Metagenome / Metatranscriptome Family F068613

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F068613
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	45 residues
Representative Sequence	MTARRLGDVCAFVIAAWAFAMLGIEAAAHHGSTHSGTQQVVEVRR
Number of Associated Samples	59
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	82.26 %
% of genes near scaffold ends (potentially truncated)	16.94 %
% of genes from short scaffolds (< 2000 bps)	72.58 %
Associated GOLD sequencing projects	46
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (86.290 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (60.484 % of family members)
Environment Ontology (ENVO)	Unclassified (66.129 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (68.548 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 36.99% β-sheet: 0.00% Coil/Unstructured: 63.01%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF00929	RNase_T	33.87
PF08774	VRR_NUC	19.35
PF04851	ResIII	1.61
PF12684	DUF3799	1.61
PF01844	HNH	1.61
PF08291	Peptidase_M15_3	0.81
PF16778	Phage_tail_APC	0.81
PF03330	DPBB_1	0.81
PF01653	DNA_ligase_aden	0.81
PF13392	HNH_3	0.81
PF12323	HTH_OrfB_IS605	0.81
PF08273	Prim_Zn_Ribbon	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG0272	NAD-dependent DNA ligase	Replication, recombination and repair [L]	0.81
COG4643	Uncharacterized domain associated with phage/plasmid primase	Mobilome: prophages, transposons [X]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.29 %
All Organisms	root	All Organisms	13.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.29 %
Viruses	superkingdom	All Organisms → Viruses	9.68 %
cellular organisms	root	All Organisms → cellular organisms	4.03 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.29 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	8.06 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	4.03 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.29 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	8.06 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3.23 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.29 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	8.06 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	3.23 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.29 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	8.06 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	3.23 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.29 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	3.23 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	2.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.29 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	3.23 %
Siphoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae	2.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.29 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	3.23 %
unclassified Siphoviridae	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae	2.42 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	86.29 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	3.23 %
Synechococcus phage S-CBS2	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Synechococcus phage S-CBS2	2.42 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000401\|BB_Man_B_Liq_inBBDRAFT_1000105	All Organisms → Viruses	13664	Open in IMG/M
3300005527\|Ga0068876_10021262	Not Available	4103	Open in IMG/M
3300005527\|Ga0068876_10154972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1345	Open in IMG/M
3300005527\|Ga0068876_10197265	Not Available	1169	Open in IMG/M
3300005528\|Ga0068872_10196593	Not Available	1153	Open in IMG/M
3300005662\|Ga0078894_10014901	Not Available	6186	Open in IMG/M
3300006802\|Ga0070749_10001523	Not Available	15687	Open in IMG/M
3300006802\|Ga0070749_10018661	Not Available	4413	Open in IMG/M
3300006802\|Ga0070749_10117191	Not Available	1565	Open in IMG/M
3300006802\|Ga0070749_10134133	Not Available	1448	Open in IMG/M
3300006802\|Ga0070749_10258093	Not Available	985	Open in IMG/M
3300006802\|Ga0070749_10337223	Not Available	840	Open in IMG/M
3300006802\|Ga0070749_10564083	Not Available	616	Open in IMG/M
3300006810\|Ga0070754_10275533	Not Available	761	Open in IMG/M
3300006810\|Ga0070754_10511618	Not Available	516	Open in IMG/M
3300006869\|Ga0075477_10045413	Not Available	1971	Open in IMG/M
3300006916\|Ga0070750_10173049	Not Available	968	Open in IMG/M
3300006916\|Ga0070750_10416960	Not Available	558	Open in IMG/M
3300006919\|Ga0070746_10097911	Not Available	1466	Open in IMG/M
3300007344\|Ga0070745_1254934	Not Available	634	Open in IMG/M
3300007346\|Ga0070753_1224349	Not Available	688	Open in IMG/M
3300007538\|Ga0099851_1001436	Not Available	10065	Open in IMG/M
3300007538\|Ga0099851_1074603	Not Available	1310	Open in IMG/M
3300007538\|Ga0099851_1074631	Not Available	1310	Open in IMG/M
3300007538\|Ga0099851_1077385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1283	Open in IMG/M
3300007538\|Ga0099851_1186923	Not Available	758	Open in IMG/M
3300007538\|Ga0099851_1212111	Not Available	702	Open in IMG/M
3300007538\|Ga0099851_1291471	Not Available	577	Open in IMG/M
3300007539\|Ga0099849_1081241	Not Available	1311	Open in IMG/M
3300007541\|Ga0099848_1001965	Not Available	9627	Open in IMG/M
3300007541\|Ga0099848_1018606	Not Available	2987	Open in IMG/M
3300007541\|Ga0099848_1022840	Not Available	2656	Open in IMG/M
3300007541\|Ga0099848_1051161	Not Available	1663	Open in IMG/M
3300007541\|Ga0099848_1150727	Not Available	861	Open in IMG/M
3300007541\|Ga0099848_1168791	Not Available	800	Open in IMG/M
3300007542\|Ga0099846_1082217	Not Available	1197	Open in IMG/M
3300007542\|Ga0099846_1178488	Not Available	756	Open in IMG/M
3300007542\|Ga0099846_1210687	Not Available	683	Open in IMG/M
3300007640\|Ga0070751_1052084	Not Available	1791	Open in IMG/M
3300007640\|Ga0070751_1283585	Not Available	621	Open in IMG/M
3300007960\|Ga0099850_1070921	Not Available	1461	Open in IMG/M
3300007960\|Ga0099850_1379724	Not Available	526	Open in IMG/M
3300007960\|Ga0099850_1385576	Not Available	520	Open in IMG/M
3300007960\|Ga0099850_1392657	Not Available	515	Open in IMG/M
3300007960\|Ga0099850_1411347	Not Available	500	Open in IMG/M
3300008055\|Ga0108970_10893019	Not Available	3278	Open in IMG/M
3300008262\|Ga0114337_1085478	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Synechococcus phage S-CBS2	1514	Open in IMG/M
3300008266\|Ga0114363_1003296	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	8733	Open in IMG/M
3300008266\|Ga0114363_1110818	Not Available	971	Open in IMG/M
3300009000\|Ga0102960_1190114	Not Available	734	Open in IMG/M
3300009059\|Ga0102830_1194083	Not Available	594	Open in IMG/M
3300009450\|Ga0127391_1041105	Not Available	915	Open in IMG/M
3300009492\|Ga0127412_10023106	Not Available	675	Open in IMG/M
3300009911\|Ga0132221_1001203	All Organisms → cellular organisms → Bacteria	1338	Open in IMG/M
3300010296\|Ga0129348_1063581	Not Available	1320	Open in IMG/M
3300010354\|Ga0129333_10004029	Not Available	13761	Open in IMG/M
3300010354\|Ga0129333_10736777	Not Available	845	Open in IMG/M
3300010354\|Ga0129333_10811986	Not Available	797	Open in IMG/M
3300010354\|Ga0129333_11209947	Not Available	627	Open in IMG/M
3300010354\|Ga0129333_11248999	Not Available	615	Open in IMG/M
3300010389\|Ga0136549_10007063	Not Available	7867	Open in IMG/M
3300010389\|Ga0136549_10008982	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	6834	Open in IMG/M
3300010389\|Ga0136549_10113148	Not Available	1261	Open in IMG/M
3300019784\|Ga0181359_1111934	Not Available	987	Open in IMG/M
3300021425\|Ga0213866_10018486	Not Available	4172	Open in IMG/M
3300021964\|Ga0222719_10330935	Not Available	974	Open in IMG/M
3300022057\|Ga0212025_1064975	Not Available	630	Open in IMG/M
3300022063\|Ga0212029_1018381	Not Available	924	Open in IMG/M
3300022063\|Ga0212029_1025446	Not Available	813	Open in IMG/M
3300022176\|Ga0212031_1015078	Not Available	1150	Open in IMG/M
3300022176\|Ga0212031_1021572	Not Available	1005	Open in IMG/M
3300022176\|Ga0212031_1024339	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	957	Open in IMG/M
3300022198\|Ga0196905_1001145	Not Available	10242	Open in IMG/M
3300022198\|Ga0196905_1009542	Not Available	3250	Open in IMG/M
3300022198\|Ga0196905_1011533	Not Available	2904	Open in IMG/M
3300022198\|Ga0196905_1014117	Not Available	2587	Open in IMG/M
3300022198\|Ga0196905_1022255	Not Available	1974	Open in IMG/M
3300022198\|Ga0196905_1038704	Not Available	1398	Open in IMG/M
3300022198\|Ga0196905_1107480	Not Available	740	Open in IMG/M
3300022198\|Ga0196905_1150477	Not Available	599	Open in IMG/M
3300022200\|Ga0196901_1008910	Not Available	4307	Open in IMG/M
3300022200\|Ga0196901_1078606	Not Available	1180	Open in IMG/M
3300022200\|Ga0196901_1133889	Not Available	838	Open in IMG/M
3300022200\|Ga0196901_1245751	Not Available	557	Open in IMG/M
3300025646\|Ga0208161_1013507	Not Available	3286	Open in IMG/M
3300025646\|Ga0208161_1019455	Not Available	2583	Open in IMG/M
3300025646\|Ga0208161_1040427	Not Available	1567	Open in IMG/M
3300025646\|Ga0208161_1096548	Not Available	823	Open in IMG/M
3300025646\|Ga0208161_1113070	Not Available	729	Open in IMG/M
3300025647\|Ga0208160_1013472	Not Available	2715	Open in IMG/M
3300025647\|Ga0208160_1168498	Not Available	518	Open in IMG/M
3300025653\|Ga0208428_1153063	Not Available	616	Open in IMG/M
3300025655\|Ga0208795_1120501	Not Available	683	Open in IMG/M
3300025671\|Ga0208898_1059854	Not Available	1327	Open in IMG/M
3300025674\|Ga0208162_1000913	All Organisms → Viruses	16001	Open in IMG/M
3300025687\|Ga0208019_1094138	Not Available	931	Open in IMG/M
3300025687\|Ga0208019_1110110	Not Available	831	Open in IMG/M
3300025751\|Ga0208150_1029891	Not Available	1904	Open in IMG/M
3300025889\|Ga0208644_1002229	Not Available	15607	Open in IMG/M
3300025889\|Ga0208644_1154130	Not Available	1049	Open in IMG/M
3300025889\|Ga0208644_1212442	Not Available	830	Open in IMG/M
3300025889\|Ga0208644_1233580	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	773	Open in IMG/M
3300027816\|Ga0209990_10055761	Not Available	2002	Open in IMG/M
3300027816\|Ga0209990_10067257	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Synechococcus phage S-CBS2	1788	Open in IMG/M
3300027816\|Ga0209990_10479519	Not Available	529	Open in IMG/M
3300031539\|Ga0307380_10728924	Not Available	830	Open in IMG/M
3300031539\|Ga0307380_10748373	Not Available	815	Open in IMG/M
3300031565\|Ga0307379_10607697	Not Available	1000	Open in IMG/M
3300031566\|Ga0307378_11041776	Not Available	662	Open in IMG/M
3300031578\|Ga0307376_10230425	Not Available	1255	Open in IMG/M
3300031669\|Ga0307375_10504025	Not Available	729	Open in IMG/M
3300031758\|Ga0315907_10010498	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	9211	Open in IMG/M
3300031758\|Ga0315907_10114973	Not Available	2299	Open in IMG/M
3300031784\|Ga0315899_10001253	Not Available	29224	Open in IMG/M
3300031951\|Ga0315904_10892872	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Siphoviridae → unclassified Siphoviridae → Synechococcus phage S-CBS2	718	Open in IMG/M
3300033981\|Ga0334982_0032168	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	2989	Open in IMG/M
3300034061\|Ga0334987_0124373	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	1935	Open in IMG/M
3300034072\|Ga0310127_037794	Not Available	2583	Open in IMG/M
3300034073\|Ga0310130_0001378	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	13356	Open in IMG/M
3300034073\|Ga0310130_0009574	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	3451	Open in IMG/M
3300034073\|Ga0310130_0023731	Not Available	1935	Open in IMG/M
3300034073\|Ga0310130_0092871	Not Available	904	Open in IMG/M
3300034073\|Ga0310130_0193553	Not Available	632	Open in IMG/M
3300034523\|Ga0310143_01009	Not Available	10532	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.19%
Host-Associated	Host-Associated	0.81%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	88.71%
Terrestrial	Environmental → Terrestrial	10.48%
Plants	Host-Associated → Plants	0.81%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	67.74%
Freshwater	Environmental → Aquatic → Freshwater	15.32%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	5.65%
Soil	Environmental → Terrestrial → Soil	4.84%
Sediment	Environmental → Aquatic → Sediment	3.23%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	1.61%
Unclassified	Environmental → Aquatic → Unclassified	0.81%
Leaf	Host-Associated → Plants → Leaf	0.81%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	66.13%
Lentic	Environmental → Aquatic → Freshwater → Lentic	7.26%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	5.65%
Clay	Environmental → Terrestrial → Soil → Clay	4.84%
Lake	Environmental → Aquatic → Freshwater → Lake	4.03%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	3.23%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.23%
Pond	Environmental → Aquatic → Freshwater → Pond	0.81%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.81%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.81%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	0.81%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Unclassified	0.81%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Leaf → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	66.13%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	7.26%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	5.65%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	4.84%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	4.03%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	3.23%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.23%
Unclassified	Environmental → Aquatic → Freshwater → Pond → Unclassified	0.81%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.81%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.81%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	0.81%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Unclassified → Unclassified	0.81%
Unclassified	Environmental → Aquatic → Unclassified → Unclassified → Unclassified	0.81%
Unclassified	Host-Associated → Plants → Leaf → Unclassified → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	60.48%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	7.26%
Fracking Water	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Fracking Water	5.65%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	4.84%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	4.84%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	3.23%
Freshwater, Plankton	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater, Plankton	2.42%
Marine Methane Seep Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Marine Methane Seep Sediment	2.42%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.61%
Meromictic Pond	Environmental → Aquatic → Freshwater → Pond → Unclassified → Meromictic Pond	0.81%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	0.81%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.81%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.81%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	0.81%
Bioluminescent Bay	Environmental → Aquatic → Non-Marine Saline And Alkaline → Unclassified → Unclassified → Bioluminescent Bay	0.81%
Methane Seep	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Methane Seep	0.81%
Meromictic Pond	Environmental → Aquatic → Unclassified → Unclassified → Unclassified → Meromictic Pond	0.81%
Estuary	Host-Associated → Plants → Leaf → Unclassified → Unclassified → Estuary	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000401	Marine microbial community from La Parguera, Puerto Rico - BB Mangrove B Liquid	Environmental	Open in IMG/M
3300005527	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG	Environmental	Open in IMG/M
3300005528	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel1S_2200h metaG	Environmental	Open in IMG/M
3300005662	Freshwater lake microbial communities from Lake Michigan, USA - Su13.BD.MLB.SD (version 4)	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01	Environmental	Open in IMG/M
3300006869	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA	Environmental	Open in IMG/M
3300006916	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24	Environmental	Open in IMG/M
3300006919	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21	Environmental	Open in IMG/M
3300007344	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4	Environmental	Open in IMG/M
3300007346	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_31	Environmental	Open in IMG/M
3300007538	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG	Environmental	Open in IMG/M
3300007539	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG	Environmental	Open in IMG/M
3300007541	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG	Environmental	Open in IMG/M
3300007542	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG	Environmental	Open in IMG/M
3300007640	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28	Environmental	Open in IMG/M
3300007960	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG	Environmental	Open in IMG/M
3300008055	Metatranscriptomes of the Eelgrass leaves and roots. Combined Assembly of Gp0128390, Gp0128391, Gp0128392, and Gp0128393	Host-Associated	Open in IMG/M
3300008262	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE2, Sample E2014-0046-C-NA	Environmental	Open in IMG/M
3300008266	Freshwater microbial communities from Harmful Algal Blooms in Lake Erie, Western Basin, USA - Station WLE12, Sample HABS-E2014-0108-C-NA	Environmental	Open in IMG/M
3300009000	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG	Environmental	Open in IMG/M
3300009059	Estuarine microbial communities from the Columbia River estuary - Freshwater metaG S.703	Environmental	Open in IMG/M
3300009450	Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 1, 4m depth; DNA IDBA-UD	Environmental	Open in IMG/M
3300009492	Marine sediment microbial communities from Chincoteague Deepwater methane seep, US Atlantic Margin - Chincoteague Seep MUC-5 6-8 cmbsf	Environmental	Open in IMG/M
3300009911	Aquatic microbial communities from different depth of meromictic Siders Pond, Falmouth, Massachusetts; Cast 6, surface; RNA IDBA-UD	Environmental	Open in IMG/M
3300010296	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNA	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010389	Marine sediment microbial communities from methane seeps within Baltimore Canyon, US Atlantic Margin - Baltimore Canyon MUC-11 12-14 cmbsf	Environmental	Open in IMG/M
3300019784	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MM15.S.D	Environmental	Open in IMG/M
3300021425	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO284	Environmental	Open in IMG/M
3300021964	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D	Environmental	Open in IMG/M
3300022057	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v2)	Environmental	Open in IMG/M
3300022063	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v2)	Environmental	Open in IMG/M
3300022176	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v2)	Environmental	Open in IMG/M
3300022198	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v3)	Environmental	Open in IMG/M
3300022200	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)	Environmental	Open in IMG/M
3300025646	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025647	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025653	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025655	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025671	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_4 (SPAdes)	Environmental	Open in IMG/M
3300025674	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025687	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025751	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025889	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)	Environmental	Open in IMG/M
3300027816	Freshwater lake microbial communities from Lake Erie, under a cyanobacterial bloom - NOAA_Erie_Diel5S_2200h metaG (SPAdes)	Environmental	Open in IMG/M
3300031539	Soil microbial communities from Risofladan, Vaasa, Finland - UN-3	Environmental	Open in IMG/M
3300031565	Soil microbial communities from Risofladan, Vaasa, Finland - UN-2	Environmental	Open in IMG/M
3300031566	Soil microbial communities from Risofladan, Vaasa, Finland - UN-1	Environmental	Open in IMG/M
3300031578	Soil microbial communities from Risofladan, Vaasa, Finland - TR-2	Environmental	Open in IMG/M
3300031669	Soil microbial communities from Risofladan, Vaasa, Finland - TR-1	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031784	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA112	Environmental	Open in IMG/M
3300031951	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA120	Environmental	Open in IMG/M
3300033981	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011	Environmental	Open in IMG/M
3300034061	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028	Environmental	Open in IMG/M
3300034072	Fracking water microbial communities from deep shales in Oklahoma, United States - MC-3-A	Environmental	Open in IMG/M
3300034073	Fracking water microbial communities from deep shales in Oklahoma, United States - MC-6-XL	Environmental	Open in IMG/M
3300034523	Fracking water microbial communities from deep shales in Oklahoma, United States - K-4-A	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
BB_Man_B_Liq_inBBDRAFT_100010530	3300000401	Bioluminescent Bay	MSRRVSDLCAAVIAAWALAMIGIEAGAHHSPTHSGTQEVMRHD*
Ga0068876_100212627	3300005527	Freshwater Lake	MMTPHRFGDICAALIAAWAFAMLGIEAGAHHSPTHSGTQQVMRHD*
Ga0068876_101549724	3300005527	Freshwater Lake	MMTPRRLGDICSFVIAAWVFAMIGIEAGAHHSPTHSGTQQVVRHD*
Ga0068876_101972653	3300005527	Freshwater Lake	VTTRRLGDVCAFVIAAWAFAMLGIEAAAHHGSTHSGTQPVVEVRK*
Ga0068872_101965935	3300005528	Freshwater Lake	MMTPHRFGDICAALIAAWAFAMLGIEAGAHHSPTHSGTQQVVRHD*
Ga0078894_100149018	3300005662	Freshwater Lake	MTPRRLGDVCSFVIAVWAFAMIGLDVNAHHGRTHSGSQPLVEVKR*
Ga0070749_1000152320	3300006802	Aqueous	MMTPHRLGDICAALIAAWAFAMIGLEVGAHHQPTHSGTQQVVRHD*
Ga0070749_100186617	3300006802	Aqueous	MTAKRVADACAFVIAAWAFAMLGIEAAAHHGSTHSGTQQAVEVRR*
Ga0070749_101171911	3300006802	Aqueous	ISGGLIMTAKRVADACAFVIAAWAFAMLGIEAAAHHGSAHSGTQRVVEVRR*
Ga0070749_101341332	3300006802	Aqueous	MTARRLGDVCAFVIAAWAFAMLGIEAAAHHGSTHSGTQRVVEVRR*
Ga0070749_102580933	3300006802	Aqueous	MMTPNRLGDICAALIAAWAFAMIGIEAGAHHSPTHSGTQEVVRHD*
Ga0070749_103372231	3300006802	Aqueous	MTPRRLGDVCSFVIAAWAFAMIGLDVNAHHGRTHSGSQPVVEVRR*
Ga0070749_105640832	3300006802	Aqueous	MTPNRISNICAAIIAAWAFAMIGIESGAHHQPTHSGTQEYVKHDHD*
Ga0070754_102755332	3300006810	Aqueous	MTARRLGDVCAFVIAAWAFAMLGIEAAAHHGSTHSGTQRVMEVRK*
Ga0070754_105116182	3300006810	Aqueous	MTARRLGDVCAFVIAAWAFAMLGIKAAAHHGSTHSGAQRVVEVRR*
Ga0075477_100454136	3300006869	Aqueous	MTARRLGDVCAFVIAAWAFAMLGIEAAAHHGSTHSGAQRVVEVRR*
Ga0070750_101730493	3300006916	Aqueous	MTARRLGDVCAFVIAAWAFAMLGIEATAHHGSTHSGTQQVVEVRR*
Ga0070750_104169602	3300006916	Aqueous	MTARRLGDVCAFVIAAWAFAMLGIEAAAHHGSTHSGTQQAVEVRR*
Ga0070746_100979113	3300006919	Aqueous	MTARRLGDVCAFVIAAWAFAMLGIEAAAHHGSTHSGTQQVLEVRR*
Ga0070745_12549341	3300007344	Aqueous	AFVIAAWAFAMLGIEAAAHHGSTHSGTQRVVEVRNER*
Ga0070753_12243491	3300007346	Aqueous	MTARRLGDVCAFVIAAWAFAMLGIEAAAHHGSTHSGTQRVVEARNER*
Ga0099851_10014369	3300007538	Aqueous	MTPKRIGDVCAFVIAAWAFAMIGLEVGAHHQPTHSGTQEVVR*
Ga0099851_10746033	3300007538	Aqueous	MTPKRVSDVCAFVIAAWAFAMIGLEVGAHHAPTHSGTQEVVRHD*
Ga0099851_10746313	3300007538	Aqueous	MTPKRIGDVCAFVIAAWAFAMIGLEVGAHHAPTHSGTQEVARHD*
Ga0099851_10773853	3300007538	Aqueous	MNPRVIGDACAFVIAAWAFAMLGIEAAAHHGSTHSGTQPMVEVRK*
Ga0099851_11869231	3300007538	Aqueous	DVWAFVISACALAMLGIEAAAHHGSTHSGTQQAVKVRR*
Ga0099851_12121113	3300007538	Aqueous	MTPRVIGDACAFVIAAWAFAMLGIEAAAHHGSTHSGTQPAVEVRR*
Ga0099851_12914711	3300007538	Aqueous	VTNHISNICAAIIAAWAFAAIGIEAGAHHQPTHSGTQQVVRK*
Ga0099849_10812414	3300007539	Aqueous	MTARRLGDVCALVIAAWAFAMLGIEATAHHGSTHSGTQRVVEVRR*
Ga0099848_100196510	3300007541	Aqueous	MTPKRVSEVCAFVIAAWAFAMIGLEVGAHHAPTHSGTQEVVRHD*
Ga0099848_10186069	3300007541	Aqueous	RLGDVCAFVIAAWAFAMLGIEAAAHHGSTHSGTQRVVEVRNER*
Ga0099848_10228406	3300007541	Aqueous	VTTRRLGDVCAFVIAAWAFAMLGIEAAAHHGSTHSGTQPAVEVRK*
Ga0099848_10511612	3300007541	Aqueous	MTARRLGDVCAFVIAAWAFAMLGIEVAAHHGSTHSGTQPMVEVRK*
Ga0099848_11507272	3300007541	Aqueous	MTARRLGDACAFVIAAWAFAMLGIEAAAHHGSTHSGTQQAVEVRR*
Ga0099848_11687913	3300007541	Aqueous	MNPRVIGDACAFVIAAWAFAMLGIEAAAHHGSTHSGTQPAVEVRR*
Ga0099846_10822173	3300007542	Aqueous	MTARRLGDVCAFVIAAWAFAMLGIEAAAHHGSTHSGTQRVVEVRNER*
Ga0099846_11784883	3300007542	Aqueous	VTARRLGDVCAFVIAAWAFAMLGIEAAAHHGSTHSGTQQVVE
Ga0099846_12106871	3300007542	Aqueous	DVCAFVIAAWAFAMLGIEAAAHHGSTHSGTQPAVEVRK*
Ga0070751_10520841	3300007640	Aqueous	MTARRLGDVCAFVIAAWAFAMLGIEAAAHHGSAHSGTQQVVEVRR*
Ga0070751_12835853	3300007640	Aqueous	VCAFVIAAWAFAMLGIEAAAHHGSTHSGTQRVVEVRNER*
Ga0099850_10709212	3300007960	Aqueous	MTARRLGDVCAFVIAAWAFAMLGIEAAAHNGSTHSGTQRVVEVRR*
Ga0099850_13797241	3300007960	Aqueous	MTARRLGDVCAFVIAAWAFAMLGIEAAAHHGSTHSGTQQVVEVRR*
Ga0099850_13855762	3300007960	Aqueous	RVIGDACAFVIAAWAFAMLGIEAAAHHGSTHSGTQPAVEVRR*
Ga0099850_13926572	3300007960	Aqueous	MTARRLGDACAFVIAAWAFAMLGIEAAAHNGSTHSGTQRVVEVRR*
Ga0099850_14113472	3300007960	Aqueous	MTARRLGDVCAFVIAAWAFAMLGIEAAAHSGSTHSGTQRVVEVRR*
Ga0108970_108930193	3300008055	Estuary	MTPHRLADLCAALIAAWTFAMLGIEVAAHHGPTHSGTQEAVRHD*
Ga0114337_10854784	3300008262	Freshwater, Plankton	MMTPHRLGDICAALIAAWAFAMLGIEAGAHHSPTHSGTQQVMRHD*
Ga0114363_10032964	3300008266	Freshwater, Plankton	LIVTTRRLGDVCAFVIAAWAFAMLGIEAAAHHGSTHSGTQPVVEVRK*
Ga0114363_11108184	3300008266	Freshwater, Plankton	MMTPHRLGDICAALIAAWAFAMLGIEAGAHHSPTHSGTQQVVRHD*
Ga0102960_11901144	3300009000	Pond Water	MKARRLGDLCAALIAAWAFAMLGIEAGAHHGTTHSGTQPVVEVRK*
Ga0102830_11940831	3300009059	Estuarine	RHAGRAHTGSACGGLMMTPHRLGDICAALIAAWAFAMLGIEAGAHHSPTHSGTQQVVRHD
Ga0127391_10411053	3300009450	Meromictic Pond	MTARRLGDVCAFVIAAWAFAMLGIEAGAHHGSTHSGTQRVVEARR*
Ga0127412_100231063	3300009492	Methane Seep	MKARRLGDLCAALIAAWAFAMLGIEAGAHHGSTHSGTQPAVEVRK*
Ga0132221_10012031	3300009911	Meromictic Pond	MTARRLGDVCAFVIAAWAFAMLGIEAGAHHGSTHSGTQPAVEVRR*
Ga0129348_10635814	3300010296	Freshwater To Marine Saline Gradient	MTARRLGDVCAFVIAAWAFAMLGIEAAAHHGSTHSGTQQVVEVRNER*
Ga0129333_100040298	3300010354	Freshwater To Marine Saline Gradient	MMTPKRLGDICAALIAAWAMAMIGIEAGAHHSPTHSGTQEVVRHD*
Ga0129333_107367773	3300010354	Freshwater To Marine Saline Gradient	AHACQAGGGLIVTTRRLGDVCAFVIAAWAFAMLGIEAAAHHGSTHSGTQPVVEVRK*
Ga0129333_108119863	3300010354	Freshwater To Marine Saline Gradient	AGSPCGGLIVTTRRLGDVCAFVIAAWAFAMLGIEAAAHHGSTHSGTQPAVEVRR*
Ga0129333_112099472	3300010354	Freshwater To Marine Saline Gradient	MTPKRIGDVCAFVIAAWAFAMIGLEVGAHHAPTHSGTQEVVR*
Ga0129333_112489993	3300010354	Freshwater To Marine Saline Gradient	MMTPHRLGDICAAVIAAWVFAMIGLEVGAHHAPTHSGTQEVVRHD*
Ga0136549_100070636	3300010389	Marine Methane Seep Sediment	MTPHRLGNICAAVIAAWAFAMIGLEVGAHHSPTHSGTQEVAR*
Ga0136549_1000898216	3300010389	Marine Methane Seep Sediment	MKARRLGDLCAALIAAWAFAMLGIEAGAHHGTTHSGTQPAVEVRK*
Ga0136549_101131482	3300010389	Marine Methane Seep Sediment	MMTARRLGDVCAFVIAAWAFAMLGIEAAAHHGSTHSGTQQVVEVRK*
Ga0181359_11119342	3300019784	Freshwater Lake	MTPRRLGDVCSFVIAVWAFAMIGLDVNAHHGRTHSGSQPLVEVKR
Ga0213866_100184868	3300021425	Seawater	MTAKRVADACAFVIAAWAFAMLGIEAAAHHGSTHSGTQRVVEVRR
Ga0222719_103309353	3300021964	Estuarine Water	MKARRLGDLCAALIAAWAFAMLGIEAGAHHGSTHSGTQPVVEVRK
Ga0212025_10649751	3300022057	Aqueous	MTARRLGDVCAFVIAAWAFAMLGIEAAAHHGSTHSGAQRVVEVRR
Ga0212029_10183812	3300022063	Aqueous	MTPKRVSEVCAFVIAAWAFAMIGLEVGAHHAPTHSGTQEVVRHD
Ga0212029_10254462	3300022063	Aqueous	MNPRVIGDACAFVIAAWAFAMLGIEAAAHHGSTHSGTQPMVEVRK
Ga0212031_10150784	3300022176	Aqueous	VTNHISNICAAIIAAWAFAAIGIEAGAHHQPTHSGTQQVVRK
Ga0212031_10215723	3300022176	Aqueous	VTARRLGDVCAFVIAAWAFAMLGIEAAAHHGSTHSGTQQVVEARR
Ga0212031_10243392	3300022176	Aqueous	MTPKRVSDVCAFVIAAWAFAMIGLEVGAHHAPTHSGTQEVVRHD
Ga0196905_10011459	3300022198	Aqueous	MTPKRIGDVCAFVIAAWAFAMIGLEVGAHHQPTHSGTQEVVR
Ga0196905_10095428	3300022198	Aqueous	MTPKRIGDVCAFVIAAWAFAMIGLEVGAHHAPTHSGTQEVARHD
Ga0196905_10115333	3300022198	Aqueous	VTARRLGDVCAFVIAAWAFAMLGIEAAAHHGSTHSGTQRVVEVRR
Ga0196905_10141177	3300022198	Aqueous	MNPRVIGDACAFVIAAWAFAMLGIEAAAHHGSTHSGTQPAVEVRR
Ga0196905_10222552	3300022198	Aqueous	MTARRLGDVCAFVIAAWAFAMLGIEAAAHHGSTHSGTQQVVEVRR
Ga0196905_10387044	3300022198	Aqueous	MTARRLGDVCAFVIAAWAFAMLGIEVAAHHGSTHSGTQPMVEVRK
Ga0196905_11074801	3300022198	Aqueous	TTRRLGDVCAFVIAAWAFAMLGIEAAAHHGSTHSGTQPAVEVRK
Ga0196905_11504771	3300022198	Aqueous	MTARRLGDACAFVIAAWAFAMLGIEAAAHHGSTHSGTQQAVEVRR
Ga0196901_100891010	3300022200	Aqueous	VTARRLGDVCAFVIAAWAFAMLGIEAAAHHGSTHSGTQQVVEVRR
Ga0196901_10786062	3300022200	Aqueous	MTARRLGDVCAFVIAAWAFAMLGIEATAHHGSTHSGTQRVVEVRR
Ga0196901_11338892	3300022200	Aqueous	MTNHISNICAAIIAAWAFAAIGIEAGAHHQPTHSGTQQVVRK
Ga0196901_12457511	3300022200	Aqueous	VCAFVIAAWAFAMLGIEAAAHHGSTHSGTQQAVEVRR
Ga0208161_10135071	3300025646	Aqueous	LGDVCAFVIAAWAFAMLGIEAAANHGSTHSGTQRVVEVRR
Ga0208161_10194554	3300025646	Aqueous	VTTRRLGDVCAFVIAAWAFAMLGIEAAAHHGSTHSGTQPAVEVRK
Ga0208161_10404272	3300025646	Aqueous	MTARRLGDVCAFVIAAWAFAMLGIEAAAHHGSTHSGAQQVVEVRR
Ga0208161_10965481	3300025646	Aqueous	DVCAFVIAAWAFAMLGIEAAAHHGSTHSGTQRVVEVRNER
Ga0208161_11130702	3300025646	Aqueous	MTARRLGDACAFVIAAWAFAMLGIEAAAHHGSTHSGTQRVVEVRR
Ga0208160_10134724	3300025647	Aqueous	MTARRLGDVCAFVIAAWAFAMLGIEAAAHHGSTHSGTQRVVEVRNER
Ga0208160_11684982	3300025647	Aqueous	MTARRLGDVCAFVIAAWAFAMLGIEAAAHHGSTHSGTQRVVEVRR
Ga0208428_11530633	3300025653	Aqueous	MTARRLGDVCAFVIAAWAFAMLGIEAAAHHGSTHSGTQQAVEVRR
Ga0208795_11205013	3300025655	Aqueous	VTARRLGDVCAFVIAAWAFAMLGIEAAAHHGSTHSGTQRVVEVRNGR
Ga0208898_10598543	3300025671	Aqueous	MTAKRVADACAFVIAAWAFAMLGIEAAAHHGSTHSGTQQAVEVRR
Ga0208162_10009138	3300025674	Aqueous	MTARRLGDVCALVIAAWAFAMLGIEATAHHGSTHSGTQRVVEVRR
Ga0208019_10941381	3300025687	Aqueous	MTARRLGDVCAFVIAAWAFAMLGIEAAAHNGSTHSGTQRVVEVRR
Ga0208019_11101102	3300025687	Aqueous	MTARRLGDACAFVIAAWAFAMLGIEAAAHNGSTHSGTQRVVEVRR
Ga0208150_10298912	3300025751	Aqueous	MTARRLGDVCAFVIAAWAFAMLGIEAAAHHGSTHSGTQRVMEVRK
Ga0208644_10022298	3300025889	Aqueous	MMTPHRLGDICAALIAAWAFAMIGLEVGAHHQPTHSGTQQVVRHD
Ga0208644_11541304	3300025889	Aqueous	MTPNRLANICAAIIAAWAFAMIGIEGAAHHQPTHSGTQEYVKHD
Ga0208644_12124421	3300025889	Aqueous	MMTPNRLGDICAALIAAWAFAMIGIEAGAHHSPTHSGTQEVVRHD
Ga0208644_12335802	3300025889	Aqueous	MTPRRLGDVCSFVIAAWAFAMIGLDVNAHHGRTHSGSQPVVEVRR
Ga0209990_100557612	3300027816	Freshwater Lake	VTTRRLGDVCAFVIAAWAFAMLGIEAAAHHGSTHSGTQPVVEVRK
Ga0209990_100672576	3300027816	Freshwater Lake	LGDICAALIAAWAFAMLGIEAGAHHSPTHSGTQQVMRHD
Ga0209990_104795192	3300027816	Freshwater Lake	MMTPRRLGDICSFVIAAWVFAMIGIEAGAHHSPTHSGTQQVVRHD
Ga0307380_107289243	3300031539	Soil	MGTRRLGDICAAVIAAWALAMIGIEAGAHHSPTHSGTQEVVRHD
Ga0307380_107483732	3300031539	Soil	MNARQIGDLCSLVIAAWAFAMIGIEAGAHHQPTHSGTQEVVR
Ga0307379_106076972	3300031565	Soil	MNARQIGDLCSLVIAAWAFAMIGIEAGAHHQPTHSGTQEVAR
Ga0307378_110417762	3300031566	Soil	MGTRRLGDICAAVIAAWALAMIGIEAGAHHSPTHSGTQEVVR
Ga0307376_102304253	3300031578	Soil	MNARQIGDLCSLVIAAWAFAMIGLEVGAHHQPTHSGTQEVAR
Ga0307375_105040252	3300031669	Soil	MNARQIGDLCSLVIAAWAFAMIGLEVGAHHQPTHSGTQEVVR
Ga0315907_100104985	3300031758	Freshwater	LIVTTRRLGDVCAFVIAAWAFAMLGIEAAAHHGSTHSGTQPVVEVRK
Ga0315907_101149734	3300031758	Freshwater	MMTPHRLGDICAALIAAWAFAMLGIEAGAHHSPTHSGTQQVVRHD
Ga0315899_1000125322	3300031784	Freshwater	MMTPHRFGDICAALIAAWAFAMLGIEAGAHHSPTHSGTQQVMRHD
Ga0315904_108928724	3300031951	Freshwater	FGDICAALIAAWAFAMLGIEAGAHHSPTHSGTQQVMRHD
Ga0334982_0032168_2443_2577	3300033981	Freshwater	MNARQIGDLCSLVIAAWAFAMIGLEVGAHHAPTHSGTQEVVRHD
Ga0334987_0124373_1790_1933	3300034061	Freshwater	GLMMTPHRLGDICAALIAAWAFAMLGIEAGAHHSPTHSGTQQVVRHD
Ga0310127_037794_1589_1726	3300034072	Fracking Water	MNPRVIGDACAYMIAAWAFAMLGIEAAAHHGSTHSGTQPAVEVRR
Ga0310130_0001378_3078_3221	3300034073	Fracking Water	LIVTTRRLGDVCAFVIAAWAFAMLGIEAAAHHGSTHSGTQQVVEVRK
Ga0310130_0009574_2756_2893	3300034073	Fracking Water	MNPRVIGDACAFVIAAWAFAMLGIEAAAHHGSTHSGTQPAVEVRK
Ga0310130_0023731_348_485	3300034073	Fracking Water	MTARRLGDACAFVIAAWAFAMLGIEAAAHHGSTHSGTQPAVEVRR
Ga0310130_0092871_141_284	3300034073	Fracking Water	MTARRLGDVCAFVIAAWAFAMLGIEAGAHHGSTHSGTQQVVEVRNER
Ga0310130_0193553_81_218	3300034073	Fracking Water	MINHISNICAAIIAIWAFAAIGIEAGAHHQPTHSGTQTAIRYDHN
Ga0310143_01009_9871_10005	3300034523	Fracking Water	MNARQIGDLCSLVITAWAFAMIGLEVGAHHAPTHSGTQEVVRHD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F068613

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences