Metagenome / Metatranscriptome Family F068708

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F068708
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	65 residues
Representative Sequence	VPKLVWRVKLVAELEPGVTTETEVACLERNEEAGLADLGLRLDEAKQLTAALQAEMVSAQVA
Number of Associated Samples	82
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	77.05 %
% of genes near scaffold ends (potentially truncated)	85.48 %
% of genes from short scaffolds (< 2000 bps)	89.52 %
Associated GOLD sequencing projects	81
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (70.161 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil (23.387 % of family members)
Environment Ontology (ENVO)	Unclassified (24.194 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (36.290 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 26.67% β-sheet: 28.89% Coil/Unstructured: 44.44%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF02371	Transposase_20	2.42
PF13586	DDE_Tnp_1_2	1.61
PF00665	rve	1.61
PF13808	DDE_Tnp_1_assoc	1.61
PF01695	IstB_IS21	0.81
PF03061	4HBT	0.81
PF08448	PAS_4	0.81
PF13823	ADH_N_assoc	0.81
PF13751	DDE_Tnp_1_6	0.81
PF13520	AA_permease_2	0.81
PF01610	DDE_Tnp_ISL3	0.81
PF13683	rve_3	0.81
PF01914	MarC	0.81
PF13676	TIR_2	0.81
PF13340	DUF4096	0.81
PF11379	DUF3182	0.81
PF01047	MarR	0.81
PF01527	HTH_Tnp_1	0.81
PF01051	Rep_3	0.81
PF13737	DDE_Tnp_1_5	0.81
PF01593	Amino_oxidase	0.81
PF13481	AAA_25	0.81
PF00072	Response_reg	0.81
PF00106	adh_short	0.81
PF00496	SBP_bac_5	0.81
PF10415	FumaraseC_C	0.81
PF03734	YkuD	0.81
PF13610	DDE_Tnp_IS240	0.81
PF05598	DUF772	0.81
PF00722	Glyco_hydro_16	0.81
PF03060	NMO	0.81
PF01656	CbiA	0.81
PF13701	DDE_Tnp_1_4	0.81
PF01609	DDE_Tnp_1	0.81
PF13155	Toprim_2	0.81
PF13006	Nterm_IS4	0.81
PF00872	Transposase_mut	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG3547	Transposase	Mobilome: prophages, transposons [X]	2.42
COG4584	Transposase	Mobilome: prophages, transposons [X]	1.61
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	1.61
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	1.61
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	1.61
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.81
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.81
COG5527	Protein involved in initiation of plasmid replication	Mobilome: prophages, transposons [X]	0.81
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.81
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.81
COG3464	Transposase	Mobilome: prophages, transposons [X]	0.81
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.81
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.81
COG0516	IMP dehydrogenase/GMP reductase	Nucleotide transport and metabolism [F]	0.81
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.81
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.81
COG2273	Beta-glucanase, GH16 family	Carbohydrate transport and metabolism [G]	0.81
COG2095	Small neutral amino acid transporter SnatA, MarC family	Amino acid transport and metabolism [E]	0.81
COG2070	NAD(P)H-dependent flavin oxidoreductase YrpB, nitropropane dioxygenase family	General function prediction only [R]	0.81
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.81
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	70.97 %
Unclassified	root	N/A	29.03 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	70.16 %
Unclassified	root	N/A	29.03 %
Viruses	superkingdom	All Organisms → Viruses	0.81 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	70.16 %
Unclassified	root	N/A	29.03 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.81 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	48.39 %
Unclassified	root	N/A	29.03 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.61 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.81 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	41.94 %
Unclassified	root	N/A	29.03 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.81 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.81 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.03 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	17.74 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	8.06 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.81 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.81 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.81 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.03 %
Methylocystaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae	7.26 %
Acetobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	6.45 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	1.61 %
Blastochloridaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Blastochloridaceae	0.81 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	0.81 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.81 %
Beijerinckiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae	0.81 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.81 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.81 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.03 %
Methylocystis	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis	7.26 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	1.61 %
Acidisphaera	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera	1.61 %
Acidiphilium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium	1.61 %
Salipiger	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Salipiger	0.81 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.81 %
Roseomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas	0.81 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.81 %
unclassified Beijerinckiaceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae	0.81 %
Blastochloris	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Blastochloridaceae → Blastochloris	0.81 %
Craurococcus	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Craurococcus	0.81 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.81 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.03 %
Methylocystis rosea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis rosea	7.26 %
unclassified Acidisphaera	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera	1.61 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	1.61 %
Salipiger marinus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Salipiger → Salipiger marinus	0.81 %
environmental samples	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Craurococcus → environmental samples	0.81 %
Roseomonas wenyumeiae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas wenyumeiae	0.81 %
Beijerinckiaceae bacterium RH AL1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium RH AL1	0.81 %
unclassified Acidiphilium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → unclassified Acidiphilium	0.81 %
Acidiphilium angustum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → Acidiphilium angustum	0.81 %
Blastochloris viridis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Blastochloridaceae → Blastochloris → Blastochloris viridis	0.81 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.81 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.81 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.81 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	29.03 %
Methylocystis rosea	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis rosea	7.26 %
Acidisphaera sp. S103	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. S103	1.61 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	1.61 %
uncultured Craurococcus sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Craurococcus → environmental samples → uncultured Craurococcus sp.	0.81 %
Acidiphilium sp. 21-60-14	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → unclassified Acidiphilium → Acidiphilium sp. 21-60-14	0.81 %
Streptomyces scabiei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces scabiei	0.81 %
Salipiger marinus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Salipiger → Salipiger marinus	0.81 %
Roseomonas wenyumeiae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas wenyumeiae	0.81 %
Beijerinckiaceae bacterium RH AL1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium RH AL1	0.81 %
Acidiphilium angustum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → Acidiphilium angustum	0.81 %
Blastochloris viridis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Blastochloridaceae → Blastochloris → Blastochloris viridis	0.81 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.81 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.81 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.81 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2119805009\|FNTS007_GKN1E7E02FTY5V	Not Available	507	Open in IMG/M
2119805009\|FNTS007_GKN1E7E02H14Z6	Not Available	512	Open in IMG/M
3300003579\|Ga0007429J51699_1122569	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300004092\|Ga0062389_103333755	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis rosea	602	Open in IMG/M
3300005439\|Ga0070711_100530117	All Organisms → cellular organisms → Bacteria → Proteobacteria	974	Open in IMG/M
3300005562\|Ga0058697_10368823	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis rosea	704	Open in IMG/M
3300005661\|Ga0058698_10825543	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	581	Open in IMG/M
3300005718\|Ga0068866_10876493	Not Available	630	Open in IMG/M
3300005719\|Ga0068861_100184829	All Organisms → cellular organisms → Bacteria → Proteobacteria	1738	Open in IMG/M
3300006755\|Ga0079222_10071825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1706	Open in IMG/M
3300006755\|Ga0079222_11699585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis rosea	605	Open in IMG/M
3300006954\|Ga0079219_12290598	Not Available	522	Open in IMG/M
3300007004\|Ga0079218_11116999	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	806	Open in IMG/M
3300009098\|Ga0105245_11010070	Not Available	876	Open in IMG/M
3300009148\|Ga0105243_11941003	Not Available	622	Open in IMG/M
3300009789\|Ga0126307_10829503	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300009789\|Ga0126307_11644088	All Organisms → cellular organisms → Bacteria	522	Open in IMG/M
3300009840\|Ga0126313_11764581	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300010036\|Ga0126305_10987915	Not Available	577	Open in IMG/M
3300010037\|Ga0126304_10393967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	924	Open in IMG/M
3300010037\|Ga0126304_10704002	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300010038\|Ga0126315_10347513	Not Available	924	Open in IMG/M
3300010039\|Ga0126309_10076559	Not Available	1670	Open in IMG/M
3300010039\|Ga0126309_10934236	All Organisms → cellular organisms → Bacteria	577	Open in IMG/M
3300010040\|Ga0126308_10156866	All Organisms → cellular organisms → Bacteria	1441	Open in IMG/M
3300010040\|Ga0126308_10490868	Not Available	829	Open in IMG/M
3300010040\|Ga0126308_11052587	Not Available	572	Open in IMG/M
3300010041\|Ga0126312_11139847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Craurococcus → environmental samples → uncultured Craurococcus sp.	573	Open in IMG/M
3300010041\|Ga0126312_11166732	All Organisms → cellular organisms → Bacteria → Proteobacteria	567	Open in IMG/M
3300010042\|Ga0126314_10732914	Not Available	725	Open in IMG/M
3300010042\|Ga0126314_10802256	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300010042\|Ga0126314_10841302	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis rosea	677	Open in IMG/M
3300010044\|Ga0126310_10063508	All Organisms → cellular organisms → Bacteria	2105	Open in IMG/M
3300010044\|Ga0126310_10226460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1247	Open in IMG/M
3300010044\|Ga0126310_10385487	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces scabiei	993	Open in IMG/M
3300010044\|Ga0126310_11270510	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	594	Open in IMG/M
3300010045\|Ga0126311_10595381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	875	Open in IMG/M
3300010045\|Ga0126311_11823342	Not Available	516	Open in IMG/M
3300010166\|Ga0126306_10146626	All Organisms → cellular organisms → Bacteria	1749	Open in IMG/M
3300010166\|Ga0126306_10226134	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1421	Open in IMG/M
3300010166\|Ga0126306_10234971	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	1394	Open in IMG/M
3300010166\|Ga0126306_10397098	All Organisms → Viruses → Predicted Viral	1078	Open in IMG/M
3300010166\|Ga0126306_10779914	All Organisms → cellular organisms → Bacteria	770	Open in IMG/M
3300010166\|Ga0126306_10813557	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	754	Open in IMG/M
3300010339\|Ga0074046_10330448	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	931	Open in IMG/M
3300010339\|Ga0074046_10804898	Not Available	549	Open in IMG/M
3300010341\|Ga0074045_10198575	Not Available	1344	Open in IMG/M
3300010396\|Ga0134126_11605275	All Organisms → cellular organisms → Bacteria	715	Open in IMG/M
3300010403\|Ga0134123_12575290	Not Available	575	Open in IMG/M
3300010937\|Ga0137776_1260840	Not Available	1133	Open in IMG/M
3300012212\|Ga0150985_102810659	Not Available	701	Open in IMG/M
3300012212\|Ga0150985_103975734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → unclassified Acidiphilium → Acidiphilium sp. 21-60-14	1909	Open in IMG/M
3300012212\|Ga0150985_104914790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1649	Open in IMG/M
3300012212\|Ga0150985_105533610	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	589	Open in IMG/M
3300012212\|Ga0150985_106059633	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	537	Open in IMG/M
3300012212\|Ga0150985_110732861	Not Available	635	Open in IMG/M
3300012212\|Ga0150985_122740998	Not Available	573	Open in IMG/M
3300012469\|Ga0150984_101087255	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1225	Open in IMG/M
3300012469\|Ga0150984_108087490	All Organisms → cellular organisms → Bacteria → Proteobacteria	1725	Open in IMG/M
3300012469\|Ga0150984_112590516	Not Available	589	Open in IMG/M
3300013297\|Ga0157378_12545805	All Organisms → cellular organisms → Bacteria	564	Open in IMG/M
3300013306\|Ga0163162_11751181	Not Available	710	Open in IMG/M
3300014326\|Ga0157380_12708377	Not Available	562	Open in IMG/M
3300014487\|Ga0182000_10566839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis rosea	542	Open in IMG/M
3300014497\|Ga0182008_10630345	Not Available	605	Open in IMG/M
3300014497\|Ga0182008_10665630	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300015373\|Ga0132257_101730733	Not Available	802	Open in IMG/M
3300015374\|Ga0132255_106219508	Not Available	505	Open in IMG/M
3300017965\|Ga0190266_10695465	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis rosea	634	Open in IMG/M
3300018433\|Ga0066667_10626366	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	899	Open in IMG/M
3300018465\|Ga0190269_10421401	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	835	Open in IMG/M
3300018465\|Ga0190269_12036948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis rosea	501	Open in IMG/M
3300018466\|Ga0190268_10720595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	737	Open in IMG/M
3300018920\|Ga0190273_11145719	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	656	Open in IMG/M
3300019767\|Ga0190267_11124643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis rosea	567	Open in IMG/M
3300021181\|Ga0210388_10554709	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. S103	1007	Open in IMG/M
3300021377\|Ga0213874_10014370	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2069	Open in IMG/M
3300021377\|Ga0213874_10035893	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1458	Open in IMG/M
3300021384\|Ga0213876_10398069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	732	Open in IMG/M
3300021388\|Ga0213875_10026503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Beijerinckiaceae → unclassified Beijerinckiaceae → Beijerinckiaceae bacterium RH AL1	2758	Open in IMG/M
3300021388\|Ga0213875_10297307	All Organisms → cellular organisms → Bacteria	763	Open in IMG/M
3300021441\|Ga0213871_10183503	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Roseomonas → Roseomonas wenyumeiae	647	Open in IMG/M
3300025927\|Ga0207687_10771383	Not Available	819	Open in IMG/M
3300025945\|Ga0207679_11309051	All Organisms → cellular organisms → Bacteria → Proteobacteria	665	Open in IMG/M
3300025961\|Ga0207712_12090819	Not Available	507	Open in IMG/M
3300026023\|Ga0207677_10433272	Not Available	1123	Open in IMG/M
3300026089\|Ga0207648_11115000	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300027750\|Ga0209461_10052452	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	833	Open in IMG/M
3300029951\|Ga0311371_11565784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	729	Open in IMG/M
3300030007\|Ga0311338_10460091	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1346	Open in IMG/M
3300030514\|Ga0268253_10337004	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	532	Open in IMG/M
3300030523\|Ga0272436_1020455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4793	Open in IMG/M
3300031096\|Ga0308193_1082415	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300031234\|Ga0302325_13044886	Not Available	540	Open in IMG/M
3300031448\|Ga0272438_1081660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1918	Open in IMG/M
3300031449\|Ga0272429_1153046	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae	1095	Open in IMG/M
3300031450\|Ga0272433_10422627	Not Available	578	Open in IMG/M
3300031454\|Ga0272427_1011318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Blastochloridaceae → Blastochloris → Blastochloris viridis	8063	Open in IMG/M
3300031454\|Ga0272427_1048149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2105	Open in IMG/M
3300031472\|Ga0272437_1035558	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4570	Open in IMG/M
3300031472\|Ga0272437_1110285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1806	Open in IMG/M
3300031472\|Ga0272437_1156544	All Organisms → cellular organisms → Bacteria	1324	Open in IMG/M
3300031472\|Ga0272437_1346778	All Organisms → cellular organisms → Bacteria → Proteobacteria	650	Open in IMG/M
3300031472\|Ga0272437_1369332	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300031473\|Ga0272434_1008157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	11554	Open in IMG/M
3300031473\|Ga0272434_1092887	All Organisms → cellular organisms → Bacteria	2148	Open in IMG/M
3300031520\|Ga0272428_1028107	All Organisms → cellular organisms → Bacteria	5365	Open in IMG/M
3300031520\|Ga0272428_1143144	All Organisms → cellular organisms → Bacteria	1329	Open in IMG/M
3300031708\|Ga0310686_100552492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidiphilium → Acidiphilium angustum	1528	Open in IMG/M
3300031715\|Ga0307476_10815055	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Acetobacteraceae → Acidisphaera → unclassified Acidisphaera → Acidisphaera sp. S103	690	Open in IMG/M
3300031939\|Ga0308174_11281567	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	626	Open in IMG/M
3300031995\|Ga0307409_102571294	Not Available	538	Open in IMG/M
3300032162\|Ga0272424_1130618	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1237	Open in IMG/M
3300032162\|Ga0272424_1276439	Not Available	559	Open in IMG/M
3300033168\|Ga0272423_1052486	All Organisms → cellular organisms → Bacteria → Proteobacteria	2772	Open in IMG/M
3300033181\|Ga0272431_10471442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylocystaceae → Methylocystis → Methylocystis rosea	526	Open in IMG/M
3300033988\|Ga0334909_040493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	595	Open in IMG/M
3300034009\|Ga0334944_074625	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300034236\|Ga0334938_039468	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Salipiger → Salipiger marinus	904	Open in IMG/M
3300034236\|Ga0334938_089566	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300034268\|Ga0372943_0796324	Not Available	626	Open in IMG/M
3300034377\|Ga0334931_021168	All Organisms → cellular organisms → Bacteria → Proteobacteria	1351	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.55%
Host-Associated	Host-Associated	31.45%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.94%
Plants	Host-Associated → Plants	31.45%
Aquatic	Environmental → Aquatic	1.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	49.19%
Rock-Dwelling (Endoliths)	Environmental → Terrestrial → Rock-Dwelling (Endoliths)	15.32%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.10%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.10%
Roots	Host-Associated → Plants → Roots	4.03%
Peat	Environmental → Terrestrial → Peat	2.42%
Phylloplane	Host-Associated → Plants → Phylloplane	2.42%
Freshwater	Environmental → Aquatic → Freshwater	0.81%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.81%
Phyllosphere	Host-Associated → Plants → Phyllosphere	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.74%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified	15.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	8.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.06%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.03%
Unclassified	Host-Associated → Plants → Roots → Unclassified	4.03%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.03%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.42%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.42%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified	2.42%
Soil Crust	Environmental → Terrestrial → Soil → Soil Crust	1.61%
Sand	Environmental → Terrestrial → Soil → Sand	1.61%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.81%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	0.81%
Loam	Environmental → Terrestrial → Soil → Loam	0.81%
Phylloplane/Leaf Surface	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	33.06%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified	15.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	8.06%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.06%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.03%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	4.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.03%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.23%
Desert	Environmental → Terrestrial → Soil → Unclassified → Desert	2.42%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.42%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.42%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.42%
Unclassified	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified	2.42%
Unclassified	Environmental → Terrestrial → Soil → Soil Crust → Unclassified	1.61%
Desert	Environmental → Terrestrial → Soil → Sand → Desert	1.61%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.81%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment	0.81%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.81%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.81%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.81%
Unclassified	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	23.39%
Rock	Environmental → Terrestrial → Rock-Dwelling (Endoliths) → Unclassified → Unclassified → Rock	15.32%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.45%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	6.45%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	4.03%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	3.23%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	3.23%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.42%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	2.42%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.42%
Agave	Host-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave	2.42%
Sub-Biocrust Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Sub-Biocrust Soil	1.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.61%
Biocrust	Environmental → Terrestrial → Soil → Soil Crust → Unclassified → Biocrust	1.61%
Soil	Environmental → Terrestrial → Soil → Sand → Desert → Soil	1.61%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.61%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.61%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.81%
Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Sediment → Sediment	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.81%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Desert → Soil	0.81%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.81%
Agave	Host-Associated → Plants → Phyllosphere → Phylloplane/Leaf Surface → Unclassified → Agave	0.81%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2119805009	Soil microbial communities from sample at FACE Site NTS_007 Nevada Test Site	Environmental	Open in IMG/M
3300003579	Grassland soil microbial communities from Hopland, California, USA - Sample H4_Rhizo_45 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005562	Agave microbial communities from Guanajuato, Mexico - As.Ma.e	Host-Associated	Open in IMG/M
3300005661	Agave microbial communities from Guanajuato, Mexico - As.Sf.e	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009789	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28	Environmental	Open in IMG/M
3300009840	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A	Environmental	Open in IMG/M
3300010036	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26	Environmental	Open in IMG/M
3300010037	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25	Environmental	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010042	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105B	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300010937	Fumarole sediment microbial communities, Furnas, Sao Miguel, Azores. Combined Assembly of Gp0156138, Gp0156139	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014487	Bulk soil microbial communities from Mexico - Magueyal (Ma) metaG	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018920	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 IS	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021388	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8	Host-Associated	Open in IMG/M
3300021441	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027750	Agave microbial communities from Guanajuato, Mexico - As.Ma.rz (SPAdes)	Host-Associated	Open in IMG/M
3300029951	III_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030514	Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (v2)	Host-Associated	Open in IMG/M
3300030523	Rock endolithic microbial communities from Victoria Land, Antarctica - Richard Nunatak white sandstone	Environmental	Open in IMG/M
3300031096	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_194 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031234	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2	Environmental	Open in IMG/M
3300031448	Rock endolithic microbial communities from Victoria Land, Antarctica - Knobhead nord	Environmental	Open in IMG/M
3300031449	Rock endolithic microbial communities from Victoria Land, Antarctica - Finger Mt sud	Environmental	Open in IMG/M
3300031450	Rock endolithic microbial communities from Victoria Land, Antarctica - University Valley sud	Environmental	Open in IMG/M
3300031454	Rock endolithic microbial communities from Victoria Land, Antarctica - Siegfried Peak sud	Environmental	Open in IMG/M
3300031472	Rock endolithic microbial communities from Victoria Land, Antarctica - Richard Nunatak red sandstone	Environmental	Open in IMG/M
3300031473	Rock endolithic microbial communities from Victoria Land, Antarctica - Trio Nunatak nord	Environmental	Open in IMG/M
3300031520	Rock endolithic microbial communities from Victoria Land, Antarctica - Finger Mt nord	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031939	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032162	Rock endolithic microbial communities from Victoria Land, Antarctica - Pudding Butte nord	Environmental	Open in IMG/M
3300033168	Rock endolithic microbial communities from Victoria Land, Antarctica - Mt New Zealand sud	Environmental	Open in IMG/M
3300033181	Rock endolithic microbial communities from Victoria Land, Antarctica - Linnaeus Terrace sud	Environmental	Open in IMG/M
3300033988	Soil microbial communities from Mojave Desert, California, United States - 5NOC	Environmental	Open in IMG/M
3300034009	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 40SMS	Environmental	Open in IMG/M
3300034236	Biocrust microbial communities from Mojave Desert, California, United States - 34SMC	Environmental	Open in IMG/M
3300034268	Forest soil microbial communities from Eldorado National Forest, California, USA - SNFC_MG_FRD_1.2	Environmental	Open in IMG/M
3300034377	Sub-biocrust soil microbial communities from Mojave Desert, California, United States - 27HNS	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FNTS007_08141520	2119805009	Soil	VPKLVWRVKLVAELEPGVTTETGVARIERGGEAGLADLGLRLEEVKRLTAALQARIVPAQVAMVGECRRCCAACGRPLA
FNTS007_09858950	2119805009	Soil	VPKLVWRVKLVAELEPGVATETEVVHIERGEEVGLADLGLSLEEAKRLTTALQAEIVTA
Ga0007429J51699_11225692	3300003579	Avena Fatua Rhizosphere	VTKLVWRVKLVTELQAEEPTEVELTCFERDEQVGLADLGLSLAEAKQLTAA
Ga0062389_1033337551	3300004092	Bog Forest Soil	MWRVKLVAEFETGETTEAEVARLERDEQAGLAALGLRLAEAKQLLATIQAQIVPAQVTVAGEHRRTCVACEGELAQ*
Ga0070711_1005301171	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	LVAELRPGVVTETEVARIERDEQANLAELGLRLQEAKQLTAALQAQIVPAQVTVLS
Ga0058697_103688232	3300005562	Agave	AELRPGVMTETEVARIERDEQAGLADLGLRLAETKQITAALQAEIVPAQVALGG*
Ga0058698_108255431	3300005661	Agave	MGLVPKLVWRVRLVAELRPGATTETEIARIERSEEAGPADLGLRLDEAKRLMAALQAEI
Ga0068866_108764931	3300005718	Miscanthus Rhizosphere	VPKLVWRVKLVAELEPGVTTETEVACLERGEEAGLADLGLRLDEAKQLTAALQAEM
Ga0068861_1001848292	3300005719	Switchgrass Rhizosphere	MPKSVCGVKLLAELRPGVTTETEVARIERGEETSLAGLGLRLDEAEQLIAAIQGQ
Ga0079222_100718253	3300006755	Agricultural Soil	VTKLVWRVMVVAELEPGVTTETELARIERDQQVSLAELGLRLDEAKQLTAALQSQLVPAQVAALG
Ga0079222_116995851	3300006755	Agricultural Soil	VKLIAERRPGVTTETELACLERDEQVGLAGLGLTLAEAKRLMAALQAEIVPRR*
Ga0079219_122905981	3300006954	Agricultural Soil	VSKLVWRVKLVAELQAGEPAEVGLARFERDDQAGLADFGLRLAEAKQPTAAVQAETVPA
Ga0079218_111169991	3300007004	Agricultural Soil	VPKLVWRVKLVAELEPGVTEETEVACLQRNEEAGLADLGLRLDEAKQLTAALQAEMVSAQVAVVGERR
Ga0105245_110100702	3300009098	Miscanthus Rhizosphere	VPKLVWRVKLVAELEPGVTTETEVACLERGEEAGLVHLGLRLDEAKQLTAALQAQMVSAQ
Ga0105243_119410031	3300009148	Miscanthus Rhizosphere	LVSKLVWRVKLVAELEPGVTTETEIACLERGEEAGLADLGLRLNEAKQLTAALQA
Ga0126307_108295032	3300009789	Serpentine Soil	VPKLVWRVKLVAELQAGVTTETEVAHIERGEEAGLADLGLRLDEAKQLTAALQAEMVSGQLAVVGERRRWCATCGRP
Ga0126307_116440881	3300009789	Serpentine Soil	VPKLVWRVKLVAELQPGVTTETEVACLERGEEAGLADLGLRLDEAKQLTAALQAEMVS
Ga0126313_117645811	3300009840	Serpentine Soil	VAGVKLVAELRPGVVTETEVAHIERDEQAGLADLGLRLAETKQLTAAV
Ga0126305_109879152	3300010036	Serpentine Soil	LVSKLVWRVKLVAELEPGVTTETEVACLERGEEAGLADLGLRLNEAKQLTAALQAEMVSAQVA
Ga0126304_103939673	3300010037	Serpentine Soil	VPKLVWRVKLVAELQAGVTTETEVACIERGEEASLADLGLRLDEAKQLTAALQAEMVSAQ
Ga0126304_107040021	3300010037	Serpentine Soil	VRLVAELRPGVTTETEVACIERGEAINPAELGLRLDEAKQLTAALQALIVPAQVAIAGERRRACAA
Ga0126315_103475132	3300010038	Serpentine Soil	VPKLVWRVKLVAELEPGVTTETEVARLERGEEAGLADLGLRLNEAKQLTAGG*
Ga0126309_100765591	3300010039	Serpentine Soil	VPKLVWRVKLVAELRPGVTTETEVARLERDKQAALVDLGLRLDEAKQLTAALQVEMVSAQVA
Ga0126309_109342361	3300010039	Serpentine Soil	VPKLVWRVKLVAELEPGVTTETEVARLERGEEAGLADLGLRLNEAKQLTAALQAEMISAQVAAVGELCRSCAA
Ga0126308_101568661	3300010040	Serpentine Soil	VAKLVWRVKLVAELEPGVVTETELARIERDAQAGLAELGLQLDEAKRLTAALQARLVPAQVAASGECRRACEACGRALAS
Ga0126308_104908681	3300010040	Serpentine Soil	LVSKLVWRVKLVAELEPGVTTETEVACLERGEEAGLADLGLRLNEAKQLTAALQAEM
Ga0126308_110525871	3300010040	Serpentine Soil	VPKLVWRVKLVTELEPGVITETEVACLERGEEAGLADLGLRLNEAKQLTAALQA
Ga0126312_111398472	3300010041	Serpentine Soil	VKLVAELQPGVTTETEVACLERGEEAGLADLGLRLAEAKQLTAALQAEMV
Ga0126312_111667322	3300010041	Serpentine Soil	VPKLVWRVKLVAELEPGVATETEVGRFERGEEVGLADLGLRREEAKRLTAALQAQIVPAQVITAGERRRWC
Ga0126314_107329141	3300010042	Serpentine Soil	VPKLVWRVRLVAELRPGVTTETEVACSECGEEINPAELGLRLDEAKQLTAALQARIVPAQVAIAGERCRACEA
Ga0126314_108022561	3300010042	Serpentine Soil	VPKLVWRVKLVAELRPGVTTETEVACLERGEAVGLAELGLRLDEAEQLTAALQAQIVPAQVAVVGERRRWCVACGRGLASKGHYPAKFRSVFGAV
Ga0126314_108413021	3300010042	Serpentine Soil	VPKLVWRVKLVAELEPGVTTETEVARLERGEEAGLADLGLRLNEAKQLTAALQAEMVSAQVAAVGERCRRCATCGRPLASKGYY
Ga0126310_100635082	3300010044	Serpentine Soil	VWRVKLVAELQPGVTTETEVAWIERDEQAGLAELGLRLEEAKQLTAAL
Ga0126310_102264603	3300010044	Serpentine Soil	VPKLVWRVKLVAELEPGVATETEVGRFERGEEVGLADLGLRLEEAKRLTAALQA
Ga0126310_103854871	3300010044	Serpentine Soil	VAKLVWRVKLVAELEPGVTTETEVACLERGEEAGLTDLGLRLDEAKQLTAALQAE
Ga0126310_112705101	3300010044	Serpentine Soil	VKLVAELRPGVMTETEVARMERGAEAGLADLGLRLDEAKQLTAVLQVEMVSAQVAVVGE
Ga0126311_105953811	3300010045	Serpentine Soil	VPKLVWRVRLVAELRPGVTTETEVARLERDEEAGLADLGLRLEEVKRLTAALQAEIVSAQVVTAGERRRWCS
Ga0126311_118233421	3300010045	Serpentine Soil	LVPKLVWRVKLVAELEPGVTTETEVARLERGEEAGLADLGLRLDEAKQLTAALQAQMVSAQVA
Ga0126306_101466264	3300010166	Serpentine Soil	LVSKLVWRVKLVSELEPGVTTETEVARIERGEEASLADRGLRLDEAKRLTATL
Ga0126306_102261341	3300010166	Serpentine Soil	VPKLVWRVKLIAELEPDVATETEVAQFERGEEAGLADLGLRLEEAKRLTAALQAQIVPAQVITAGERRRWCAACGQM
Ga0126306_102349711	3300010166	Serpentine Soil	VRLVAELQAGVTAETEVSRIERCEEAGLADLGLRLDEAKQLTAALQAEMVSAQL
Ga0126306_103970981	3300010166	Serpentine Soil	VPKLVWRVKLVAELEPGVTTETEVARLERGEEAGLADLGLRLNEAKQLTAALQAEMVSAQ
Ga0126306_107799143	3300010166	Serpentine Soil	VWRVKLVAELQPGVTTETEVARIARDEEATLAELGLRLEEAKQLTAALQAQMVPAQVTTLGECPRSCVACGSVL
Ga0126306_108135571	3300010166	Serpentine Soil	VKLVAELQPGVTTETEVACLERGEEAGLADLGLRLDEAKQLTAALQ
Ga0074046_103304482	3300010339	Bog Forest Soil	MVWRVKLVAELEPGLTTEVEIARLERDEQAGLADLGLRLAEAKQLTAALQAEMVPTQV
Ga0074046_108048981	3300010339	Bog Forest Soil	VPGGLVAELQAQVTTEVDVARLEPDEQAGLAELWLRLAEAKQLTAALLAEMVSAQVTKVGERRGLCVACGVSRPTVDWDTS*
Ga0074045_101985753	3300010341	Bog Forest Soil	VPGGLVAELQAQVTTEVEVARLEPDEQAGLAELWLRLAEAKQLTAALLAEMVSAQVT
Ga0134126_116052751	3300010396	Terrestrial Soil	VPKLVWRVKLVAELQAGVTTETKVARIERGEEAGLADLGLRLDEAKQLTAALQAEMVAGQLAVVGERRRGCVTCGRPLASKGYYCATFRS
Ga0134124_101595931	3300010397	Terrestrial Soil	LVAELQPGVTTEAEVVRIERNEGAGLAELRLRLEEAKQLTAAL
Ga0134123_125752901	3300010403	Terrestrial Soil	LVAEQPSGVTIETELACIERDQQAGLADLGLSLAEAKQVTAALQAEIVPAQMTALGECP
Ga0137776_12608402	3300010937	Sediment	LGSRDEGGLVAKLVAERQPGVTTETEVARIERDEEANLAELGLRLKEAKQLTAALQAQMVPA*
Ga0150985_1028106591	3300012212	Avena Fatua Rhizosphere	VKLVAELEPGVTTETEVACLKRGEEAGLADLGLRLDEVKQLTAALQAEMVSAQV
Ga0150985_1039757343	3300012212	Avena Fatua Rhizosphere	VAKQVWRVKLVAELRPGVITETELARIERPKQATLADLGLTLAEAKQLTAALQAEIMPAQMMGRRETP*
Ga0150985_1049147901	3300012212	Avena Fatua Rhizosphere	MGEQGPVAKLVWRVKLVAELEPGVATETEVARFERDEVAGLADLGLRLEEAKRLTAAVQAQIVPAQVTTVGERRRWCAACGQRL
Ga0150985_1055336101	3300012212	Avena Fatua Rhizosphere	MPKLVWRVKLVAELQAGVTTETEVASIERGEEAVLADLGLRLDEAKQLTAALQAE
Ga0150985_1060596332	3300012212	Avena Fatua Rhizosphere	VPKLVWRVKLVAELEPGVTTETEVACLERNEEAGLADLGLRLDEAKQLTAAL
Ga0150985_1107328612	3300012212	Avena Fatua Rhizosphere	VPKRVWRVRLVAELRPGVTTETEVACIERGEAINPAELGLRLDEAKQLTAALQALIVPAQVAIA
Ga0150985_1227409981	3300012212	Avena Fatua Rhizosphere	VVKLRWRVKLVAERPSGVTAETELACIERDQQAGLAELGLSLAEAKHRMAALQAEIVRRK
Ga0150984_1010872551	3300012469	Avena Fatua Rhizosphere	MVWRVKLVAESEPGLTREVETARLERDEQASLADLGLRLAEAKQLTAALQAQMVPAQVIRVGE
Ga0150984_1080874901	3300012469	Avena Fatua Rhizosphere	MVWRVKLVAESEPGLTREVEIARLERDEPASLADLGRRLAEAKQLTAALQAQMVPAQVIRVGELGRSCVACGCALAGKGHYGAT
Ga0150984_1125905161	3300012469	Avena Fatua Rhizosphere	KLVAELQPGVTTETEVARIECDDEASLAELGLRLVEAKQLTAALQAQIVPAQVAMLGACRRFCVACGSVLASKGHYSVRLGVGA*
Ga0150984_1199344681	3300012469	Avena Fatua Rhizosphere	VTTETEVARIERDDEASLAELGLQLAEAKQLTAALQA
Ga0157378_125458052	3300013297	Miscanthus Rhizosphere	VKLVAELQAGVTAETEVARIERGAEAGLADLGLRLDEAKQLTAALQA
Ga0163162_117511811	3300013306	Switchgrass Rhizosphere	VKLVAELEPGVTTETEVARIERGEEAGLADLGLRLNEAKQLTAALQAKM
Ga0157380_127083771	3300014326	Switchgrass Rhizosphere	VAKLVWRVKLVAELEPGVATETEVEQFERDEVVGLADLGLRLEEVKRLTTAIQAQ
Ga0182000_105668391	3300014487	Soil	VAKLVWRVKLVAELEPGVVTETELVRIERDARAGLAELGLRLDEAKRLTAALQAQLVPAQVAALGARRRSCEACGRVLA
Ga0182008_106303451	3300014497	Rhizosphere	VAGELVAERHPGVTTETELACIERDEDVGLAELGLRLDEAKRLTAALQA
Ga0182008_106656302	3300014497	Rhizosphere	VPKLVWRVKLVAELPAGVTTETEVAHIERGEEVGLADLGLRLDEAKQLMAAL*
Ga0132257_1017307331	3300015373	Arabidopsis Rhizosphere	VKLIAELEPGVTTETEVACLERGEEAGLADLGLRLDEAKQLTAALQAEMVSVQVAVVGERRRGC
Ga0132255_1062195081	3300015374	Arabidopsis Rhizosphere	VPKLVWRVKLIAELEPGVTTETEVACLERNEEAGLADLGLRLDEAKQLTAALQAEMVSAQVAVVGERRRWCAACERPLASKGHYCATFR
Ga0190266_106954651	3300017965	Soil	MKLLAELPAGVTTEVEVVRLERDEQAGLADLGLRLAETKRLTAALQAEIVPAQVAAVGGQRRCC
Ga0066667_106263662	3300018433	Grasslands Soil	VKLVAELQAGVTTETEVAHIERGEEAGLADLGLRLDEAKQLTAALQA
Ga0190269_104214011	3300018465	Soil	VAKLVWRVKLVAELQPGVTTETEIARIEHDEEATLAELGLRLEQAKQVTAALQAQMLPAQVTTLGE
Ga0190269_120369481	3300018465	Soil	VAKLVWRVKLVAELEPGLATETEVARFERDEVVGLADLGLRLEEAKRLTAALQAQVVPAQVTTIGERRRWCAACEQRLASKGHYRAT
Ga0190268_107205952	3300018466	Soil	VPKLVWRVKLVAELRPGVMTETQVARIERGAEAGLADLGLRLDEAKQLTAALQAEMVSAQVAVVGERRRGCVACGRLLASKGHNPRRSAPCSTTCRSGSDGCSSA
Ga0190273_111457191	3300018920	Soil	MPNSVWRVKLVAELRPGVTTETEVARIERGEEASLAGLGFRLDEAQQLTAAI
Ga0190267_111246431	3300019767	Soil	VPKLVWRVKLVAELEPGVATETEVARFERGEEVGLADLGLRLEEAKRLTAALQAQIVPAQVITAGERRR
Ga0210388_105547091	3300021181	Soil	VAKLIWRVKLVAEFETGETTEAEVARLERDEQAGLADLGLRLAEAKQLLAAIQAQIVPAQVAVAGEPRRTCGA
Ga0213874_100143701	3300021377	Plant Roots	VAKLVWRVKLVAECEPGVTTETELARIERPEQAALAELGLTLAEAKRLTAALQAEVVPAQMAALSACP
Ga0213874_100358933	3300021377	Plant Roots	PSGVTTETELACIERDQQISLAGLGLSLAEAKQVTAAPQAEMAPAQVAADRPPPSGPR
Ga0213876_103980691	3300021384	Plant Roots	VAKLVWRVKLVAEWHPGVVTETELACIERDADVGVTELGLRLDGAKRLTAALQAEMVPAQMAALGECRGRP
Ga0213875_100265033	3300021388	Plant Roots	VTQLRWRVKLVTERPSGVVIETELACIERDAQISLAELGLRLDEAKRVTKALQAEMVPAQMTALGE
Ga0213875_102973072	3300021388	Plant Roots	VKLVAEQQPGVTTETELACIERDQQVSLAELGLTLAEAKQLTAALQAEIVPAQMTALSACSQACAGCGRRLAAKGHMWAAP
Ga0213871_101835032	3300021441	Rhizosphere	VGPGDEGGPVAKLRWRVKLVAEREPGVTTETELACIERPEQAALAELGLTLAEAKRLTAALQAEMCRRRWR
Ga0207687_107713832	3300025927	Miscanthus Rhizosphere	VPKLVWRVKLVAELEPGVTTETEVACLERGEEAGLVHLGLRLDEAKQLTAALQAQMVSAQVAVVGERRRWCVACG
Ga0207679_113090511	3300025945	Corn Rhizosphere	VPKLVWRVKLVAELEPGVTTETEVACLERGEEAGLADLGLRLNEAKQLTAALQAEMVSAQVT
Ga0207712_120908192	3300025961	Switchgrass Rhizosphere	VPKLVWRVKLVAELEPGVTTETEVACLERGEEAGLVHLGLRLDEAKQLTAALQAQMVSAQVAVVGERRRWYVVCGRPLASKGYDRA
Ga0207677_104332722	3300026023	Miscanthus Rhizosphere	VPKLVWRVKLVAELEPGVTTETEVACLERGEEAGLVHLGLRLDEAKQLTAALQAQM
Ga0207648_111150001	3300026089	Miscanthus Rhizosphere	LVSKLVWRVKLVAELEPGVTTETEVACLERGEEAGLADLGLRLNEAKQLTAALQAQMVSAQVAAVGERCRSCAAC
Ga0209461_100524522	3300027750	Agave	VAKLVWRVKLVAERHPGVTTETELACIERDEDVGLAELGLRLDEAKRLTAALQAQVVPAQMAALGECPGACEA
Ga0311371_115657841	3300029951	Palsa	VPNMVWRVKLVAELEPGLTTEVEIASLERDEQAGLADLGLRLAEAKQLTAALQAEMVPAQVTTVGERRRSCVACGCVLASKGHYTATFRSL
Ga0311338_104600913	3300030007	Palsa	VAELRPGVSTETEVARIERDDRVGLADLALRLAETKRLTAALQAEVVPAQVAAVG
Ga0268253_103370041	3300030514	Agave	VAKLVWRVKLVAERHPGVTTETELACIERDEDVGLAELGLRLDEAKRLTAALQAQVVPAQMAALGECPRACEACG
Ga0272436_10204555	3300030523	Rock	VPKLVWRVKLVAELRPGVTTEAEVARLERDEQAGLAELGLRLDEAKQLTAALQA
Ga0308193_10824151	3300031096	Soil	VPKLVWRVKLVAELQPGVTEETEVACLERGEEAGLADIGLRLDEAKQLTAALQAEMVAGQLAVVGERQR
Ga0302325_130448861	3300031234	Palsa	MAELEAGSTTEVEAARFERYEQAALADLGLRLAEAKQITAALQAEIVPVQVTTADEHRRACGACGGVLASKGHYTATFR
Ga0272438_10816601	3300031448	Rock	VAKLVAERHPGVTTETELACIERDVEVGLADLGLRLDEAKRLTAALQAEMVPAQMAVLRECPRTCLACGRRLASKG
Ga0272429_11530461	3300031449	Rock	VPKLVWRVKLVAELRPGVTTETKVGRIEHEEQAGLAELGLRLAEAKQLTAALQAQIVPAQVAAVGERRRSCVACG
Ga0272433_104226271	3300031450	Rock	VAKLVWRVKLVAEFQAGVTTEVEVGRFERDEQASVADLGLRLGEAKQITAALQAEMVPRQVTVVGERHRLCATCGCVLASKGYYPAT
Ga0272427_10113181	3300031454	Rock	MWRVMLVAELHPGMTTETELACIERDEEVGLADLGLRLDEAKRLTAALQAEMVPAQMAALGECPRACEACGRGLAA
Ga0272427_10481491	3300031454	Rock	VAKLVWRVKLVAKLRPGVTTATEVAQIERDEQAGVAELGLRLDKAKQLTAALQAQIVPAQVAV
Ga0272437_10355583	3300031472	Rock	VAKLKWRVKLVAERHSGVVTETELACIERSEAVGLADLGLRLDEAKRLAAALQVEMVPAQMAALGECSYACEACERRLAAKGRYGGLM
Ga0272437_11102854	3300031472	Rock	VPKLVWRVKLVAELRPGVVTETEVAQIERDEQAGVAELGLRLDEAKQLTAALQAQTVPAQVAVVGERR
Ga0272437_11565441	3300031472	Rock	RPGVTTETEVARIERDEQAGLAELGLRLAEVKQLAAALQAEIESIQNRGVLIGSG
Ga0272437_13467781	3300031472	Rock	VPKLVWRVKLVAELRPGVTTETEVARIKRDEQAGLAELGLRLAEVKQLAAALQAEIVPAQVAVLGERRRACVACGRMLASKGHYGAR
Ga0272437_13693322	3300031472	Rock	VAKLKWRVRLVTERHPGAVTETELACIERDEGIGVADLGLRLDEAKQLTAALQAEMGRGSKRAVYGLH
Ga0272434_10081571	3300031473	Rock	MWRVMLVAELHPGMTTETELACIERDEEVGLADLGLRLDEAKRLTAALQA
Ga0272434_10928871	3300031473	Rock	VAKLKWRVKLVAERHSGVTTETELACIERDEDVGVADLGLRLDEAKRLTAALQAEMVPARRWPP
Ga0272428_10281076	3300031520	Rock	VPKLVWRMKLVAELRPGVTTETEVACIERDEQAGLAELGLRLAEAKQLTAAL
Ga0272428_11431441	3300031520	Rock	VPKLVWRVKLVAELRPGVTTETELACIERDEQAGLAELGLRLDEAKQLTAAL
Ga0310686_1005524921	3300031708	Soil	MVWRVKLVAELELGSPTEVEIACFERDGQAGLVDLGLRLAEAKQLTAALQAEMLPAQVMIAGEHRCT
Ga0307476_108150551	3300031715	Hardwood Forest Soil	LFRLGYVLGSRDEGELVAKLVWRVKLVTELVAGETMEVEVARLERDEQAGLADLGLRLAEAKQLMAAIQAEIVPAQVTVAGEHRRTCAACDGELASKGHYTATFRS
Ga0308174_112815672	3300031939	Soil	VAKLVWWVKLVAEVEPGVATETELACLERDQQVSLAELGLTLAEAKQLTAALQAEIVPAQMTALSQRGACVDIG
Ga0307409_1025712941	3300031995	Rhizosphere	VPKLVWRVKLVAELEPGVTEETEVACLERGEEAGLADLGLRLDEAKQLTAALQAEMVSAQVAVVGER
Ga0272424_11306181	3300032162	Rock	VKLIAELRPGVTTETELARIERDEQAGLAELGLRLAETKQLTAALQAQIV
Ga0272424_12764392	3300032162	Rock	VKLVAERQPGVTTEIELACIERDAQAGLADLGLSLAEAKQLTAALQAEIVPAQVAA
Ga0272423_10524865	3300033168	Rock	VPKLVWRVKLVAELRPGVTTETEVAQIERDEQAGLAELGLRLDEAKQLTAALQAQIVPAQVAVVGERRRSCVAC
Ga0272431_104714421	3300033181	Rock	VPKLVWRVKLVAELRTGVTTECEVACIERDEQAGVAELGLRLAEAKQLTAALQAQIVPAQVAAVGERR
Ga0334909_040493_3_269	3300033988	Soil	VPKLVWRVKLVAELEPGVATETEVGRFERGEEVGLADLGLRLEEAKRLTAALQARIVPAQVTTAGERRRWCAACGQMLASKGHYPATFR
Ga0334944_074625_2_187	3300034009	Sub-Biocrust Soil	VPKLVWRVKLVAELEPGVTTETEVACLERNEEAGLADLGLRLDEAKQLTAALQAEMVSAQVA
Ga0334938_039468_2_142	3300034236	Biocrust	LRNWSPALATETEVGRFERGEEVGLADLGLRLEEAKRLTAALQAQIV
Ga0334938_089566_335_601	3300034236	Biocrust	MGEQGPVPKLVWRVKLVAELEPGVATETEVARFERGEEAGLADLGLRLEEAKRLTAALQAQIVPAQVTTAGERRRWCAACGQMLASKGH
Ga0372943_0796324_3_176	3300034268	Soil	MPKLVWRVKLVAGLQPGVTTETEAARIERDADANLAELGLRLKEAKQLTAALQAQIVP
Ga0334931_021168_1_165	3300034377	Sub-Biocrust Soil	VPKLVWRVKLVAELEPGVATETEVGRFERGEEVGLADLGLRLEEAKRLTAALQAQ

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F068708

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences