microbial communities from Lake Michigan, USA - Sp13.BD.MM15.SD (SPAdes)EnvironmentalOpen in IMG/M
3300027970 (restricted)Freshwater microbial communities from meromictic Lake La Cruz, Castile-La Mancha, Spain - LaCruzMarch2015_14.5mEnvironmentalOpen in IMG/M
3300028394Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130628_MF_MetaG (v2)EnvironmentalOpen in IMG/M
3300029930Aquatic microbial communities from drinking water treatment plant in Pearl River Delta area, China - influent_20120727EnvironmentalOpen in IMG/M
3300029933Aquatic microbial communities from drinking water treatment plant in Pearl River Delta area, China - influent_20120727_2EnvironmentalOpen in IMG/M
3300031758Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123EnvironmentalOpen in IMG/M
3300031857Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA125EnvironmentalOpen in IMG/M
3300031951Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120EnvironmentalOpen in IMG/M
3300031963Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA116EnvironmentalOpen in IMG/M
3300032050Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA122EnvironmentalOpen in IMG/M
3300032116Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119EnvironmentalOpen in IMG/M
3300033418Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_AEnvironmentalOpen in IMG/M
3300033557Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_BEnvironmentalOpen in IMG/M
3300033979Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME30Aug2017-rr0003EnvironmentalOpen in IMG/M
3300033981Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011EnvironmentalOpen in IMG/M
3300033993Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2012-rr0037EnvironmentalOpen in IMG/M
3300034062Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Jul2012-rr0045EnvironmentalOpen in IMG/M
3300034071Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Oct2008D10-rr0110EnvironmentalOpen in IMG/M
3300034073Fracking water microbial communities from deep shales in Oklahoma, United States - MC-6-XLEnvironmentalOpen in IMG/M
3300034101Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107EnvironmentalOpen in IMG/M
3300034107Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Apr2017-rr0133EnvironmentalOpen in IMG/M
3300034119Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Jul2015-rr0166EnvironmentalOpen in IMG/M
3300034120Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2014-rr0172EnvironmentalOpen in IMG/M
3300034122Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME03Aug2014-rr0181EnvironmentalOpen in IMG/M
3300034279Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jul2014-rr0163EnvironmentalOpen in IMG/M
3300034356Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jun2014-rr0152EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI12421J11937_1017893513300000756Freshwater And SedimentMTTLAQMIDEVLINLSGYTYQQDRSTYLKTAVTTLTSPSTAPTILSLGDTSNVGKGILEIDEELMWVDSFDRVGNTATVSPYGR
Draft_1007706883300001605Hydrocarbon Resource EnvironmentsMTTLAQMIDEVLINLSGYTYQQDRSTYLRTAVTTLTSPSTAPTILSLGDTSNVGKGIIEVDEELMWVDSFD
RCM37_118535623300001850Marine PlanktonMATLTDMMNEVRANLAGYTFQQDRSTYLKTAVTTTTSSSASPLILSLGSTESVGKGVIEIDE
JGI25908J49247_1010812923300003277Freshwater LakeMSYTLSQMMDEVLINLSGYTFQQDRATHLTSAVTTTTSSSAAPLVLSLGSTDSVGKGVIEIDEELM
Ga0007787_1030546913300004240Freshwater LakeVTTLAEMIDEVLVNLSGYTYQQDRSTYLTAAVTTLTSPSSSPTILSLGSTQDLGKGVIEVDEELMWVSS
Ga0069718_1424302523300004481SedimentMSYTLSQMIDEVVMNLAGYTFQQDRSTYLKTAISTTTSSSASPLIISLGSTENVGKGVIEVDEELMWVDSFD
Ga0068877_1070396723300005525Freshwater LakeMSATLGTMIDETLINLAGYTVNQDRSTYLTAAVTALTSPSSNPTILSLHSTDNLGKGIIEVDNELMWVDSFDRIANTATI
Ga0068876_1046501933300005527Freshwater LakeMSATLGTMIDETLINLAGYTVNQDRSTYLTAAVTALTSPSSNPTILSLHSTDNLGKGIIEVDNE
Ga0049081_1010034313300005581Freshwater LenticVTTLSEMIDEVIINLSGYTYQQDRSTHLTAAVTTLTSPSSSPTILSLGSTDSVGKGVIEVGEELMWVDSF
Ga0049081_1028169913300005581Freshwater LenticMTTLSEMIDEVIINLSGYTYQQDRSTHLTAAVTTLTSPSSSPTILSLGSTDSVGKGVIEVGEELMWVDSF
Ga0073924_102494813300005992SandMTTLSEMIDEVTINLSGYTYQQDRSTHLTAAVTTLTSPSSSPTILSLGSTDSVGKGVLEVGEELMWVDSFDRIANTA
Ga0075470_1019256113300006030AqueousMTTFANMIDEVLINLSGYTFAQDRSTYLGASVTTTTSTSASPLILTLPTTENLGKGVIEIDEELMYVDTYDRV
Ga0075471_1057498023300006641AqueousMTTTLSNIMDEIQINLAGYTYQQDRATHLTSAVSTLTSPSTSPTVLSLGSTENLGKGVIEVDEELM
Ga0075464_1041734243300006805AqueousMIDEVLINLSGYTYQQDRSTYLTAAVTTLTSPSSSPTILSLGSTDSVGKGVLEVGEELMWVDSFDRVANTA
Ga0105050_1081965223300007516FreshwaterMTLTLTNLTDEVLINLSGYTLNQDRSTYLVEDISTLTSSSALPLIIKLGSTADVGKGTVQVDDELM
Ga0102861_104523913300007544EstuarineMTTLAQMIDEVLINLSGYTYQQDRSTYLKTAVTTLTSPSTAPTILSLGDTSNVGKGILEVDEEL
Ga0102865_112208913300007639EstuarineMTTLSEMIDEVIINLSGYTYQQDRSTYLTTAVTTLTSPSSSPTILSLGSTDSVGKGVLEVGEELM
Ga0102862_107979523300007670EstuarineMTTLAQMIDEVLINLSGYTYQQDRSTYLKTAVTTLTSPSTAPTILSLGDTSNVGKGILEVDEE*
Ga0105745_133295523300007972Estuary WaterMTTFANMIDEVLINLSGYTFSQDRSTYLSAPVTTTVSTGSSPTVLSLPTTDNLGKGVIEIDEELLYVDSYDRVSNTAT
Ga0108970_1116335913300008055EstuaryMTYTLAQMMDEVQINLSGYTYQQDRSTYLTAAVTTLTSPSTAPLVLSIGSTQDLGKGVIEIDSE
Ga0114340_1026355103300008107Freshwater, PlanktonMTYTLAQMMDEVQINLSGYTYQQDRSTYLTAAVTTTTSPSSSPLILSLASTQDLGKGVIEIDDR*
Ga0114340_119347343300008107Freshwater, PlanktonMTYTLAQMMDEVQINLSGYTYQQDRSTYLTAAVTTTTSPSSSPLILSLASTQDLGKGVIEIDD
Ga0114340_125353923300008107Freshwater, PlanktonMDEIQINLAGYTYQQDRATHLTSVVSTLTSPSTSPTVLSLGSTENLGKGVIEIDEELMWVDSFDRVANTATVAPY
Ga0114343_107408833300008110Freshwater, PlanktonMTTTLINLMDEVQINLAGYTYQQDRATHLTSAVSTLTSSSTSPTILSLGSTESIGKGVIEINEELLWLDSFDRVANTATVA
Ga0114343_107565753300008110Freshwater, PlanktonVTTTLTQMIDEVLINLSGYTYQQDRSTYLRTAVSTLTSPSTAPTILSLGDTSNVGKGIVEIDEELMWIDSFDRVGN
Ga0114346_114453653300008113Freshwater, PlanktonVTTFTEMIDEVLINLSGYTYQQDRSTYLTAAVTTLTSPSSSPTILSLGSTDSVGKGIIEVGEELMWIDSFDRVANTAT
Ga0114346_128012833300008113Freshwater, PlanktonMTTTLSNLIDEVLINLAGYTYQQERSTYLRTAVTSTVSTSNYPTVLSLGSSENLGKGIIEIGE
Ga0114350_102142013300008116Freshwater, PlanktonMTTLAQMIDEVLINLSGYTYQQDRSTYLKTAVTTLTSPSTAPTILSLGDTSNVGKGILEIDEELMWVDSFDRV
Ga0114350_102618793300008116Freshwater, PlanktonMSATLGTMIDETLINLAGYTVNQDRSTYLTAAVTALTSPSSNPTILSLHSTDNLGKGIIEVDNELM
Ga0114351_114885453300008117Freshwater, PlanktonMTYTLAQMMDEVQINLSGYTYQQDRSTYLTTAVTTLTSPSSSPLILSLGSTQDVGKGVIE
Ga0114354_117611233300008119Freshwater, PlanktonMTTTLTDLINEVQINLAGYTYQQDRATHLTSAVSTLTSPSTSPTVLSLGSTENLGKGVVEIDEELLWVDSFDRVANTATVS
Ga0114355_118763323300008120Freshwater, PlanktonMIDEVLINLSGYTFQQDRATHLTTAVTTLTSTSASPLILSLGSTDSVGKGILEIDEELLWVDSY
Ga0114359_110027433300008122Freshwater, PlanktonMTTTLANMIDEVLINLSGYTFQQDRATHLTTAVTTLTSTSASPLILSLGSTDSVGKGILEID
Ga0114840_100183213300008258Freshwater, PlanktonMIDETLINLSGYTYQQDRSTYLTSAVTTLTSPSSSPTILSLASTDSVGKGIIEVGEE
Ga0114840_106610513300008258Freshwater, PlanktonMTTLSQMIDEVLINLSGYTYQQDRSTYLRTAVSTLTSPSTSPTILSLGDTSNVGKGILEVDEELMWVDSFDRVGNTATVALYGR
Ga0114363_113118443300008266Freshwater, PlanktonMTVTFAQMIDEVQINLSGYTFQQDRSTYLTSAVTTLTSPSSSPTVLSLGSTTDFGKGVVEINDELLWI
Ga0114363_122898513300008266Freshwater, PlanktonMVDEVLVNLSGYTYQQDRSTYLSSAVTTLTSPSSSPTILSLGSTDNVGKGTIEVDDELMW
Ga0114880_117451243300008450Freshwater LakeMTYTLAQMMDEVQINLSGYTYQQDRSTYLTAAVTTLTSSSSSPLILSLGSTQDVGKGVIEIDSELLWVDSVDRVAN
Ga0114880_127757013300008450Freshwater LakeMTVTLAQMMDEVQINLSGYTFQQDRSTYLTAAVTTLTSPSSAPTVLSLGSTTDFGKGVVEIDDELL
Ga0105098_1068707233300009081Freshwater SedimentMIDEVLINLSGYTYQQDRSTYLRTAVTGLTSPSTSPTILSLGDTSNVDKGVLEVDE
Ga0114978_1084717223300009159Freshwater LakeMTTLAQMIDEVLINLSGYTYQQDRSTYLRDAVTTLTSPSTAPTILSLGDTSNVGKGIVEVDEELMWVDHFDRPS
Ga0105102_1049463833300009165Freshwater SedimentMMDEVQVNLAGYTFQQDRTTYISSAVSTTTSSSASPLILSLGSTESLGKGIVEIDEELLW
Ga0105102_1057697833300009165Freshwater SedimentMTTLAQMIDEVLINLSGYTYQQERSTYLKTAVTTLTSPSTAPTILSLGDTSNVGKGILEIDEELMWID
Ga0130030_102061813300009563Meromictic PondVTTTLADIIDEVQLNLSGYTFNQDRATHLRSTVTTTVSSSASPTILQLGSTDNVGKGVIEIDEELMWIDS
Ga0129333_1100965613300010354Freshwater To Marine Saline GradientVTTLGEMIDEVLINLSGYTYQQDRSTYLTSAVTTLTSPSSAPLILSLGSTQDLGKGIIEVDEELMWVSSFDRVGNTATIAPY
Ga0129333_1170076913300010354Freshwater To Marine Saline GradientMDEIQINLAGYTYQQDRATHLTSPVSTLTSPSTSPTILSLGSTENLGKGIVEIDEELMWVDSFDRIANTATVAPY
Ga0129336_1031585613300010370Freshwater To Marine Saline GradientMSATFGSMVDEVLINLAGYTLNQDRTTYLTAAFTSLTSPSSSPLVLSLASTDNLGKGIVEVNDELM
Ga0129336_1053512633300010370Freshwater To Marine Saline GradientVTTLGSMIDEVLINLSGYTYQQDRSTYLTAAVTTLTSPSSSPTILSLGSTDSVGKGIIEVDEE
Ga0129336_1064016723300010370Freshwater To Marine Saline GradientMTYTLSQIMDEVQINLSGYTYQQDRSTYLVSAVTTTTSPSSSPLVLSLGSTQDLGKGVVEIDEELIWVDSVDRVANTATVAPYG
Ga0133913_1127687763300010885Freshwater LakeMTTTLTDLINEVQINLAGYTYQQDRATHLTSAITGTTSSSASPTILSLGSTENLGKGVVEIDEELMWVDSFDRVANT
Ga0102688_155236133300011381Freshwater LakeMSATLGTMIDETLINLAGYTINQDRSTYLTAAVTALTSPSSNPTILSLHSTDNLGKGIIEVDTELMW
Ga0129325_119508433300012516AqueousVTTTLTDIIDEVQLNLSGYTFNQDRATYLRAAVTGTTSSSADPTILQLGSTENVGKGVIEIEEELMWSDSFDRISN
Ga0129337_118600213300012968AqueousVTTLAEMIDEVLVNLSGYTYQQDRSTYLTAAVTTLTSPSSSPTILSLGSTQDLGKGIIEVDEELMWVSSFDRVG
Ga0164293_1041745143300013004FreshwaterMATTLSNLIDEVLMNLSGYTFQQERSTYLSSPVTSTTSPSSNPTILSLGSTDNVGKGVLEIDSELFWVDSFDRVANTAT
(restricted) Ga0172373_1040288733300013131FreshwaterVTATFNELVDEVLVNLSGYTYQQDRSTYLTSAVSTLTSPSSSPTILSLGSTDNVGKGIIEVDDELMWV
(restricted) Ga0172372_1087438913300013132FreshwaterVTTLSEMIDEVLINLSGYTYQQDRSTYLTAAVTTLTSPSSSPTILSLASTDSVGKGILEVGEELMWVDSFDRIANTATV
Ga0177922_1031470213300013372FreshwaterMTTLAEMIDEVLINLSGYTYQQDRSTYLTAAVTTLTSPSSSPTILSLGSTDSVGKGVLEVGEELMW
Ga0181362_106469133300017723Freshwater LakeMTVTLREIIDEVLINLSGYTYQQDRSTHLTAAVTTLTSPSSSPTILSLGSTDSVGKGVLEIGEELMWVASFD
Ga0181358_113376243300017774Freshwater LakeVTTLSEMIDETLINLSGYTYQQDRSTHLTTAVTVLTSPSSSPTILSLASTDSVGKGVIEVGEEL
Ga0188839_101820313300019122Freshwater LakeMTTTLENMIDEVLINLAGYTFQQDRSTYLKTPVTTTTSSSASPLILSLGSTESVGKGIVEID
Ga0207193_118610163300020048Freshwater Lake SedimentMTTLAQMIDEVLINLSGYTYQQDRSTYLKTAVTTLTSPSTAPTILSLGDTSNVGKGILEVDEELMWVDSFDRVGNTATVSP
Ga0194049_112184033300020157Anoxic Zone FreshwaterMATTLTNMMDEVQVNLAGYTFQQDRATYLTSAITTTTSSSTSPLILSLGSTESVGKGTVEIEEELLWIDSYDRV
Ga0211729_1014019543300020172FreshwaterVTTLSEMIDEVLINLSGYTYQQDRSTYLTTAVTTLTSPSSSPTILSLASTDSVGKGVLEVGEE
Ga0222712_10080147103300021963Estuarine WaterVTTLANLIDEVLINLSGYTYQQERSTYLTSAVTTLTSPSSNPTILSLGSTDNVGKGILEIDEELIWVDSFDRVGNT
Ga0196901_126165623300022200AqueousMTTTLANMIDEVQVNLAGYTFQQDRSTYLKNAVTTTTSSSTSPLVLSLGSTDSVGKGVVEIDEELMWVDSYDRVGN
Ga0181351_116398443300022407Freshwater LakeMATLLNMIDETLINLAGYTLQQDRSTYLASAVTTTTSTSASPLILTLGSTESVGKGIIEI
Ga0214917_1009405883300022752FreshwaterMTTLAEMIDEVLINLSGYTYQQDRSTHLTAAVTTLTSPSSSPTILSLGSTDSVGKGVIEVGEELMWIDSFDRVANTA
Ga0214917_1016180413300022752FreshwaterMTYTLAQMMDEVQINLSGYTYQQDRSTYLTTAITTLTSPSSSPLVITLGSTQDVGKGIIE
Ga0244776_1010683873300024348EstuarineMTTTLENMIDEVLINLAGYTFQQDRATHLTSAVTTTTSTSASPLILSLGSTESVGKGIIEIEEEL
Ga0255167_107941213300024350FreshwaterVTTLGEMIDETLINLSGYTYQQDRSTYLTAAVTTLTSPSSSPTVLSLGSTDSVGKGILEVDEE
Ga0256330_103948413300024481FreshwaterMATLTDMMNEVRANLAGYTFQQDRSTYLRTAVTTTTSSSASPLILSLGSTESVGKGIIEIDE
Ga0255150_100919963300024505FreshwaterMATLTDMMNEVRANLAGYTFQQDRSTYLRTAVTTTTSSSASPLILSLGSTESVGKGIIEIDEE
Ga0255238_100897913300024568FreshwaterMTTLSEMIDEVTINLSGYTYQQDRSTHLTAAVTTLTSPSSSPTILSLGSTDSVGKGVIEVGEELMWVDSF
Ga0255238_116001923300024568FreshwaterMTTLSEMIDEVTINLSGYTYQQDRSTHLTAAVTTLTSPSSSPTILSLGSTDSVGKGVIEVGEELMWVDSFDRVANTA
Ga0208147_104094413300025635AqueousVTTLSNMIDEVLINLSGYTYQQDRSTYLTAAVTTLTSPSSSPTILSLGSTDSVGKGVLEVGEELMWVDSFDRVANTA
Ga0255090_100402413300027123FreshwaterMTTLSEMIDEVTINLSGYTYQQDRSTHLTAAVTTLTSPSSSPTILSLGSTDSVGKGVIEVGEELMWVDSFDRVANT
Ga0255100_100760913300027152FreshwaterMTTLSEMIDEVTINLSGYTYQQDRSTHLTAAVTTLTSPSSSPTILSLGSTDSVGKGVIEVGEELMW
Ga0209867_105651213300027393SandMTTLSEMIDEVLINLSGYTYQQDRSTYLTTAVTTLTSPSSSPTILSLGSTDSVGKGVLEVGEELMWVD
Ga0255086_100516813300027486FreshwaterMTTLSEMIDEVIINLSGYTYQQDRSTHLTAAVTTLTSPSSSPTILSLGSTDSVGKGVIEVGEELMWVDSFDRVANTATVAPYG
Ga0255085_101650713300027538FreshwaterMTTLSEMIDEVTINLSGYTYQQDRSTHLTAAVTTLTSPSSSPTILSLGSTDSVGKGVIEVGEELMWVDSFDRVANTATV
Ga0208975_105326713300027659Freshwater LenticVTTLSEMIDEVIINLSGYTYQQDRSTHLTAAVTTLTSPSSSPTILSLGSTDSVGKGVIEVGEELMWVDSFDRVANT
Ga0209492_121314033300027721Freshwater SedimentMTTLAQMIDEVLINLSGYTYQQERSTYLKTAVTTLTSPSTAPTILSLGDTSNVGKGILEIDEELMWVDSFDRVSNTAT
Ga0209829_1003975693300027777Freshwater LakeMADTLANMIDEVLSNLSGYTLNQDRSTYLKTEITTLTSPSASPLVVSLGSTDSVGKGTIQIDDELMWVDSYDRVGNT
Ga0209972_1036015233300027793Freshwater LakeMSATLGTMIDETLINLAGYTVNQDRSTYLTAAVTALTSPSSNPTILSLHSTDNLGKGIIEIDNELMW
Ga0209107_1009529763300027797Freshwater And SedimentMTTTLTNMIDEVQVNLAGYTFQQERSTYLRTAVTTTTSSSAAPLVLSLGSIDSVGKGIIEIDEELMW
Ga0209107_1047125813300027797Freshwater And SedimentMTTTLENMIDEVLINLAGYTFQQDRSTYITSPVTTTTSSSASPLILSLGSTDSVGKGIVEIDEELMWIDSYDRIANTA
Ga0209353_1018066913300027798Freshwater LakeMSYTLSQMMDEVLINLSGYTFQQDRATHLTSAVTTTTSSSAAPLVLSLGSTDSVGKGVIEIDEELMWID
(restricted) Ga0247837_137772823300027970FreshwaterMIDETLINLSGYTYQQDRSTHLTSAVTVLTSPSSSPTVLSLGSTDSVGKGVIEVGEELMWVDSFDR
Ga0304730_104077783300028394Freshwater LakeMTTTLANMMDEVQVNLAGYTFQQDRTTYISSAVSTTTSSSASPLVLSLGSTESLGKGIVEIDEELLWVDSYDR
Ga0119944_102815533300029930AquaticMTYTLAQMMDEVQINLSGYTYQQDRSTYLNSAVTTTTSPSSSPLILSLASTQDLGKGIVEIDDELLWIDNVDRVANTAT
Ga0119944_104358933300029930AquaticMTYTLAQMMDEVQINLSGYTYQQDRSTYLTAAVTTLTSPSSAPLTLSLASTQDLGKGII
Ga0119945_103874823300029933AquaticVTTLSEMIDEVLINLSGYTYQQDRSTYLTAAVTTLTSPSSSPTILSLASTDSVGKGVLEVGEELMWVDSFDRIANTATVAPYG
Ga0315907_1016257713300031758FreshwaterVTTLNEMIDEVLINLSGYTYQQDRSTYLTAAVTTLTSPSSSPTILSLGSTDSVGKGILEIDEELMWISSFDR
Ga0315907_1044200323300031758FreshwaterMTTTLSNIMDEIQINLAGYTYQQDRATHLTSAVTTLTSPSSSPTILSLGSTENLGKGVVEIDEELMWVDS
Ga0315907_1123887123300031758FreshwaterMIDETLINLSGYTYQQDRSTYLTSAVTTLTSPSSSPTILSLASTDSVGKGIIEVGEELMWIDSFDR
Ga0315909_1019955653300031857FreshwaterVTTTLTDLINEVQLNLSGYTFNQDRATHLRSTVTTTVSSSASPTILDLGSTDNVGKGVIEIDEELMWIDSFDRISNTATIS
Ga0315909_1020210513300031857FreshwaterVTTLSEMIDEVLINLSGYTYQQDRSTYLTAAVTTLTSPSSSPTILSLASTDSVGKGILEVGEELMWVDSFDR
Ga0315909_1026264153300031857FreshwaterVTTTFGQMVDEVLVNLSGYTYQQDRSTYLTSAVTTLTSPSSSPTILSLGSTDNVGKGTIEVDDELMWVDSFDRVA
Ga0315909_1027098713300031857FreshwaterMSATLGTMIDETLINLAGYTVNQDRSTYLTAAVTALTSPSSNPTILSLHSTDNL
Ga0315904_10133411113300031951FreshwaterMTVTLAQMMDEVQINLSGYTFQQDRSTYLTAAVTTLTSPSSAPTVLSLGSTTDFGKGVVEIDDELLWIDS
Ga0315904_1017299773300031951FreshwaterMTTTLSNIMDEIQINLAGYTYQQDRATHLTSAVTTLTSPSSSPTILSLGSTENLGKGVVEIDEELMWVDSFDRIANTATVA
Ga0315904_1039685163300031951FreshwaterMSATLGTMIDETLINLAGYTINQDRSTYLTAAVTALTSPSSNPTVLSLHSTDNLGKGI
Ga0315904_1067524143300031951FreshwaterMTVTLAQMMDEVQINLSGYTFQQDRSTYLTAAVTTLTSPSSAPTVLSLGSTTDFGKGVVEIDDELLWI
Ga0315904_1132659223300031951FreshwaterVTTLSEMIDEVLINLSGYTYQQDRSTYLTAAVTTLTSPSSSPTILSLASTDSVGKGVLEVGEELMWVDSFDRIANTATV
Ga0315901_1041258713300031963FreshwaterVTTLQEMIDEVLINLSGYTYQQDRSTYLTTAVTTLTSPSSSPTILSLGSTDSVGKGIIEVGEELMWIDSFD
Ga0315906_1134167813300032050FreshwaterMSATLGTMIDETLINLAGYTVNQDRSTYLTAAVTALTSPSSNPTILSLHSTDNLGKGIIEVENE
Ga0315903_1029627353300032116FreshwaterMTYTLAQMMDEVQINLSGYTYQQDRSTYLNSAVTTTTSPSSSPLILSLASTQDLGKGIVEIDDELLWVDNVDRVANT
Ga0316625_10126645533300033418SoilVTSTLSNLIDEVLINLSGYTYQQERSTYLTQAVTTLTSPSSSPTILSVGSTDNIGKGVLEIDEELIWVDSFDRVANTAT
Ga0316617_10235574513300033557SoilMTTLSQMIDEVLINLSGYTYQQDRSTYLTGAVSTLTSPSSSPTILSLGSSQDVGKGIIEV
Ga0334978_0230678_683_9013300033979FreshwaterMTTTLTQMIDEVLINLSGYTYQQDRSTYLRTAVSTLTSPSTAPTILSLGDTSNVGKGVLEIDEELMWVDSFDR
Ga0334982_0080352_2_1783300033981FreshwaterMTTLSEMIDEVLINLSGYTYQQDRSTYLTTAVTTLTSPSSSPTILSLGSTDSVGKGVLE
Ga0334982_0083427_1531_17073300033981FreshwaterMTTLAEMIDEVLINLSGYTYQQDRSTYLTTAVTTLTSPSSSPTILSLGSTDSVGKGVLE
Ga0334994_0415441_1_1713300033993FreshwaterMIDEVAVNLAGYTFQQDRATYLTTAVTTTTSSSASPLVLSLGSTDNVGKGVIEIDEE
Ga0334994_0582084_328_5043300033993FreshwaterMPTLTNMIDEVAVNLSGYTFQQDRATYLTTAVSTTTSSSASPLVLQLGSTDSVGKGVIE
Ga0334995_0719102_3_2093300034062FreshwaterMIDEVAVNLAGYTFQQDRSTYLASAVTTTTSTSASPLILSLGSTDNVGKGVIEIDEELMWVDSYDRVAN
Ga0335028_0544425_2_2053300034071FreshwaterMTTLGQMIDEVLINLSGYTYQQDRSTYLRTAISTLTSPSTSPTILSLGDTSNVGKGVLEVDEELMWVD
Ga0310130_0014804_3_1943300034073Fracking WaterMTTLSEMIDEVLINLSGYTYQQDRSTYLTSAITTLTSPSSSPTILSLGSTDNLGKGILEVDEEL
Ga0335027_0679121_417_6143300034101FreshwaterMTTTLSNIMDEIQINLAGYTYQQDRATHLTSAVSTLTSPSSSPTILSLGSTENLGKGVVEIDEELL
Ga0335037_0007354_1_2313300034107FreshwaterMTTLAQMIDEVLINLSGYTYQQDRSTYLKTAVTTLTSPSTSPTILSLGDTSNVGKGVLEIDEELMWVDSFDRVGNTA
Ga0335054_0319393_651_9053300034119FreshwaterMTTTLTQMIDEVLINLSGYTYQQDRSTYLKTAVSTLTSPSTAPTILSLGDTSNVGKGVLEIDEELMWVDSFDRVGNTATVAPYGR
Ga0335056_0423364_520_7113300034120FreshwaterMTTLAQMIDEVLINLSGYTYQQDRSTYLRTAVTTLTSPSTSPTILSLGDTSNVGKGILEVDEEL
Ga0335060_0467631_460_6543300034122FreshwaterMTTLAQMIDEVLINLSGYTYQQDRSTYLKTAVSTLTSPSTAPTILSLGDTSNVGKGILEVDEELM
Ga0335052_0387933_1_1803300034279FreshwaterMTTLAQMIDEVLINLSGYTYQQDRSTYLRTAVTTLTSPSTSPTILSLGDTSNVGKGILEV
Ga0335048_0280842_2_2353300034356FreshwaterMTTLAQMIDEVLINLSGYTYQQDRSTYLKTAVTTLTSPSTAPTILSLGDTSNVGKGILEVDEELMWVDSFDRVGNTAT


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.