Metagenome Family F068739

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F068739
Family Type	Metagenome
Number of Sequences	124
Average Sequence Length	44 residues
Representative Sequence	QKLLAAELRQEAARIAHRNTLRKENATNTTQLRGVLVNLLQHQ
Number of Associated Samples	109
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.42 %
% of genes near scaffold ends (potentially truncated)	95.97 %
% of genes from short scaffolds (< 2000 bps)	91.94 %
Associated GOLD sequencing projects	108
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.59

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.387 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (10.484 % of family members)
Environment Ontology (ENVO)	Unclassified (26.613 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.806 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.75% β-sheet: 0.00% Coil/Unstructured: 42.25%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.59
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.59
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF04335	VirB8	1.61
PF00561	Abhydrolase_1	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG3736	Type IV secretory pathway, component VirB8	Intracellular trafficking, secretion, and vesicular transport [U]	1.61

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.39 %
Unclassified	root	N/A	1.61 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.39 %
Unclassified	root	N/A	1.61 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.39 %
Unclassified	root	N/A	1.61 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	97.58 %
Unclassified	root	N/A	1.61 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	74.19 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	15.32 %
Unclassified	root	N/A	1.61 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	74.19 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	8.06 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1.61 %
Unclassified	root	N/A	1.61 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	74.19 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	8.06 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	1.61 %
Unclassified	root	N/A	1.61 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	74.19 %
Bryobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter	1.61 %
Unclassified	root	N/A	1.61 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	74.19 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	1.61 %
Unclassified	root	N/A	1.61 %
Acidobacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459014\|G1P06HT02GMKLI	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	518	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105082044	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	826	Open in IMG/M
3300003369\|JGI24140J50213_10249436	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	545	Open in IMG/M
3300004633\|Ga0066395_10978871	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	515	Open in IMG/M
3300005167\|Ga0066672_10559098	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	741	Open in IMG/M
3300005332\|Ga0066388_102447073	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	948	Open in IMG/M
3300005568\|Ga0066703_10309238	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	955	Open in IMG/M
3300005764\|Ga0066903_101228052	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1394	Open in IMG/M
3300005764\|Ga0066903_107257548	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300005995\|Ga0066790_10096990	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	1267	Open in IMG/M
3300006086\|Ga0075019_10702314	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300006642\|Ga0075521_10627301	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	529	Open in IMG/M
3300006954\|Ga0079219_11568490	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	601	Open in IMG/M
3300009038\|Ga0099829_10431147	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1091	Open in IMG/M
3300009038\|Ga0099829_10833801	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	765	Open in IMG/M
3300009523\|Ga0116221_1564826	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	500	Open in IMG/M
3300009524\|Ga0116225_1488292	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300009636\|Ga0116112_1107284	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	786	Open in IMG/M
3300010047\|Ga0126382_11775080	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300010048\|Ga0126373_11141967	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	845	Open in IMG/M
3300010048\|Ga0126373_11297786	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	794	Open in IMG/M
3300010048\|Ga0126373_12265228	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Acidobacterium	604	Open in IMG/M
3300010048\|Ga0126373_12940778	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300010304\|Ga0134088_10418056	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	655	Open in IMG/M
3300010339\|Ga0074046_10694157	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300010339\|Ga0074046_10853092	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	531	Open in IMG/M
3300010360\|Ga0126372_11404049	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	731	Open in IMG/M
3300010361\|Ga0126378_12306044	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300010366\|Ga0126379_11785830	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	719	Open in IMG/M
3300010376\|Ga0126381_101447862	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	993	Open in IMG/M
3300010376\|Ga0126381_101744924	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	899	Open in IMG/M
3300010376\|Ga0126381_102295164	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	775	Open in IMG/M
3300011269\|Ga0137392_10399302	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1141	Open in IMG/M
3300012203\|Ga0137399_10132554	All Organisms → cellular organisms → Bacteria → Acidobacteria	1971	Open in IMG/M
3300012351\|Ga0137386_10138388	All Organisms → cellular organisms → Bacteria → Acidobacteria	1738	Open in IMG/M
3300012361\|Ga0137360_10267787	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1409	Open in IMG/M
3300012532\|Ga0137373_10111749	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2367	Open in IMG/M
3300012925\|Ga0137419_11045180	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	678	Open in IMG/M
3300012930\|Ga0137407_10876157	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	849	Open in IMG/M
3300012971\|Ga0126369_12314302	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300014158\|Ga0181521_10095004	All Organisms → cellular organisms → Bacteria → Acidobacteria	1847	Open in IMG/M
3300014159\|Ga0181530_10117014	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1567	Open in IMG/M
3300014199\|Ga0181535_10745798	All Organisms → cellular organisms → Bacteria → Acidobacteria	556	Open in IMG/M
3300016319\|Ga0182033_10300447	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1325	Open in IMG/M
3300016357\|Ga0182032_10256793	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1361	Open in IMG/M
3300016371\|Ga0182034_10146102	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1769	Open in IMG/M
3300016371\|Ga0182034_11994483	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300016445\|Ga0182038_11681912	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300017924\|Ga0187820_1213598	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	607	Open in IMG/M
3300017933\|Ga0187801_10170789	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	853	Open in IMG/M
3300017943\|Ga0187819_10504692	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	690	Open in IMG/M
3300017972\|Ga0187781_11387231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300017974\|Ga0187777_10088837	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2019	Open in IMG/M
3300017995\|Ga0187816_10408550	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300018005\|Ga0187878_1353383	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300018012\|Ga0187810_10143956	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	954	Open in IMG/M
3300018014\|Ga0187860_1218707	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	771	Open in IMG/M
3300018033\|Ga0187867_10629397	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	586	Open in IMG/M
3300018035\|Ga0187875_10135501	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1384	Open in IMG/M
3300018037\|Ga0187883_10246768	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	913	Open in IMG/M
3300018043\|Ga0187887_10174721	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1282	Open in IMG/M
3300018044\|Ga0187890_10544039	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	654	Open in IMG/M
3300018086\|Ga0187769_11453061	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300019082\|Ga0187852_1205671	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	811	Open in IMG/M
3300021432\|Ga0210384_10134386	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2220	Open in IMG/M
3300021560\|Ga0126371_10019772	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	6201	Open in IMG/M
3300025484\|Ga0208587_1063539	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	828	Open in IMG/M
3300025579\|Ga0207927_1082328	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	757	Open in IMG/M
3300025916\|Ga0207663_10308174	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1185	Open in IMG/M
3300025928\|Ga0207700_10268380	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1464	Open in IMG/M
3300026845\|Ga0207760_119449	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300026895\|Ga0207758_1015934	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	736	Open in IMG/M
3300027019\|Ga0207857_1043784	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	683	Open in IMG/M
3300027371\|Ga0209418_1002354	All Organisms → cellular organisms → Bacteria → Acidobacteria	2341	Open in IMG/M
3300027516\|Ga0207761_1070023	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681	Open in IMG/M
3300027680\|Ga0207826_1108986	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	760	Open in IMG/M
3300027703\|Ga0207862_1022978	All Organisms → cellular organisms → Bacteria → Acidobacteria	1865	Open in IMG/M
3300027825\|Ga0209039_10183182	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	858	Open in IMG/M
3300027825\|Ga0209039_10188787	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	842	Open in IMG/M
3300027911\|Ga0209698_10949577	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300027915\|Ga0209069_10044615	All Organisms → cellular organisms → Bacteria → Acidobacteria	2080	Open in IMG/M
3300028665\|Ga0302160_10116248	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	600	Open in IMG/M
3300028679\|Ga0302169_10083045	All Organisms → cellular organisms → Bacteria → Acidobacteria	765	Open in IMG/M
3300028868\|Ga0302163_10027077	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1278	Open in IMG/M
3300028873\|Ga0302197_10220769	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	877	Open in IMG/M
3300029817\|Ga0247275_1106569	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	736	Open in IMG/M
3300029908\|Ga0311341_10567858	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300030002\|Ga0311350_11391232	All Organisms → cellular organisms → Bacteria → Acidobacteria	624	Open in IMG/M
3300030043\|Ga0302306_10293167	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300030688\|Ga0311345_10319599	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1452	Open in IMG/M
3300030838\|Ga0311335_10154619	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1513	Open in IMG/M
3300031231\|Ga0170824_112541901	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	679	Open in IMG/M
3300031682\|Ga0318560_10557361	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300031708\|Ga0310686_115206096	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300031715\|Ga0307476_10408268	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1003	Open in IMG/M
3300031715\|Ga0307476_11347407	Not Available	520	Open in IMG/M
3300031747\|Ga0318502_10527091	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	709	Open in IMG/M
3300031820\|Ga0307473_10310425	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	997	Open in IMG/M
3300031823\|Ga0307478_10002286	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15305	Open in IMG/M
3300031890\|Ga0306925_10056441	All Organisms → cellular organisms → Bacteria → Acidobacteria	4104	Open in IMG/M
3300031890\|Ga0306925_10061306	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3944	Open in IMG/M
3300031912\|Ga0306921_11508740	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	734	Open in IMG/M
3300031941\|Ga0310912_10651102	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	818	Open in IMG/M
3300031942\|Ga0310916_10813539	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	786	Open in IMG/M
3300031945\|Ga0310913_10494536	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	868	Open in IMG/M
3300031945\|Ga0310913_11117422	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300031946\|Ga0310910_11527895	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300031962\|Ga0307479_10800206	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	918	Open in IMG/M
3300032035\|Ga0310911_10707730	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	583	Open in IMG/M
3300032160\|Ga0311301_11835270	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	719	Open in IMG/M
3300032770\|Ga0335085_10682727	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1144	Open in IMG/M
3300032770\|Ga0335085_11125132	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	840	Open in IMG/M
3300032783\|Ga0335079_10668083	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1089	Open in IMG/M
3300032805\|Ga0335078_11318652	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	822	Open in IMG/M
3300032828\|Ga0335080_11133582	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	789	Open in IMG/M
3300032828\|Ga0335080_12340710	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300032829\|Ga0335070_11349363	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	652	Open in IMG/M
3300032892\|Ga0335081_11860016	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300032954\|Ga0335083_10085354	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3166	Open in IMG/M
3300033158\|Ga0335077_11559189	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	630	Open in IMG/M
3300033289\|Ga0310914_11610522	Not Available	553	Open in IMG/M
3300033804\|Ga0314863_116179	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300033822\|Ga0334828_038512	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1375	Open in IMG/M
3300033983\|Ga0371488_0190415	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1042	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.19%
Engineered	Engineered	0.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	81.45%
Aquatic	Environmental → Aquatic	17.74%
Solid Waste	Engineered → Solid Waste	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	72.58%
Freshwater	Environmental → Aquatic → Freshwater	15.32%
Peat	Environmental → Terrestrial → Peat	8.87%
Sediment	Environmental → Aquatic → Sediment	2.42%
Grass	Engineered → Solid Waste → Grass	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	48.39%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	15.32%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	13.71%
Loam	Environmental → Terrestrial → Soil → Loam	10.48%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.87%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.42%
Composting	Engineered → Solid Waste → Grass → Composting	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.58%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	19.35%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	12.90%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	10.48%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.87%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.87%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.03%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	3.23%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.42%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.42%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.61%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.81%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.81%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.81%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.06%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	8.06%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.06%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.26%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	6.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.45%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.03%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.03%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	4.03%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	3.23%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.42%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.42%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.42%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.42%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	2.42%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.61%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	1.61%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.61%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.81%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.81%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.81%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.81%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.81%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.81%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459014	Litter degradation PV2	Engineered	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300003369	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-22A	Environmental	Open in IMG/M
3300004633	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005995	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 3 DNA2013-050	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006642	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostAB12-D	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009523	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG	Environmental	Open in IMG/M
3300009524	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_c_BC metaG	Environmental	Open in IMG/M
3300009636	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_150	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010304	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012203	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300012925	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental	Open in IMG/M
3300014159	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_60_metaG	Environmental	Open in IMG/M
3300014199	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaG	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental	Open in IMG/M
3300017943	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_4	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018012	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_5	Environmental	Open in IMG/M
3300018014	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_40	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300019082	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_40	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025484	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210 deep-092012 (SPAdes)	Environmental	Open in IMG/M
3300025579	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-2 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026845	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 24 (SPAdes)	Environmental	Open in IMG/M
3300026895	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 12 (SPAdes)	Environmental	Open in IMG/M
3300027019	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 22 (SPAdes)	Environmental	Open in IMG/M
3300027371	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027516	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 34 (SPAdes)	Environmental	Open in IMG/M
3300027680	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 80 (SPAdes)	Environmental	Open in IMG/M
3300027703	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028665	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E1_3	Environmental	Open in IMG/M
3300028679	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N1_3	Environmental	Open in IMG/M
3300028868	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_E2_3	Environmental	Open in IMG/M
3300028873	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_1	Environmental	Open in IMG/M
3300029817	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Bog25	Environmental	Open in IMG/M
3300029908	II_Bog_E1 coassembly	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030043	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Palsa_E3_1	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300030838	I_Fen_N1 coassembly	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033804	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_0_20	Environmental	Open in IMG/M
3300033822	Peat soil microbial communities from Stordalen Mire, Sweden - 714 S1 5-9	Environmental	Open in IMG/M
3300033983	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fraction	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2PV_03542910	2170459014	Switchgrass, Maize And Mischanthus Litter	ALTQKMLAAELRQEAAHIAHQNGFRKRGAAFSTQLRGVMMNLLQHN
INPhiseqgaiiFebDRAFT_1050820442	3300000364	Soil	SQALTQKMLAAELRQEAAHIAHQNGFRKRGAAFSRQLRGVIINLLQHN*
JGI24140J50213_102494361	3300003369	Arctic Peat Soil	AITSAVHAQALTQKLLAAELRQEAARIAHRNTLRKENATNTTQLRGVLVNLLQHQ*
Ga0066395_109788712	3300004633	Tropical Forest Soil	QKMLAAELRQEAAHIAHKNGFRKRGATFTTQMRTLMIHLLQHN*
Ga0066672_105590981	3300005167	Soil	SIRSQALTQKMLAAELRQEAAHISHQNGFRKRGATFTTQFRTLMMNLLQHN*
Ga0066388_1024470732	3300005332	Tropical Forest Soil	QALTQMMLAAELRQEAAKMAHDNELRKHGATFATQLRGAIINLLQHN*
Ga0066703_103092381	3300005568	Soil	SIRSQALTQKMLAAELRQEAARIAHQNGLRKRGAMFTTQLRGFIMNLSQHN*
Ga0066903_1012280523	3300005764	Tropical Forest Soil	TALTSAIHAQALTQKLLAAELRQEAARIAHRNTLRKENANNTTELRGVLVNLLQHQ*
Ga0066903_1072575482	3300005764	Tropical Forest Soil	QEAAHLAHRNTLLKENANNTNLLLGVLVNLLQHQ*
Ga0066790_100969903	3300005995	Soil	HAQALTQKLLAAELRQEAARIAHRNTLRKENATNTTQLRGVLVNLLQHQ*
Ga0075019_107023141	3300006086	Watersheds	LRQEAARIAHQNGLRKRGAMFTTQLRGTIMNLSKHN*
Ga0075521_106273012	3300006642	Arctic Peat Soil	QALTQKLLAAELRQEAARIAHRNTLRKENATNTTQLRGVLVNLLQHQ*
Ga0079219_115684901	3300006954	Agricultural Soil	SAVASSIRSQALTQKMLAAELRQEAAHIAHQNGFRKRGATFTTQFRALLMNLLQHN*
Ga0099829_104311471	3300009038	Vadose Zone Soil	RLEAARIAHQNGLRKRGAMFTTQLRGFIMNLSQHN*
Ga0099829_108338012	3300009038	Vadose Zone Soil	MLAAELRQEAARIAHQNGLRKRGAMFTTQLRGTIMNLSKHN*
Ga0116221_15648261	3300009523	Peatlands Soil	ELRQEAARIAHQNGLRKRGAMFTTQLRGTIMNLSKHN*
Ga0116225_14882922	3300009524	Peatlands Soil	LAAELRQEAAHVAHQNGFRKRGAEFTTGLRGVITNLLQHN*
Ga0116112_11072841	3300009636	Peatland	AELRQEAARIAHRNTLRKENATNTTTLRGVLVNLLQHQ*
Ga0126382_117750802	3300010047	Tropical Forest Soil	MLAAELRQEAAHLAHQNGLRKRGAAFTTELRGVVINLLEHN*
Ga0126373_111419671	3300010048	Tropical Forest Soil	QKLLAAELRLEAARIAHRNTLRKENAGNTTQLRGVLVNLLQHQ*
Ga0126373_112977861	3300010048	Tropical Forest Soil	LAAELRQEAAKMAHENELRKHGATFTTQLRGAIINLLQHN*
Ga0126373_122652282	3300010048	Tropical Forest Soil	HSQALTQKMLAAELRQEAARLAHRNTLGKENATNTTQLRGVLVNLLEHQ*
Ga0126373_129407781	3300010048	Tropical Forest Soil	KMLAAELRQDAARLAHRNTFRKENASNTTQLRGVLVNLLQHQ*
Ga0134088_104180561	3300010304	Grasslands Soil	KMLAAELRQEAARLAHRNTLRKENTNNTNQLRGVMVNLLQHQ*
Ga0074046_106941572	3300010339	Bog Forest Soil	AELRQEAARIAHRNTLRKENATNTTQLRGVLVNLLQHQ*
Ga0074046_108530921	3300010339	Bog Forest Soil	QALTQKMLAAELRQEAARIAHQNGLRKRGAMFTTQLRGIITNLSQHH*
Ga0126372_114040491	3300010360	Tropical Forest Soil	KMLAAELRQEAARLAHRNTLRKDNATNTTQLRGVLVNLLQHQ*
Ga0126378_123060441	3300010361	Tropical Forest Soil	AAELRQEAARLAHQNTLRKDNATNTTQLRGVLVNLLQHQ*
Ga0126379_117858301	3300010366	Tropical Forest Soil	ITSAIHAQALTQKLLAAELRQEAARLAHRNTLRKENAANTTQLRGVLVNLLQHQ*
Ga0126381_1014478622	3300010376	Tropical Forest Soil	RQESARLAHQNTLRKENATNTTQLRGVLVNLLEHQ*
Ga0126381_1017449241	3300010376	Tropical Forest Soil	MVSGIQSEALTQKMLAAELRQEAARLAHGNTLRKENATNTTQLRGVLVNLLEHR*
Ga0126381_1022951641	3300010376	Tropical Forest Soil	TSAIHAQVLTQRLLAAELRQEAARLAHRNTLRKKNATNTTQLRGVLVNLLQHQ*
Ga0137392_103993023	3300011269	Vadose Zone Soil	QKMLAAELRLEAARIAHQNGLRKRGAMFTTQLRGFIMNLSQHN*
Ga0137399_101325543	3300012203	Vadose Zone Soil	SSIRSQALSQKMLASELRQEAARIAHQNGLRKRGAMFTAQLRGTIMNLSQHN*
Ga0137386_101383883	3300012351	Vadose Zone Soil	ELRQEAARIAHQNGLRKRGAMFTTQLRGFIMNLSQHN*
Ga0137360_102677871	3300012361	Vadose Zone Soil	SQALTQKMLAAELRQEAARIAHQNGLRKRGAMFTTQLRGTIMNLSQHN*
Ga0137373_101117494	3300012532	Vadose Zone Soil	AELRQEAAHIAHQNGFRKRGAAFSTQLRGVIMNLLQHN*
Ga0137419_110451802	3300012925	Vadose Zone Soil	LTQKMLAAELRQEAARIAHQNGLQKRGAMFTTQLRGTIMNLSKHN*
Ga0137407_108761572	3300012930	Vadose Zone Soil	RQEAARLAHRNALRKENANHTTQLRGVLVNLLQHQ*
Ga0126369_123143022	3300012971	Tropical Forest Soil	LRQESARLAHQNTLRKENATNTTQLRGVLVNLLEHQ*
Ga0181521_100950043	3300014158	Bog	LTQKLLAAELRQEAARIAHGNTLRKENATNTTGLRGILVNLLLHQ*
Ga0181530_101170141	3300014159	Bog	QEAARIAHRNTLRKENATNTTQLRGILVNLLQHQ*
Ga0181535_107457981	3300014199	Bog	ITSGIHAQALTQKLLAAELRQEAARIAHRNTLRKENATNTTQLRGVLVNLLQHQ*
Ga0182033_103004473	3300016319	Soil	ELRQEAARMAHRNRLRKENAANTTELRGVLVNLLRHQ
Ga0182032_102567931	3300016357	Soil	TAITSAIHAQALTQKLLAAELRQEAARSAHRNTLRKENAANTTQLRGVLVNLLQHQ
Ga0182034_101461021	3300016371	Soil	LRQEAARIAHRNMHRKENATNTIQLRGVLVNLLQHQ
Ga0182034_119944831	3300016371	Soil	TQKLLAAELRQEAARIAHRNTLRKENAGNTTQLRGVLVNLLQHQ
Ga0182038_116819121	3300016445	Soil	KLLAAELRQEAARIAHRNTLRKENAANTTQLRGVLVNLLQHQ
Ga0187820_12135981	3300017924	Freshwater Sediment	SQALTQKMLAAELRQEAAHIAHQNGFRKRGATFTTQFRTLMMNLLEHN
Ga0187801_101707891	3300017933	Freshwater Sediment	QALTQKMLAAELRQEAAHIAHRNGFRKRGADFSTQLRGVLTNLLQHN
Ga0187819_105046922	3300017943	Freshwater Sediment	LTQKMLAAELRQEAAHIAHQNGFRKRGAAFTTQLRGVIMNLLQHN
Ga0187781_113872312	3300017972	Tropical Peatland	AELRQEAARIAHRNTLRKENATNTTELRAVLVNLLQHQ
Ga0187777_100888371	3300017974	Tropical Peatland	TASSIRSQALTQKMLAAELRQEAAKMAHGNELRKRGATFTLQLRGVLINLLQHN
Ga0187816_104085502	3300017995	Freshwater Sediment	SGIHSQALTQKMLAAELRQEAARLAHRNTLRKENATNTTQLRGVLVNLLQHQ
Ga0187878_13533831	3300018005	Peatland	QALTQKLLAAELRQEAARIAHRNTLRKESATNTTELRGVLVNLLVHQ
Ga0187810_101439561	3300018012	Freshwater Sediment	TSSCIRSQALTQKMLAAELRQEAARIAHQNGLRKRGAMFTTQLRGFIMNLSQHN
Ga0187860_12187071	3300018014	Peatland	AQALTQKLLAAELRQEAARIAHRNTLRKENATNTTELRGVLVNLLVHQ
Ga0187867_106293972	3300018033	Peatland	ALTQKLLAAELRQEAARIAHRNTLRKENATNTTELRGVLVNLLLHQ
Ga0187875_101355013	3300018035	Peatland	AQALTQKLLAAELRQEAARMAHRNTLRKENATNTTTLRGVLVNLLQHQ
Ga0187883_102467681	3300018037	Peatland	AAELRQEAARIAHRNTLRKENATNTTELRGVLVNLLLHQ
Ga0187887_101747213	3300018043	Peatland	SGIHAQALTQKLLAAELRQEAARLAHRNTLRKENATNTTQLRGVLVNLLQHQ
Ga0187890_105440391	3300018044	Peatland	SSSIHAQALTQKLLAAELRQEAARIAHRNTLRKESATNTTELRGVLVNLLLHQ
Ga0187769_114530612	3300018086	Tropical Peatland	AELRQEAAHIAHRNGFRKRGADFSTQLRGVLTNLLQHN
Ga0187852_12056711	3300019082	Peatland	RQEAARIAHRNTLRKENAANTTELRGVLVNLLLHQ
Ga0210384_101343861	3300021432	Soil	IQDLLRIAHQNGLRKRGAMFTTQLRGTIMNLSKHN
Ga0126371_100197721	3300021560	Tropical Forest Soil	KMVAAELRQEAARLAHENTLRKENASNTTQLRGVLVNLLQHQ
Ga0208587_10635391	3300025484	Arctic Peat Soil	GIHAQALTQKLLAAELRQEAARLAHRNTLRKENATNTTQLRGVLVNLLQHQ
Ga0207927_10823282	3300025579	Arctic Peat Soil	AQALTQKLLAAELRQEAARIAHRNTLRKENATNTTQLRGVLVNLLQHQ
Ga0207663_103081741	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	LRQEAARIAHQNGFRKRGATFTTQFRALMMNLLQHN
Ga0207700_102683801	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	RSQALTQKMLAAELRQEAARIAHQNGLRKRGVMFTTQLRGTIMNLSQHN
Ga0207760_1194492	3300026845	Tropical Forest Soil	RQEAARIAHRNTLRKENAGNTTQLRGVLVNLLQHQ
Ga0207758_10159341	3300026895	Tropical Forest Soil	QALTQKLLAAELRQEAARIAHRNTLRKENATNTTQLRGVLVNLLQHQ
Ga0207857_10437841	3300027019	Tropical Forest Soil	AELRQEAAHLAHRNTLRKENATNTTQLRGVLVNLLQHQ
Ga0209418_10023544	3300027371	Forest Soil	LTQKMLAAELRQEAAHIAHQNGFRKRGATFTTQFRTLMMNLLQHN
Ga0207761_10700232	3300027516	Tropical Forest Soil	TSGIHAQALTQKLLAAELRQEAARIAHRNTLRKENAANTTQLRGVLVNLLQHQ
Ga0207826_11089861	3300027680	Tropical Forest Soil	LRQEAARLAHRNTLRKENATNMTQLRGVLVNLLQHQ
Ga0207862_10229781	3300027703	Tropical Forest Soil	LRQEAARIAHRNTLRKENAGNTTQLRGVLVNLLQHQ
Ga0209039_101831822	3300027825	Bog Forest Soil	TSAIHAQALTQKLLAAELRQEAARIAHRNTLRKENATNTTQLRGILVNLLQHQ
Ga0209039_101887871	3300027825	Bog Forest Soil	TSGIHAQALTQKLLAAELRQEAARIAHRNTLRKENSNNTTQLRGVLVNLLQHQ
Ga0209698_109495771	3300027911	Watersheds	ELRQEAAHIAHHNGFRKRGAEFTTGLRGVITNLLQHN
Ga0209069_100446153	3300027915	Watersheds	RSQALTQKMLAAELRQEAARIAHQNGLRKRGAMFTTQLRGTIMNLSKHN
Ga0302160_101162481	3300028665	Fen	QKLLAAELRQEAARIAHRNTLRKENATNTTQLRGVLVNLLQHQ
Ga0302169_100830452	3300028679	Fen	TSGIHAQALTQKLLAAELRQEAARIAHRNTLRKENATNTTQLRGVLVNLLQHQ
Ga0302163_100270771	3300028868	Fen	ELRQEAARIAHRNTLRKENATNTTQLRGVLVNLLQHQ
Ga0302197_102207691	3300028873	Bog	RQEAARIAHRNTLRKENATNTTELRGVLVNLLLHQ
Ga0247275_11065691	3300029817	Soil	GIHAQALTQKLLAAELRQEAARIAHRNTLRKESATNTTTLRGVLVNLLQHQ
Ga0311341_105678581	3300029908	Bog	LTQKLLAAELRQEAARIAHRNTLRKENAANTTELRGVLVNLLLHQ
Ga0311350_113912321	3300030002	Fen	ITSGIHAQALTQKLLAAELRQEAARIAHRNTLRKENATNTTQLRGVLVNLLQHQ
Ga0302306_102931671	3300030043	Palsa	ELRQEAARIAHRNTLRKENATNTTELRGVLVNLLQHQ
Ga0311345_103195993	3300030688	Bog	LLAAELRQEAARIAHRNTLRKENATNTTELRGVLVNLLLHQ
Ga0311335_101546191	3300030838	Fen	AAELRQEAARIAHRNTLRKENATNTTQLRGVLVNLLQHQ
Ga0170824_1125419012	3300031231	Forest Soil	PELRQEAARIAHQNGLRKRGAMFTTQLRGTIMNLSQHN
Ga0318560_105573612	3300031682	Soil	SAIHAQALTQKLLAAELRQEAARLAHRNTLRKENATNTTQLRGVLVNLLQHQ
Ga0310686_1152060961	3300031708	Soil	SSSIRSQALTQKMLAAELRQEAARIAHQNGLRKRGAMFTTQLRGFIMNLSQHN
Ga0307476_104082682	3300031715	Hardwood Forest Soil	AAEMRQEAAHIAHQNGFRKRGATFTTQFRTLMMNLLQHN
Ga0307476_113474072	3300031715	Hardwood Forest Soil	AVASSIRSQALTQKLLAAELRQEAAHIAHQNGFRKRGATFTTQFRTLMMNLLQHN
Ga0318502_105270912	3300031747	Soil	IRSQALTQKMLAAELRQEAAKMAHGNDLRKRGATFTLQLRGVLINWLQHN
Ga0307473_103104252	3300031820	Hardwood Forest Soil	IRSQALTQKMLAAELRQEAAHIAHQNGFRKRGATFTTQFRTLMMSLLQHN
Ga0307478_1000228618	3300031823	Hardwood Forest Soil	LRQEAAHIAHQNGFRKRGATFTTQFRTLMMNLLQHN
Ga0306925_100564411	3300031890	Soil	KLLAAELRQEAARIAHRNTLRKENAGNTTQLRGVLVNLLQHQ
Ga0306925_100613061	3300031890	Soil	TQKMLAAELRQEAAKMAHGNDLRKRGATFTLQLRGVLINWLQHN
Ga0306921_115087402	3300031912	Soil	QKLLAAELRQEAARIAHRNALRKGNASYTTQLRGVLVNLLQHQ
Ga0310912_106511021	3300031941	Soil	AELRQEAARLAHRNTLRKENAANTTQLRGVLVNLLQHQ
Ga0310916_108135392	3300031942	Soil	AAELRQEAARIAHRNTLRKENAGNTTQLRGVLVNLLQHQ
Ga0310913_104945361	3300031945	Soil	TTSAIQAQAVAQKLLAAELRQEAARIAHRNMHRKENATNTIQLRGVLVNLLQHQ
Ga0310913_111174222	3300031945	Soil	QALTQKLLAAELRQEAARIAHRNALRKGNASYTTQLRGVLVNLLQHQ
Ga0310910_115278951	3300031946	Soil	IHSQALTQKMLAAELRQEAARLAHRNMLRKENATNTTELRGVLVNLLQHQ
Ga0307479_108002062	3300031962	Hardwood Forest Soil	RSQALTQKMLAAELRQEAARIAHQNGLRKRGAMFTTQLRGFIMNLSQHN
Ga0310911_107077302	3300032035	Soil	ALAQKMLAAELRQEAAKMAHGNDLRKRGATFTLQLRGVLINWLQHN
Ga0311301_118352702	3300032160	Peatlands Soil	AITSGIHAQALTQKLLAAELRQEAARIAHRNTLRKENANNTTTLRGVLVNLLQHQ
Ga0335085_106827273	3300032770	Soil	LAAEMRQEAAHIAHQNGFRKRGATFTTQFRTLMMNLLEHN
Ga0335085_111251321	3300032770	Soil	LAAELRQEAARIAHRNTLRKDNATNTTQLRGVLVNLLQHQ
Ga0335079_106680831	3300032783	Soil	KMLAAELRQEAARLAHQNTLRKDNATNTTQLRGVLVNLLQHQ
Ga0335078_113186522	3300032805	Soil	SIRSQALTQKMLAAELRQEAAHIAHQNGFRKRGAAFTTQLRGVLTNLLQHN
Ga0335080_111335822	3300032828	Soil	AAELRHEAAHIAHQNGFRKRGAAFSTQLRGVLMNLLQHN
Ga0335080_123407102	3300032828	Soil	LRQEAAHIAHQNGFRKRGAAFSTQLRGVIMNLLQHN
Ga0335070_113493632	3300032829	Soil	ALMQKMLAAELRQEAAQLAHRNTLRKENAANTTQLRGILVNLLQRQ
Ga0335081_118600161	3300032892	Soil	ALTQKMLAAELRHEAAHIAHQNGFRKRGAAFSTQLRGVLMNLLQHN
Ga0335083_100853541	3300032954	Soil	TASAVASSIRSQALTQKMLAAELRHEAAHIAHQNGFRKRGAAFSTQLRGVLMNLLQHN
Ga0335077_115591891	3300033158	Soil	QKMLAAELRQEAAHIAHQNGFRKRGAAFSTQLRGVIMNLLQHN
Ga0310914_116105222	3300033289	Soil	QALTQRMLAAELRQEAAYLAHRNTLLKENANNTNLLRAVLVNLLQHQ
Ga0314863_116179_28_153	3300033804	Peatland	MLAAELRQEAAHIAHRNGFRKRGADFSTQFRGILTNLLQHN
Ga0334828_038512_3_137	3300033822	Soil	TQKLLAAELRQEAARIAHRNTLRKENATNTTELRGVLVNLLLHQ
Ga0371488_0190415_59_184	3300033983	Peat Soil	MLAAELRQEAAHIAHDNGFRKRGAEFTTGLRGVITNLLQHN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F068739

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences