NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F068709

Metagenome / Metatranscriptome Family F068709

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F068709
Family Type Metagenome / Metatranscriptome
Number of Sequences 124
Average Sequence Length 75 residues
Representative Sequence MASKNKLLVALLAVAVAAAFGLADNASAAKKLTYEQAYAKCKSIMDKEGTPGTSTQSNVRYTRGAACMKKYGYKL
Number of Associated Samples 101
Number of Associated Scaffolds 124

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 82.20 %
% of genes near scaffold ends (potentially truncated) 22.58 %
% of genes from short scaffolds (< 2000 bps) 84.68 %
Associated GOLD sequencing projects 93
AlphaFold2 3D model prediction Yes
3D model pTM-score0.38

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (65.323 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(9.677 % of family members)
Environment Ontology (ENVO) Unclassified
(24.194 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(37.097 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 52.43%    β-sheet: 0.00%    Coil/Unstructured: 47.57%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.38
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 124 Family Scaffolds
PF00583Acetyltransf_1 15.32
PF07681DoxX 9.68
PF03976PPK2 4.84
PF04392ABC_sub_bind 3.23
PF00484Pro_CA 3.23
PF00293NUDIX 2.42
PF00857Isochorismatase 2.42
PF07080DUF1348 1.61
PF01988VIT1 1.61
PF13302Acetyltransf_3 1.61
PF13561adh_short_C2 1.61
PF12833HTH_18 0.81
PF13343SBP_bac_6 0.81
PF13531SBP_bac_11 0.81
PF13533Biotin_lipoyl_2 0.81
PF00871Acetate_kinase 0.81
PF13416SBP_bac_8 0.81
PF13185GAF_2 0.81
PF01740STAS 0.81
PF05661DUF808 0.81
PF16576HlyD_D23 0.81
PF01546Peptidase_M20 0.81
PF08332CaMKII_AD 0.81
PF04879Molybdop_Fe4S4 0.81
PF13474SnoaL_3 0.81
PF13392HNH_3 0.81
PF01144CoA_trans 0.81

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 124 Family Scaffolds
COG4270Uncharacterized membrane proteinFunction unknown [S] 9.68
COG2259Uncharacterized membrane protein YphA, DoxX/SURF4 familyFunction unknown [S] 9.68
COG2326Polyphosphate kinase 2, PPK2 familyEnergy production and conversion [C] 4.84
COG0288Carbonic anhydraseInorganic ion transport and metabolism [P] 3.23
COG2984ABC-type uncharacterized transport system, periplasmic componentGeneral function prediction only [R] 3.23
COG1535Isochorismate hydrolaseSecondary metabolites biosynthesis, transport and catabolism [Q] 2.42
COG1335Nicotinamidase-related amidaseCoenzyme transport and metabolism [H] 2.42
COG1814Predicted Fe2+/Mn2+ transporter, VIT1/CCC1 familyInorganic ion transport and metabolism [P] 1.61
COG1633Rubrerythrin, includes spore coat protein YhjRInorganic ion transport and metabolism [P] 1.61
COG3558Uncharacterized conserved protein, nuclear transport factor 2 (NTF2) superfamilyFunction unknown [S] 1.61
COG1788Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunitLipid transport and metabolism [I] 0.81
COG2057Acyl-CoA:acetate/3-ketoacid CoA transferase, beta subunitLipid transport and metabolism [I] 0.81
COG2354Membrane protein MutK/YedI, may be involved in DNA repairReplication, recombination and repair [L] 0.81
COG3426Butyrate kinaseEnergy production and conversion [C] 0.81
COG0282Acetate kinaseEnergy production and conversion [C] 0.81
COG4670Acyl CoA:acetate/3-ketoacid CoA transferaseLipid transport and metabolism [I] 0.81
COG4875Protein kinase association domain CaMKII_AD, NTF2-like superfamilyPosttranslational modification, protein turnover, chaperones [O] 0.81


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms65.32 %
UnclassifiedrootN/A34.68 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300004024|Ga0055436_10030896All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1369Open in IMG/M
3300004114|Ga0062593_101574931Not Available712Open in IMG/M
3300004114|Ga0062593_102887904Not Available549Open in IMG/M
3300004156|Ga0062589_100356106All Organisms → cellular organisms → Bacteria → Proteobacteria1164Open in IMG/M
3300004479|Ga0062595_100651908Not Available833Open in IMG/M
3300004479|Ga0062595_101028551All Organisms → cellular organisms → Bacteria711Open in IMG/M
3300005093|Ga0062594_101389765Not Available712Open in IMG/M
3300005163|Ga0066823_10078290Not Available646Open in IMG/M
3300005168|Ga0066809_10076312Not Available789Open in IMG/M
3300005218|Ga0068996_10120626Not Available615Open in IMG/M
3300005332|Ga0066388_108063086Not Available526Open in IMG/M
3300005334|Ga0068869_101247670All Organisms → cellular organisms → Bacteria → Proteobacteria654Open in IMG/M
3300005339|Ga0070660_101689695Not Available539Open in IMG/M
3300005340|Ga0070689_101671648Not Available579Open in IMG/M
3300005353|Ga0070669_100278130All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1340Open in IMG/M
3300005354|Ga0070675_101841664Not Available558Open in IMG/M
3300005439|Ga0070711_100155398All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1729Open in IMG/M
3300005458|Ga0070681_10269544All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1614Open in IMG/M
3300005547|Ga0070693_100144078All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1503Open in IMG/M
3300005615|Ga0070702_100928208All Organisms → cellular organisms → Bacteria → Proteobacteria684Open in IMG/M
3300005764|Ga0066903_102974242All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria918Open in IMG/M
3300005937|Ga0081455_10004998All Organisms → cellular organisms → Bacteria14665Open in IMG/M
3300005937|Ga0081455_10566459Not Available748Open in IMG/M
3300006028|Ga0070717_10643659Not Available962Open in IMG/M
3300006041|Ga0075023_100064240All Organisms → cellular organisms → Bacteria1187Open in IMG/M
3300006042|Ga0075368_10196730All Organisms → cellular organisms → Bacteria852Open in IMG/M
3300006047|Ga0075024_100078057All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1422Open in IMG/M
3300006048|Ga0075363_100305918All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria923Open in IMG/M
3300006048|Ga0075363_100853427Not Available556Open in IMG/M
3300006057|Ga0075026_100014050All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium3494Open in IMG/M
3300006057|Ga0075026_100156494All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1173Open in IMG/M
3300006755|Ga0079222_10007930All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium3693Open in IMG/M
3300006806|Ga0079220_10790734All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria716Open in IMG/M
3300006852|Ga0075433_11028432Not Available717Open in IMG/M
3300006881|Ga0068865_101847777Not Available546Open in IMG/M
3300006954|Ga0079219_10479301All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria862Open in IMG/M
3300009101|Ga0105247_10433097All Organisms → cellular organisms → Bacteria → Proteobacteria944Open in IMG/M
3300009176|Ga0105242_12058805Not Available614Open in IMG/M
3300010046|Ga0126384_11055721All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium742Open in IMG/M
3300010358|Ga0126370_10163228All Organisms → cellular organisms → Bacteria → Proteobacteria1640Open in IMG/M
3300010360|Ga0126372_10901500All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria887Open in IMG/M
3300010373|Ga0134128_10440445All Organisms → cellular organisms → Bacteria1454Open in IMG/M
3300010396|Ga0134126_10126913All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium3112Open in IMG/M
3300010396|Ga0134126_11040668All Organisms → cellular organisms → Bacteria915Open in IMG/M
3300010400|Ga0134122_11742788Not Available652Open in IMG/M
3300012511|Ga0157332_1011708All Organisms → cellular organisms → Bacteria894Open in IMG/M
3300012513|Ga0157326_1039780All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria655Open in IMG/M
3300012951|Ga0164300_11208637Not Available501Open in IMG/M
3300012955|Ga0164298_10423236Not Available868Open in IMG/M
3300012955|Ga0164298_11009490Not Available615Open in IMG/M
3300012957|Ga0164303_11289656Not Available540Open in IMG/M
3300012961|Ga0164302_10015378All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae3158Open in IMG/M
3300012961|Ga0164302_10170216All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1306Open in IMG/M
3300013306|Ga0163162_12401826Not Available606Open in IMG/M
3300014321|Ga0075353_1074270Not Available752Open in IMG/M
3300014324|Ga0075352_1026631All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1249Open in IMG/M
3300015371|Ga0132258_11510829All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium1696Open in IMG/M
3300015371|Ga0132258_11737573All Organisms → cellular organisms → Bacteria → Proteobacteria1573Open in IMG/M
3300015372|Ga0132256_100211841All Organisms → cellular organisms → Bacteria1990Open in IMG/M
3300015372|Ga0132256_100792114All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium1064Open in IMG/M
3300015372|Ga0132256_101248493Not Available856Open in IMG/M
3300015372|Ga0132256_103924163All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales500Open in IMG/M
3300015374|Ga0132255_100358234All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium japonicum2114Open in IMG/M
3300015374|Ga0132255_103705378Not Available650Open in IMG/M
3300017792|Ga0163161_10333207All Organisms → cellular organisms → Bacteria → Proteobacteria1202Open in IMG/M
3300017792|Ga0163161_10725172All Organisms → cellular organisms → Bacteria → Proteobacteria830Open in IMG/M
3300017939|Ga0187775_10044728All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1329Open in IMG/M
3300017939|Ga0187775_10060945All Organisms → cellular organisms → Bacteria1180Open in IMG/M
3300017944|Ga0187786_10109892Not Available942Open in IMG/M
3300017947|Ga0187785_10000446All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales15371Open in IMG/M
3300017947|Ga0187785_10687468All Organisms → cellular organisms → Bacteria → Proteobacteria536Open in IMG/M
3300017959|Ga0187779_10000988All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales18228Open in IMG/M
3300018029|Ga0187787_10084124All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales997Open in IMG/M
3300018032|Ga0187788_10023274All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1986Open in IMG/M
3300018032|Ga0187788_10076635All Organisms → cellular organisms → Bacteria → Proteobacteria1176Open in IMG/M
3300021478|Ga0210402_10737547All Organisms → cellular organisms → Bacteria → Proteobacteria909Open in IMG/M
3300021560|Ga0126371_11781367All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae738Open in IMG/M
3300025560|Ga0210108_1067593Not Available695Open in IMG/M
3300025912|Ga0207707_10528458All Organisms → cellular organisms → Bacteria1004Open in IMG/M
3300025920|Ga0207649_10608504Not Available841Open in IMG/M
3300025922|Ga0207646_10182822All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria1894Open in IMG/M
3300025923|Ga0207681_10190412All Organisms → cellular organisms → Bacteria1569Open in IMG/M
3300025930|Ga0207701_10269526All Organisms → cellular organisms → Bacteria → Proteobacteria1483Open in IMG/M
3300025931|Ga0207644_10625126All Organisms → cellular organisms → Bacteria → Proteobacteria895Open in IMG/M
3300025933|Ga0207706_10086024All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria2763Open in IMG/M
3300025960|Ga0207651_11111624Not Available708Open in IMG/M
3300025961|Ga0207712_10740932All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria860Open in IMG/M
3300026067|Ga0207678_10473172All Organisms → cellular organisms → Bacteria → Proteobacteria1091Open in IMG/M
3300026319|Ga0209647_1202518All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria690Open in IMG/M
3300026344|Ga0256800_1001197All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium1048Open in IMG/M
3300027866|Ga0209813_10235893All Organisms → cellular organisms → Bacteria690Open in IMG/M
3300027894|Ga0209068_10046195All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales2199Open in IMG/M
3300027907|Ga0207428_10123146All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1987Open in IMG/M
3300027910|Ga0209583_10033605All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1719Open in IMG/M
3300027915|Ga0209069_10060637All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1787Open in IMG/M
3300030916|Ga0075386_11059628All Organisms → cellular organisms → Bacteria994Open in IMG/M
3300031057|Ga0170834_100950568All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1869Open in IMG/M
3300031122|Ga0170822_16857517All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae1251Open in IMG/M
3300031455|Ga0307505_10509982Not Available580Open in IMG/M
3300031820|Ga0307473_10055140All Organisms → cellular organisms → Bacteria → Proteobacteria1908Open in IMG/M
3300031913|Ga0310891_10321460All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria550Open in IMG/M
3300031944|Ga0310884_10607806Not Available654Open in IMG/M
3300032000|Ga0310903_10136091All Organisms → cellular organisms → Bacteria → Proteobacteria1092Open in IMG/M
3300032003|Ga0310897_10369981Not Available672Open in IMG/M
3300032174|Ga0307470_10303790All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1084Open in IMG/M
3300032770|Ga0335085_11826958All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria622Open in IMG/M
3300032828|Ga0335080_10006813All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales11818Open in IMG/M
3300033004|Ga0335084_10077536All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3445Open in IMG/M
3300033412|Ga0310810_10116885All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales3154Open in IMG/M
3300033412|Ga0310810_11135890Not Available644Open in IMG/M
3300033433|Ga0326726_10191689Not Available1883Open in IMG/M
3300033433|Ga0326726_10745358All Organisms → cellular organisms → Bacteria946Open in IMG/M
3300033433|Ga0326726_10820503All Organisms → cellular organisms → Bacteria900Open in IMG/M
3300033433|Ga0326726_11456836All Organisms → cellular organisms → Bacteria → Proteobacteria666Open in IMG/M
3300033810|Ga0314872_002209All Organisms → cellular organisms → Bacteria → Proteobacteria1060Open in IMG/M
3300034090|Ga0326723_0044647All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales1867Open in IMG/M
3300034090|Ga0326723_0162289Not Available984Open in IMG/M
3300034090|Ga0326723_0514068Not Available550Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil9.68%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland7.26%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds5.65%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil5.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil4.84%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.03%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil3.23%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil3.23%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil3.23%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere3.23%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere3.23%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.23%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere3.23%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere3.23%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere3.23%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands2.42%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil2.42%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil2.42%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.42%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere2.42%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil1.61%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.61%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.61%
Natural And Restored WetlandsEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands1.61%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.61%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.61%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere1.61%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.61%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere1.61%
SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment0.81%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.81%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.81%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.81%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland0.81%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere0.81%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.81%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300004024Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005163Soil and rhizosphere microbial communities from Laval, Canada - mgHMBEnvironmentalOpen in IMG/M
3300005168Soil and rhizosphere microbial communities from Laval, Canada - mgLPCEnvironmentalOpen in IMG/M
3300005218Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D2EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005339Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaGHost-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005937Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006041Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014EnvironmentalOpen in IMG/M
3300006042Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3Host-AssociatedOpen in IMG/M
3300006047Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013EnvironmentalOpen in IMG/M
3300006048Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3Host-AssociatedOpen in IMG/M
3300006057Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012EnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006806Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100EnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300012511Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_10EnvironmentalOpen in IMG/M
3300012513Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510Host-AssociatedOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012955Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300014321Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D1EnvironmentalOpen in IMG/M
3300014324Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D1EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300017939Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MGEnvironmentalOpen in IMG/M
3300017944Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MGEnvironmentalOpen in IMG/M
3300017947Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MGEnvironmentalOpen in IMG/M
3300017959Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MGEnvironmentalOpen in IMG/M
3300018029Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MGEnvironmentalOpen in IMG/M
3300018032Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MGEnvironmentalOpen in IMG/M
3300018072Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2EnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300025560Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025931Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025933Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026319Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_60cm (SPAdes)EnvironmentalOpen in IMG/M
3300026344Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 10-16 C5EnvironmentalOpen in IMG/M
3300027866Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes)Host-AssociatedOpen in IMG/M
3300027894Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027910Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)EnvironmentalOpen in IMG/M
3300027915Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300028796Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141EnvironmentalOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300030916Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031122Oak Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031455Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_SEnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031913Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4EnvironmentalOpen in IMG/M
3300031944Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1EnvironmentalOpen in IMG/M
3300032000Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3EnvironmentalOpen in IMG/M
3300032003Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032828Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4EnvironmentalOpen in IMG/M
3300033004Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4EnvironmentalOpen in IMG/M
3300033412Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NCEnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300033810Tropical peat soil microbial communities from peatlands in Loreto, Peru - SR_EEnvironmentalOpen in IMG/M
3300034090Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00NEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0055436_1003089623300004024Natural And Restored WetlandsMMLKNKLLVALLAVTVAAAFGFADNVSAAAKKKLTYEEAWQRCKAFLDKEGTWGTGLQANERYIRGGACMKKYGYKI*
Ga0062593_10157493113300004114SoilMPSKVKIFVMLLAVALIASFAFTGHAVAAKKKLTYEQAYEKCKAILDKEGAPGTTTQSNVRHTRGAGCMKKYGHNL*
Ga0062593_10288790423300004114SoilMPSKLFVTLLAVVFIASVTGYTVAATKKLSYEQAYAKCKAILDKEGSPGTTTQSNVRHTRGAACMKKYGHKL*
Ga0062589_10035610623300004156SoilMPSKIKLFVMLLAVVFTASFALSGYAVAATKKLSYEQAYAKCKAILDKEGSPGTTTQSNVRHTRGAACMKKYGHKL*
Ga0062595_10065190813300004479SoilMTFKNKIIAALLGTALVTAFGVIPDASAAKKISYEEAYKRCKAFLDKEGSPGTGTQANVRYTRGSACMKKFGHKL*
Ga0062595_10102855123300004479SoilFMASFALSGYAVAATKKLSYEQAYAKCKAILDKEGSPGTTTQSNVRHTRGAACMKKYGHKL*
Ga0062594_10138976523300005093SoilMPSKVKLFVMLLAVALTASFAFTGHAVAAKKKLTYEQAYEKCKAILDKEGAPGTTTQSNVRHTRGAGCMKKYGHNL*
Ga0066823_1007829023300005163SoilMTPKNKLLPGILAVAFAAAFGFADSASAAAKKLTYEEAYQKCKAFLDKEGTPGTSTQANVRYTRGSACMKKFGYKL*
Ga0066809_1007631223300005168SoilFAAVLAAALATAFGLADNALAAKKKITYEEAYQRCKAIMDKEGTPGTSTQSNVRYTRGSACMKKYGYKL*
Ga0068996_1012062623300005218Natural And Restored WetlandsMASKNKLLVALLAVAVAAAFGLADNASAAKKLTYEQAYAKCKSIMDKEGTPGTSTQSNVRYTRGAACMKKYGYKL*
Ga0066388_10806308613300005332Tropical Forest SoilMTTRARLFVTLLAGVFALAFGSADNASAAKKKLTYDQAYAKCKSIMDKEGTPGTSTQSNVRYTRGAACMKHYGYKL*
Ga0068869_10124767013300005334Miscanthus RhizosphereMTFKNKIIAALLGTALVTAFGVIPDASAAKKISYEEAYKRCKAFLDKEGSPGTGTQANVRYTRGSACMKKF
Ga0070660_10168969513300005339Corn RhizosphereLKAEHRERAMTFKNKIIAALLGTALVTAFGVIPDASAAKKISYEEAYKRCKAFLDKEGSPGTGTQANVRYTRGSACMKKFGHKL*
Ga0070689_10167164823300005340Switchgrass RhizosphereMTFKNKIIAALLGTALVTAFGVIPDASAAKKISYEEAYKRCKAFLDKEGSPGTGTQANVRYTRGSACMK
Ga0070669_10027813013300005353Switchgrass RhizosphereMPSKVKIFVMLLAVALIASFAFTGHAVAAKKKLTYEQAYEKCKAILDKEGAPGTTTQSNVRHTRGAGCMKKYGHKL*
Ga0070675_10184166423300005354Miscanthus RhizosphereNQRKEIAMPSKIKLFVMLLAVVFMASFALSGYAVAATKKLSYEQAYAKCKAILDKEGSPGTTTQSNVRHTRGAACMKKYGHKL*
Ga0070711_10015539813300005439Corn, Switchgrass And Miscanthus RhizosphereMAFGNRLLTALLAAALVAAFGFTDNESAATKKKLTYDEAYARCKSLLDKEGAWGTSTSANLRYTRGGACMKKYGHRL*
Ga0070681_1026954423300005458Corn RhizosphereMPSKIKLFVMLLAVAFTASFAFTGHAVAAKKKLTYEQAYAKCKAILDKEGTPGTTTQSNVRHSRGAACMKKYGHKL*
Ga0070693_10014407813300005547Corn, Switchgrass And Miscanthus RhizosphereMTFKNKIIAALLGTALVTAFGVIPDASAAKKISYEEAYKRCKAFLDKEGSPGTGTQANVRYTRGSACMKKFGHKLSWLVLRLRDSRGETG*
Ga0070702_10092820813300005615Corn, Switchgrass And Miscanthus RhizosphereMPSKVKLFVMLLAVALTASFAFTGHAVAAKKKLTYEQAYEKCKAILDKEGAPGTTTQSNVRHTR
Ga0066903_10297424223300005764Tropical Forest SoilMTPKARLFVTLVAATFALAVSTADNASAAKKKLTYDQAYAKCKSIMDKEGTPGTSTQSNVRYTRGAACMKHYGYKL*
Ga0081455_1000499853300005937Tabebuia Heterophylla RhizosphereMLNNRVFAMFAAATLAMAFGFANGALAAKKQLTYEQAYAKCKAIMDKQGTYGTSTMANERYTRGAACMKKYGHNL*
Ga0081455_1056645923300005937Tabebuia Heterophylla RhizosphereMLNNRVFAMFAAATLTMAFGFANDALAAKKQLTYEQAYAKCKGVMDKQGTYGTTTMANERYTRGAACMKKYGHNL*
Ga0070717_1064365913300006028Corn, Switchgrass And Miscanthus RhizosphereMTFKNKIIAALLGTALVTAFGVIPDASAAKKISYEEAYKRCKAFLDKEGSPGTGTQANVRYTRGSPCMKKFGHKL*
Ga0075023_10006424033300006041WatershedsMAPKNRIFAAVLAAALATAFGFADDALAAKKKITYEEAYQRCKAIMDKEGTPGTSTQSNVRYTRGSACMKKYGYKL*
Ga0075368_1019673023300006042Populus EndosphereMPSKVKLFVVLLAVGFTASSALSGYAVAATKKLSYEQAYAKCKAILDKEGSPGTTTQSNVRHTRGAACMKKYGHKL*
Ga0075024_10007805723300006047WatershedsMAPKNKIFAAVLAAALATAFGFADDALAAKKKITYEEAYQRCKAIMDKEGTPGTSTQSNVRYTRGSACMKKYGYKL*
Ga0075363_10030591813300006048Populus EndosphereMPSKIKLFVMLLAVVFTASFAFSGYVVAATKKLSYEQAYAKCKAILDKEGSPGTTTQSNVRHTRGAACMKKYGHNL*
Ga0075363_10085342713300006048Populus EndosphereMPSKVKLFVMLLAVAFTASFAFTGHAVAAKKLSYEQAYAKCKAIMDKEGTPGTTTQSNVRHTRGAACMKKYGHKL*
Ga0075026_10001405023300006057WatershedsMAPKNKIFAAVLAAALATAFGFVDNTLAAKKKITYEEAYQRCKAIMDKEGTPGTSTQSNVRYTRGSACMKKYGYKL*
Ga0075026_10015649423300006057WatershedsMSRNKLFIALLAVGVAVTFGFADNASAKKLTYEQAYAKCKSIMDKEGTPGTSTQSNVRYTRGSACMKKYGYRL*
Ga0079222_1000793033300006755Agricultural SoilMSFKNRIFTTFLAGAIAAAFGLTDSASAATKKKLTYDQAYAKCKSIMDKEGTPGTATQSNVRYTRGAACMKKYGHKL*
Ga0079220_1079073413300006806Agricultural SoilMASGNRFLTVHVAGALVAAFGFADSALAAKKKLTYDEAYARCKSLLDKEGAWGTSTNANLRYTRGGACMKKYGHKL*
Ga0075433_1102843213300006852Populus RhizosphereMPSKVKLFVMLLAVAFTASFAFAGHAVAAKKLSYEQAYAKCKAIMDKEGTPGTTTQSNVRHTRGAACMKKYGHKL*
Ga0068865_10184777723300006881Miscanthus RhizosphereLAVVFTASFALSGYAVAATKKLSYEQAYAKCKAILDKEGSPGTTTQSNVRHTRGAACMKKYGHKL*
Ga0079219_1047930123300006954Agricultural SoilMASGNRFLTVLVAGALVAAFGFADSALAAKKKLTYDEAYARCKSLLDKEGAWGTSTNANLRYTRGGACMKKYGHKL*
Ga0111539_1019894333300009094Populus RhizosphereMMTFRRKILVALMAITMPLVFGFADETLAASKKKLTYEQAYAKCKAILDKEGTPGTTTQSNVRHTRGAACMKKYGHNL*
Ga0105247_1043309713300009101Switchgrass RhizosphereMTFKNKIIAALLGTALVTAFGVIPDASAAKKISYEEAYKRCKAFLDKEGSPGTGTQANVRYTRGSACMKKFGHKP*
Ga0111538_1083491813300009156Populus RhizosphereVPVEEERRDPSQFLNEENMMTIRRKILVALMAITMPLVFGFADETLAASKKKLTYEQAYAKCKAILDKEGTPGTTTQSNVRHTRGAACMKKYGHNL*
Ga0105242_1205880513300009176Miscanthus RhizosphereGLNFKSINQREEISMPSKVKLFVMLLAVALTASFAFTGHAVAAKKKLTYEQAYEKCKAILDKEGAPGTTTQSNVRHTRGAGCMKKYGHNL*
Ga0126384_1105572113300010046Tropical Forest SoilMTPKARLFVTLVAAAFALAVSTADNASAAKKKLTYDQAYAKCKSIMDKEGTPGTSTQSNVRYTRGAACMKHYGYKL*
Ga0126370_1016322823300010358Tropical Forest SoilMTPKARLFVTLLAATFALAVSTADNASAAKKKLTYDQAYAKCKSIMDKEGTPGTSTQSNVRYTRGAACMKHYGYKL*
Ga0126372_1090150023300010360Tropical Forest SoilMTPKARLFVTLLAGVFALAFGSADNASAAKKKLTYDQAYAKCKSIMDKEGTPGTSTQSNVRYTRGAACMKHYGYKL*
Ga0134128_1044044523300010373Terrestrial SoilMSVVSKLFAITLELPRSEVTNKREEIAMSSKVKLFVMLLAVVFTASFASSGYAVAATKKLSYEEAYAKCKAILDKEGSPGTTTQSNVRHTRGAACMKKYGHKL*
Ga0134126_1012691343300010396Terrestrial SoilMFLAAALAVAFGLSDGASAAKKKLTYEEAYAKCKSIMDKEGAPGTSTQANVRHTRGAACMKKYGYKL*
Ga0134126_1104066823300010396Terrestrial SoilMAFGNRLLTALLAAALVAAFGFTDNASAATKKKLTYDEAYARCKSLLDKEGAWGTSTSANLRYTRGGACMKKYGHRL*
Ga0134122_1174278813300010400Terrestrial SoilMPSKIKLFVMLLAVVFMASFALSGYAVAATKKLSYEQAYAKCKAILDKEGSPGTTTQSNVRHTRGAACMKKYGHKL*
Ga0157332_101170833300012511SoilFVMLLAVVFTASFALSGYAVATTKKLSYEQAYAKCKAILDREGSPGTTTQSNVRHTRGAACMKKYGHKL*
Ga0157326_103978023300012513Arabidopsis RhizosphereMPSKIKLFVMLLAVVFTASFALSGDAVAATKKLSYEQAYAKCKAILDKEGSPGTTTQSNVRHTRGAACMKKYGHKL*
Ga0164300_1120863723300012951SoilMASKNKLFVAFLTVALAAAFGFANNASAATKKKLTYDQAYAKCKSILDKEGTPGTSTQSNVRYTRGAACMKKYGHKL*
Ga0164298_1042323613300012955SoilVMLLAVAFTTSFAFTGHSVAETKKLTYEQAYAKCKAILDKEGSPGTTTQSNVRHTRGAACMKKYGHKL*
Ga0164298_1100949013300012955SoilLFVAFLTVALAAAFGFANNASAATKKKLTYDQAYAKCKSILDKEGTPGTSTQSNVRYTRGAACMKKYGHKL*
Ga0164303_1128965623300012957SoilMPSKIKLFVMLLAVAFTASFAFTGHAVAAKKKLTYEQAYEKCKAILDKEGTPGTTTQSNVRHSRGAACMKKYGHKL*
Ga0164302_1001537843300012961SoilMTFKNKIIAALLGTALVTAFGVIPDASAAKKISYEEAYRRCKAFLDKEGSPGTGTQANVRYTRGSACMKKFGHKL*
Ga0164302_1017021633300012961SoilALAAAFGFANNASAATKKKLTYDQAYAKCKSILDKEGTPGTSTQSNVRYTRGAACMKKYGHKL*
Ga0163162_1240182623300013306Switchgrass RhizosphereMPSKVKLFVMLLAVALTASFAFTGHAVAAKKKLTYEQAYEKCKAILDKEGAPGTTTQSNVRHTRGAGCMKKYGHKL*
Ga0075353_107427023300014321Natural And Restored WetlandsMMASKNKLLVALLAVAVAAAFGLADNASAAKKLTYEQAYAKCKSIMDKEGTPGTSTQSNVRYTRGAACMKKYGYKL*
Ga0075352_102663123300014324Natural And Restored WetlandsMMLKNKLLVALLAVTVAAAFGFADNVSAAAKKKLTYEEAWQRCKAFLDKEGAWGTGLQANERAIRGGACMKKYGYKI*
Ga0132258_1151082943300015371Arabidopsis RhizosphereMPSKVKLFVMLLAVAFTASFAFTGHAVAAKKLSYEQAYAKCKAILDKEGTPGTTTQSNVRHTRGAACMKKYGHKL*
Ga0132258_1173757313300015371Arabidopsis RhizosphereMLHKNRILATTLAAALVAAFGLTDTASAATKKKLTYEQAYAKCKSIMDKEGTPGTSTQSNVRYTRGGACMKKYGYKL*
Ga0132256_10021184133300015372Arabidopsis RhizosphereMSSKVKLFVMVSAVVFAASFVFGPYALAAKKLTYDEAYAKCKSIMDKEGTPGTTTQSNVRHTRGAACMKKYGHKL*
Ga0132256_10079211423300015372Arabidopsis RhizosphereMPSKKFFAMLLAVAFTASFAFTGHSVAATKKLTYEQAYEKCKAILDKEGSPGTTTQSNVRHTRGAACMKKYGHKL*
Ga0132256_10124849313300015372Arabidopsis RhizosphereMPSKVKLFVMLLAVAFTASFAFTGHAVAAKKLSYEQAYAKCKAILDKEGTPGTTTQSNVRHTRGAACMKKYGHKI*
Ga0132256_10392416323300015372Arabidopsis RhizosphereFLTVALAAAFGFANNASAATKKKLTYDQAYAKCKSILDKEGTPGTSTQSNVRYTRGAACMKKYGHKL*
Ga0132255_10035823433300015374Arabidopsis RhizosphereMSSKVKLFVMVSAVVFATSFVFSPYALAAKKLTYDEAYAKCKSIMDKEGTPGTTTQSNVRHTRGAACMKKYGHKL*
Ga0132255_10370537823300015374Arabidopsis RhizosphereAVVFTASFALSGYAVAATKKLSYEQAYAKCKAILDKEGSPGTTTQSNVRHTRGAACMKKYGHKL*
Ga0163161_1033320713300017792Switchgrass RhizosphereMPSKVKLFVMLLAVALTASFAFTGHAVAAKKKLSYEQAYEKCKAILDKEGAPGTTTQSNVRHTRGAGCMKKYGHNL
Ga0163161_1072517213300017792Switchgrass RhizosphereMTFKNKIIAALLGTALVTAFGVIPDASAAKKISYEEAYKRCKAFLDKEGSPGTGTQANVRYTRGSACMKKFGHKL
Ga0187775_1004472823300017939Tropical PeatlandMSFKGILATVLAGTLATAFALTDNASAAAKKKLTYDEAYAKCKSIMDKEGTPGTTTQANVRHTRGAACMKKYGYKL
Ga0187775_1006094533300017939Tropical PeatlandMVHENKLFATLLAATLAGTFCFADSASAAKQKLTYEQAYARCKSIMDKEGTPGTSTQANVRHTRGAACMKKYGYKL
Ga0187786_1010989213300017944Tropical PeatlandMINSFSDKLKEETMVHENKLFATLLAATLAGTFCFADSASAAKQKLTYEQAYARCKSIMDKEGTPGTSTQANVRHTRGAACMKKYGYKL
Ga0187785_10000446123300017947Tropical PeatlandMKSVILSVLLAGVLAAAFGYGDSASAAKKLTYDQAYARCKSILDKEGTPTTTGQSNVRYTRGGACMKKYGYKL
Ga0187785_1068746823300017947Tropical PeatlandATVFALTDNASAATKKKLTYDEAYAKCKSIMDKEGTPGTTTQSNVRYTRGAACMKKYGYR
Ga0187779_10000988133300017959Tropical PeatlandMSFKNGLVATFLAGTLAITLGLTDSASAAKKKLTYEQAYAKCKSIIDKEGTPGTSTQSNVRYTRGAACMKKYGYRL
Ga0187787_1008412423300018029Tropical PeatlandMAFRKKMLPAVVAAVLAVAFGSIDSASAAKKKLTYEQAYARCKSILDKEGTPTTTGQSNVRYTRGGACMKKYGYKL
Ga0187788_1002327423300018032Tropical PeatlandMPKNKLLVALFAVVVAAVFGFADNASAASKKKLTYKEAYAKCKSIMDKEGTPGTSTPSNVRYTRGAAKKYGYKL
Ga0187788_1007663523300018032Tropical PeatlandMSFKGILATVLAGTLATAFALTDNASAATKKKLTYDEAYAKCKSIMDKEGTPGTTTQANVRHTRGAACMKKYGYKL
Ga0184635_1001105543300018072Groundwater SedimentMPFKNRTLAILVAAAAATAFGPIDTASAAKKKLTYDQAYARCKAVMDKAGTPGVGINPNTRYTQGSACMKKYGHRI
Ga0210402_1073754723300021478SoilMTFKNRVFTALLGTGLVAAFGVVADAAAVKKISYEEAYKRCKAVLDKEGSPGTGTQANVRYTRGSACMKKFGHKL
Ga0126371_1178136723300021560Tropical Forest SoilMTPKARLFVTLVAATFALAVSTADNASAAKKKLTYDQAYAKCKSIMDKEGTPGTSTQSNVRYTRGAACMKHYGYKL
Ga0210108_106759313300025560Natural And Restored WetlandsMMLKNKLLVALLAVTVAAAFGFADNVSAAAKKKLTYEEAWQRCKAFLDKEGTWGTGLQANERYIRGGACMKKYGYKI
Ga0207707_1052845823300025912Corn RhizosphereMPSKIKLFVMLLAVAFTASFAFTGHAVAAKKKLTYEQAYAKCKAILDKEGTPGTTTQSNVRHSRGAACMKKYGHKL
Ga0207649_1060850413300025920Corn RhizosphereMPSKVKIFVMLLAVALIASFAFTGHAVAAKKKLTYEQAYEKCKAILDKEGAPGTTTQSNVRHTRGAGCMKKYGHNL
Ga0207646_1018282233300025922Corn, Switchgrass And Miscanthus RhizosphereAALLGTALVTAFGVIPDASAAKKISYEEAYKRCKAFLDKEGSPGTGTQANVRYTRGSACMKKFGHKL
Ga0207681_1019041213300025923Switchgrass RhizosphereMPSKVKLFVMLLAVALTASFAFTGHAVAAKKKLTYEQAYEKCKAILDKEGAPGTTTQSNVRHTRGAGCMKKYGHKL
Ga0207701_1026952623300025930Corn, Switchgrass And Miscanthus RhizosphereMPSKKFFVMLLAVAFTASFAFTGHSVAATKKLSYEQAYAKCKAILDKEGSPGTTTQSNVRHTRGAACMKKYGHKL
Ga0207644_1062512623300025931Switchgrass RhizosphereMTFKNKIIAALLGTALVTAFGVIPDASAAKKISYEEAYKRCKAFLDKEGSPGTGTQANVRYTRGS
Ga0207706_1008602433300025933Corn RhizosphereMPSKVKLFVMLLAVALTASFAFTGHAVAAKKKLTYEQAYEKCKAILDKEGAPGTTTQSNVRHTRGAGCMKKYGHNL
Ga0207651_1111162413300025960Switchgrass RhizosphereQSLKAEHKERAMTFKNKIIAALLGTALVTAFGVIPDASAAKKISYEEAYKRCKAFLDKEGSPGTGTQANVRYTRGSACMKKFGHKL
Ga0207712_1074093213300025961Switchgrass RhizosphereMPSKIKLFVMLLAVVFMASFALSGYAVAATKKLSYEQAYAKCKAILDKEGSPGTTTQSNVRHTRGAACMKKYGHKL
Ga0207678_1047317223300026067Corn RhizosphereMPSKIKLFVMLLAVVFTASFALSGYAVAATKKLSYEQAYAKCKAILDKEGSPGTTTQSNVRHTRGAACMKKYGHKL
Ga0209647_120251823300026319Grasslands SoilMASKNKLLVALLTVTVAGAFVFADNASAAAKKKLTYDEAYAKCKSIMDKEGTPGTSTQANVRYTRGAACMKKYGHKL
Ga0256800_100119723300026344SedimentMASKNKLLVALLAVTVAAAFGLTDNASAAKKLTYEQAYAKCKSIMDKEGTPGTSTQSNVRYTRGAACMKKYGYKL
Ga0209813_1023589323300027866Populus EndosphereMPSKVKLFVVLLAVGFTASSALSGYAVAATKKLSYEQAYAKCKAILDKEGSPGTTTQSNVRHTRGAACMKKYGHKL
Ga0209068_1004619523300027894WatershedsMAPKNRIFAAVLAAALATAFGFADDALAAKKKITYEEAYQRCKAIMDKEGTPGTSTQSNVRYTRGSACMKKYGYKL
Ga0207428_1012314633300027907Populus RhizosphereMPSKVKIFVMLLAVALIASFAFTGHAVAAKKKLTYEQAYEKCKAILDKEGAPGTTTQSNVRHTRGAGCMKKYGHKL
Ga0209583_1003360523300027910WatershedsMAPKNRIFAAVLAAALATAFGFADDALAAKKKITYEEAYQRCKAIMDKEGTPGTSTQSNVRYTRGSACMKKYGYRL
Ga0209069_1006063723300027915WatershedsMAPKNKIFAAVLAAALATAFGFADDALAAKKKITYEEAYQRCKAIMDKEGTPGTSTQSNVRYTRGSACMKKYGYKL
Ga0307287_1007512613300028796SoilRERAMVFRNRILAILVAAAAATAFGPIDTASAAKKKLTYDQAYARCKAVMDKAGTPGVGINPNTRYTQGSACMKKYGYRL
Ga0307503_1034859823300028802SoilMMTSKRKILVALMAIMMPFALSFAGGALAASNKQLTYEEAYAKCKAILDKEGAPGTMTQSNVRHTRGAACMKKYGHKL
Ga0075386_1105962823300030916SoilMTFKNRVFTALLGTALVAAFGVVADAAAVKKISYEEAYNRCKAFLDKEGSPGTGTQANVRYTRGSACMKKFGHKL
Ga0170834_10095056823300031057Forest SoilMTPKNKLLPGILAVAIAAAFGFADSASAAAKKLTYEEAYQKCKAFLDKEGTPGTSTQANVRYTRGSACMKKFGYKL
Ga0170822_1685751723300031122Forest SoilMTFKNKVFTALLGTALVAAFGVIADAAAVKKMSYEEAYKRCKAFLDKEGSPGTGTQANVRYTRGSACMKKFGHKL
Ga0170824_12264711523300031231Forest SoilLVALKAITMPFALSFAGGALAASNKQLTYEEAYAKCKAILDKEGAPGTMTQSNVRHTRGAACMKKYGHKL
Ga0307505_1050998213300031455SoilMTFKNRVFTALLGTALVAAFGVVADAAAVKKISYEEAYKRCKAVLDKEGSPGTGTQANVRYTRGSACMKKFGHKL
Ga0307473_1005514023300031820Hardwood Forest SoilMGFKGRIFVALLPAAFALALVSADNASAAKKKLTYDQAYAKCKAIMDKEGTPGTSTQSNVRYTRGGACMKKYGYRL
Ga0310891_1032146013300031913SoilMPSKIKLFVMLLAVVFTASFALSGYAVAATKKLSYEQAYAKCKAILDKEGSPGTTTQSNVRHT
Ga0310884_1060780613300031944SoilMLLAVVFMASFALSGYAVAATKKLSYEQAYAKCKAILDKEGSPGTTTQSNVRHTRGAACMKKYGHKL
Ga0310903_1013609123300032000SoilMPSKIKLFVMLVAVVFTASFALSGYAVAATKKLSYEQAYAKCKAILDKEGSPGTTTQSNVRHTRGAACMKKYGHKL
Ga0310897_1036998123300032003SoilEVKRRCKTVNQRKEIAMPSKIKLFVMLLAVVFTASFALSGYAVAATKKLSYEQAYAKCKAILDKEGSPGTTTQSNVRHTRGAACMKKYGHKL
Ga0307470_1030379013300032174Hardwood Forest SoilMWRILQQINDGQEKETVMTFKNRVFTALLGTGLVAAFGVVADAAAVKKISYEEAYKRCKAVLDKEGSPGTGTQANVRYTRGSACMKKFGHKL
Ga0335085_1182695823300032770SoilMAPKNKIFAAVLAAALATAFGFADNASAAKKKITYEEAYQRCKAFLDKEGTPGTSTQSNVRYT
Ga0335080_10006813123300032828SoilMLHESKIFATLLAATLAGTFCFADSASAKKKLTYDQAYARCKSVMDKEGTPGTSTQANVRYTRGAACMKKYGYRL
Ga0335084_1007753643300033004SoilMAPKNKIFAAVLAAALATAFGFADNASAAKKKITYEEAYQRCKAFLDKEGTPGTSTQSNVRYTRGSACMKKYGYKL
Ga0310810_1011688553300033412SoilMASKNKLFVAFLTVALAAAFGFANNASAATKKKLTYDQAYAKCKSILDKEGTPGTSTQSNVRYTRGAACMKKYGHKL
Ga0310810_1113589023300033412SoilMPSKLFVTLLAVVFIASVTGYTVAATKKLSYEQAYAKCKAILDKEGSPGTTTQSNVRHTRGAACMKKYGHKL
Ga0326726_1019168943300033433Peat SoilMAPKNKIFATVLAAALVTAFGFADNTLAAKKITYEEAYKRCKAIMDKEGTPGTGTQSNVRYTRGSACMKKYGYKL
Ga0326726_1074535813300033433Peat SoilMAPKNKIFAAVLAAALATAFGFADNALAAKKKITYEEAYQRCKAIMDKEGTPGTSTQSNVRYTRGSACMKKYGYKL
Ga0326726_1082050323300033433Peat SoilMVHKNKFIVAFLAGVLAAAFGFVDNASAAKKKITYEEAYQRCKAILDKEGTPGTSTQSNVRYTRGAACMKKYGHKL
Ga0326726_1145683623300033433Peat SoilKNKLYVALIAVMIAVAFGFADNASAASKKKLTYDEAYAKCKSIMDKEGTPGTSTQSNVRYTRGAACMKKYGYRL
Ga0314872_002209_244_4773300033810PeatlandMPFKNRFLATLLAGALATVFALADNASAATKKKLTYDQAYAKCKSIMDKEGTPGTSTQSNVRYTRGAACMKKYGYRL
Ga0326723_0044647_1648_18663300034090Peat SoilNKIFAAVLAAALATAFSFADNALAAKKKITYEEAYQRCKAIMDKEGTPGTSTQSNVRYTRGSACMKKYGYKL
Ga0326723_0162289_220_4503300034090Peat SoilMVHKNKLIVAFLAVALAAAFGFVDNASAAKKKITYEEAYQRCKAVMDKEGTPGTGTQSNVRYTRGAACMKKYGYKL
Ga0326723_0514068_166_3963300034090Peat SoilMAPKNKIFAAVLAAALATAFGFADNTLAAKKKITYEEAYQRCKAIMDKEGTPGTGTQSNVRYTRGSACMKKYGYKL


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.