Metagenome / Metatranscriptome Family F068645

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F068645
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	50 residues
Representative Sequence	SVLLVGSKEEAKQQAKTLARSLGLKVYGIVDKTGTGEEPRPWLVPGVGKSL
Number of Associated Samples	87
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.42 %
% of genes near scaffold ends (potentially truncated)	92.74 %
% of genes from short scaffolds (< 2000 bps)	88.71 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (54.032 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (41.935 % of family members)
Environment Ontology (ENVO)	Unclassified (66.129 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 27.45% β-sheet: 7.84% Coil/Unstructured: 64.71%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF00313	CSD	29.84
PF03279	Lip_A_acyltrans	6.45
PF01381	HTH_3	0.81
PF13561	adh_short_C2	0.81
PF03006	HlyIII	0.81
PF04909	Amidohydro_2	0.81
PF06824	Glyco_hydro_125	0.81
PF00216	Bac_DNA_binding	0.81
PF13439	Glyco_transf_4	0.81
PF05598	DUF772	0.81
PF01464	SLT	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG1560	Palmitoleoyl-ACP: Kdo2-lipid-IV acyltransferase (lipid A biosynthesis)	Lipid transport and metabolism [I]	6.45
COG4261	Predicted acyltransferase, LPLAT superfamily	General function prediction only [R]	6.45
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.81
COG1272	Predicted membrane channel-forming protein YqfA, hemolysin III family	Intracellular trafficking, secretion, and vesicular transport [U]	0.81
COG3538	Meiotically up-regulated gene 157 (Mug157) protein (function unknown)	Function unknown [S]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.03 %
Unclassified	root	N/A	45.97 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.03 %
Unclassified	root	N/A	45.97 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.03 %
Unclassified	root	N/A	45.97 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.97 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	43.55 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.97 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	39.52 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.97 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	11.29 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	6.45 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.97 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.45 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.81 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.97 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	6.45 %
Rhodospirillales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	0.81 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.81 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573002\|GZIGXIF01DZT7H	Not Available	512	Open in IMG/M
3300005332\|Ga0066388_101217860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1289	Open in IMG/M
3300005363\|Ga0008090_15885832	Not Available	645	Open in IMG/M
3300005764\|Ga0066903_102860687	Not Available	936	Open in IMG/M
3300006796\|Ga0066665_10283897	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1324	Open in IMG/M
3300009012\|Ga0066710_103452057	Not Available	599	Open in IMG/M
3300009137\|Ga0066709_100469072	All Organisms → cellular organisms → Bacteria	1765	Open in IMG/M
3300009137\|Ga0066709_103939184	All Organisms → cellular organisms → Bacteria → Proteobacteria	539	Open in IMG/M
3300010046\|Ga0126384_10463769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1084	Open in IMG/M
3300010048\|Ga0126373_10407796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1385	Open in IMG/M
3300010048\|Ga0126373_11214033	Not Available	820	Open in IMG/M
3300010358\|Ga0126370_10355847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1185	Open in IMG/M
3300010358\|Ga0126370_11589781	Not Available	625	Open in IMG/M
3300010360\|Ga0126372_10611680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1048	Open in IMG/M
3300010360\|Ga0126372_11934635	Not Available	635	Open in IMG/M
3300010360\|Ga0126372_11946341	Not Available	634	Open in IMG/M
3300010361\|Ga0126378_10308299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium	1687	Open in IMG/M
3300010376\|Ga0126381_102911565	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300010376\|Ga0126381_103545259	Not Available	612	Open in IMG/M
3300010376\|Ga0126381_104694069	Not Available	526	Open in IMG/M
3300010376\|Ga0126381_105112043	Not Available	502	Open in IMG/M
3300010398\|Ga0126383_10718954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1078	Open in IMG/M
3300010398\|Ga0126383_12282357	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	627	Open in IMG/M
3300011120\|Ga0150983_15707849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	556	Open in IMG/M
3300012212\|Ga0150985_113079119	Not Available	761	Open in IMG/M
3300012362\|Ga0137361_10084500	All Organisms → cellular organisms → Bacteria	2721	Open in IMG/M
3300012469\|Ga0150984_102536370	Not Available	531	Open in IMG/M
3300012469\|Ga0150984_110436121	Not Available	599	Open in IMG/M
3300012582\|Ga0137358_10095319	All Organisms → cellular organisms → Bacteria	2013	Open in IMG/M
3300012923\|Ga0137359_11566603	Not Available	547	Open in IMG/M
3300012957\|Ga0164303_11457348	Not Available	515	Open in IMG/M
3300015264\|Ga0137403_10021185	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6972	Open in IMG/M
3300016270\|Ga0182036_11416496	Not Available	582	Open in IMG/M
3300016294\|Ga0182041_10947841	Not Available	776	Open in IMG/M
3300016294\|Ga0182041_11393958	Not Available	643	Open in IMG/M
3300016319\|Ga0182033_10502926	All Organisms → cellular organisms → Bacteria → Proteobacteria	1041	Open in IMG/M
3300016319\|Ga0182033_11086755	Not Available	714	Open in IMG/M
3300016341\|Ga0182035_10912825	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	775	Open in IMG/M
3300016341\|Ga0182035_11984048	Not Available	529	Open in IMG/M
3300016357\|Ga0182032_11134012	Not Available	671	Open in IMG/M
3300016357\|Ga0182032_11609262	Not Available	565	Open in IMG/M
3300016387\|Ga0182040_11405597	Not Available	591	Open in IMG/M
3300016387\|Ga0182040_11952472	Not Available	504	Open in IMG/M
3300016404\|Ga0182037_11105954	Not Available	693	Open in IMG/M
3300016422\|Ga0182039_10757525	All Organisms → cellular organisms → Bacteria	859	Open in IMG/M
3300016445\|Ga0182038_11760279	Not Available	559	Open in IMG/M
3300021170\|Ga0210400_11285553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	587	Open in IMG/M
3300021358\|Ga0213873_10269982	Not Available	543	Open in IMG/M
3300021560\|Ga0126371_10038794	All Organisms → cellular organisms → Bacteria	4502	Open in IMG/M
3300021560\|Ga0126371_10948336	Not Available	1003	Open in IMG/M
3300021560\|Ga0126371_12734443	Not Available	598	Open in IMG/M
3300026528\|Ga0209378_1078151	Not Available	1503	Open in IMG/M
3300027795\|Ga0209139_10186063	All Organisms → cellular organisms → Bacteria	735	Open in IMG/M
3300030813\|Ga0265750_1090761	Not Available	521	Open in IMG/M
3300030988\|Ga0308183_1013594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1293	Open in IMG/M
3300031546\|Ga0318538_10031630	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2470	Open in IMG/M
3300031546\|Ga0318538_10176994	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1134	Open in IMG/M
3300031561\|Ga0318528_10207510	Not Available	1049	Open in IMG/M
3300031561\|Ga0318528_10409490	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	728	Open in IMG/M
3300031564\|Ga0318573_10059621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1883	Open in IMG/M
3300031573\|Ga0310915_11202435	Not Available	524	Open in IMG/M
3300031668\|Ga0318542_10041634	All Organisms → cellular organisms → Bacteria → Proteobacteria	2043	Open in IMG/M
3300031679\|Ga0318561_10524126	Not Available	652	Open in IMG/M
3300031680\|Ga0318574_10026070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2906	Open in IMG/M
3300031681\|Ga0318572_10259784	Not Available	1022	Open in IMG/M
3300031682\|Ga0318560_10587708	Not Available	603	Open in IMG/M
3300031719\|Ga0306917_10196747	All Organisms → cellular organisms → Bacteria → Proteobacteria	1524	Open in IMG/M
3300031719\|Ga0306917_10760741	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	760	Open in IMG/M
3300031719\|Ga0306917_11060539	Not Available	632	Open in IMG/M
3300031723\|Ga0318493_10517356	Not Available	661	Open in IMG/M
3300031736\|Ga0318501_10694433	Not Available	561	Open in IMG/M
3300031744\|Ga0306918_11022738	All Organisms → cellular organisms → Bacteria	641	Open in IMG/M
3300031747\|Ga0318502_10286131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	967	Open in IMG/M
3300031747\|Ga0318502_10801942	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	571	Open in IMG/M
3300031763\|Ga0318537_10020404	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2302	Open in IMG/M
3300031763\|Ga0318537_10168252	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	816	Open in IMG/M
3300031771\|Ga0318546_10912068	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300031771\|Ga0318546_11025930	Not Available	580	Open in IMG/M
3300031777\|Ga0318543_10444161	Not Available	581	Open in IMG/M
3300031780\|Ga0318508_1072094	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	937	Open in IMG/M
3300031781\|Ga0318547_10508304	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	744	Open in IMG/M
3300031782\|Ga0318552_10580099	Not Available	572	Open in IMG/M
3300031798\|Ga0318523_10054981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1880	Open in IMG/M
3300031819\|Ga0318568_10064521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2138	Open in IMG/M
3300031833\|Ga0310917_10577595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	764	Open in IMG/M
3300031833\|Ga0310917_11038828	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	548	Open in IMG/M
3300031845\|Ga0318511_10523467	Not Available	550	Open in IMG/M
3300031859\|Ga0318527_10094765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1220	Open in IMG/M
3300031879\|Ga0306919_11288760	Not Available	553	Open in IMG/M
3300031879\|Ga0306919_11444496	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300031890\|Ga0306925_11276269	Not Available	731	Open in IMG/M
3300031890\|Ga0306925_11759357	Not Available	595	Open in IMG/M
3300031890\|Ga0306925_12269684	Not Available	502	Open in IMG/M
3300031910\|Ga0306923_10021564	All Organisms → cellular organisms → Bacteria	6822	Open in IMG/M
3300031910\|Ga0306923_11320233	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	764	Open in IMG/M
3300031910\|Ga0306923_11821050	All Organisms → cellular organisms → Bacteria	624	Open in IMG/M
3300031912\|Ga0306921_10354847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1714	Open in IMG/M
3300031912\|Ga0306921_11332651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	792	Open in IMG/M
3300031941\|Ga0310912_10514862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	932	Open in IMG/M
3300031941\|Ga0310912_10639715	Not Available	826	Open in IMG/M
3300031942\|Ga0310916_10094812	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2387	Open in IMG/M
3300031945\|Ga0310913_10732846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	698	Open in IMG/M
3300031947\|Ga0310909_10636311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	889	Open in IMG/M
3300031947\|Ga0310909_11451044	Not Available	548	Open in IMG/M
3300031959\|Ga0318530_10258701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	717	Open in IMG/M
3300031981\|Ga0318531_10368654	Not Available	649	Open in IMG/M
3300032001\|Ga0306922_10221698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2031	Open in IMG/M
3300032001\|Ga0306922_10650164	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1113	Open in IMG/M
3300032025\|Ga0318507_10145523	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1011	Open in IMG/M
3300032035\|Ga0310911_10668985	Not Available	602	Open in IMG/M
3300032039\|Ga0318559_10378004	Not Available	660	Open in IMG/M
3300032042\|Ga0318545_10262714	Not Available	620	Open in IMG/M
3300032054\|Ga0318570_10220565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	858	Open in IMG/M
3300032054\|Ga0318570_10572935	Not Available	515	Open in IMG/M
3300032059\|Ga0318533_10354111	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1069	Open in IMG/M
3300032059\|Ga0318533_10596342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	811	Open in IMG/M
3300032060\|Ga0318505_10052195	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1755	Open in IMG/M
3300032063\|Ga0318504_10080711	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1428	Open in IMG/M
3300032090\|Ga0318518_10323019	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	792	Open in IMG/M
3300032091\|Ga0318577_10020293	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2753	Open in IMG/M
3300032091\|Ga0318577_10071012	All Organisms → cellular organisms → Bacteria → Proteobacteria	1596	Open in IMG/M
3300032261\|Ga0306920_100225178	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	2798	Open in IMG/M
3300033289\|Ga0310914_11215682	Not Available	655	Open in IMG/M
3300034447\|Ga0370544_10836	Not Available	676	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.77%
Host-Associated	Host-Associated	3.23%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	95.97%
Plants	Host-Associated → Plants	3.23%
Aquatic	Environmental → Aquatic	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	95.97%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.42%
Freshwater	Environmental → Aquatic → Freshwater	0.81%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	93.55%
Loam	Environmental → Terrestrial → Soil → Loam	2.42%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.61%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	66.94%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.77%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.03%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.42%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.61%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.81%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	41.94%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	25.00%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	14.52%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.23%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	3.23%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.61%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.61%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	1.61%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.81%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.81%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.81%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.81%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573002	Grass soil microbial communities from Rothamsted Park, UK - FE1 (NaCl 30g/L 5ml)	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021358	Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3	Host-Associated	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300027795	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)	Environmental	Open in IMG/M
3300030813	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030988	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_157 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031777	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f24	Environmental	Open in IMG/M
3300031780	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f21	Environmental	Open in IMG/M
3300031781	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f20	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300034447	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_119 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FE1_03471690	2189573002	Grass Soil	YDRKRVKFGLVGSKEEAKQQAKTLARSLGLKLYGLVDNKTAARNEPRPWLVPGAGNSV
Ga0066388_1012178604	3300005332	Tropical Forest Soil	WIFLVASKKEAKQQAKTLARSLGLNVYGSVDKTGTSEEPHPWLVPDVGTSI*
Ga0008090_158858321	3300005363	Tropical Rainforest Soil	QRDDTGKVIGTPSILPVGSKEEAKQQAKTLARSLGLKVYGIVDKTGTGDQPHPWLVPGVGKSL*
Ga0066903_1028606871	3300005764	Tropical Forest Soil	LASVLLVGSKEEAKQQAKTLARSLGLKVYGIVDKTGTGEEPRPWLVPGVGKSL*
Ga0066665_102838971	3300006796	Soil	RPSVSLVGSREEAKQRAKMLARSLGLKLYGIVDKTSTSAESRLGLMPGVGKSL*
Ga0066710_1034520571	3300009012	Grasslands Soil	PSVSLVGSKEEAKQQAKTLARSLGLKRYGIVDKTGSSSAEPPPWLVPGVGKSF
Ga0066709_1004690724	3300009137	Grasslands Soil	SLVGSKEEAKQQAKTLARSLGLKLYGIVDKTGTGAQPRPWLVPGVVTSL*
Ga0066709_1039391842	3300009137	Grasslands Soil	EEAKQQAKTLARSLGLKLFGIVDKTSTSAEPRPWLVAGVGKSL*
Ga0126384_104637693	3300010046	Tropical Forest Soil	GKVIGTPSVLLVGSKEEAKQQAKTLARSLGLKVYGIVDKTGTGEEPRTWIVPGVGKSL*
Ga0126373_104077961	3300010048	Tropical Forest Soil	EAKQQAKTLARSLGLKVYGIVDKTGTGEEPHLWLVPGVGKSL*
Ga0126373_112140332	3300010048	Tropical Forest Soil	LASVLLVGSKEEAKQQAKTLARSLRLKVYGIVDKTGTGEEPRPWLVPGVGKSL*
Ga0126370_103558473	3300010358	Tropical Forest Soil	SQRDDTGKVIGTPSVLLVGSKEEAKQQAKTLARSLGLKVYGIVDKTGTGEEPRPWLVPGVGESL*
Ga0126370_115897811	3300010358	Tropical Forest Soil	ISQLDDTGEVIGTPSVLLVASKEEAKQQAKTLARSLGLKVYGIVDKTAATGEGPRPWLVPGVGKSL*
Ga0126372_106116801	3300010360	Tropical Forest Soil	IGTPSVLLVGSKEEAKQQAKTLARSLGLKVYGIVDKTGTGEEPRPWLVPGVGESL*
Ga0126372_119346351	3300010360	Tropical Forest Soil	IGTPSVLLVGSKEEAKQQAKTLARSLGLKVYGIVDKTGTGEKPRTWIVPGVGKSL*
Ga0126372_119463411	3300010360	Tropical Forest Soil	VIGTPSVLLVGSKEEAKQQAKTLARSLGLKVYGLVDKTGTGEQPHPWLVP
Ga0126378_103082991	3300010361	Tropical Forest Soil	SKEEAKQQAKTLARSLGLKVYGIVDKTGAGEEPHPWLVPGVGKSL*
Ga0126381_1029115652	3300010376	Tropical Forest Soil	VLPVGSKEEAKQQAKTLARSLGLKVYGIVDKTGTGEQPRPWLVPGVGESL*
Ga0126381_1035452591	3300010376	Tropical Forest Soil	VIGTPSVLLVGSKEEAKQQAKTLARSLGLKVYGIVDKTGTGEEPRPWLVPGVGKSL*
Ga0126381_1046940691	3300010376	Tropical Forest Soil	ISQRDDAGKVIGTPSVLLVGSKEEAKQRAKTLARSLGLKVYGVVDKTGTGEQPLPWLVPGVGKSL*
Ga0126381_1051120432	3300010376	Tropical Forest Soil	GTPSVLLVGSKEEAKQQAKTLARSLGLKVYGIVDKTGTGEEPRPWLVPGVGKSL*
Ga0126383_107189541	3300010398	Tropical Forest Soil	VLLVGSKEEAKQQAKTLARSLRLKVYGIVDKTGTGEEPRPWLVPGVGKSL*
Ga0126383_122823571	3300010398	Tropical Forest Soil	EAKQQAKTLARSLGLNVYGNVDKTGTSEEPHPWLVPDVGTSI*
Ga0150983_157078491	3300011120	Forest Soil	IGHPSVTLVESKEAAKQQAKTLARSLGLKIYGIVDKTGTGEEPHPWLVPGVGKSL*
Ga0150985_1130791191	3300012212	Avena Fatua Rhizosphere	SVFLVESKEEAKQQATTLTRSLGLGVYGFVDKTGASDVQRPGLVPSVGKST*
Ga0137361_100845001	3300012362	Vadose Zone Soil	QAKTLARSLGLKLYGIVDKTGTSAEPRPWLVPGVGTSL*
Ga0150984_1025363702	3300012469	Avena Fatua Rhizosphere	VGKPSVFLVESKEEAKQQATTLTRSLGLGVYGFVDKTGASDVQRPGLVPSVGKST*
Ga0150984_1104361211	3300012469	Avena Fatua Rhizosphere	KVVGKPSVFLVESKEKAKQQAETLTRSLGLGVYGFADKTGASDALRPG*
Ga0137358_100953192	3300012582	Vadose Zone Soil	GSKEEAKRQAKTLARSLGLKLYGIVDKTGTSAEPRPWLVPGVGTSL*
Ga0137359_115666031	3300012923	Vadose Zone Soil	QAKTLARSLGLKLYGIVDKTGTGAKPRPWLVPGVGKSL*
Ga0164303_114573481	3300012957	Soil	SVFLVGSKEEAKQQATTLTRSLGLGVYGFVDKTGASDVQRPRLVPGVGKST*
Ga0137403_1002118511	3300015264	Vadose Zone Soil	VIGRPSVSLVGSKEEAKQQAKTLARSLGLKLYGIVDKTGTGAEPRPWLVPGVGTSL*
Ga0182036_114164961	3300016270	Soil	SKEEAKQQAKTLARSLGLKVYGIVDKTGTGEEPLPWLVPGVGKSL
Ga0182041_109478411	3300016294	Soil	TGQVIGTPFVLLVGSKDEAKQQAKTLARSLGLKVYGIVDKTGTGEPPRPWLIPGVGKSL
Ga0182041_113939582	3300016294	Soil	QRDDTGKVIGTPAVLLVGSKEEAKQQAKTLARSLGLKVYGIVDKTGTGEQPRPWLVPGVGESL
Ga0182033_105029261	3300016319	Soil	PSVLLVGSKEEAKQQAKTLARSLGLKVYGIVDKTGTGDQPHPWLVPGVGKSL
Ga0182033_110867551	3300016319	Soil	EAKQQAKTLARSLGLKVYGIVDKTGTGEQPHPWLVPGVGESL
Ga0182035_109128251	3300016341	Soil	GSKEEAKQQAKTLARSLGLKVYGIVDKTGTGEEPHPWLVPGVGKSL
Ga0182035_119840481	3300016341	Soil	KEEAKQQAKTLARSLGLKVYGIVDKTGAGEEPHPWLVPGVGTSL
Ga0182032_111340121	3300016357	Soil	VGSKEEAKQRAKTLARSLGLKVYGIVDKTGTGEQPLPWLVPGVGKSL
Ga0182032_116092621	3300016357	Soil	VLLVGSKEEAKQQAKTLARSLGLKVYGIVDKTGTGDQPHPWLVPGVGKSL
Ga0182040_114055971	3300016387	Soil	SKEEAKQQAKTLARSLGLKVYGIVDKTGTGEEPRPWFVPGVGKSL
Ga0182040_119524722	3300016387	Soil	GSKEEAKQQAKTLARSLGLKVYGIVDETGAGEEPRPWLVPGVGKSL
Ga0182037_111059541	3300016404	Soil	TISQRDDAGKVIGAPSIFLVESKEEAKQQAKALARSLGLKVYGIVDKTGAGEESHPWLVPGVGTSL
Ga0182039_107575252	3300016422	Soil	GSKEEAKQQAKTLARSLGLKVYGIVDKTGTGEEPHPWLVPGVSKSL
Ga0182038_117602791	3300016445	Soil	VGSKEEAKQQAKTLARSLGLKVYGIVDKTGTGEEPRPWLVPGVGKSL
Ga0210400_112855532	3300021170	Soil	TLARSLGLKLYGIVDKTGTSAESRPWVVPGVGKSL
Ga0213873_102699822	3300021358	Rhizosphere	SQRDDAGKVIGTPSVLLVGSKEEAKQQAKTLARSLGLKVYGIVDKTGTAEQPRPWLVPGVGSSL
Ga0126371_100387941	3300021560	Tropical Forest Soil	VIGTPSIFLVESKEEAKQQAKALARSLGLKVYGIVDKTGAGEEPHPWLVPGVGKSL
Ga0126371_109483361	3300021560	Tropical Forest Soil	LASVLLVGSKEEAKQQAKTLARSLRLKVYGIVDKTGTGEEPRPWLVPGVGKSL
Ga0126371_127344431	3300021560	Tropical Forest Soil	SVLLVGSKEEAKQQAKTLARSLGLKVYGIVDKTGTGEEPRPWLVPGVGKSL
Ga0209378_10781512	3300026528	Soil	TLARSLGLKLFGIVDKTGTSAEPRPWLVAGVGKSL
Ga0209139_101860632	3300027795	Bog Forest Soil	GKVIGRPSVSLVGSKEEAKRQAKTLARSLGLKLYGLVDKTADRNKPCPWLVPGVGNSV
Ga0265750_10907611	3300030813	Soil	AGKVIGRPSVTLVGTKDEAKQQAKSLARSLGLKVYGIVDKTGTVEETQPWLVPGVGESL
Ga0308183_10135941	3300030988	Soil	TISQRDGVGKVVGKPSVFLVESKEEAKQQATTLTRSLGLGVYGFVDKTGANDVQRPGLVPSVGKST
Ga0318538_100316306	3300031546	Soil	GKVIGTPSVFLVESKEEAKQQAKALARSLGLKVHGIVDKTGAGEESHPWLVPGVGKSL
Ga0318538_101769943	3300031546	Soil	VIGTPSVLPVGSKEEAKQQAKTLARSLGLKVYGIVDKTGTSEQPRPWLVPGVGESL
Ga0318528_102075102	3300031561	Soil	VIGTPFVLLVGSKDEAKQQAKTLARSLGLKVYGIVDKTGTGEPPRPWLIPGVGKSL
Ga0318528_104094901	3300031561	Soil	EEAKQQAKTLARSLGLKVYGIVDKTGTGEQPRPWLVPGVGESL
Ga0318573_100596211	3300031564	Soil	QQAKTLARSLGLKVYGIVDKTGTGEQPHPWLVPGVGESL
Ga0310915_112024351	3300031573	Soil	LVGSKEEAKQQAKTLARSLGLKVYGIVDKTGTGEEPHPWLVPGVGKSL
Ga0318542_100416341	3300031668	Soil	LVESKEEAKQQAKTLARSLGLKVYGIVDKTGTREEPRPWLVPGVGKSL
Ga0318561_105241261	3300031679	Soil	GKVIGTPSVLLVGSKEEAKQQAKTLARSLGLKVYGIVDKTGTGEEPLPWLVPGVGKSL
Ga0318574_100260707	3300031680	Soil	PSVFLVESKEEAKQQAKALARSLGLKVHGIVDKTGAGEESHPWLVPGVGKSL
Ga0318572_102597841	3300031681	Soil	VIGTPSVLLVGSKDEAKQQAKTLARSLGLKVYGIVDKTGTGEPPRPWLIPGVGKSL
Ga0318560_105877081	3300031682	Soil	VIGTPSALLVGSKEEAKQQAKTLARSLGLKVYGIVDKTGTREEPRPWLVPGVGKSL
Ga0306917_101967471	3300031719	Soil	KVIGTPLVLLVGSKEEAKQRAKTLARSLGLTVYGIVDKTGTGEQPLPWLVPGVGKSL
Ga0306917_107607411	3300031719	Soil	VESKEEAKQQAKALARSLGLKVYGIVDKTGAGEESHPWLVPGVGTSL
Ga0306917_110605392	3300031719	Soil	SVLLVGSKEEAKQQAKTLARSLGLKVYGIVDKTGTGGDPHPWLVTGVGKSL
Ga0318493_105173561	3300031723	Soil	EEAKQQAKTLARSLGLKVYGIVDKTGTGEEPHPWLVPGVGKSL
Ga0318501_106944331	3300031736	Soil	GKVIGTPSVLLVGSKEEAKQQAKTLARSLGLKVYGIVDKTGTGEGPRPWLVPGVGESL
Ga0306918_110227381	3300031744	Soil	AVLLVGSKEEAKQQAKTLARSLGLKVYGIVDKTGTGEQPHPWRVPGVGKSL
Ga0318502_102861312	3300031747	Soil	CQRDDAGKVIGTPSVFLVESKEEAKQQAKALARSLGLKVHGIVDKTGAGEESHPWLVPGVGKSL
Ga0318502_108019421	3300031747	Soil	SQRDDTGKVIGTPSVLLVGSKQEAKQQAKTLARSLGLKVYGIVDKTGTGEQPLPWLVPGVGKSL
Ga0318537_100204045	3300031763	Soil	AKQQAKALARSLGLKVHGIVDKTGAGEESHPWLVPGVGKSL
Ga0318537_101682522	3300031763	Soil	AKTLARSLGLKVYGIVDKTGTGEQPHPWLVPGVGESL
Ga0318546_109120681	3300031771	Soil	QAKTLARSLGLKVYGIVDKTGTGEQPRPWLVPGVGESL
Ga0318546_110259301	3300031771	Soil	DDTGKVIGTPSVLLVGSKEEAKQQAKTLARSLGLKVYGIVDKTGTGDQPHPWLVPGVGKS
Ga0318543_104441612	3300031777	Soil	PAVLLVGSKEEAKQQAKTLARSLGLKVYGIVDKTGTGEQPRPWLVPGVGESL
Ga0318508_10720941	3300031780	Soil	AGKVIGGPSVFLVGTKEEAKQQAKTLARSLGLKVYGIVDKSGMSEEPGPWLVPGVGKSF
Ga0318547_105083041	3300031781	Soil	GTPSIFLVESKEEAKQQAKALARSLGLKVHGIVDKTGAGEESHPWLVPGVGKSL
Ga0318552_105800991	3300031782	Soil	KEEAKQQAKTLARSLGLKVYGIVDKTGTGEEPLPWLVPGVGKSL
Ga0318523_100549815	3300031798	Soil	KTLARSLGLKVYGIVDKTGTGEQPHPWLVPGVGKSL
Ga0318568_100645211	3300031819	Soil	AGKVIGTPSVFLVESKEEAKQQAKALARSLGLKVHGIVDKTGAGEESHPWLVPGVGKSL
Ga0310917_105775952	3300031833	Soil	VLIVGSKEEAKQQAKTLARSLGLKVYGIVDKTGTGEEPHPWLVPGVGKSL
Ga0310917_110388282	3300031833	Soil	SVLLVGSKEEAKQRAKTLARSLGLTVYGIVDKTGTGEQPLPWLVPGVGKSL
Ga0318511_105234671	3300031845	Soil	GKVIGTPSVFLVESKEEAKQQAKALARSLGLKVYGIVDKTGAGEEPHPWLVPGVGTSL
Ga0318527_100947651	3300031859	Soil	GKVIGGPSVFLVGTKEEAKQQAKTLARSLGLKVYGIVDKSGMSEEPGPWLVPGVGKSF
Ga0306919_112887601	3300031879	Soil	IGTPLVLLVGSKEEAKQRAKTLARSLGLKVYGIVDKTSTGEQPLPWLVPGVGKSL
Ga0306919_114444962	3300031879	Soil	FLVESKEEAKQQAKALARSLGLKVHGIVDKTGAGEESHPWLVPGVGKSL
Ga0306925_112762691	3300031890	Soil	LLVGSKEEAKHQAKTLARSLGLKVYGIVDKTGTGEEPHPWLVPGVGKSL
Ga0306925_117593571	3300031890	Soil	KTLARSLGLKVYGIVDKTGTGEQPRPWLVPGVGESL
Ga0306925_122696841	3300031890	Soil	KEEAKQQAKTLARSLGLKVYGIVDETGAGEEPRPWLVPGVGKSL
Ga0306923_1002156413	3300031910	Soil	SKEEAKQQAKTLARSLGLKVYGIVDKTGTGEQPHPWLVPGVGKSL
Ga0306923_113202331	3300031910	Soil	QAKTLARSLGLKVYGIVDKTGTGEEPHPWLVPGVGKSL
Ga0306923_118210501	3300031910	Soil	SKEEAKQQAKTLARSLGLKVYGIVDKTGTGEQPHPWLVPGVGESL
Ga0306921_103548471	3300031912	Soil	KEEAKQQAKTLARSLGLKVYGIVDKTGTGDQPHPWLVPGVGKSL
Ga0306921_113326512	3300031912	Soil	GKGIGTPSVLLVGSKEEAKQQAKTLARSLGLKVYGIVDKTGTGDQPHPWLVPGVGKSL
Ga0310912_105148622	3300031941	Soil	TPSVLPVGSKEEAKQQAKTLARSLGLKVYGIVDKTGTSEQPRPWLVPGVGESL
Ga0310912_106397151	3300031941	Soil	GTPSIFLVESKEEAKQQAKALARSLGLKVYGIVDKTGAGEESHPWLVPGVGTSL
Ga0310916_100948121	3300031942	Soil	PLVLLVGSKEEAKQRAKTLARSLGLKVYGIVDKTSTGEQPLPWLVPGVGKSL
Ga0310913_107328461	3300031945	Soil	LLVGSKEEAKQQAKTLARSLGLKVYGIVDKTGTGEEPLPWLVPGVGKSL
Ga0310909_106363113	3300031947	Soil	KTLARSLGLKVYGIVDKTGTGEQPHPWLVPGVGESL
Ga0310909_114510441	3300031947	Soil	KQQAKTLARSLGLKVYGIVDKTGTREEPRPWLVPGVGKSL
Ga0318530_102587011	3300031959	Soil	DAGKVIGGPSVFLVGTKEEAKQQAKTLARSLGLKVYGIVDKSGMSEEPGPWLVPGVGKSF
Ga0318531_103686542	3300031981	Soil	EEAKQQAKTLARSLGLKVYGIVDKTGTGEQPHPWLVPGVGESL
Ga0306922_102216985	3300032001	Soil	SKQEAKQQAKTLARSLGLKVYGIVDKTGTGEQPLPWLVPGVGKSL
Ga0306922_106501641	3300032001	Soil	QQAKTLARSLGLKVYGIVDKTGTGEEPHPWLVPGVGKSL
Ga0318507_101455231	3300032025	Soil	IGTPSVLLVGSKQEAKQQAKTLARSLGLKVYGIVDKTGTGEQPLPWLVPGVGKSL
Ga0310911_106689851	3300032035	Soil	QQAKALARSLGLKVYGIVDKTGAGEESHPWLVPGVGTSL
Ga0318559_103780042	3300032039	Soil	VLLVGSKEEAKQQAKTLARSLGLKVYGIVDKTGTGEQPRPWLVPGVGESL
Ga0318545_102627141	3300032042	Soil	VIGTPSIFLVESKEEAKQQAKALARSLGLKVYGIVDKTGAGEESHPWLVPGVGTSL
Ga0318570_102205651	3300032054	Soil	IGTPAVFLVGSKEEAKQQAKTLARSLGLKVYGIVDKTGTGEQPRPWLVPGVGESL
Ga0318570_105729352	3300032054	Soil	LLVESKEEAKQQAKALARSLGLKVHGIVDKTGAGEESHPWLVPGVGKSL
Ga0318533_103541112	3300032059	Soil	VLPVGSKEEAKQQAKTLARSLGLKVYGIVDKTGTSEQPRPWLVPGVGESL
Ga0318533_105963421	3300032059	Soil	IGTPSIFLVESKEEAKQQAKALARSLGLKVYGIVDKTGAGEESHPWLVPGVGTSL
Ga0318505_100521951	3300032060	Soil	AKTLARSLGLKVYGIVDKTGTGEQPLPWLVPGVGKSL
Ga0318504_100807114	3300032063	Soil	VIGGPLVFLVGTKEEAKQQAKTLARSLGLKVYGIVDKSGMSEEPGPWLVPGVGKSF
Ga0318518_103230191	3300032090	Soil	EAKQQAKTLARSLGLKVYGIVDKTGTGEQPRPWLVPGVGESL
Ga0318577_100202931	3300032091	Soil	LVGSKDEAKQQAKTLARSLGLKVYGIVDKTGTGEPPRPWLIPGVGKSL
Ga0318577_100710121	3300032091	Soil	SVLLVGSKQEAKQQAKTLARSLGLKVYGIVDKTGTGEQPLPWLVPGVGKSL
Ga0306920_1002251785	3300032261	Soil	KQQAKTLARSLGLKVYGIVDKTGTGEQPRPWLVPGVGESL
Ga0310914_112156821	3300033289	Soil	DDTGKVIGTPSVLLVGSKEEAKQQAKTLARSLGLKVYGIVDKTGTGEEPLPWLVPGVGKS
Ga0370544_10836_500_670	3300034447	Soil	VVGKPSVFLVESKEEAKQQATTLTRSLGLGVYGFVDKTGASDVQRPGLVPSVGKST

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F068645

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences