Metagenome / Metatranscriptome Family F068536

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F068536
Family Type	Metagenome / Metatranscriptome
Number of Sequences	124
Average Sequence Length	87 residues
Representative Sequence	RANRFIDENREETIRIMTKFVPQSNEIAARSYDVELKALARDGQMTDAEIEFQMERLADKKRPLDEVRDFSFARGAFKELEAGK
Number of Associated Samples	109
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	95.97 %
% of genes from short scaffolds (< 2000 bps)	90.32 %
Associated GOLD sequencing projects	107
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.581 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (11.290 % of family members)
Environment Ontology (ENVO)	Unclassified (31.452 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (43.548 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 52.68% β-sheet: 0.00% Coil/Unstructured: 47.32%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF09084	NMT1	48.39
PF03401	TctC	7.26
PF09957	VapB_antitoxin	2.42
PF13594	Obsolete Pfam Family	2.42
PF13379	NMT1_2	0.81
PF05016	ParE_toxin	0.81
PF04828	GFA	0.81
PF00449	Urease_alpha	0.81
PF02384	N6_Mtase	0.81
PF04542	Sigma70_r2	0.81
PF07969	Amidohydro_3	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG0715	ABC-type nitrate/sulfonate/bicarbonate transport system, periplasmic component	Inorganic ion transport and metabolism [P]	48.39
COG4521	ABC-type taurine transport system, periplasmic component	Inorganic ion transport and metabolism [P]	48.39
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	7.26
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.81
COG0804	Urease alpha subunit	Amino acid transport and metabolism [E]	0.81
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.81
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.81
COG3791	Uncharacterized conserved protein	Function unknown [S]	0.81
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.58 %
Unclassified	root	N/A	2.42 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.58 %
Unclassified	root	N/A	2.42 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.58 %
Unclassified	root	N/A	2.42 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	84.68 %
Unclassified	root	N/A	2.42 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	1.61 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.81 %

Name	Rank	Taxonomy	Distribution
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	83.87 %
Unclassified	root	N/A	2.42 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	1.61 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.81 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	83.87 %
Unclassified	root	N/A	2.42 %
candidate division NC10	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10	1.61 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.81 %

Name	Rank	Taxonomy	Distribution
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	83.87 %
Unclassified	root	N/A	2.42 %
Candidatus Methylomirabilis	genus	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → Candidatus Methylomirabilis	1.61 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.81 %

Name	Rank	Taxonomy	Distribution
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	83.87 %
Unclassified	root	N/A	2.42 %
Candidatus Methylomirabilis oxyfera	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → Candidatus Methylomirabilis → Candidatus Methylomirabilis oxyfera	1.61 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2228664021\|ICCgaii200_c0516355	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	804	Open in IMG/M
3300000655\|AF_2010_repII_A100DRAFT_1060854	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	669	Open in IMG/M
3300000881\|JGI10215J12807_1358329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	852	Open in IMG/M
3300000955\|JGI1027J12803_100685271	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	639	Open in IMG/M
3300000955\|JGI1027J12803_102567382	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	741	Open in IMG/M
3300001139\|JGI10220J13317_12983815	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	681	Open in IMG/M
3300003321\|soilH1_10142059	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2387	Open in IMG/M
3300003998\|Ga0055472_10078318	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	891	Open in IMG/M
3300004022\|Ga0055432_10085461	All Organisms → cellular organisms → Bacteria → Proteobacteria	810	Open in IMG/M
3300004024\|Ga0055436_10029615	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1391	Open in IMG/M
3300004463\|Ga0063356_100385001	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1794	Open in IMG/M
3300004463\|Ga0063356_103528045	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	674	Open in IMG/M
3300004479\|Ga0062595_100612690	Not Available	851	Open in IMG/M
3300004778\|Ga0062383_10735486	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	505	Open in IMG/M
3300005288\|Ga0065714_10183870	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	952	Open in IMG/M
3300005331\|Ga0070670_100967880	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	773	Open in IMG/M
3300005332\|Ga0066388_101094434	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1348	Open in IMG/M
3300005336\|Ga0070680_100550592	All Organisms → cellular organisms → Bacteria	989	Open in IMG/M
3300005336\|Ga0070680_101470109	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	590	Open in IMG/M
3300005336\|Ga0070680_101727124	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	542	Open in IMG/M
3300005367\|Ga0070667_102083064	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	534	Open in IMG/M
3300005445\|Ga0070708_100633417	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1008	Open in IMG/M
3300005456\|Ga0070678_100072209	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2586	Open in IMG/M
3300005536\|Ga0070697_100554052	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1008	Open in IMG/M
3300005545\|Ga0070695_100553664	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	897	Open in IMG/M
3300005546\|Ga0070696_100654165	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	852	Open in IMG/M
3300005555\|Ga0066692_10928279	All Organisms → cellular organisms → Bacteria	533	Open in IMG/M
3300005617\|Ga0068859_100450539	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1383	Open in IMG/M
3300005618\|Ga0068864_102318176	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	543	Open in IMG/M
3300005829\|Ga0074479_10690525	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	510	Open in IMG/M
3300005841\|Ga0068863_100294732	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1573	Open in IMG/M
3300005842\|Ga0068858_101187436	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	750	Open in IMG/M
3300006031\|Ga0066651_10022898	All Organisms → cellular organisms → Bacteria	2715	Open in IMG/M
3300006032\|Ga0066696_10914132	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	558	Open in IMG/M
3300006049\|Ga0075417_10470898	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	628	Open in IMG/M
3300006852\|Ga0075433_10362857	All Organisms → cellular organisms → Bacteria	1280	Open in IMG/M
3300006853\|Ga0075420_101573809	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	563	Open in IMG/M
3300006871\|Ga0075434_100591781	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1128	Open in IMG/M
3300006904\|Ga0075424_100388110	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1488	Open in IMG/M
3300006914\|Ga0075436_101139565	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	588	Open in IMG/M
3300006969\|Ga0075419_10840060	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	659	Open in IMG/M
3300009100\|Ga0075418_12893709	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	524	Open in IMG/M
3300009111\|Ga0115026_11734477	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	527	Open in IMG/M
3300009147\|Ga0114129_10206489	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2657	Open in IMG/M
3300009147\|Ga0114129_12330862	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	642	Open in IMG/M
3300009162\|Ga0075423_12343989	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300009176\|Ga0105242_10969598	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	856	Open in IMG/M
3300010040\|Ga0126308_11107656	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	558	Open in IMG/M
3300010047\|Ga0126382_11195228	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	681	Open in IMG/M
3300010336\|Ga0134071_10141036	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1168	Open in IMG/M
3300010373\|Ga0134128_12250548	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	600	Open in IMG/M
3300010396\|Ga0134126_12516632	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	560	Open in IMG/M
3300010401\|Ga0134121_10009831	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	7599	Open in IMG/M
3300011271\|Ga0137393_10477482	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1069	Open in IMG/M
3300011397\|Ga0137444_1023475	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	881	Open in IMG/M
3300011437\|Ga0137429_1003684	All Organisms → cellular organisms → Bacteria	4669	Open in IMG/M
3300011445\|Ga0137427_10056434	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1555	Open in IMG/M
3300012034\|Ga0137453_1046550	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	777	Open in IMG/M
3300012172\|Ga0137320_1100932	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	616	Open in IMG/M
3300012202\|Ga0137363_10610882	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	921	Open in IMG/M
3300012353\|Ga0137367_11072708	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300012359\|Ga0137385_10489231	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1042	Open in IMG/M
3300012362\|Ga0137361_10194978	All Organisms → cellular organisms → Bacteria	1830	Open in IMG/M
3300012930\|Ga0137407_11855295	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	575	Open in IMG/M
3300012951\|Ga0164300_10093988	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1301	Open in IMG/M
3300012957\|Ga0164303_11490776	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	510	Open in IMG/M
3300013308\|Ga0157375_10628644	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1231	Open in IMG/M
3300013308\|Ga0157375_12559676	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	609	Open in IMG/M
3300014150\|Ga0134081_10047166	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1280	Open in IMG/M
3300014968\|Ga0157379_11077939	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	769	Open in IMG/M
3300014969\|Ga0157376_11460355	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	716	Open in IMG/M
3300015077\|Ga0173483_10255969	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	836	Open in IMG/M
3300015257\|Ga0180067_1035459	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1015	Open in IMG/M
3300015371\|Ga0132258_11170844	All Organisms → cellular organisms → Bacteria	1943	Open in IMG/M
3300015372\|Ga0132256_101090309	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → Candidatus Methylomirabilis → Candidatus Methylomirabilis oxyfera	913	Open in IMG/M
3300015372\|Ga0132256_101657622	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	749	Open in IMG/M
3300015372\|Ga0132256_103334904	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	540	Open in IMG/M
3300015373\|Ga0132257_100798969	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division NC10 → Candidatus Methylomirabilis → Candidatus Methylomirabilis oxyfera	1178	Open in IMG/M
3300015373\|Ga0132257_104514216	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	506	Open in IMG/M
3300015374\|Ga0132255_100301468	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2307	Open in IMG/M
3300015374\|Ga0132255_103790720	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	642	Open in IMG/M
3300015374\|Ga0132255_103794223	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	642	Open in IMG/M
3300016294\|Ga0182041_11143994	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	708	Open in IMG/M
3300016319\|Ga0182033_10506876	All Organisms → cellular organisms → Bacteria	1037	Open in IMG/M
3300016422\|Ga0182039_11410698	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	633	Open in IMG/M
3300018063\|Ga0184637_10521124	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	687	Open in IMG/M
3300018073\|Ga0184624_10063992	All Organisms → cellular organisms → Bacteria	1519	Open in IMG/M
3300018079\|Ga0184627_10400354	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	715	Open in IMG/M
3300018081\|Ga0184625_10019953	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3193	Open in IMG/M
3300018422\|Ga0190265_13772707	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	505	Open in IMG/M
3300018466\|Ga0190268_10695031	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	745	Open in IMG/M
3300018482\|Ga0066669_10157603	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1680	Open in IMG/M
3300018482\|Ga0066669_10711663	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	885	Open in IMG/M
3300019886\|Ga0193727_1177552	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	550	Open in IMG/M
3300021344\|Ga0193719_10383442	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	581	Open in IMG/M
3300021344\|Ga0193719_10400244	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	565	Open in IMG/M
3300022694\|Ga0222623_10102770	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1112	Open in IMG/M
3300025893\|Ga0207682_10080728	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1393	Open in IMG/M
3300025920\|Ga0207649_10479699	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	943	Open in IMG/M
3300026306\|Ga0209468_1017564	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2583	Open in IMG/M
3300026320\|Ga0209131_1293906	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	609	Open in IMG/M
3300026464\|Ga0256814_1015746	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	791	Open in IMG/M
3300027815\|Ga0209726_10328544	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	736	Open in IMG/M
3300027831\|Ga0209797_10122604	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1127	Open in IMG/M
3300027843\|Ga0209798_10158627	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1131	Open in IMG/M
3300027907\|Ga0207428_10168246	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1661	Open in IMG/M
3300027907\|Ga0207428_10459796	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300031091\|Ga0308201_10114211	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	799	Open in IMG/M
3300031562\|Ga0310886_10164868	All Organisms → cellular organisms → Bacteria	1180	Open in IMG/M
3300031820\|Ga0307473_10354013	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	945	Open in IMG/M
3300031903\|Ga0307407_10081758	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1956	Open in IMG/M
3300031910\|Ga0306923_12325273	Not Available	534	Open in IMG/M
3300032013\|Ga0310906_11082268	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	579	Open in IMG/M
3300032157\|Ga0315912_11610604	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	511	Open in IMG/M
3300032180\|Ga0307471_101575793	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	813	Open in IMG/M
3300032205\|Ga0307472_100596125	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	974	Open in IMG/M
3300032421\|Ga0310812_10472511	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	565	Open in IMG/M
3300033004\|Ga0335084_10203781	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2053	Open in IMG/M
3300033412\|Ga0310810_10091500	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	3643	Open in IMG/M
3300033475\|Ga0310811_10870981	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	821	Open in IMG/M
3300034149\|Ga0364929_0068729	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1091	Open in IMG/M
3300034151\|Ga0364935_0130616	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	786	Open in IMG/M
3300034151\|Ga0364935_0183964	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	669	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	67.74%
Host-Associated	Host-Associated	32.26%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.81%
Plants	Host-Associated → Plants	32.26%
Aquatic	Environmental → Aquatic	16.94%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	48.39%
Rhizosphere	Host-Associated → Plants → Rhizosphere	20.97%
Rhizoplane	Host-Associated → Plants → Rhizoplane	11.29%
Sediment	Environmental → Aquatic → Sediment	9.68%
Freshwater	Environmental → Aquatic → Freshwater	4.84%
Marine	Environmental → Aquatic → Marine	2.42%
Floodplain	Environmental → Terrestrial → Floodplain	2.42%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	41.13%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.32%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.68%
Loam	Environmental → Terrestrial → Soil → Loam	6.45%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.65%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.65%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.84%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.23%
Wetlands	Environmental → Aquatic → Marine → Wetlands	2.42%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	2.42%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.81%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.81%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.81%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.81%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.77%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.32%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.68%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.68%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	6.45%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.65%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.84%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.42%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	2.42%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	2.42%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.61%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.61%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.81%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.81%
Contaminated	Environmental → Aquatic → Freshwater → Groundwater → Contaminated	0.81%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.81%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	11.29%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.48%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.26%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	4.84%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.84%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	4.84%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.23%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.23%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.23%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.23%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	2.42%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	2.42%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.42%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.42%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.42%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.42%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	2.42%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.42%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	2.42%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.61%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.61%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.61%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.81%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	0.81%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Contaminated → Groundwater	0.81%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.81%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.81%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.81%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	0.81%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.81%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.81%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.81%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.81%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.81%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2228664021	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000655	Forest soil microbial communities from Amazon forest - 2010 replicate II A100	Environmental	Open in IMG/M
3300000881	Soil microbial communities from Great Prairies - Wisconsin Restored Prairie soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001139	Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soil	Environmental	Open in IMG/M
3300003321	Sugarcane bulk soil Sample H1	Environmental	Open in IMG/M
3300003998	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2	Environmental	Open in IMG/M
3300004022	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqA_D1	Environmental	Open in IMG/M
3300004024	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh	Environmental	Open in IMG/M
3300005288	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1	Host-Associated	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005829	Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.190_CBC	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300011397	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT319_2	Environmental	Open in IMG/M
3300011437	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT736_2	Environmental	Open in IMG/M
3300011445	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT700_2	Environmental	Open in IMG/M
3300012034	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT526_2	Environmental	Open in IMG/M
3300012172	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT366_2	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015257	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT231_16_10D	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300018063	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018422	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 T	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019886	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026306	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)	Environmental	Open in IMG/M
3300026320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)	Environmental	Open in IMG/M
3300026464	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 CS5	Environmental	Open in IMG/M
3300027815	Subsurface groundwater microbial communities from S. Glens Falls, New York, USA - GMW46 contaminated, 5.4 m (SPAdes)	Environmental	Open in IMG/M
3300027831	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027843	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare3Fresh (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300031091	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_355 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031903	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1	Host-Associated	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031965	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT100D185	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032421	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NN3	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M
3300034151	Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICCgaii200_05163553	2228664021	Soil	KANRYIEGNREETIRIMTKYVPQPVETAARSYDVEFKALAKDGQMTDAEIEFQMERLADKKRPLDEIRDFSFARQALKELDAGR
AF_2010_repII_A100DRAFT_10608542	3300000655	Forest Soil	ANRFLEANREETIRIMAHYVPQTLELAARSYDVELKALAKDGTMTDAEIEGQLERLADKKRPLDEIRDFSFARQSLKEIESGK*
JGI10215J12807_13583292	3300000881	Soil	RLIKENPLVLRKTIRAALRANRFIEANREETIRIMAQYVPQKLDPAARSYDVELKALAKDGTMTDAEIDFQMDRLAEKRRPLDEVRDFSFARQALKELESAR*
JGI1027J12803_1006852712	3300000955	Soil	IRIMAQAVPQSPEAAARSYEVELKALAKDGQMTDAEMESLMERLSDKKKPLDEVRDFSYARLALKELEAGK*
JGI1027J12803_1025673821	3300000955	Soil	FIEENRQETIRIMAQAVPQSPEAAARSYDVELKALAKDGQMTDAEIESLMERLSDKKRPLDEVRDFSYARLALKELEAGK*
JGI10220J13317_129838151	3300001139	Soil	LRRTIRAALRANRFIDENREETIRIMTKFVPQSNEIAARSYDVELKALARDGQMTDAEIEFQMERLADKKRPLDEVRDFSFARGAFKELEAGK*
soilH1_101420593	3300003321	Sugarcane Root And Bulk Soil	LIKENPQILRRTIRAALRANKFIDENREETIRIMTKFVPQSNEIAARSYDVELKALARDGQMTDAEIEFQMERLAEKKRPLDEVRDFSIARQVVKELESGK*
Ga0055472_100783183	3300003998	Natural And Restored Wetlands	TLKANRFLEGNREETIRIMTKFVPQAPEVAARSYDVELKALAKDGTMTDAEIEFQMDRLADKKRRLDEIRDFSFARQALKELDSGK*
Ga0055432_100854611	3300004022	Natural And Restored Wetlands	LVLRKTIRAALRANRFIEANREETIRIMAQYVPQKLDLAARSYDVELKALAKDGTMTDAEIEFQMDRLAEKRRPLDEVRDFSFARQALKELESGR*
Ga0055436_100296152	3300004024	Natural And Restored Wetlands	RIMAQFVPQKLELAARSYDTELKALAKDGTMTDAEIEFQMDRLAEKRRPLDEVRDFSFARQALKELESGAR*
Ga0063356_1003850011	3300004463	Arabidopsis Thaliana Rhizosphere	RAALRANRFIDENREETIRIMTKFVPQSNEIAARSYDVELKALARDGQMTDAEIEFQMERLADKKRPLDEVRDFSIARQVVKELESGK*
Ga0063356_1035280451	3300004463	Arabidopsis Thaliana Rhizosphere	NRFIEANREETIRIMAQYVPQKLDLAARSYDVELKALAKDGTMTDAEIEFQMDRLAEKRRPLDEVRDFSFARQAMKELESGK*
Ga0062595_1006126903	3300004479	Soil	RIMTGAVAQTPEAAARSYDIELKALARDGQMTDAEIEFQMERLSDKKRPLDEVRDFSHVRQALKELGL*
Ga0062383_107354861	3300004778	Wetland Sediment	ENPQVLRKTIRALLRANKFLEANREETIRIMSHYVPQKFDLAARSYDVELKTLAKDGTMTDAEIEGQMERLADKKRPLDEVRDFSFARAAWKELEAGK*
Ga0065714_101838703	3300005288	Miscanthus Rhizosphere	RANRFIDENREETIRIMTKFVPQTAEIAARSYDVELKALARDGQMTDSEIEFQMERLADKKRPLDEVRDFSFARAVFKELEAGK*
Ga0070670_1009678803	3300005331	Switchgrass Rhizosphere	LLVLRKTIRAVLRANRFIEANREETIRIMAQYVPQKLDLAGRSYDVELKALAKDGTMTDAEIEFQMDRLAEKRRPLDEVRDFSFAHQAMKELDSGR*
Ga0066388_1010944341	3300005332	Tropical Forest Soil	RRTIRAALRANRFIDENREETIRIMTKFVPQTTEIAARSYDVELKALARDGQMTDSEIEFQMERLTDKKRPLDEVRDFSIARAVFKELEAGK*
Ga0070680_1005505923	3300005336	Corn Rhizosphere	NPQILRRTIRAALRANKFIDENREETIRIMTKFVPQSNEIAARSYDVELKALARDGQMTDAEIEFQMERLAEKKRPLDEVRDFSIARQAVKELESGK*
Ga0070680_1014701092	3300005336	Corn Rhizosphere	TVKANRYIEGNREETIRIMTKYVPQPVETAARSYDVEFKALAKDGQMTDAEIEFQMERLADKKRPLDEIRDFSFARQALKELDAGR*
Ga0070680_1017271242	3300005336	Corn Rhizosphere	IGDHRDETIRIMTNFVPQSVETAARSYDIELKTLAKDGQMTDAEIEFQMDRLAEKRRPLDEVRDFSFARQALKELESGK*
Ga0070667_1020830642	3300005367	Switchgrass Rhizosphere	RIMAKAVPQSLEAAARSYDIELKQLARNGLMTDSEIEFQMDRLAEKRRPLDEVRDFSFARQALKELESGK*
Ga0070708_1006334171	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	TIRIMAHYVPQTLELAARSYDVELKALAKDGTMTDAEIEGQLERLADKKRPLDEIRDFSFARQALKEIESNK*
Ga0070678_1000722094	3300005456	Miscanthus Rhizosphere	IKENPQILRRTIRAALRANRFIDENREETIRIMTKFVPQSNEIAARSYDVELKALARDGQMTDAEIEFQMERLADKKRPLDEVRDFSFARGAFKELEAGK*
Ga0070697_1005540522	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	TIRAALKANHFIESNREETIRIMAQYVPQKLELAGRSYDTELKALSKDGTMTDAEIEFQMDRLAEKRRPLDEVRDFSFARQALKELER*
Ga0070695_1005536641	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	ETLRIMAKAVPQSLEAAARSYDIELKQLARDGLMTDAEIEFQMDRLAEKRRPLDEVRDFSFARQALKELESGK*
Ga0070696_1006541651	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	ENREETIRIMTKFVPQSNEIAARSYDVELKALARDGQMTDAEIEFQMERLAEKKRPLDEVRDFSIARQVVKELESGK*
Ga0066692_109282792	3300005555	Soil	AALKANRFIEENREETIRIMTRFVPQALETAARSYDVELKALAKDGQMTDAEIEFQMERLAEKRRPLDEIRDFSFARQAFKEIELNR*
Ga0068859_1004505391	3300005617	Switchgrass Rhizosphere	NRFIDENREETIRIMTKFVPQTAEIAARSYDVELKALARDGQMTDSEIEFQMERLADKKRPLDEIRDFSFARAVFKELEAGK*
Ga0068864_1023181761	3300005618	Switchgrass Rhizosphere	IDENREETIRIMTKFVPQTAEIAARSYDVELKALARDGQMTDSEIEFQMERLADKKRPLDEIRDFSFARAVFKELEAGK*
Ga0074479_106905252	3300005829	Sediment (Intertidal)	SPLSTIRALLKANRFLEANREETIRIMSHYVPQKLDLAARSYDVELKTLAKDGTMTDAEIEGQMERLADKKRPLDEVRDFSFARAAWKELEAGK*
Ga0068863_1002947321	3300005841	Switchgrass Rhizosphere	ALRANRFIDENREETIRIMTKFVPQSNEIAARSYDVELKALARDGQMTDAEIEFQMERLADKKRPLAEVRDFSFARGAFKELEAGK*
Ga0068858_1011874363	3300005842	Switchgrass Rhizosphere	ENREETIRIMTKFVPQSNEIAARSYDVELKALARDGQMTDAEIEFQMERLADKKRPLDEVRDFSFARGAFKELEAGK*
Ga0066651_100228984	3300006031	Soil	AALRANRFIEENREETIRIMTRFVPQSLETAARSYDVEFKALAKDGQMTDAEIEFQMERLAEKRRPLDEIRDFSFARQALKEIESNK*
Ga0066696_109141322	3300006032	Soil	ANRFIEENREETIRIMTRFVPQSLETATRSYDVEFKALAKDGQMTDAEIEFQMERLAEKRRPLDEIRDFSFARQALKEIESNK*
Ga0075417_104708981	3300006049	Populus Rhizosphere	ETIRIMAQAVPQSPEAAARSYDVELKALAKDGQMTDAEMENLMERLSDKKRPLDEVRDFSYARLALKELEAGK*
Ga0075433_103628572	3300006852	Populus Rhizosphere	NRFIEENRQETIRIMAQAVPQSPEAAARSYDVELKALAKDGQMTDAEIESLMERLSDKKRPLDEVRDFSYARLALKELEAGK*
Ga0075420_1015738091	3300006853	Populus Rhizosphere	NRYIEGNREETIRIMTKYVPQPVETAARSYDVEFKALAKDGQMTDAEIEFQMERLADKKRPLDEIRDFSFARQALKELDAGR*
Ga0075434_1005917813	3300006871	Populus Rhizosphere	TIRIMTKFVPQTTEIAARSYDVELKALARDGQMTDSEIEFQMERLADKKRPLDEIRDFSFARAVVKELESGK*
Ga0075424_1003881103	3300006904	Populus Rhizosphere	REETIRIMTKFVPQTTEIAARSYDVELKALARDGQMTDSEIEFQMERLADKKRPLDEIRDFSFARAVVKELESGK*
Ga0075436_1011395651	3300006914	Populus Rhizosphere	IKENPQILRRTIRAALRANRFIDENREETIRIMTKFVPQTAEIAARSYDVELKALARDGQMTDSEIEFQMERLADKKRPLDEVRDFSFARAVFKELEAGK*
Ga0075419_108400601	3300006969	Populus Rhizosphere	IRIMTKFVPQSAEIAARSYDIELKTLSKDGQMTDAEIEFQMDRLADKKRPLDEVRDFSFARQALKELAAGK*
Ga0075418_128937091	3300009100	Populus Rhizosphere	LRRTLRALLKANRFMEENRRETIRIMAQAVPQSPEAAARSYDVELKALAKDGQMTDAEMESLMERLSDKKRPLDEVRDFSYARLALKELEAGK*
Ga0115026_117344772	3300009111	Wetland	LIKENPLVLRKTIRAALRANRFIEGNREETIRIMAQYVPQKLDLAARSYDVELKALAKDGTMTDAEIEFQMDRLAEKRRPLDEVRDFSFARQALKELEGAR*
Ga0114129_102064893	3300009147	Populus Rhizosphere	LRRTIRASLRANRFIDENKEETIRIMTKFVPQPSEIAARSYDVELKALARDGQMTDAEIEFQMDRLAEKKRPLDEVRDFSFARAAFKELEAGK*
Ga0114129_123308621	3300009147	Populus Rhizosphere	NRHETIRIMAQAVPQSPEAAARSYDVELKALAKDGQMTDAEMENLMERLSDKKRPLDEVRDFSYARLALKELEAGK*
Ga0075423_123439891	3300009162	Populus Rhizosphere	NRFIEENRQETIRIMAQAVPQSPEAAARSYDVELKALAKDGQMTDAEMENLMERLSDKKRPLDEVRDFSYARLALKELEAGK*
Ga0105242_109695981	3300009176	Miscanthus Rhizosphere	EETIRIMTKFVPQSNEIAARSYDVELKALARDGQMTDAEIEFQMERLADKKRPLDEVRDFSFARGAFKELEAGK*
Ga0126308_111076561	3300010040	Serpentine Soil	ALRANRFIEANREETIRIMAQYVPQKLDLAGRSYDVELKALAKDGTMTDAEIEFQMDRLAEKRRPLDEVRDFSFARQALKELESAR*
Ga0126382_111952282	3300010047	Tropical Forest Soil	LKANRFIETNREETIRIMTKFVPQSLDVAARSYDVELKALARDGQMTDAEIEFQMERLADKERPLDEIRDFSFARQALRELEAGK*
Ga0134071_101410361	3300010336	Grasslands Soil	IRIMTRFVPQSLETATRSYDVEFKALAKDGQMTDAEIEFQMERLAEKRRPLDEIRDFSFARQALKEIESNK*
Ga0134128_122505481	3300010373	Terrestrial Soil	PQILRRTIRAALRANRFIDENREETIRIMTKFVAQSNEIAARSYDVELKALARDGQMTDAEIEFQMERLADKKRPLDEVRDFSFARGAFKELEAGK*
Ga0134126_125166322	3300010396	Terrestrial Soil	PQILRRTIRAALRANRFIDENREETIRIMTKFVPQTAEIAARSYDVELKALARDGQMTDSEIEFQMERLADKKRPLDEVRDFSFARQAVKELEGGK*
Ga0134121_100098318	3300010401	Terrestrial Soil	RANRFIDENREETIRIMTKFVPQSNEIAARSYDVELKALARDGQMTDAEIEFQMERLADKKRPLDEVRDFSFARGAFKELEAGK*
Ga0137393_104774821	3300011271	Vadose Zone Soil	EETIRIMTRFVPQPLETAARSYDVELKALAKDGQMTDAEIEFQMERLADKKRPLDEIRDFSFARQALKEIESGK*
Ga0137444_10234751	3300011397	Soil	ILRRTIRAALKANKFIDANREETIRIMTQRVPQTAESAARSYDVELKQLARDGQMTDAEIEFQMDRLAEKRRPLDEVRDFSFARQAMKEFEAGK*
Ga0137429_10036845	3300011437	Soil	TIRIMAKLVPQSLETAARSYDVELKQLARDGQMTDAEIEFQMDRLAEKRRPLDEVRDFSFARTALKELESTR*
Ga0137427_100564341	3300011445	Soil	ENPQILRRTIRAALKANKFIDANREETIRIMAKMVPQSLETAARSYDVELKQLARDGQMTDAEIEFQMDRLAEKRRPLDEVRDFSFARTALKELESTR*
Ga0137453_10465501	3300012034	Soil	RALLKANRFLEANREETIRIMSQYVPQKLDLAARSYDVELKTLAKDGTMTDAEIEGQMERLADKKRPLDEVRDFSFARAAWKELEAGK*
Ga0137320_11009322	3300012172	Soil	ILRRTIRAALKANKFIDANREETIRIMAKMVPQSLETAARSYDVELKQLARDGQMTDAEIEFQMDRLAEKRRPLDEVRDFSFARTALKELESTR*
Ga0137363_106108822	3300012202	Vadose Zone Soil	FASDRLLKENPETLRRTLRALLRANRFIEENRQETIRIMAQAVPQSPEAAARSYEVELKALAKDGQMTDAEMESLMERLSDKKRPLDEVRDFSYARLALKELEAGK*
Ga0137367_110727082	3300012353	Vadose Zone Soil	ETIRIMAQAVPQSPEAAARSYDVELKALAKDGQMTDAEMESLMERLSDKKRPLDEVRDFSYARLALKELEAGK*
Ga0137385_104892311	3300012359	Vadose Zone Soil	TIRAALRANRFIEENREETIRIMTRFVPQSLETATRSYDVEFKALAKDGQMTDAEIEFQMERLAEKRRPLDEIRDFSFARQALKELESNK*
Ga0137361_101949783	3300012362	Vadose Zone Soil	EENRQETIRIMAQAVPQSPEAAARSYEVELKALAKDGQMTDAEMESLMERLSDKKRPLDEVRDFSYARLALKELEAGK*
Ga0137407_118552952	3300012930	Vadose Zone Soil	RANRFIEENREETIRIMTRFVPQSLETATRSYDVEFKALAKDGQMTDAEIEFQMERLAEKRRPLDEIRDFSFARQALKEIESNK*
Ga0164300_100939881	3300012951	Soil	RFIDENREETIRIMTKFVPQTAEIAARSYDVELKALARDGQMTDSEIEFQVERLADKKRPLDEIRDFSFARAVFKELEAGK*
Ga0164303_114907761	3300012957	Soil	ETIRIMIRFVPQSAEIAARSYDIELKTLSKDGQMTDAEIEFQMDRLADKKRPLDEVRDFSFARQALKELAVGK*
Ga0157375_106286443	3300013308	Miscanthus Rhizosphere	RRTIRAALRANRFIDENREETIRIMTKFVPQSNEIAARSYDVELKALARDGQMTDAEIEFQMERLADKKRPLDEVRDFSFARGHSKSWKPGNNFVTGE*
Ga0157375_125596762	3300013308	Miscanthus Rhizosphere	NRFIGENRDETIRILARYVPQSVETAARSYDVELKALAKDGQMTDTEIEFQMDRLAEKRRPLDEVRDFSFARQALKELESGK*
Ga0134081_100471662	3300014150	Grasslands Soil	REETVRIMTRFVPQSPETAARSYDVEFKALAKDGQMTDAEIEFQMERLAEKRRPLDEIRDFSFARQALKEIESNK*
Ga0157379_110779391	3300014968	Switchgrass Rhizosphere	IRAALRANRFIDENREGIICIMTKFVPQLNEIVVRLYDVELKALARDGQMTDAEIEFQMERLADKKRPLDEVRDFSFARGAFKELEAGK*
Ga0157376_114603552	3300014969	Miscanthus Rhizosphere	NRDETIRILTQFVLQTLDLAARTYDVELKALAKDGTMTDAEIEGQLERLAPKKRPLDEIRDFSFARAALKELESAR*
Ga0173483_102559691	3300015077	Soil	NREETIRIMTKFVPQSNEIAARSYDVELKALARDGQMTDAEIEFQLERLADKKRPLDEVRDFSFARAVFKELEAGK*
Ga0180067_10354592	3300015257	Soil	KANRFLEANREETIRIMSQYVPQKLDLAARSYDVELKTLAKDGTMTDGEIEGQMERLADKKRPLDEVRDFSFARAAWKELEAGK*
Ga0132258_111708444	3300015371	Arabidopsis Rhizosphere	DRFIKESPQVLRRTIRAMLRANRFIEEHRDETIRIMMGAVQQTPEAAARSYDVELKTLARDGQMTDAELEAQMERLGDKKRPLDEIRDFSHVRQALKELGGR*
Ga0132256_1010903091	3300015372	Arabidopsis Rhizosphere	ADRFIKESPQVLRRTIRAMLRANRFIEEHRDETIRIMMGAVQQTPEAAARSYDVELKTLARDGQMTDAELEAQMERLGDKKRPLDEIRDFSHVRQALKELGGR*
Ga0132256_1016576222	3300015372	Arabidopsis Rhizosphere	ETIRILTQFVPQTLDLAARTYDVELKALAKDGTMTDAEIEGQLERLAPKKRPLDEIRDFSFARAALKELESAR*
Ga0132256_1033349041	3300015372	Arabidopsis Rhizosphere	NPQILRRTIRAALRANRFIDENREETIRIMTKFVPQTAEIAARSYDVELKALARDGQMTDSEIEFQMERLADKKRPLDEVRDFSFARAVFKELEAGK*
Ga0132257_1007989693	3300015373	Arabidopsis Rhizosphere	ESPQVLRRTIRAMLRANRFIEEHRDETIRIMMGAVQQTPEAAARSYDVELKTLARDGQMTDAELEAQMERLGDKKRPLDEIRDFSHVRQALKELGGR*
Ga0132257_1045142161	3300015373	Arabidopsis Rhizosphere	IRILTQFVPQTLDLAARTYDVELKALAKDGTMTDAEIEGQLERLAPKKRPLDEIRDFSFARAALKELESAR*
Ga0132255_1003014681	3300015374	Arabidopsis Rhizosphere	RTIRAALRANRFIDENREETIRIMTKFVPQTAEIAARSYDVELKALARDGQMTDSEIEFQMERLADKKRPLDEVRDFSFARQAVKELESGK*
Ga0132255_1037907202	3300015374	Arabidopsis Rhizosphere	IRAALRANRFIDENREETIRIMTKFVPQTAEIAARSYDVELKALARDGQMTDSEIEFQMERLADKKRPLDEVRDFSFARAVFKELEAGK*
Ga0132255_1037942231	3300015374	Arabidopsis Rhizosphere	LFASDKLIKENPQILRRTIRAALRANRFIDENREDTIRIMTEFVPQTAEIAARSYDVELKALARDGQMTDSEIEFQMERLADKKRPLDEIRDFSFARAVVKELEAGK*
Ga0182041_111439941	3300016294	Soil	RANRFIEENRQEIIRIMAQAVPQSPEAAARSYDVELKALAKDGQMTDAEMESLMERLSDKKRPLDEVRDFSYARLALKELEAGK
Ga0182033_105068761	3300016319	Soil	ILGRTLRALLRANRFIEENRQEIIRIMAQAVPQSPEVAARSYDVELKALAKDGQMTDAEMESLMKRLSDKKRPLGEVRDFSYARLALKELEAGK
Ga0182039_114106981	3300016422	Soil	ENRQETIRIMAQAVPQSPEAAARSYDVELKALAKDGQMTDAEMESLMKRLSDKKRPLGEVRDFSYARLALKELEAGK
Ga0184637_105211242	3300018063	Groundwater Sediment	RSIEEHRDETIRIMTRLVPQSAEAAARSYDIELKQLSRDGQMTDAAIEFQMDRLAEKKRPLDEIRDFSFARQALKELEANR
Ga0184624_100639923	3300018073	Groundwater Sediment	FIEENRQETIRIMAQAVPQSPEAAARSYDVELKALAKDGQMTDAEMESLMERLSDKKRPWDEVRYFSYARLALKELEAGK
Ga0184627_104003541	3300018079	Groundwater Sediment	REETIRIMAKSVPQSLEAAARSYDIELKQLARDGQMTDAEIEFQMDRLAEKRRPLDEVRDFSFARQALKELEAGK
Ga0184625_100199534	3300018081	Groundwater Sediment	ANRFIGENREETIRIMTKFVPQSAEIAARSYDIELKTLSKDGQMTDAEIEVQMDRLADKRRPLDEVRDFSFARQALKELAVGK
Ga0190265_137727071	3300018422	Soil	RTIRATLKANGYIEGNREETLRIMTKYVPQSVEAAARSYDVEFKALAKDGQMTDAEIEFQMERLADKKRPLDEIRDFSFARQALKELDSGK
Ga0190268_106950312	3300018466	Soil	VIKENPQVLRRTIRALLKANRFLETNREETIRIMSQYVPQKLDLAARSYDVELKTLAKDGTMTDAEIEGQMERLADKKRPLDEVRDFSFARAAWKELEAGK
Ga0066669_101576034	3300018482	Grasslands Soil	SDRSIKETPEGLRSTILATLIANRFIGENREETIRIMIRFVPQSAEIAARSYDIELKTLSKDGQMTDAEIEFQMDRLADKKRPLDEVRDFSFARQALKELAVGK
Ga0066669_107116632	3300018482	Grasslands Soil	LRRTIRAALHANRVIGENREETIRIMTKYVPQSAEIAARSYDVELKALAKDGQMTDAEIEFQMDRLADKKRPLDEIRDFSFARQALKELAAGK
Ga0193727_11775522	3300019886	Soil	IEENRPETIRIMAQAVPQSPEAAVRSYDVELKALAKDGQMTDAEMESLMERLSDKKRPLDEVRDFSYARLALKELEAGK
Ga0193719_103834421	3300021344	Soil	IRATLKANRYIGEHRDETIRIMTNFVPQSVETAARSYDVELKTLAKDGQMTDAEIEFQMDRLAEKRRPLDEVRDFSFARQALKELESGK
Ga0193719_104002441	3300021344	Soil	RFIEENRQETIRIMAHAVPQSPEAAARSYDVELRALAKDGQMTDSEMESLMERLSDKKRPLDEVRDFSYARLALKELEAGK
Ga0222623_101027701	3300022694	Groundwater Sediment	NRFIEENREETIRIMTRAVPQTPEGAARSYDVELKALAKDGQMTDAEIEFQIDRLADKKRPLDEIRDFSFARQALKELEAGK
Ga0207682_100807283	3300025893	Miscanthus Rhizosphere	IRIMTKFVPQSNEIAARSYDVELKALARDGQMTDAEIEFQMERLADKKRPLDEVRDFSFARGAFKELEAGK
Ga0207649_104796992	3300025920	Corn Rhizosphere	MDGSRRAPQRFKGVKENPQILRRTIRAALRANRFIDENREETIRIMTKFVPQTAEIAARSYDVELKALARDGQMTDSEIEFQMERLADKKRPLDEVRDFSFARAVFKELEAGK
Ga0209468_10175641	3300026306	Soil	TIQAALRANRFIEENREETIRIMTRFVPQSLETATRSYDVEFKALAKDGQMTDAEIEFQMERLAEKRRPLDEIRDFSFARQALKEIESNK
Ga0209131_12939061	3300026320	Grasslands Soil	ILRRTIRAALKANHFIESNREETIRIMAQHVPQKLELAGRSYDTELKALSKDGTMTDAEIEFQMDRLAEKRRPLDEVRDFSFARQALKELEGAR
Ga0256814_10157461	3300026464	Sediment	NREETIRILAQYVPQKLELAARSYDTEFKALSKDGTMTDAEIEAQMERLANKKRPLDEVRDFSFARQALKELESAR
Ga0209726_103285441	3300027815	Groundwater	VLRKTIRALLKANRFLEANREETIRILAHYVPQKLELAARSYDTEFKALSKDGTMTDAEIEAQMERLADKKRPLDEIRDFSFARSALKELEAGK
Ga0209797_101226041	3300027831	Wetland Sediment	KLIKESPQILRRTIRALHRANRFIEANRDETIRIMTQYVQQKPELAARSYDIEFKALSKDGTMTDAEIEFQMERLADKKRPLDEVRDFSFARAAWKELETAR
Ga0209798_101586272	3300027843	Wetland Sediment	ENPQVLRKTIRALLRANKFLEANREETIRIMSHYVPQKFDLAARSYDVELKTLAKDGTMTDAEIEGQMERLADKKRPLDEVRDFSFARAAWKELEAGK
Ga0207428_101682461	3300027907	Populus Rhizosphere	IGENREETIRIMTKFVPQSAEIAARSYDIELKTLSKDGQMTDAEIEFQMDRLADKKRPLDEVRDFSFARQALKELAAGK
Ga0207428_104597962	3300027907	Populus Rhizosphere	LKANRFIEENRHETIRIMAQAVPQSPEAAARSYDVELKALAKDGQMTDAEMENLMERLSDKKRPLDEVRDFSYARLALKELEAGK
Ga0308201_101142113	3300031091	Soil	NKFIEDNRQETIRIMAQYVAQPFDVAARSYDVELKALAKDGMMSDSEIEAQMERLADRKRPLDEIRDFSLARQAVRELEAAK
Ga0310886_101648683	3300031562	Soil	FIEENRQETIRIMAQAVPQSPEAAARSYDVELKALAKDGQMTDAEMESLMERLSDKKRPLDEVRDFSYARLALRELEAGK
Ga0307473_103540131	3300031820	Hardwood Forest Soil	RRTIRALLKANRFLEANREETIRIMAHYVPQTLELAARSYDVELKALAKDGTMTDAEIEGQLERLADKKRPLDEIRDFSFARQALKEIEPNK
Ga0307407_100817581	3300031903	Rhizosphere	NPLVLRKTIRAALRANRFIEGNREETIRIMAQYVPQKLDLAGRSYDVELKALAKDGTMTDAEIEFQMDRLAEKRRPLDEVRDFSFARQALKELEIAR
Ga0306923_123252732	3300031910	Soil	RTLRALLRANRFIEENRQETIRIMAQAVPQSPEAAARSYDVELKALAKDGQMTDAEMESLMKRLSDKKRPLDEVRDFSYARLALKELEAGK
Ga0326597_104038482	3300031965	Soil	ENPQTVKSALRALLRANRFIEVNRQETIPVMMKWVKQPQEIAARSYDLELRTLAKDGQMSDADLESFIERLGEKKRPLDEVRDFSFARQALKELDAGR
Ga0310906_110822681	3300032013	Soil	LRRTIRAALRANRFIDENREETIRIMTKFVPQTAEIAARSYDVELKALARDGQMTDSEIEFQMERLADKKRPLDEVRDFSFARAVFKELEAGK
Ga0315912_116106042	3300032157	Soil	RIMTKYVPQSIETAARSYDVEFKALAKDGQMTDAEIEFQMERLADKKRPLDDIRDFSFARQALKELESGR
Ga0307471_1015757931	3300032180	Hardwood Forest Soil	LLRANRFIGENRQETIRIMAQAVPQSPAAAARSYEVELKALAKDGQMTDAEMESLMERLSDKKRPLDEVRDFSYARLALKELEAGK
Ga0307472_1005961251	3300032205	Hardwood Forest Soil	ALRRTIRALLKANRFLEANREETIRIMAHYVPQTLELAARSYDVELKALAKDGTMTDAEIEGQLERLADKKRPLDEIRDFSFARQALKEIEPNK
Ga0310812_104725112	3300032421	Soil	RRTIRAALRANRFIDENREEAIRIMTKFVPQTAEIAARSYDVELKALARDGQMTDSEIEFQMERLADKKRPLDEVRDFSFARAVFKELEAGK
Ga0335084_102037814	3300033004	Soil	FLEANREETIRIMAHYVPQTLELAARSYDVELKALAKDGTMSDAEIEGQLERLADKKRPLDEIRDFSFARQAMKELESSK
Ga0310810_100915005	3300033412	Soil	IRAALRANRFIDENREEAIRIMTKFVPQTAEIAARSYDVELKALARDGQMTDSEIEFQVERLADKKRPLDEIRDFSFARAVFKELEAGK
Ga0310811_108709811	3300033475	Soil	QILRRTIRAALRANRFIDENREETIRIMTKFVPQSNEIAARSYDVELKALARDGQMTDAEIEFQMERLADKKRPLDEVRDFSFARGAFKELEAGK
Ga0364929_0068729_2_304	3300034149	Sediment	IKENPQVLRRTIRALLKANRFLEANREETIRIMSQYVPQKLDLAARSYDVELKTLAKDGTMTDGEIEGQMERLADKKRPLDEVRDFSFARAAWKELEAGK
Ga0364935_0130616_499_780	3300034151	Sediment	VKSALRALLRANRFIEVNRQETIPIMMKWVKQPQEIAARSYDLELRTLAKDGQMSDADLESFIERLGEKKRPLDEVRDFSFARQALKELDAGR
Ga0364935_0183964_2_256	3300034151	Sediment	KANRFIGENRDETIRILARYVPQSVETAARSYDVELKALAKDGQMTDTEIEFQMDRLAEKRRPLDEVRDFSFARQALKELESGK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F068536

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences