Metagenome / Metatranscriptome Family F068552

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F068552
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	45 residues
Representative Sequence	KGIELILGLISKTVPQAASAKAEDFYDPRFFNELRDSGFLKKLWGEK
Number of Associated Samples	105
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.23 %
% of genes near scaffold ends (potentially truncated)	94.35 %
% of genes from short scaffolds (< 2000 bps)	90.32 %
Associated GOLD sequencing projects	103
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.31

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.387 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (10.484 % of family members)
Environment Ontology (ENVO)	Unclassified (28.226 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (35.484 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 41.33% β-sheet: 0.00% Coil/Unstructured: 58.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.31
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.31
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF02776	TPP_enzyme_N	33.87
PF09084	NMT1	16.13
PF07883	Cupin_2	5.65
PF00557	Peptidase_M24	1.61
PF13379	NMT1_2	1.61
PF02775	TPP_enzyme_C	1.61
PF01243	Putative_PNPOx	1.61
PF13185	GAF_2	0.81
PF06808	DctM	0.81
PF03308	MeaB	0.81
PF04545	Sigma70_r4	0.81
PF04909	Amidohydro_2	0.81
PF02371	Transposase_20	0.81
PF01609	DDE_Tnp_1	0.81
PF04392	ABC_sub_bind	0.81
PF14226	DIOX_N	0.81
PF13531	SBP_bac_11	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	16.13
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	16.13
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.81
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.81
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.81
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.81
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.81
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.81
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.81
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.39 %
Unclassified	root	N/A	1.61 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.39 %
Unclassified	root	N/A	1.61 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.39 %
Unclassified	root	N/A	1.61 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	64.52 %
Unclassified	root	N/A	1.61 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	54.84 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1.61 %
Unclassified	root	N/A	1.61 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	54.84 %
Unclassified	root	N/A	1.61 %
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	0.81 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	54.03 %
Unclassified	root	N/A	1.61 %
Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	0.81 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	53.23 %
Unclassified	root	N/A	1.61 %
Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_57_22	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_57_22	0.81 %
Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459022\|GZEQPF102H87ES	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	539	Open in IMG/M
2209111006\|2214798290	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	715	Open in IMG/M
2228664021\|ICCgaii200_c0841349	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300001976\|JGI24752J21851_1029848	All Organisms → cellular organisms → Bacteria	719	Open in IMG/M
3300002120\|C687J26616_10054679	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1374	Open in IMG/M
3300003892\|Ga0063012_10087053	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	514	Open in IMG/M
3300004022\|Ga0055432_10129183	All Organisms → cellular organisms → Bacteria	687	Open in IMG/M
3300004024\|Ga0055436_10307323	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	513	Open in IMG/M
3300004463\|Ga0063356_101411444	All Organisms → cellular organisms → Bacteria	1025	Open in IMG/M
3300004463\|Ga0063356_102320692	All Organisms → cellular organisms → Bacteria	819	Open in IMG/M
3300005093\|Ga0062594_101094202	All Organisms → cellular organisms → Bacteria	778	Open in IMG/M
3300005218\|Ga0068996_10124573	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	609	Open in IMG/M
3300005294\|Ga0065705_10630253	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	689	Open in IMG/M
3300005330\|Ga0070690_100722710	All Organisms → cellular organisms → Bacteria	766	Open in IMG/M
3300005332\|Ga0066388_100349266	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2125	Open in IMG/M
3300005332\|Ga0066388_105677481	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	631	Open in IMG/M
3300005353\|Ga0070669_101097605	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	685	Open in IMG/M
3300005356\|Ga0070674_100184552	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1600	Open in IMG/M
3300005364\|Ga0070673_101840853	All Organisms → cellular organisms → Bacteria → Proteobacteria	574	Open in IMG/M
3300005446\|Ga0066686_10103242	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1839	Open in IMG/M
3300005446\|Ga0066686_10812114	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	621	Open in IMG/M
3300005471\|Ga0070698_100635624	All Organisms → cellular organisms → Bacteria	1008	Open in IMG/M
3300005518\|Ga0070699_102056174	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	522	Open in IMG/M
3300005543\|Ga0070672_101919577	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	533	Open in IMG/M
3300005546\|Ga0070696_100538341	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300005552\|Ga0066701_10005443	All Organisms → cellular organisms → Bacteria	5286	Open in IMG/M
3300005577\|Ga0068857_102565894	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	500	Open in IMG/M
3300005875\|Ga0075293_1015348	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	925	Open in IMG/M
3300005937\|Ga0081455_10597040	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	720	Open in IMG/M
3300006049\|Ga0075417_10107539	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1270	Open in IMG/M
3300006844\|Ga0075428_100123706	All Organisms → cellular organisms → Bacteria	2815	Open in IMG/M
3300006847\|Ga0075431_101255260	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300006853\|Ga0075420_100830267	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	796	Open in IMG/M
3300006854\|Ga0075425_101485541	All Organisms → cellular organisms → Bacteria	765	Open in IMG/M
3300006914\|Ga0075436_100052067	All Organisms → cellular organisms → Bacteria	2825	Open in IMG/M
3300006914\|Ga0075436_100152274	All Organisms → cellular organisms → Bacteria	1628	Open in IMG/M
3300009100\|Ga0075418_12543895	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	559	Open in IMG/M
3300009137\|Ga0066709_103320225	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	585	Open in IMG/M
3300009147\|Ga0114129_12267599	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	652	Open in IMG/M
3300009162\|Ga0075423_11024318	All Organisms → cellular organisms → Bacteria	877	Open in IMG/M
3300009174\|Ga0105241_12677471	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	502	Open in IMG/M
3300009177\|Ga0105248_13099975	All Organisms → cellular organisms → Bacteria → Proteobacteria	529	Open in IMG/M
3300009691\|Ga0114944_1302941	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300010029\|Ga0105074_1041007	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	805	Open in IMG/M
3300010043\|Ga0126380_11707114	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300010047\|Ga0126382_11626930	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	600	Open in IMG/M
3300010358\|Ga0126370_10123715	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1838	Open in IMG/M
3300010358\|Ga0126370_12144745	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	549	Open in IMG/M
3300010362\|Ga0126377_10143045	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2239	Open in IMG/M
3300010362\|Ga0126377_10663650	All Organisms → cellular organisms → Bacteria	1093	Open in IMG/M
3300010362\|Ga0126377_10946231	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	926	Open in IMG/M
3300010362\|Ga0126377_13417394	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	513	Open in IMG/M
3300010375\|Ga0105239_10941200	All Organisms → cellular organisms → Bacteria	992	Open in IMG/M
3300010376\|Ga0126381_102676216	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	713	Open in IMG/M
3300010398\|Ga0126383_11432919	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium RIFCSPLOWO2_12_FULL_57_22	780	Open in IMG/M
3300010399\|Ga0134127_10361957	All Organisms → cellular organisms → Bacteria	1421	Open in IMG/M
3300010400\|Ga0134122_10112742	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2168	Open in IMG/M
3300012039\|Ga0137421_1032244	All Organisms → cellular organisms → Bacteria	1356	Open in IMG/M
3300012039\|Ga0137421_1167299	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	650	Open in IMG/M
3300012039\|Ga0137421_1236167	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	531	Open in IMG/M
3300012040\|Ga0137461_1188190	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	607	Open in IMG/M
3300012202\|Ga0137363_11208293	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	642	Open in IMG/M
3300012209\|Ga0137379_11027647	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	729	Open in IMG/M
3300012401\|Ga0134055_1359382	Not Available	1440	Open in IMG/M
3300012685\|Ga0137397_10259288	All Organisms → cellular organisms → Bacteria	1295	Open in IMG/M
3300012685\|Ga0137397_10344583	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1110	Open in IMG/M
3300012685\|Ga0137397_10580447	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300012882\|Ga0157304_1071176	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300012922\|Ga0137394_10247021	All Organisms → cellular organisms → Bacteria	1525	Open in IMG/M
3300012931\|Ga0153915_10538011	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1338	Open in IMG/M
3300012931\|Ga0153915_11621542	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17	757	Open in IMG/M
3300012948\|Ga0126375_10002886	All Organisms → cellular organisms → Bacteria → Proteobacteria	6079	Open in IMG/M
3300012971\|Ga0126369_11343926	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	805	Open in IMG/M
3300012971\|Ga0126369_12334654	All Organisms → cellular organisms → Bacteria → Proteobacteria	621	Open in IMG/M
3300012977\|Ga0134087_10644342	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	554	Open in IMG/M
3300014268\|Ga0075309_1203042	All Organisms → cellular organisms → Bacteria	525	Open in IMG/M
3300014270\|Ga0075325_1229365	All Organisms → cellular organisms → Bacteria	508	Open in IMG/M
3300014861\|Ga0180061_1055424	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	656	Open in IMG/M
3300015053\|Ga0137405_1403425	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2368	Open in IMG/M
3300015245\|Ga0137409_10118206	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2444	Open in IMG/M
3300015373\|Ga0132257_100893502	All Organisms → cellular organisms → Bacteria	1113	Open in IMG/M
3300015373\|Ga0132257_102086363	All Organisms → cellular organisms → Bacteria → Proteobacteria	732	Open in IMG/M
3300015374\|Ga0132255_100672752	All Organisms → cellular organisms → Bacteria	1535	Open in IMG/M
3300015374\|Ga0132255_102102635	All Organisms → cellular organisms → Bacteria	860	Open in IMG/M
3300016270\|Ga0182036_10328192	All Organisms → cellular organisms → Bacteria	1172	Open in IMG/M
3300016445\|Ga0182038_10196031	All Organisms → cellular organisms → Bacteria	1585	Open in IMG/M
3300018054\|Ga0184621_10193558	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	729	Open in IMG/M
3300018064\|Ga0187773_10709535	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	629	Open in IMG/M
3300018064\|Ga0187773_11171662	All Organisms → cellular organisms → Bacteria → Proteobacteria	515	Open in IMG/M
3300018066\|Ga0184617_1047159	All Organisms → cellular organisms → Bacteria	1084	Open in IMG/M
3300018075\|Ga0184632_10330438	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	656	Open in IMG/M
3300018084\|Ga0184629_10436586	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	686	Open in IMG/M
3300018084\|Ga0184629_10683814	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	518	Open in IMG/M
3300019878\|Ga0193715_1070775	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	732	Open in IMG/M
3300019889\|Ga0193743_1256479	All Organisms → cellular organisms → Bacteria	506	Open in IMG/M
3300022534\|Ga0224452_1283925	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	505	Open in IMG/M
3300025160\|Ga0209109_10018362	All Organisms → cellular organisms → Bacteria → Proteobacteria	3767	Open in IMG/M
3300025313\|Ga0209431_10088316	Not Available	2433	Open in IMG/M
3300025319\|Ga0209520_10556861	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	665	Open in IMG/M
3300025322\|Ga0209641_10249032	All Organisms → cellular organisms → Bacteria	1321	Open in IMG/M
3300025324\|Ga0209640_10202095	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1688	Open in IMG/M
3300025326\|Ga0209342_10326755	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1324	Open in IMG/M
3300025905\|Ga0207685_10097699	All Organisms → cellular organisms → Bacteria	1249	Open in IMG/M
3300025937\|Ga0207669_10568648	All Organisms → cellular organisms → Bacteria	917	Open in IMG/M
3300025939\|Ga0207665_10448870	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	989	Open in IMG/M
3300026066\|Ga0208290_1028821	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	607	Open in IMG/M
3300026298\|Ga0209236_1107444	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1247	Open in IMG/M
3300026323\|Ga0209472_1239212	All Organisms → cellular organisms → Bacteria → Proteobacteria	584	Open in IMG/M
3300026324\|Ga0209470_1048227	All Organisms → cellular organisms → Bacteria	2066	Open in IMG/M
3300026529\|Ga0209806_1274224	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	567	Open in IMG/M
3300027378\|Ga0209981_1009548	All Organisms → cellular organisms → Bacteria	1328	Open in IMG/M
3300027840\|Ga0209683_10216849	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	879	Open in IMG/M
3300027874\|Ga0209465_10053417	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1936	Open in IMG/M
3300028802\|Ga0307503_10494065	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	658	Open in IMG/M
3300031719\|Ga0306917_11206099	All Organisms → cellular organisms → Bacteria → Proteobacteria	587	Open in IMG/M
3300031854\|Ga0310904_11184802	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	550	Open in IMG/M
3300031941\|Ga0310912_10526979	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	921	Open in IMG/M
3300031941\|Ga0310912_10582042	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300031942\|Ga0310916_10736357	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300031949\|Ga0214473_11238808	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	770	Open in IMG/M
3300032179\|Ga0310889_10465323	All Organisms → cellular organisms → Bacteria → Proteobacteria	637	Open in IMG/M
3300033813\|Ga0364928_0008030	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1904	Open in IMG/M
3300034148\|Ga0364927_0092882	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	832	Open in IMG/M
3300034150\|Ga0364933_066618	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	897	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.61%
Host-Associated	Host-Associated	23.39%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	61.29%
Plants	Host-Associated → Plants	23.39%
Aquatic	Environmental → Aquatic	15.32%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	58.87%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.52%
Sediment	Environmental → Aquatic → Sediment	8.87%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.87%
Freshwater	Environmental → Aquatic → Freshwater	2.42%
Marine	Environmental → Aquatic → Marine	2.42%
Floodplain	Environmental → Terrestrial → Floodplain	2.42%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.61%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.94%
Loam	Environmental → Terrestrial → Soil → Loam	11.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	8.87%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.84%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.03%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.03%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.42%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.42%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	2.42%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.61%
Sand	Environmental → Terrestrial → Soil → Sand	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	26.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.48%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	8.87%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	7.26%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.84%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.84%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.84%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.84%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	4.03%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.03%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.03%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.42%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.42%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.42%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	2.42%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	1.61%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.61%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.81%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.81%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.48%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.06%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.45%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	5.65%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	4.03%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.03%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.03%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	4.03%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.03%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.23%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.42%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.42%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	2.42%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	2.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.42%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.61%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.61%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.61%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.61%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.61%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.81%
Thermal Springs	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Thermal Springs	0.81%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring Sediment	0.81%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.81%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.81%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.81%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.81%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.81%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.81%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.81%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459022	Grass soil microbial communities from Rothamsted Park, UK - FA2 (control condition)	Environmental	Open in IMG/M
2209111006	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0	Host-Associated	Open in IMG/M
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001976	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S7	Host-Associated	Open in IMG/M
3300002120	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_2	Environmental	Open in IMG/M
3300003892	Hot spring sediment microbial communities from Chocolate Pots, Yellowstone National Park, Wyoming that are Fe(III) reducing - CP Core 2, 1cm	Environmental	Open in IMG/M
3300004022	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D1	Environmental	Open in IMG/M
3300004024	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005218	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_ThreeSqC_D2	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005875	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_25C_0N_101	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009691	Hot spring microbial communities from Beatty, Nevada to study Microbial Dark Matter (Phase II) - OV2 TP2	Environmental	Open in IMG/M
3300010029	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012039	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT534_2	Environmental	Open in IMG/M
3300012040	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT746_2	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012401	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012882	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014268	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNE_CattailA_D1	Environmental	Open in IMG/M
3300014270	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberrySE_CattailA_D1	Environmental	Open in IMG/M
3300014861	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT27_16_10D	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300018066	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300019889	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2c2	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300025160	Soil microbial communities from Rifle, Colorado, USA - sediment 10ft 2	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300025319	Soil microbial communities from Rifle, Colorado, USA - sediment 16ft 1	Environmental	Open in IMG/M
3300025322	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_1 (SPAdes)	Environmental	Open in IMG/M
3300025324	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)	Environmental	Open in IMG/M
3300025326	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 16_2 (SPAdes)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026066	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailB_D1 (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300027378	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes)	Host-Associated	Open in IMG/M
3300027840	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare2Fresh (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028802	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300033813	Sediment microbial communities from East River floodplain, Colorado, United States - 30_j17	Environmental	Open in IMG/M
3300034148	Sediment microbial communities from East River floodplain, Colorado, United States - 18_j17	Environmental	Open in IMG/M
3300034150	Sediment microbial communities from East River floodplain, Colorado, United States - 25_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FA2_07868330	2170459022	Grass Soil	FIGKTVPQAATTKPEDFYDPRFFNDLRESGFLKKLWGDKL
2213826697	2209111006	Arabidopsis Rhizosphere	TAMEKTLQVDPKGLELILEFIGKTVPQAASTKPEDFYDPRFFNDLRESGFLKKLWGDKL
ICCgaii200_08413492	2228664021	Soil	QKGLELILEFIAKTVPQAASAKVEDFYDPRFTNELRNSGFLKQLWGDKL
JGI24752J21851_10298482	3300001976	Corn, Switchgrass And Miscanthus Rhizosphere	MEKTLQIDPKGLELILEFIGKTVPQAASAKPEDFYDSRFVNDLRTSGLLKKLWGDKL*
C687J26616_100546791	3300002120	Soil	SKTVPQAASARPEDFYDPRFFNELKDSEFLKRLWGN*
Ga0063012_100870531	3300003892	Hot Spring Sediment	DRALVVDPEGISFVLGQIKKTVPQAASAKPEDFFDPRFFTELQKSGFLKSLWGEH*
Ga0055432_101291831	3300004022	Natural And Restored Wetlands	VERTLQIDPKGIELILTLMSKSMPQATSAKNEEFYDSRFTNELRDSGFLKRLWVEK*
Ga0055436_103073232	3300004024	Natural And Restored Wetlands	TLMSKSMPQGPSVKTEEFYDSRFTNELRDSGFLKKLWGDKL*
Ga0063356_1014114443	3300004463	Arabidopsis Thaliana Rhizosphere	LIAKSVPQAAAARPQDFFDSRFTADLRESGFLKRVWGETP*
Ga0063356_1023206921	3300004463	Arabidopsis Thaliana Rhizosphere	ILEFIAKTVPQAASAKVEDFYDPRFTNELRNSGFLKQLWGDKL*
Ga0062594_1010942021	3300005093	Soil	LLLGFIAKTVPQAGSAKAEEFYDPRFTNDLRESGFLKKLWGEKS*
Ga0068996_101245731	3300005218	Natural And Restored Wetlands	LMSKSMPQGPSVKTEEFYDPRFTNELRDSGFLKKLWGER*
Ga0065705_106302532	3300005294	Switchgrass Rhizosphere	LALISKTVPQAASAKAEDFYDARFYTELRESGFLKKLWGEKP*
Ga0070690_1007227101	3300005330	Switchgrass Rhizosphere	IGKTVPQAASAKPEDFYDSRFVNDLRTSGLLKKLWGDKL*
Ga0066388_1003492661	3300005332	Tropical Forest Soil	KGIELILGLISKSVPQASSAKPADFYDPRFFNELRESGFLKRLWGDKL*
Ga0066388_1056774812	3300005332	Tropical Forest Soil	VERTLQVAPKGIELILGLISKSVPQAASAKAQDFYDPHFFTELRDSGFLKKLWGEQ*
Ga0070669_1010976051	3300005353	Switchgrass Rhizosphere	KTLRVDPKGVELLLGFIAKTVPQAGSAKAEEFYDPRFTNDLRESGFLKKLWGEKS*
Ga0070674_1001845521	3300005356	Miscanthus Rhizosphere	EFVGKSMPQSPSAKVEEFYDPRFTNELRNSGFLKQLWGEKL*
Ga0070673_1018408532	3300005364	Switchgrass Rhizosphere	PKGVELLLGFIAKTVPQAGSAKPEEFYDPRFTNDLRESGFLKKLWGNKL*
Ga0066686_101032423	3300005446	Soil	LWDPKGIELILGLIGKTVPQAASAKPEDFYVPRFFTELRDSGFLK
Ga0066686_108121141	3300005446	Soil	KGIELILGLIGKTVPQAASAKAEDFYDTRFTADLKDSGFLKRLWGEK*
Ga0070698_1006356241	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	VDPKGLELILGLIGKTVPQAASTKPEDFYDPRFTNDLRDSGFLKKLWGENL*
Ga0070699_1020561742	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	KGIELVLGLISKTVPQAASAKPEDFYDARFFTELKDSGFLKRLWGEN*
Ga0070672_1019195771	3300005543	Miscanthus Rhizosphere	MEKTLQVDPKGLELILEFIGKTVPQAASTKPEDFYDPRFFNDLRESGFLKKLWGDKL*
Ga0070696_1005383412	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	ILGFIGKTVPQAASAKPEDFYDPRFTNELRDSGFLKKLWGDK*
Ga0066701_100054431	3300005552	Soil	QVEPKGIELILGLIGKTVPQAASAKAEDFYDTRFTADLKDSGFLKRLWGEK*
Ga0068857_1025658941	3300005577	Corn Rhizosphere	LQVDPKGIELILGLIGKSVSPGATARPQDFYDSRFSAELKDSGFLKRLWGETL*
Ga0075293_10153481	3300005875	Rice Paddy Soil	LILGLISKAVPQAASAKAEDFYDPRFFSELRDSGFLKKLWGNKL*
Ga0081455_105970401	3300005937	Tabebuia Heterophylla Rhizosphere	TPQATSAKAQDFYDPRFFNELRDSGFLKKLWAEK*
Ga0075417_101075391	3300006049	Populus Rhizosphere	LELILSLIGKTVPQAAATKPEDFYDPRFTNELRDSGFLKKLWGEK*
Ga0075428_1001237064	3300006844	Populus Rhizosphere	VPQAASAKAEDFYDARFYTELRESGFLKRLWGEKP*
Ga0075431_1012552603	3300006847	Populus Rhizosphere	ELILALISKTVPQAASAKAEDFYDARFYNELRDSGFLKRLWGEKP*
Ga0075420_1008302671	3300006853	Populus Rhizosphere	LISKTVPQAASAKAEDFYDPRFFNELRDSGFLKKLWGEQ*
Ga0075425_1014855412	3300006854	Populus Rhizosphere	LALISKTVPQAASAKAEDFYDARFYTELRESGFLKRLWGEKP*
Ga0075436_1000520674	3300006914	Populus Rhizosphere	ELILGLISKSVPQAVSAKAQDFYDPRFFTELRDSGFLKRLWGDKA*
Ga0075436_1001522741	3300006914	Populus Rhizosphere	AKTVPQAGSAKAEEFYDPRFTNDLRESGFLKKLWGEKS*
Ga0075418_125438951	3300009100	Populus Rhizosphere	TVPQAASAKAEDFYDARFYNELRDSGFLKRLWGEKP*
Ga0066709_1033202252	3300009137	Grasslands Soil	VPQAASAKAEDFYDTRFTADLKDSGFLKRLWGEK*
Ga0114129_122675991	3300009147	Populus Rhizosphere	TVPQAASAKAEDFYDPRFFNELRDSGFLKKLWAEK*
Ga0075423_110243181	3300009162	Populus Rhizosphere	ELILGLISKAVPQATSAKPEEFYDPRFFTELKESGFLKKLWGEN*
Ga0105241_126774712	3300009174	Corn Rhizosphere	LGLISKTVPQATSAKSEDFYDARFFSELKETGFLKTLWREN*
Ga0105248_130999751	3300009177	Switchgrass Rhizosphere	KTLQVDPKGLELILEFVGKSMPQSPSAKVEEFYDPRFTNELRNSGFLKQLWGEKL*
Ga0114944_13029411	3300009691	Thermal Springs	PKGIELILEVISKTVPQAASAKPEDFYDSRFFTELKESGLLKRLWGER*
Ga0105074_10410072	3300010029	Groundwater Sand	VPQAASAKAEDFYDPRFFTELRDSGFLKKLWAEK*
Ga0126380_117071142	3300010043	Tropical Forest Soil	ILTLISKTVPQAASAKAEDFYDARFYTELRDSGFLKRLWGDKP*
Ga0126382_116269301	3300010047	Tropical Forest Soil	LQVDAKGLDLILGFISKTVPQAASAKPEDFYDPRFTNELRESGFLKKLWGEKL*
Ga0126370_101237151	3300010358	Tropical Forest Soil	LILGLISKSVPQAASAKPEDFYDARFFTELKDSGFLKRVWAEN*
Ga0126370_121447452	3300010358	Tropical Forest Soil	VERTLQVAPKGIELILGLISKSVPQAASAKAQDFYDPHFFTELRDSGFL
Ga0126377_101430455	3300010362	Tropical Forest Soil	LISKTTPQAASAKAQDFYDPRFFTELRNSGFLKKLWAEK*
Ga0126377_106636503	3300010362	Tropical Forest Soil	LISKTVPQAASAKAEDFYDARFYTELRDSGFLKRLWGEKP*
Ga0126377_109462311	3300010362	Tropical Forest Soil	NRTAPQPFSAKPEDFYDARFTNDLRDSGFLKKLWGDK*
Ga0126377_134173941	3300010362	Tropical Forest Soil	LISKSVPQAASAKAQDFYDPRFFNELRDSGFLKKLWGEQ*
Ga0105239_109412001	3300010375	Corn Rhizosphere	KTVPQATSAKSEDFYDARFFSELKETGFLKTLWREN*
Ga0126381_1026762161	3300010376	Tropical Forest Soil	AVQRSLEVDPKGVELILGLISKSVPQAASAKPEDFYDARFFTELKDSGFLKRVWAEN*
Ga0126383_114329191	3300010398	Tropical Forest Soil	GIDLILGIIAKTVPQAASAKVEDFYDPRFSNELRESGFLKKLWGEK*
Ga0134127_103619572	3300010399	Terrestrial Soil	DPKGVELLLGFIAKTVPQAGSAKAEEFYDPRFTNDLRESGFLKKLWGEKS*
Ga0134122_101127421	3300010400	Terrestrial Soil	GLELILAFIAKTVPQAAIAKSEDFHDPRFTNEMKDSGYLKRLWGEN*
Ga0137421_10322441	3300012039	Soil	VPQAASAKAEDFYDARFYTELRDSGFLKKLWGEKP*
Ga0137421_11672991	3300012039	Soil	VDPKDIELILGLIANSLLQAPSARAQDFYDSRFSADLRDSGFLKRLWGES*
Ga0137421_12361672	3300012039	Soil	LVWIKHGIELILGLIGKSVPQAATARPQDFYDSRFTTDLRDSGFLKRLWGEAL*
Ga0137461_11881901	3300012040	Soil	DPKGIELILGLIAKSVPQAASARAQDFYDSRFSADLKDSGFLKRLWGES*
Ga0137363_112082932	3300012202	Vadose Zone Soil	ILGLIAKTVPQAASAKPEDFYDPRFFAELRDSGFLKGLWGEK*
Ga0137379_110276472	3300012209	Vadose Zone Soil	QVDPKGLELILSLIGKTVPQAAATKPEDFYDPRFTNELRDSGFLNKLWGEKL*
Ga0134055_13593823	3300012401	Grasslands Soil	GKTVPQAASAKPEDFYVPRFFTELRDSGFLKRLWGES*
Ga0137397_102592881	3300012685	Vadose Zone Soil	TVPQAASAKPEDFYDARFYTELRDSGFLKRLWGEKP*
Ga0137397_103445831	3300012685	Vadose Zone Soil	DPKGIELILGLIGKTVPQAASAKAEDFYDLRFTTELRESGFLKRLWGEKL*
Ga0137397_105804471	3300012685	Vadose Zone Soil	TVPQAASTKPEDFYDPRFFNDLRESGFLKKLWGDKL*
Ga0157304_10711761	3300012882	Soil	DPKGLELILEFIGKTVPQAASAKPEDFYDSRFVNDLRTSGLLKKLWGDKL*
Ga0137394_102470211	3300012922	Vadose Zone Soil	PQAASAKAEDFYDARFYTELRDSGFLKRLWGEKP*
Ga0153915_105380111	3300012931	Freshwater Wetlands	ILGLIGKTVPQAASAKPEEFYDSRFFTELKDSGFLKRLWGEH*
Ga0153915_116215422	3300012931	Freshwater Wetlands	ELILGLIGKTVPQAASAKPEEFYDSRFFTELKDSGFLKRLWGEN*
Ga0126375_100028867	3300012948	Tropical Forest Soil	MEKTLQIDPKGIDLILGIIAKTVPQAASAKVEDFYDPRFSNELRDSGFLKKLWGEN*
Ga0126369_113439263	3300012971	Tropical Forest Soil	ILTLISKTVPQAASAKTEDFYDARFYTELRDSGFLKRLWGEKP*
Ga0126369_123346542	3300012971	Tropical Forest Soil	KGLELILEFIAKTVPQAASAKPEDFYDSRFINDLRGSGFLKKLWGEKL*
Ga0134087_106443421	3300012977	Grasslands Soil	GKTVPQAAATKPEDFYDPRFTNELRDSGFLKKLWGEKL*
Ga0075309_12030421	3300014268	Natural And Restored Wetlands	KGIELILGLIRKTVPQAASAKAEDFYDARFFTELRESGFLKRLKGEKS*
Ga0075325_12293652	3300014270	Natural And Restored Wetlands	LQVDPKGIELVLGLIRKTVPQAASAKADDFYDARFFTELRESGFLKRLKGEKS*
Ga0180061_10554241	3300014861	Soil	LIAKSVPQAAAARPQDFYDSRFTADLRDSGFLKRLWGEAL*
Ga0137405_14034253	3300015053	Vadose Zone Soil	LISKTVPQAASAKPEDFYDARFYTELRDSGFLKRLWGEKP*
Ga0137409_101182061	3300015245	Vadose Zone Soil	MAVERTLQVDPKGIELILGLISKTVPQAASAKAEDFYDPRFFN
Ga0132257_1008935021	3300015373	Arabidopsis Rhizosphere	TLRVDPKGVELLLGFIAKTVPQAGSAKPEEFYDPRFTNDLRESGFLKKLWGNKL*
Ga0132257_1020863632	3300015373	Arabidopsis Rhizosphere	TLRVDPKGVELLLGFIAKTVPQAGSAKPEEFYDPRFTNDLRDSGFLKKLWG*
Ga0132255_1006727521	3300015374	Arabidopsis Rhizosphere	LLGFIAKTVPQAGSAKPEEFYDPRFTNDLRDSGFLKKLWG*
Ga0132255_1021026352	3300015374	Arabidopsis Rhizosphere	QVDPKGLELILEFIGKTVPQAASTKPEDFYDPRFFNDLRESGFLKKLWGDKL*
Ga0182036_103281922	3300016270	Soil	ELLLGFIGKTVPQAASAKLEDFYDPRFTNDLRDSGFLKKLWGEKL
Ga0182038_101960311	3300016445	Soil	DPKGVELLLGFIGKTVPQAASAKLEDFYDPRFTNDLRDSGFLKKLWGEKL
Ga0184621_101935581	3300018054	Groundwater Sediment	RTLQVDPKWIELILALISKTVPQAASAKPEDFYDARFYTELRDSGFLKRLWGEKP
Ga0187773_107095351	3300018064	Tropical Peatland	IGKTVPQAASAKPEDFYDPRFFNELRDSGFLKKLWGEK
Ga0187773_111716621	3300018064	Tropical Peatland	NPKGLEQILAFIAKTVPQAASAKPEDFYDLRFTNELRDSGFLKRLWGES
Ga0184617_10471592	3300018066	Groundwater Sediment	ILGLISKSLPQAASAKPQDFYDPRFAAELRDSGFLKRLWGAKL
Ga0184632_103304382	3300018075	Groundwater Sediment	PKGIELILGLISKSVPQAASAKPEDFYDPRFFNELRDSGFLKKLWGEKY
Ga0184629_104365861	3300018084	Groundwater Sediment	KDIELILGLIANSLLQAPSARAQDFYDSRFSADLRDSGFLKRLWGES
Ga0184629_106838141	3300018084	Groundwater Sediment	TLQVDSKGVELILGFIGNTVPQAASAKPEDFYDPRFTNDLRDSGFLKRLWGEK
Ga0193715_10707752	3300019878	Soil	PKGIELILALIGKTVPQAASAKAEDFYDARFTTELRDSGFLKKLWGDKL
Ga0193743_12564791	3300019889	Soil	LILGLISKSLPQAASAKPQDFYDPRFAAELRDSGFLKRLWGDKL
Ga0224452_12839252	3300022534	Groundwater Sediment	ILALINKSMPLAHSVKTEEFYDSRFTNELRDSGFLKRLWGEKL
Ga0209109_100183624	3300025160	Soil	SKTVPQAASARPEDFYDPRFFNELKDSEFLKRLWGN
Ga0209431_100883163	3300025313	Soil	MSKSLPQAASAKPEDFYDPRFFTDLRDSGFLKKLWGDKL
Ga0209520_105568611	3300025319	Soil	LMSKSLPQAASAKPEDFYDPRFFTDLRDSGFLKKLWGDKL
Ga0209641_102490321	3300025322	Soil	SKSLPQAASAKPEDFYDPRFFTDLRDSGFLKKLWGDKL
Ga0209640_102020951	3300025324	Soil	PKGIELILGLMSKSMPQAASAKPEDFYDPRFFTDLRDSGFLKKLWGEK
Ga0209342_103267553	3300025326	Soil	IKGKIPQAATAKAEEFYDPRFFTELRESGFLKSLWGEN
Ga0207685_100976992	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	AMEKTLRVDPKGVELLLGFIAKTVPQAGSAKPEEFYDPRFTNDLRESGFLKKLWGNKL
Ga0207669_105686483	3300025937	Miscanthus Rhizosphere	EFIGKTVPQAASAKPEDFYDSRFVNDLRTSGLLKKLWGDKL
Ga0207665_104488702	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	ILALIGKTVPQAASAKAEDFYDARFTTELRDSGFLKKLWGDKL
Ga0208290_10288213	3300026066	Natural And Restored Wetlands	LGLISKAVPQAASAKAEDFYDPRFFSELRDSGFLKKLWGNKP
Ga0209236_11074441	3300026298	Grasslands Soil	TVPQAASAKAEDFYDTRFTADLKDSGFLKRLWGEK
Ga0209472_12392121	3300026323	Soil	LQVDPKGIDLILGLIGKTVPQAASAKPEDFFDARFTTELRDSGFLKRLWGDKL
Ga0209470_10482271	3300026324	Soil	SLIGKTVPQAAATKPEDFYDRRFTNELRDSGFLKKLWGEKL
Ga0209806_12742241	3300026529	Soil	GKTVPQAASAKPEDFFDARFTTELRDSGFLKRLWGDKL
Ga0209981_10095482	3300027378	Arabidopsis Thaliana Rhizosphere	PKGIELILGLISKSVPQAASAKAEDFYDPRFFTELRDSGFLKKLWGDKL
Ga0209683_102168492	3300027840	Wetland Sediment	KSMPQAISAKPEDFYDPRFSNDLRDSAFLKKLWGEK
Ga0209465_100534173	3300027874	Tropical Forest Soil	VERTLQVAPKGIELILGLISKSVPQAASAKAQDFYDPHFFTELRDSG
Ga0307503_104940651	3300028802	Soil	GKSVPQAASAKPEDFYDGRFTNELKDSGFLKRLWGEN
Ga0306917_112060991	3300031719	Soil	KTLQVDPKGVELLLGFIGKTVPQAASAKLEDFYDPRFTNDLRDSGFLKKLWGEKL
Ga0310904_111848022	3300031854	Soil	KGIELILGLISKSVPQAGSAKAQDFYDPRFVNELRDSGFLKKLWADK
Ga0310912_105269791	3300031941	Soil	VDPKGVELILGLISKTVPQAASAKPEDFYDARFFTELKDSGFLKRLWGEN
Ga0310912_105820421	3300031941	Soil	TLQVDPKGVELLLGFIGKTVPQAASAKLEDFYDPRFTNDLRDSGFLKKLWGEKL
Ga0310916_107363571	3300031942	Soil	VELLLGFIGKTVPQAASAKLEDFYDPRFTNDLRDSGFLKKLWGEKL
Ga0214473_112388081	3300031949	Soil	ILGLMSKSLPQAASAKPEDFYDPRFFTDLRDSGFLKKLWGDKL
Ga0310889_104653231	3300032179	Soil	EVNPKGLELILAFIAKTVPQAATAKSEDFYDPRFTNEMRDSGFLKRLWGES
Ga0364928_0008030_1773_1889	3300033813	Sediment	MSKSMPQAASAKPEDFYDPRFFTDLRDSGFLKKLWSEK
Ga0364927_0092882_711_830	3300034148	Sediment	LISKTVPQAASAKAEDFYDPRFSNELRDSGFLKKLWGEK
Ga0364933_066618_753_896	3300034150	Sediment	KGIELILGLISKTVPQAASAKAEDFYDPRFFNELRDSGFLKKLWGEK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F068552

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences