Metagenome Family F068654

Basic Information
Family ID	F068654
Family Type	Metagenome
Number of Sequences	124
Average Sequence Length	47 residues
Representative Sequence	TLRVDARNIFNHPTPGDPNLNINSGTFGEINSKTGSRKLQGQIHFQF
Number of Associated Samples	99
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.23 %
% of genes near scaffold ends (potentially truncated)	99.19 %
% of genes from short scaffolds (< 2000 bps)	91.13 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.14

Most Common Taxonomy
Group	Bacteria (95.161 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (16.936 % of family members)
Environment Ontology (ENVO)	Unclassified (30.645 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.806 % of family members)

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 10.67% Coil/Unstructured: 89.33%
Feature Viewer

Powered by Feature Viewer

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF07519	Tannase	8.87
PF00072	Response_reg	3.23
PF00873	ACR_tran	3.23
PF00884	Sulfatase	3.23
PF11578	DUF3237	2.42
PF13531	SBP_bac_11	1.61
PF03992	ABM	1.61
PF13360	PQQ_2	1.61
PF13620	CarboxypepD_reg	1.61
PF07635	PSCyt1	1.61
PF00563	EAL	0.81
PF01844	HNH	0.81
PF01011	PQQ	0.81
PF03848	TehB	0.81
PF01367	5_3_exonuc	0.81
PF00082	Peptidase_S8	0.81
PF12681	Glyoxalase_2	0.81
PF06689	zf-C4_ClpX	0.81
PF13380	CoA_binding_2	0.81
PF13649	Methyltransf_25	0.81
PF05787	DUF839	0.81
PF03602	Cons_hypoth95	0.81
PF03972	MmgE_PrpD	0.81
PF13442	Cytochrome_CBB3	0.81
PF01370	Epimerase	0.81
PF01425	Amidase	0.81
PF00950	ABC-3	0.81
PF13590	DUF4136	0.81
PF13801	Metal_resist	0.81
PF12847	Methyltransf_18	0.81
PF07617	DUF1579	0.81
PF00196	GerE	0.81
PF04199	Cyclase	0.81
PF13432	TPR_16	0.81
PF14294	DUF4372	0.81
PF03551	PadR	0.81
PF13376	OmdA	0.81
PF00355	Rieske	0.81
PF02276	CytoC_RC	0.81
PF03572	Peptidase_S41	0.81
PF12796	Ank_2	0.81
PF13570	PQQ_3	0.81
PF11141	DUF2914	0.81
PF02371	Transposase_20	0.81
PF00266	Aminotran_5	0.81
PF08668	HDOD	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG2079	2-methylcitrate dehydratase PrpD	Carbohydrate transport and metabolism [G]	0.81
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	0.81
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	0.81
COG4606	ABC-type enterochelin transport system, permease component	Inorganic ion transport and metabolism [P]	0.81
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.81
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	0.81
COG3211	Secreted phosphatase, PhoX family	General function prediction only [R]	0.81
COG2890	Methylase of polypeptide chain release factors	Translation, ribosomal structure and biogenesis [J]	0.81
COG2265	tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD family	Translation, ribosomal structure and biogenesis [J]	0.81
COG2242	Precorrin-6B methylase 2	Coenzyme transport and metabolism [H]	0.81
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	0.81
COG0154	Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit or related amidase	Translation, ribosomal structure and biogenesis [J]	0.81
COG1878	Kynurenine formamidase	Amino acid transport and metabolism [E]	0.81
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.81
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.81
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.81
COG1108	ABC-type Mn2+/Zn2+ transport system, permease component	Inorganic ion transport and metabolism [P]	0.81
COG1092	23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI	Translation, ribosomal structure and biogenesis [J]	0.81
COG0793	C-terminal processing protease CtpA/Prc, contains a PDZ domain	Posttranslational modification, protein turnover, chaperones [O]	0.81
COG0742	16S rRNA G966 N2-methylase RsmD	Translation, ribosomal structure and biogenesis [J]	0.81
COG0609	ABC-type Fe3+-siderophore transport system, permease component	Inorganic ion transport and metabolism [P]	0.81
COG0258	5'-3' exonuclease Xni/ExoIX (flap endonuclease)	Replication, recombination and repair [L]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.16 %
Unclassified	root	N/A	4.84 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.16 %
Unclassified	root	N/A	4.84 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.16 %
Unclassified	root	N/A	4.84 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	50.81 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.45 %
Unclassified	root	N/A	4.84 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.61 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.81 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	29.84 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	9.68 %
Unclassified	root	N/A	4.84 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.42 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.81 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.81 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.81 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.81 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.81 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	29.84 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	5.65 %
Unclassified	root	N/A	4.84 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1.61 %
Opitutae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae	0.81 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	0.81 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.81 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.81 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.81 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.81 %
Caulobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	29.84 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.65 %
Unclassified	root	N/A	4.84 %
unclassified Caulobacterales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → unclassified Caulobacterales	0.81 %
Opitutales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales	0.81 %
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	0.81 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	0.81 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	0.81 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.81 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.81 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.81 %
Erythrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae	0.81 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	29.84 %
Unclassified	root	N/A	4.84 %
Terriglobus	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus	0.81 %
Bryobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter	0.81 %
Caulobacterales bacterium 32-69-10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → unclassified Caulobacterales → Caulobacterales bacterium 32-69-10	0.81 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.81 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	0.81 %
Planctomycetaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae	0.81 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.81 %
Opitutaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae	0.81 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.81 %
Erythrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae	0.81 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	29.84 %
Unclassified	root	N/A	4.84 %
Terriglobus saanensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus saanensis	0.81 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.81 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.81 %
unclassified Planctomycetaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae	0.81 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.81 %
Opitutus	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus	0.81 %
Caulobacterales bacterium 32-69-10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → unclassified Caulobacterales → Caulobacterales bacterium 32-69-10	0.81 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.81 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.81 %
Erythrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae	0.81 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	29.84 %
Unclassified	root	N/A	4.84 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	0.81 %
Opitutus terrae	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus → Opitutus terrae	0.81 %
Terriglobus saanensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus saanensis	0.81 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.81 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.81 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.81 %
Caulobacterales bacterium 32-69-10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → unclassified Caulobacterales → Caulobacterales bacterium 32-69-10	0.81 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.81 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.81 %
Erythrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae	0.81 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	29.84 %
Unclassified	root	N/A	4.84 %
Opitutus terrae PB90-1	strain	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus → Opitutus terrae → Opitutus terrae PB90-1	0.81 %
Planctomycetaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	0.81 %
Terriglobus saanensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus saanensis	0.81 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.81 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	0.81 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.81 %
Caulobacterales bacterium 32-69-10	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → unclassified Caulobacterales → Caulobacterales bacterium 32-69-10	0.81 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.81 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.81 %
Erythrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae	0.81 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.81 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.81 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459021\|G14TP7Y01BXE4W	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	566	Open in IMG/M
3300000033\|ICChiseqgaiiDRAFT_c1816594	All Organisms → cellular organisms → Bacteria	704	Open in IMG/M
3300004157\|Ga0062590_100659906	All Organisms → cellular organisms → Bacteria	933	Open in IMG/M
3300004157\|Ga0062590_100866494	All Organisms → cellular organisms → Bacteria	840	Open in IMG/M
3300004463\|Ga0063356_102504056	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	791	Open in IMG/M
3300005172\|Ga0066683_10307900	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	984	Open in IMG/M
3300005172\|Ga0066683_10854562	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	525	Open in IMG/M
3300005175\|Ga0066673_10073836	All Organisms → cellular organisms → Bacteria	1779	Open in IMG/M
3300005181\|Ga0066678_10697537	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	676	Open in IMG/M
3300005181\|Ga0066678_10962392	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300005186\|Ga0066676_10201256	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1280	Open in IMG/M
3300005187\|Ga0066675_10735654	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	742	Open in IMG/M
3300005330\|Ga0070690_100773292	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300005331\|Ga0070670_100014579	All Organisms → cellular organisms → Bacteria → Proteobacteria	6750	Open in IMG/M
3300005331\|Ga0070670_101509410	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300005332\|Ga0066388_106439774	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	592	Open in IMG/M
3300005334\|Ga0068869_100803614	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	808	Open in IMG/M
3300005340\|Ga0070689_101993918	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300005345\|Ga0070692_11147013	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	551	Open in IMG/M
3300005364\|Ga0070673_101062611	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300005367\|Ga0070667_101902431	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300005438\|Ga0070701_11003684	All Organisms → cellular organisms → Bacteria	582	Open in IMG/M
3300005446\|Ga0066686_10201264	All Organisms → cellular organisms → Bacteria	1334	Open in IMG/M
3300005553\|Ga0066695_10283153	All Organisms → cellular organisms → Bacteria	1046	Open in IMG/M
3300005577\|Ga0068857_100610899	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1031	Open in IMG/M
3300005598\|Ga0066706_11097470	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608	Open in IMG/M
3300005598\|Ga0066706_11468003	All Organisms → cellular organisms → Bacteria → Acidobacteria	514	Open in IMG/M
3300005764\|Ga0066903_103930408	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300005834\|Ga0068851_10563820	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae → unclassified Planctomycetaceae → Planctomycetaceae bacterium	689	Open in IMG/M
3300005841\|Ga0068863_102591729	All Organisms → cellular organisms → Bacteria	516	Open in IMG/M
3300005844\|Ga0068862_102031598	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Terriglobus → Terriglobus saanensis	586	Open in IMG/M
3300006031\|Ga0066651_10747114	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	528	Open in IMG/M
3300006031\|Ga0066651_10773594	All Organisms → cellular organisms → Bacteria	519	Open in IMG/M
3300006034\|Ga0066656_10633779	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300006796\|Ga0066665_10021902	All Organisms → cellular organisms → Bacteria	4025	Open in IMG/M
3300006796\|Ga0066665_10455849	All Organisms → cellular organisms → Bacteria	1054	Open in IMG/M
3300006796\|Ga0066665_10755769	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300006800\|Ga0066660_11461068	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300006844\|Ga0075428_102464410	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300006845\|Ga0075421_101005644	All Organisms → cellular organisms → Bacteria	943	Open in IMG/M
3300006865\|Ga0073934_10799788	All Organisms → cellular organisms → Bacteria	537	Open in IMG/M
3300006871\|Ga0075434_100627258	All Organisms → cellular organisms → Bacteria → Proteobacteria	1094	Open in IMG/M
3300006904\|Ga0075424_100629827	All Organisms → cellular organisms → Bacteria	1145	Open in IMG/M
3300007258\|Ga0099793_10445586	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	640	Open in IMG/M
3300009012\|Ga0066710_100631134	All Organisms → cellular organisms → Bacteria	1628	Open in IMG/M
3300009012\|Ga0066710_101032900	All Organisms → cellular organisms → Bacteria	1269	Open in IMG/M
3300009012\|Ga0066710_102366021	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300009012\|Ga0066710_103317975	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	614	Open in IMG/M
3300009094\|Ga0111539_11557695	All Organisms → cellular organisms → Bacteria → Acidobacteria	766	Open in IMG/M
3300009094\|Ga0111539_12383522	Not Available	614	Open in IMG/M
3300009094\|Ga0111539_13290681	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300009137\|Ga0066709_100344648	All Organisms → cellular organisms → Bacteria → Proteobacteria	2044	Open in IMG/M
3300009137\|Ga0066709_102783755	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	649	Open in IMG/M
3300009147\|Ga0114129_11560024	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	810	Open in IMG/M
3300009148\|Ga0105243_12431135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Erythrobacteraceae	562	Open in IMG/M
3300009156\|Ga0111538_12883405	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	602	Open in IMG/M
3300009162\|Ga0075423_10711764	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1060	Open in IMG/M
3300009162\|Ga0075423_12941317	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	522	Open in IMG/M
3300010047\|Ga0126382_10047227	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	2495	Open in IMG/M
3300010047\|Ga0126382_12094117	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	541	Open in IMG/M
3300010333\|Ga0134080_10111786	All Organisms → cellular organisms → Bacteria	1132	Open in IMG/M
3300010333\|Ga0134080_10335625	All Organisms → cellular organisms → Bacteria → Acidobacteria	685	Open in IMG/M
3300010336\|Ga0134071_10374949	All Organisms → cellular organisms → Bacteria	722	Open in IMG/M
3300010337\|Ga0134062_10148416	All Organisms → cellular organisms → Bacteria → Acidobacteria	1041	Open in IMG/M
3300010358\|Ga0126370_11276465	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	687	Open in IMG/M
3300010358\|Ga0126370_11506009	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	640	Open in IMG/M
3300010366\|Ga0126379_10956029	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	960	Open in IMG/M
3300010376\|Ga0126381_104552122	Not Available	535	Open in IMG/M
3300010398\|Ga0126383_11359595	All Organisms → cellular organisms → Bacteria	800	Open in IMG/M
3300010398\|Ga0126383_13218151	All Organisms → cellular organisms → Bacteria → Acidobacteria	533	Open in IMG/M
3300010401\|Ga0134121_11863925	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300011120\|Ga0150983_12230342	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	789	Open in IMG/M
3300011120\|Ga0150983_12819304	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	613	Open in IMG/M
3300011445\|Ga0137427_10026228	All Organisms → cellular organisms → Bacteria	2292	Open in IMG/M
3300012199\|Ga0137383_10405337	All Organisms → cellular organisms → Bacteria → Acidobacteria	999	Open in IMG/M
3300012199\|Ga0137383_10904977	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	644	Open in IMG/M
3300012211\|Ga0137377_11577740	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	581	Open in IMG/M
3300012349\|Ga0137387_11287578	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	512	Open in IMG/M
3300012356\|Ga0137371_11333954	All Organisms → cellular organisms → Bacteria	529	Open in IMG/M
3300012362\|Ga0137361_10084289	All Organisms → cellular organisms → Bacteria → Acidobacteria	2724	Open in IMG/M
3300012908\|Ga0157286_10470013	Not Available	504	Open in IMG/M
3300012909\|Ga0157290_10196417	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300012911\|Ga0157301_10466156	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300012923\|Ga0137359_11473539	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569	Open in IMG/M
3300012971\|Ga0126369_10344161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	1511	Open in IMG/M
3300012976\|Ga0134076_10156868	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300012977\|Ga0134087_10536338	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300013296\|Ga0157374_11805381	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300013297\|Ga0157378_13198004	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	509	Open in IMG/M
3300013308\|Ga0157375_12690989	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300014326\|Ga0157380_10538457	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1143	Open in IMG/M
3300015200\|Ga0173480_10023732	All Organisms → cellular organisms → Bacteria	2589	Open in IMG/M
3300015245\|Ga0137409_10962799	All Organisms → cellular organisms → Bacteria	690	Open in IMG/M
3300015371\|Ga0132258_11684387	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1600	Open in IMG/M
3300015371\|Ga0132258_13140974	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1141	Open in IMG/M
3300015372\|Ga0132256_103729580	Not Available	512	Open in IMG/M
3300015373\|Ga0132257_101872186	Not Available	772	Open in IMG/M
3300015374\|Ga0132255_102460059	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300017659\|Ga0134083_10322626	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	659	Open in IMG/M
3300018431\|Ga0066655_10049915	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2151	Open in IMG/M
3300018431\|Ga0066655_10675539	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	699	Open in IMG/M
3300018433\|Ga0066667_11818934	All Organisms → cellular organisms → Bacteria → Acidobacteria	552	Open in IMG/M
3300018433\|Ga0066667_12083295	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300018433\|Ga0066667_12259479	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300020582\|Ga0210395_11007706	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300025324\|Ga0209640_11379659	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	516	Open in IMG/M
3300025893\|Ga0207682_10096534	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Caulobacterales → unclassified Caulobacterales → Caulobacterales bacterium 32-69-10	1288	Open in IMG/M
3300025903\|Ga0207680_10186046	All Organisms → cellular organisms → Bacteria	1407	Open in IMG/M
3300025918\|Ga0207662_10072838	All Organisms → cellular organisms → Bacteria → Acidobacteria	2083	Open in IMG/M
3300025930\|Ga0207701_11159439	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	638	Open in IMG/M
3300025933\|Ga0207706_11506085	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300025934\|Ga0207686_11216320	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	617	Open in IMG/M
3300025936\|Ga0207670_10943458	All Organisms → cellular organisms → Bacteria → Acidobacteria	724	Open in IMG/M
3300025941\|Ga0207711_10930381	All Organisms → cellular organisms → Bacteria	808	Open in IMG/M
3300025972\|Ga0207668_10178587	Not Available	1672	Open in IMG/M
3300026089\|Ga0207648_11624128	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Opitutae → Opitutales → Opitutaceae → Opitutus → Opitutus terrae → Opitutus terrae PB90-1	607	Open in IMG/M
3300026332\|Ga0209803_1055529	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1733	Open in IMG/M
3300026342\|Ga0209057_1191338	All Organisms → cellular organisms → Bacteria	584	Open in IMG/M
3300026540\|Ga0209376_1367582	All Organisms → cellular organisms → Bacteria	540	Open in IMG/M
3300027835\|Ga0209515_10463081	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300027965\|Ga0209062_1318955	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	517	Open in IMG/M
3300031446\|Ga0170820_11197972	All Organisms → cellular organisms → Bacteria → Acidobacteria	2173	Open in IMG/M
3300031716\|Ga0310813_10055985	All Organisms → cellular organisms → Bacteria → Acidobacteria	2925	Open in IMG/M
3300032205\|Ga0307472_100565631	All Organisms → cellular organisms → Bacteria → Acidobacteria	996	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.55%
Host-Associated	Host-Associated	30.65%
Engineered	Engineered	0.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	66.13%
Plants	Host-Associated → Plants	30.65%
Aquatic	Environmental → Aquatic	2.42%
Solid Waste	Engineered → Solid Waste	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	66.13%
Rhizosphere	Host-Associated → Plants → Rhizosphere	21.77%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.87%
Freshwater	Environmental → Aquatic → Freshwater	0.81%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.81%
Sediment	Environmental → Aquatic → Sediment	0.81%
Grass	Engineered → Solid Waste → Grass	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.45%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.52%
Loam	Environmental → Terrestrial → Soil → Loam	9.68%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.26%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.23%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.81%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	0.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.81%
Composting	Engineered → Solid Waste → Grass → Composting	0.81%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	26.61%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.52%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.26%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.84%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.23%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.23%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.42%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.61%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.81%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	0.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.81%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.81%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.81%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	16.94%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.87%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.87%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	7.26%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	7.26%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	5.65%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.84%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.03%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.23%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.23%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	1.61%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.61%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.61%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.81%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	0.81%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.81%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.81%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.81%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.81%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.81%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.81%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.81%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459021	Litter degradation NP4	Engineered	Open in IMG/M
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006865	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG	Environmental	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012908	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1	Environmental	Open in IMG/M
3300012909	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S149-409B-1	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134 (SPAdes)	Environmental	Open in IMG/M
3300027835	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW60B uncontaminated upgradient, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027965	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen12_06102014_R2 (SPAdes)	Environmental	Open in IMG/M
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.14
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.14
Powered by PDBe Molstar

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F068654

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4NP_03844520	2170459021	Switchgrass, Maize And Mischanthus Litter	LRIDASNILNHPTPGNPNLDINSGTFGEIQTKTGNRTLAGQLRLEF
ICChiseqgaiiDRAFT_18165943	3300000033	Soil	RNLTLRLDAQNVFNHPTPGSPNLNINSGTFGEINSKTGNRSLAGQIRFEF*
Ga0062590_1006599061	3300004157	Soil	FRMTEGTRLTVRIDSNNVFNHPNPGDPNLNINSGTFGEIDSKTGNRSLAGQVKFEF*
Ga0062590_1008664942	3300004157	Soil	DARNLFNHPTPGNPNLNANTGTFGQINTKTGSRTLAGQIRLEF*
Ga0063356_1025040561	3300004463	Arabidopsis Thaliana Rhizosphere	ILNHPTPGNPNLDINSGTFGEITTKTGSRTLSGQLRLEF*
Ga0066683_103079001	3300005172	Soil	DARNIFNHPTPGDPNLNINSLTFGEINSKTGSRKLQGQIHFQF*
Ga0066683_108545622	3300005172	Soil	ESKTLTLRVDARNVFNHPTPGDPNLNMNSDTFGQINSKTGSRKLQGQIHFQF*
Ga0066673_100738364	3300005175	Soil	VFNHPTPGDPNLNMNSGTFGQIDYKTGSRKLQGQIHFQF*
Ga0066678_106975372	3300005181	Soil	ANILKTVKIAESKRLTLRVDAHNLFNHPTPTDPNLNINSGTFGEINSKTGNRTLQG*
Ga0066678_109623921	3300005181	Soil	SNILNHPTPANPNLDINSGTFGEITTKNGSRTLAGQIRFEF*
Ga0066676_102012562	3300005186	Soil	TLRVDARNIFNHPTPGDPNLNINSGTFGEINSKTGSRKLQGQIHFQF*
Ga0066675_107356541	3300005187	Soil	LKTIKIAESKTLTLRVDARNVFNHPTPGDPNLNMNSGTFGEINYKTGSRKLQGQIHFQF*
Ga0070690_1007732921	3300005330	Switchgrass Rhizosphere	DARNIFNHPTPGNPNLNLNSGTFGQIATKTGSRTLAGQIRLEF*
Ga0070670_1000145791	3300005331	Switchgrass Rhizosphere	SLTFRIDARNIFNHPTPGSPNLNINSGTFGEITTKTGSRALAGQIRLEF*
Ga0070670_1015094102	3300005331	Switchgrass Rhizosphere	LTIRVDSNNVFNHPNPGDPNVNINAGTFGEIDSKTGSRSLAAQARFEF*
Ga0066388_1064397741	3300005332	Tropical Forest Soil	NNIFNHPTPGNPNLDINSGNFGEITTKTGSRTLAGQVRLEF*
Ga0068869_1008036142	3300005334	Miscanthus Rhizosphere	KTFRTSESTRLTIRVDSNNVFNHPNPGDPNVNINAGTFGEIDSKTGSRSLAAQARFEF*
Ga0070689_1019939181	3300005340	Switchgrass Rhizosphere	DARNLFNHPTPANPNLNVNTGTFGQINTKTGSRTLAGQIRLEF*
Ga0070692_111470131	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	DESRNLAIRIDARNVLNHPTPGNPNLNLNAGTFGQITTKTGSRTLAAQIRLEF*
Ga0070673_1010626112	3300005364	Switchgrass Rhizosphere	SRSVAIRVDARNIFNHPTPGNPNLNINSGTFGQITTKTGNRALAGQIRLEF*
Ga0070667_1019024311	3300005367	Switchgrass Rhizosphere	NVFNHPNPGDPNLNINSGTFGEIDSKTGNRSLAAQVRLEF*
Ga0070701_110036842	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	ESRSVAVRFDARNLPNHPTPGNPNLNLNTGTFGQISTKNGSRALAGQIRLEF*
Ga0066686_102012642	3300005446	Soil	LTFRIDANNVLNHPTPGAPSLNINSGTFGQITTKTGSRSLQAQLHLDF*
Ga0066695_102831533	3300005553	Soil	RVDARNVFNHPTPSDPNLNINSGTFGEINSKTGNRTLQSQIHFQF*
Ga0068857_1006108993	3300005577	Corn Rhizosphere	RVDSNNVFNHPNPGDPNVNINAGTFGEIDSKTGSRSLAAQARFEF*
Ga0066706_110974703	3300005598	Soil	RSVTLRIDASNILNHPTPGNPNLDINSGTFGEIQTKTGNRTLAAQLHLEF*
Ga0066706_114680031	3300005598	Soil	RIGEGRSVAIRLDARNVLNHPTPGNPNLNINTGTFGQITTKTGSRSIAGQLRLEF*
Ga0066903_1039304081	3300005764	Tropical Forest Soil	AESKTLTLRVDAHNVFNHPTPSDPNLNINSGTFGEINSKTGNRTLQGQIHFQF*
Ga0068851_105638201	3300005834	Corn Rhizosphere	NHPNPVNPSLDLNAGNFGEINNKTGSRSLAAQVRFQF*
Ga0068863_1025917292	3300005841	Switchgrass Rhizosphere	FNHPTPGNPNLDINSGTFGEISTKTGSRTLAGQLRFEF*
Ga0068862_1020315981	3300005844	Switchgrass Rhizosphere	NLQKKIRIAESRSVAIRLDARNLFNHPTPANPNLNINAGTFGQITTKTGSRSLAGQIRVEF*
Ga0066651_107471142	3300006031	Soil	KTIKIAESKTLTLRVDARNVFNHPTPVDPNLNMNSGTFGEINSKIGSRKLQGQIHFQF*
Ga0066651_107735941	3300006031	Soil	DSNNVFNHPNPGNPNMNLNSGTFGPITTKTGNRSLAAQLRFVF*
Ga0066656_106337791	3300006034	Soil	HPTPGNPNLSINAGTFGQITTKTGQRSLQALVRFDF*
Ga0066665_100219026	3300006796	Soil	VDARNLFNHPIPGDPNLNINSGTFGEINSKTGNRRLQGQIHFQF*
Ga0066665_104558492	3300006796	Soil	VRVDASNLFNHPTPGNPNLNINSGTFGEINAKTGFSTLAGQVRLEF*
Ga0066665_107557691	3300006796	Soil	SKNLTLRVDARNLFNHPTPADPNLNMNSDTFGQINSKTGNRTLQGQIHFQF*
Ga0066660_114610681	3300006800	Soil	ILKTVKIAESKNLTLRVDARNLFNHPIPADPNLNMNSLGTFGEINSKTGNRTLQGQIHFQF*
Ga0075428_1024644102	3300006844	Populus Rhizosphere	GETRSVAIRLDARNIFNHPTPANPNLNINSGTFGQITNKTGSRTLAGQVRLEF*
Ga0075421_1010056443	3300006845	Populus Rhizosphere	NHPTPGNPNLDINSGTFGEIQTKTGNRTLAGQLRLEF*
Ga0073934_107997882	3300006865	Hot Spring Sediment	DAQNVFNHPIPGNPNVNMNSGTFGEINSKTGSRSLQAQLRFEF*
Ga0075434_1006272582	3300006871	Populus Rhizosphere	PTPANPNLNINAGTFGQITTKIGSRSLAGQIRLEF*
Ga0075424_1006298271	3300006904	Populus Rhizosphere	LTIRINASNILNHPTPGNPNLDINSGTFGEITTKTGSRTLSGQLRLEF*
Ga0099793_104455861	3300007258	Vadose Zone Soil	KTIKIAESKTLTLRVDARNLFNHPTPVDPNLNINLGTFGEMNTKTGNRTLQGQIHFQF*
Ga0066710_1006311341	3300009012	Grasslands Soil	NLFNHPTPSNPTLNINAGTFGQIMTKTGNRILQAQLRLDF
Ga0066710_1010329002	3300009012	Grasslands Soil	VDARNVFNHPIPGDPNLNMNSGTFGEINSKTGNRRLQGQIHFQF
Ga0066710_1023660212	3300009012	Grasslands Soil	IAESKTLTLRVDARNIFNHPTPGDPNLNINSGTFGEINSKTGSRKLQGQIHFQF
Ga0066710_1033179751	3300009012	Grasslands Soil	MDAQNIFNHPTPDNPNFNISTGTFGQIMTKTGNRNLQTQIRLD
Ga0111539_115576951	3300009094	Populus Rhizosphere	VDAQNVMNHPNPGAPNLNVNSGTFGEINSKTGNRTLQGQVRFQF*
Ga0111539_123835221	3300009094	Populus Rhizosphere	KTLTFRVDAKNVFNHPTPADPNLNINSGTFGEINSKIGNRRLQGQIHFQF*
Ga0111539_132906811	3300009094	Populus Rhizosphere	QIAESKKLTFRIDANNVLNHPTPGNPSLNINSGTLGQITTKTGSRSLQAQLHLDF*
Ga0066709_1003446483	3300009137	Grasslands Soil	VDASNLFNHPTPGNPNLNINSGTFGEINTKTGFRTLAGQVRLEF*
Ga0066709_1027837552	3300009137	Grasslands Soil	VQNSTKIGECRNLTLRIDAQNVFNHPTPGNPNLNINSGTFGEINSKTGNR
Ga0114129_115600242	3300009147	Populus Rhizosphere	SFRLDAINVFNHPTPANPTLNINSGTFGQITSKNGNRSIAAQIRLDF*
Ga0105243_124311351	3300009148	Miscanthus Rhizosphere	RLDARNILNHPTPANPNLNINTGTFGQITTKTGSRSLAGQIRLEF*
Ga0111538_128834052	3300009156	Populus Rhizosphere	VAEAKNLTFRLDAQNVLNHPTPVLPNGSLNINSGTFGEVNNKIGNRSLQAQLRFDF*
Ga0075423_107117642	3300009162	Populus Rhizosphere	KIAESKTLTLRVDAKNVFNHPTPADPNLNMNLGTFGEINSKIGNRRLQGQIHFQF*
Ga0075423_129413172	3300009162	Populus Rhizosphere	AEGRSVTVRIDASNILNHPTPSNPNLDINSGTFGEISNKTGSRTLAGQVRLEF*
Ga0126382_100472271	3300010047	Tropical Forest Soil	NLLKTIKIAESKTLTLRLDARNVFNHPTPADPNLNINSGTFGEINSKIGNRRLQGQIHFQF*
Ga0126382_120941171	3300010047	Tropical Forest Soil	RIDAQNLFNHPNLGNPTLDINSGTFGQITTKTGFRTLAGQVRLEF*
Ga0134080_101117861	3300010333	Grasslands Soil	RNIFNHPTPGDPNLNINSLTFGEINSKTGSRKLQGQIHFQF*
Ga0134080_103356252	3300010333	Grasslands Soil	DARNVFNHPIPGDPNLNMNSGTFGEINSKTGNRRLQGQIHFQF*
Ga0134071_103749492	3300010336	Grasslands Soil	AESKTLTLRVDARNIFNHPTPGDPNLNINSLTFGEINSKTGSRKLQGQIHFQY*
Ga0134062_101484161	3300010337	Grasslands Soil	KTIKIAESKTLTLRVDARNLFNHPIPGDPNLNINSGTFGEINYKTGNRRLQGQIHFQF*
Ga0126370_112764651	3300010358	Tropical Forest Soil	ILNHPTPGNPNLNMNSGTFGQITTKTGNRSLAGQLRLELIS*
Ga0126370_115060092	3300010358	Tropical Forest Soil	RIGESRSISIRIDTRNVLNHPTPGTPNLNINSGTFGQITTKTGSRTLAGQLRLEF*
Ga0126379_109560291	3300010366	Tropical Forest Soil	NVFNHPTPGDPNLSINSGTFGEINSKTGNRTLQGQIHFQF*
Ga0126381_1045521221	3300010376	Tropical Forest Soil	NSATIGGNLNLNMNVGTFGQITNKTGNRTLAGQIRIQF*
Ga0126383_113595951	3300010398	Tropical Forest Soil	RIAESYRLTFRMDANNVLNHPTPGTPSLNINSGTFGQITTKTGSRTLQAQLHLDF*
Ga0126383_132181511	3300010398	Tropical Forest Soil	SNILNHPTPGNPNLDINSGTFGEIQTKTGNRTLAGQLRLEF*
Ga0134121_118639252	3300010401	Terrestrial Soil	ARNILNHPTPANPNLNINTGTFGQITTKTGSRSLAGQIRLEF*
Ga0150983_122303421	3300011120	Forest Soil	KNLTLRVDARNLFNHPTPADPNLNINSGTFGEINSKIGNRTLQGQIHFQF*
Ga0150983_128193041	3300011120	Forest Soil	SLKISETKNLTLRIDAQDLMNHSTPGAPNLTINSGTFGEINTKTGNRTLQGQIRLAF*
Ga0137427_100262281	3300011445	Soil	TPGNPNLNINAGTFGQITTKNGNRTLAGQIRLEF*
Ga0137383_104053372	3300012199	Vadose Zone Soil	LKTIKIAESKTLTLRVDARNLFNHPIPGDPNLNINSGTFGQINSKTGNRRLQGQIHFQF*
Ga0137383_109049771	3300012199	Vadose Zone Soil	KTLTLRVDARNIFNHPTPGDPNLNINSGTFGQIDSKTGSRKLQGQIHFQF*
Ga0137377_115777401	3300012211	Vadose Zone Soil	TLTLRVDARNVFNHPIPGDPNLNINSGTFGEINYKTGNRRLQGQIHFQF*
Ga0137387_112875781	3300012349	Vadose Zone Soil	TPGNPNLNINSGTFGEINSKTGNRSLAGQLRFEF*
Ga0137371_113339541	3300012356	Vadose Zone Soil	IAESKTLTLRVDARNVFNHPTPSDPNLNINSGTFGEINSKTGNRTLQGQIHFQF*
Ga0137361_100842894	3300012362	Vadose Zone Soil	LFNHPIPGDPNLNMNSGTFGEINSKTGNRRLQGQIHFQF*
Ga0157286_104700131	3300012908	Soil	NPGDPNLNINSGTFGEIDSKTGNRSLAGQVKFEF*
Ga0157290_101964172	3300012909	Soil	SVSFRMDARNLFNHPTPAGPNLNINSGTFGQITNKTGSRALAAQIRLEF*
Ga0157301_104661561	3300012911	Soil	MFNHPNPGNPSMNLNGGTFGQITTKTGNRSLAAQLRFEF*
Ga0137359_114735391	3300012923	Vadose Zone Soil	SKTLTLRVDARNVFNHPTPGDPNLSMNSGTFGQINSKIGSRKLQGQIHFQF*
Ga0126369_103441613	3300012971	Tropical Forest Soil	FNHPTPANPNLNINSGTFGQITSKTGSRTLAGQIRLEF*
Ga0134076_101568681	3300012976	Grasslands Soil	LRVDARNIFNHPTPGDPNLNINSLTFGEINSKTGSRKLQGQIHFQF*
Ga0134087_105363381	3300012977	Grasslands Soil	ARNVFNHPTPGDPNMNMNSGTFGQIDYKTGSTKLQGQIHFQF*
Ga0157374_118053811	3300013296	Miscanthus Rhizosphere	TPGNPNLNLNSGTFGQIATKTGSRTLAGQIRLEF*
Ga0157378_131980041	3300013297	Miscanthus Rhizosphere	LNHPAPANPNLNINTGTFGQITSKTGSRVLAAQIHFDF*
Ga0157375_126909893	3300013308	Miscanthus Rhizosphere	FNHPNPGDPNLNINSGTFGEIDSKTGNRSLAAQVRLEF*
Ga0157380_105384573	3300014326	Switchgrass Rhizosphere	AIRLDARNIFNHPTPANPNLNINTGTFGQITTKTGSRTLAGQIRLEF*
Ga0173480_100237322	3300015200	Soil	RMTEGTRLTVRIDSNNVFNHPNPGDPNLNINSGTFGEIDSKTGSRSLAGQVKFEF*
Ga0137409_109627991	3300015245	Vadose Zone Soil	RVDARNVFNHPTPADPNLNMNSGTFGEINSKTGNRRLQGQIHFQF*
Ga0132258_116843871	3300015371	Arabidopsis Rhizosphere	AQNLFNHPILGNPSLDINAGTFGQITTKTGFRTLAGQVRLEF*
Ga0132258_131409742	3300015371	Arabidopsis Rhizosphere	DAQNVMNHPTPGAPNMNINSGTFGEISTKTGNRTLQGQIRFQF*
Ga0132256_1037295801	3300015372	Arabidopsis Rhizosphere	LFNHPTPGNPNLNINSGTFGEIDTKTGSRILQAQMRFVF*
Ga0132257_1018721862	3300015373	Arabidopsis Rhizosphere	ARNLFNHPTPDNPNLEINSGTFGEIRSKSGSRSLAAQIRLEF*
Ga0132255_1024600593	3300015374	Arabidopsis Rhizosphere	IRLDARNILNHPTPGNPNLNINTGTFGQISIKTGSRTLAGQIRLEF*
Ga0134083_103226263	3300017659	Grasslands Soil	ESKSLTIRLDTNNILNHPTPGNPNLDINAGTFGEITTKTGSRTLAGQIRLEF
Ga0066655_100499153	3300018431	Grasslands Soil	FNHPTPGDPNLNINSLTFGEINSKTGSRKLQGQIHFQF
Ga0066655_106755391	3300018431	Grasslands Soil	KNLTLRVDARNVFNHPTPSDPNLNINSGTFGEINSKTGNRTLQSQIHFQF
Ga0066667_118189342	3300018433	Grasslands Soil	FNHPTPGDPNLNMNSGTFGQIDYKTGSRKLQGQIHFQF
Ga0066667_120832952	3300018433	Grasslands Soil	DGRNIFNHPTPGNPNLNINSGTFGQITTKTGSRSLAGQVRLEF
Ga0066667_122594792	3300018433	Grasslands Soil	RNVFNHPTPSDPNLNINSGTFGEINSKTGNRTLQGQIHFQF
Ga0210395_110077062	3300020582	Soil	LQKKMRIGESRSLAFRLDTKNIFNHPTPGAPNLNINSGTFGQITTKTGNRSLAGQIRLEF
Ga0209640_113796592	3300025324	Soil	DFDANVQKRIQVAESKNLTLRLDARNLFNHPTPDNPTLNINTGTFGEITAKTGSRTLAAQLRFEF
Ga0207682_100965342	3300025893	Miscanthus Rhizosphere	NHPTPANPNLNLNSGTFGEINNKTGFRTLAGQVRLEF
Ga0207680_101860461	3300025903	Switchgrass Rhizosphere	IFNHPTPGNPNLNLNSGTFGQIATKTGSRTLAGQIRLEF
Ga0207662_100728381	3300025918	Switchgrass Rhizosphere	RLDARNIFNHPTPGNPNLNLNSGTFGQIATKTGSRTLAGQIRLEF
Ga0207701_111594391	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	FRMSESTRLTVRIDANNVFNHPNPGDPNLNINTGTFGEIDSKTGSRSLAGQLRLEF
Ga0207706_115060851	3300025933	Corn Rhizosphere	SFRMDARNLFNHATPVGPNLNVNSGTFGQINNKTGSRALAAQIRLEF
Ga0207686_112163201	3300025934	Miscanthus Rhizosphere	NIQKTFKTSETTNLTVRLDSNNVFNHPNPGNPNMNLNSGTFGQITTKTGNRSLAAQLRFV
Ga0207670_109434583	3300025936	Switchgrass Rhizosphere	PTPANPNLNINTGTFGQITNKTGSRTLAGQLRLEF
Ga0207711_109303812	3300025941	Switchgrass Rhizosphere	GTRLTVRIDSNNVFNHPNPGDPNLNINSGTFGEIDSKTGNRSLAGQVKFEF
Ga0207668_101785871	3300025972	Switchgrass Rhizosphere	VFNHPNPGDPNVNINAGTFGEIDSKTGSRSLAAQVRFEF
Ga0207648_116241281	3300026089	Miscanthus Rhizosphere	NVLNHPTPGNLPGTLTLTINTGTFGQITNKNGSRTLQAQLHLDF
Ga0209803_10555292	3300026332	Soil	TLTLRVDARNIFNHPTPGDPNLNINSGTFGEINSKTGSRKLQGQIHFQF
Ga0209057_11913382	3300026342	Soil	RVDARNIFNHPTPGDPNLNINSLTFGEINSKTGSRKLQGQIHFQF
Ga0209376_13675821	3300026540	Soil	VDARNIFNHPTPGDPNLNINSLTFGEINSKTGSRKLQGQIHFQF
Ga0209515_104630811	3300027835	Groundwater	ILKTVKIAESKTLTLRVDARNVFNHPTPADPNLNMNSGTFGEINSKIGNRRLQGQIHFQF
Ga0209062_13189551	3300027965	Surface Soil	ANLQKKMRIGESRSLAFRLDTRNIFNHPTPGAPNLNINSGTFGQIATKTGNRSLAGQIRLEF
Ga0170820_111979722	3300031446	Forest Soil	FNHPNLGNPTLDMNSGTFGQITTKTGFRTLAGQVRFEF
Ga0310813_100559851	3300031716	Soil	RSLAIRLDARNIFNHPTPGNPNLNINTGTFGQITTKTGSRTLAGQVRLEF
Ga0307472_1005656312	3300032205	Hardwood Forest Soil	LKTIKIRESKTLTLRVDARNVFNHPTPADPNLNINSLATFGEINSKIGSRKLQGQIHFQF

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign