Metagenome Family F068525

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F068525
Family Type	Metagenome
Number of Sequences	124
Average Sequence Length	91 residues
Representative Sequence	VSKVENELKEKIEEIIRQKAESSITDELSDSEHGYVDALIWLKEGSIQLTNEGIGKEIVERTYADKDSSKEYCDGYDSALKLVLKMLIELKK
Number of Associated Samples	95
Number of Associated Scaffolds	124

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	47.58 %
% of genes near scaffold ends (potentially truncated)	22.58 %
% of genes from short scaffolds (< 2000 bps)	79.84 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.83

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Unclassified (62.097 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland (19.355 % of family members)
Environment Ontology (ENVO)	Unclassified (50.806 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (34.677 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.83% β-sheet: 0.00% Coil/Unstructured: 44.17%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.83
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.83
Powered by PDBe Molstar

SCOP family	SCOP domain	Representative PDB	TM-score
a.185.1.1: Gametocyte protein Pfg27	d1n81a_	1n81	0.60867
a.60.10.1: Enzyme I of the PEP:sugar phosphotransferase system HPr-binding (sub)domain	d1zyma1	1zym	0.60396
a.209.1.1: ADP-ribosylglycohydrolase	d1t5ja1	1t5j	0.60122
a.132.1.2: Heme oxygenase HemO (PigA)	d1sk7a_	1sk7	0.59642
c.80.1.2: Phosphoglucose isomerase, PGI	d3ff1a1	3ff1	0.58766

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 124 Family Scaffolds
PF14947	HTH_45	2.42
PF00535	Glycos_transf_2	2.42
PF00808	CBFD_NFYB_HMF	1.61
PF01037	AsnC_trans_reg	1.61
PF13439	Glyco_transf_4	1.61
PF01850	PIN	1.61
PF02310	B12-binding	1.61
PF00126	HTH_1	1.61
PF13650	Asp_protease_2	0.81
PF03358	FMN_red	0.81
PF12773	DZR	0.81
PF02517	Rce1-like	0.81
PF01613	Flavin_Reduct	0.81
PF02518	HATPase_c	0.81
PF06197	DUF998	0.81
PF13531	SBP_bac_11	0.81
PF13404	HTH_AsnC-type	0.81
PF01548	DEDD_Tnp_IS110	0.81
PF13894	zf-C2H2_4	0.81
PF00132	Hexapep	0.81
PF00589	Phage_integrase	0.81
PF04967	HTH_10	0.81
PF07758	DUF1614	0.81
PF13360	PQQ_2	0.81
PF02371	Transposase_20	0.81
PF10086	YhfC	0.81
PF00899	ThiF	0.81
PF00174	Oxidored_molyb	0.81
PF01837	HcyBio	0.81
PF00365	PFK	0.81
PF13426	PAS_9	0.81
PF13191	AAA_16	0.81

COG ID	Name	Functional Category	% Frequency in 124 Family Scaffolds
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.61
COG0205	6-phosphofructokinase	Carbohydrate transport and metabolism [G]	0.81
COG1266	Membrane protease YdiL, CAAX protease family	Posttranslational modification, protein turnover, chaperones [O]	0.81
COG1853	FMN reductase RutF, DIM6/NTAB family	Energy production and conversion [C]	0.81
COG1900	Sulfur incorporation enzyme MA1821 (anaerobic homocysteine biosynthesis), HcyBio/DUF39 family	Amino acid transport and metabolism [E]	0.81
COG2041	Molybdopterin-dependent catalytic subunit of periplasmic DMSO/TMAO and protein-methionine-sulfoxide reductases	Energy production and conversion [C]	0.81
COG3371	Uncharacterized membrane protein	Function unknown [S]	0.81
COG3915	Uncharacterized conserved protein	Function unknown [S]	0.81
COG4089	Uncharacterized membrane protein	Function unknown [S]	0.81
COG4449	Predicted protease, Abi (CAAX) family	General function prediction only [R]	0.81

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.10 %
All Organisms	root	All Organisms	37.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.10 %
cellular organisms	root	All Organisms → cellular organisms	37.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.10 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	32.26 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	5.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.10 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	17.74 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	3.23 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	2.42 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.42 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	0.81 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.81 %
unclassified Archaea	no rank	All Organisms → cellular organisms → Archaea → unclassified Archaea	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.10 %
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	12.90 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	2.42 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	1.61 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.61 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.81 %
Crenarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota	0.81 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.81 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	0.81 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.10 %
unclassified Candidatus Bathyarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota	12.10 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2.42 %
Methanomicrobia	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	1.61 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.61 %
Patescibacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group	0.81 %
Nitrososphaeria	class	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria	0.81 %
Thermoprotei	class	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei	0.81 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.81 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.10 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	10.48 %
Cytophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia	1.61 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.61 %
Parcubacteria group	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group	0.81 %
Candidatus Bathyarchaeota archaeon RBG_13_46_16b	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon RBG_13_46_16b	0.81 %
Candidatus Bathyarchaeota archaeon RBG_13_60_20	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon RBG_13_60_20	0.81 %
Sphingobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia	0.81 %
Nitrososphaerales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales	0.81 %
Methanocellales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanocellales	0.81 %
Thermoprotei	class	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei	0.81 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.81 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.10 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	10.48 %
Cytophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales	1.61 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.61 %
unclassified Nitrososphaerales	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales	0.81 %
Candidatus Portnoybacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Portnoybacteria	0.81 %
Sphingobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	0.81 %
Methanocellaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanocellales → Methanocellaceae	0.81 %
Candidatus Bathyarchaeota archaeon RBG_13_46_16b	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon RBG_13_46_16b	0.81 %
Candidatus Bathyarchaeota archaeon RBG_13_60_20	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon RBG_13_60_20	0.81 %
Thermoprotei	class	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei	0.81 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.81 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.10 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	10.48 %
unclassified Cytophagales	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → unclassified Cytophagales	1.61 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.61 %
Candidatus Portnoybacteria bacterium RBG_13_41_18	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Portnoybacteria → Candidatus Portnoybacteria bacterium RBG_13_41_18	0.81 %
Nitrososphaerales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	0.81 %
Sphingobacteriaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae	0.81 %
Methanocella	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanocellales → Methanocellaceae → Methanocella	0.81 %
Candidatus Bathyarchaeota archaeon RBG_13_46_16b	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon RBG_13_46_16b	0.81 %
Candidatus Bathyarchaeota archaeon RBG_13_60_20	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon RBG_13_60_20	0.81 %
Thermoprotei	class	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei	0.81 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.81 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.10 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	10.48 %
Cytophagales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → unclassified Cytophagales → Cytophagales bacterium	1.61 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.61 %
Mucilaginibacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Mucilaginibacter	0.81 %
Methanocella conradii	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanocellales → Methanocellaceae → Methanocella → Methanocella conradii	0.81 %
Candidatus Portnoybacteria bacterium RBG_13_41_18	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Portnoybacteria → Candidatus Portnoybacteria bacterium RBG_13_41_18	0.81 %
Nitrososphaerales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	0.81 %
Candidatus Bathyarchaeota archaeon RBG_13_46_16b	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon RBG_13_46_16b	0.81 %
Candidatus Bathyarchaeota archaeon RBG_13_60_20	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon RBG_13_60_20	0.81 %
Thermoprotei	class	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei	0.81 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.81 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.10 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	10.48 %
Cytophagales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → unclassified Cytophagales → Cytophagales bacterium	1.61 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.61 %
unclassified Mucilaginibacter	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Mucilaginibacter → unclassified Mucilaginibacter	0.81 %
Methanocella conradii	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanocellales → Methanocellaceae → Methanocella → Methanocella conradii	0.81 %
Candidatus Portnoybacteria bacterium RBG_13_41_18	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Portnoybacteria → Candidatus Portnoybacteria bacterium RBG_13_41_18	0.81 %
Nitrososphaerales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	0.81 %
Candidatus Bathyarchaeota archaeon RBG_13_46_16b	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon RBG_13_46_16b	0.81 %
Candidatus Bathyarchaeota archaeon RBG_13_60_20	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon RBG_13_60_20	0.81 %
Thermoprotei	class	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei	0.81 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.81 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	0.81 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.10 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	10.48 %
Cytophagales bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → unclassified Cytophagales → Cytophagales bacterium	1.61 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.61 %
Mucilaginibacter sp. X5P1	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Mucilaginibacter → unclassified Mucilaginibacter → Mucilaginibacter sp. X5P1	0.81 %
Methanocella conradii	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanocellales → Methanocellaceae → Methanocella → Methanocella conradii	0.81 %
Candidatus Portnoybacteria bacterium RBG_13_41_18	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Portnoybacteria → Candidatus Portnoybacteria bacterium RBG_13_41_18	0.81 %
Nitrososphaerales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	0.81 %
Candidatus Bathyarchaeota archaeon RBG_13_46_16b	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon RBG_13_46_16b	0.81 %
Candidatus Bathyarchaeota archaeon RBG_13_60_20	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon RBG_13_60_20	0.81 %
Thermoprotei	class	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei	0.81 %
archaeon	species	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	0.81 %
DPANN group	clade	All Organisms → cellular organisms → Archaea → DPANN group	0.81 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_105009985	Not Available	679	Open in IMG/M
3300001213\|JGIcombinedJ13530_108179376	Not Available	620	Open in IMG/M
3300001547\|JGI20215J15232_1021385	Not Available	882	Open in IMG/M
3300003432\|JGI20214J51088_10007712	All Organisms → cellular organisms → Bacteria → Proteobacteria	7140	Open in IMG/M
3300003432\|JGI20214J51088_10158654	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → unclassified Nitrososphaerales → Nitrososphaerales archaeon	1598	Open in IMG/M
3300003432\|JGI20214J51088_10959542	Not Available	561	Open in IMG/M
3300003432\|JGI20214J51088_10962218	Not Available	561	Open in IMG/M
3300003432\|JGI20214J51088_11147575	Not Available	511	Open in IMG/M
3300003541\|JGI20214J51650_10039787	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	3100	Open in IMG/M
3300003541\|JGI20214J51650_10393424	Not Available	967	Open in IMG/M
3300003541\|JGI20214J51650_11079674	Not Available	559	Open in IMG/M
3300004282\|Ga0066599_100149955	Not Available	1197	Open in IMG/M
3300005208\|Ga0069003_10009194	Not Available	1202	Open in IMG/M
3300005263\|Ga0071346_1092355	All Organisms → cellular organisms → Archaea	4282	Open in IMG/M
3300006864\|Ga0066797_1300413	Not Available	560	Open in IMG/M
3300006949\|Ga0075528_10230502	Not Available	506	Open in IMG/M
3300006950\|Ga0075524_10050829	Not Available	1717	Open in IMG/M
3300006950\|Ga0075524_10497527	Not Available	542	Open in IMG/M
3300009009\|Ga0105105_10758721	Not Available	582	Open in IMG/M
3300009029\|Ga0066793_10597386	Not Available	629	Open in IMG/M
3300009053\|Ga0105095_10763864	Not Available	540	Open in IMG/M
3300009078\|Ga0105106_10551689	Not Available	827	Open in IMG/M
3300009085\|Ga0105103_10569998	Not Available	641	Open in IMG/M
3300009166\|Ga0105100_10742070	Not Available	607	Open in IMG/M
3300009168\|Ga0105104_10254539	Not Available	959	Open in IMG/M
3300009547\|Ga0116136_1189411	Not Available	513	Open in IMG/M
3300009616\|Ga0116111_1125439	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	626	Open in IMG/M
3300009632\|Ga0116102_1105023	Not Available	808	Open in IMG/M
3300009639\|Ga0116122_1075313	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → unclassified Cytophagales → Cytophagales bacterium	1114	Open in IMG/M
3300009643\|Ga0116110_1178418	Not Available	695	Open in IMG/M
3300009644\|Ga0116121_1155764	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	722	Open in IMG/M
3300009645\|Ga0116106_1041794	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1548	Open in IMG/M
3300009764\|Ga0116134_1129950	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon RBG_13_60_20	897	Open in IMG/M
3300010339\|Ga0074046_10046583	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	2892	Open in IMG/M
3300010341\|Ga0074045_10037929	All Organisms → cellular organisms → Archaea	3573	Open in IMG/M
3300010341\|Ga0074045_10042121	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanocellales → Methanocellaceae → Methanocella → Methanocella conradii	3353	Open in IMG/M
3300010379\|Ga0136449_104444727	Not Available	516	Open in IMG/M
3300011340\|Ga0151652_13300586	Not Available	560	Open in IMG/M
3300014261\|Ga0075360_1087771	Not Available	594	Open in IMG/M
3300014490\|Ga0182010_10264078	Not Available	917	Open in IMG/M
3300014490\|Ga0182010_10303721	Not Available	857	Open in IMG/M
3300014490\|Ga0182010_10419851	Not Available	731	Open in IMG/M
3300014490\|Ga0182010_10529584	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	653	Open in IMG/M
3300014490\|Ga0182010_10660124	Not Available	587	Open in IMG/M
3300014491\|Ga0182014_10065280	Not Available	2383	Open in IMG/M
3300014496\|Ga0182011_10577223	Not Available	717	Open in IMG/M
3300014498\|Ga0182019_10360044	Not Available	984	Open in IMG/M
3300014502\|Ga0182021_10004094	Not Available	17083	Open in IMG/M
3300014502\|Ga0182021_10032955	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	6094	Open in IMG/M
3300014502\|Ga0182021_10184722	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Patescibacteria group → Parcubacteria group → Candidatus Portnoybacteria → Candidatus Portnoybacteria bacterium RBG_13_41_18	2433	Open in IMG/M
3300014502\|Ga0182021_11546103	All Organisms → cellular organisms → Archaea	799	Open in IMG/M
3300014839\|Ga0182027_10127356	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	3026	Open in IMG/M
3300014839\|Ga0182027_10221548	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	2182	Open in IMG/M
3300017823\|Ga0187818_10354712	All Organisms → cellular organisms → Archaea → DPANN group	648	Open in IMG/M
3300017925\|Ga0187856_1062376	Not Available	1584	Open in IMG/M
3300017925\|Ga0187856_1077087	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Cytophagia → Cytophagales → unclassified Cytophagales → Cytophagales bacterium	1375	Open in IMG/M
3300017929\|Ga0187849_1078699	Not Available	1445	Open in IMG/M
3300017935\|Ga0187848_10037154	Not Available	2418	Open in IMG/M
3300017940\|Ga0187853_10277327	Not Available	763	Open in IMG/M
3300017959\|Ga0187779_10128195	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	1550	Open in IMG/M
3300017959\|Ga0187779_10271722	Not Available	1078	Open in IMG/M
3300017973\|Ga0187780_10468972	All Organisms → cellular organisms → Archaea → TACK group	897	Open in IMG/M
3300017974\|Ga0187777_10447376	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales → Sphingobacteriaceae → Mucilaginibacter → unclassified Mucilaginibacter → Mucilaginibacter sp. X5P1	898	Open in IMG/M
3300017974\|Ga0187777_10501980	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	848	Open in IMG/M
3300017988\|Ga0181520_10076412	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon RBG_13_46_16b	2988	Open in IMG/M
3300017996\|Ga0187891_1001539	All Organisms → cellular organisms → Archaea	19479	Open in IMG/M
3300018003\|Ga0187876_1090732	All Organisms → cellular organisms → Archaea → TACK group → Crenarchaeota → Thermoprotei	1153	Open in IMG/M
3300018003\|Ga0187876_1226297	Not Available	618	Open in IMG/M
3300018016\|Ga0187880_1261210	All Organisms → cellular organisms → Archaea → TACK group	759	Open in IMG/M
3300018017\|Ga0187872_10296776	Not Available	708	Open in IMG/M
3300018019\|Ga0187874_10141329	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1023	Open in IMG/M
3300018022\|Ga0187864_10043558	Not Available	2564	Open in IMG/M
3300018026\|Ga0187857_10439292	Not Available	587	Open in IMG/M
3300018033\|Ga0187867_10297101	All Organisms → cellular organisms → Archaea → TACK group	904	Open in IMG/M
3300018033\|Ga0187867_10418803	Not Available	741	Open in IMG/M
3300018035\|Ga0187875_10104163	Not Available	1610	Open in IMG/M
3300018037\|Ga0187883_10447575	Not Available	663	Open in IMG/M
3300018038\|Ga0187855_10312789	Not Available	918	Open in IMG/M
3300018040\|Ga0187862_10795689	Not Available	548	Open in IMG/M
3300018043\|Ga0187887_10348026	Not Available	874	Open in IMG/M
3300018046\|Ga0187851_10658763	Not Available	591	Open in IMG/M
3300018047\|Ga0187859_10281840	All Organisms → cellular organisms → Archaea	897	Open in IMG/M
3300018047\|Ga0187859_10901564	Not Available	509	Open in IMG/M
3300018057\|Ga0187858_10436492	Not Available	808	Open in IMG/M
3300018060\|Ga0187765_10920081	Not Available	593	Open in IMG/M
3300018062\|Ga0187784_10559560	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	920	Open in IMG/M
3300018085\|Ga0187772_10805896	Not Available	678	Open in IMG/M
3300018085\|Ga0187772_10888085	Not Available	647	Open in IMG/M
3300018086\|Ga0187769_10017900	All Organisms → cellular organisms → Archaea	4650	Open in IMG/M
3300019785\|Ga0182022_1106788	Not Available	676	Open in IMG/M
3300025432\|Ga0208821_1066207	Not Available	618	Open in IMG/M
3300025453\|Ga0208455_1091415	Not Available	589	Open in IMG/M
3300025582\|Ga0209386_1009075	All Organisms → cellular organisms → Archaea	2090	Open in IMG/M
3300025852\|Ga0209124_10050021	Not Available	1738	Open in IMG/M
3300025865\|Ga0209226_10290958	Not Available	689	Open in IMG/M
3300025888\|Ga0209540_10108300	Not Available	1700	Open in IMG/M
3300025891\|Ga0209585_10023764	All Organisms → cellular organisms → Archaea → unclassified Archaea → archaeon	2224	Open in IMG/M
3300025967\|Ga0210136_1063551	Not Available	569	Open in IMG/M
3300027887\|Ga0208980_10422938	Not Available	767	Open in IMG/M
3300027896\|Ga0209777_10023180	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	6072	Open in IMG/M
3300027899\|Ga0209668_10461253	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	839	Open in IMG/M
3300027900\|Ga0209253_10119314	All Organisms → cellular organisms → Archaea	2152	Open in IMG/M
3300027905\|Ga0209415_10219262	All Organisms → cellular organisms → Archaea	1763	Open in IMG/M
3300027905\|Ga0209415_10794956	Not Available	660	Open in IMG/M
3300029984\|Ga0311332_11231695	Not Available	604	Open in IMG/M
3300030114\|Ga0311333_11468172	Not Available	588	Open in IMG/M
3300031232\|Ga0302323_101120443	Not Available	878	Open in IMG/M
3300031344\|Ga0265316_10740620	Not Available	691	Open in IMG/M
3300031726\|Ga0302321_100979608	All Organisms → cellular organisms → Archaea → Euryarchaeota	962	Open in IMG/M
3300031949\|Ga0214473_10401183	All Organisms → cellular organisms → Archaea → TACK group	1548	Open in IMG/M
3300032805\|Ga0335078_10141428	All Organisms → cellular organisms → Archaea → Euryarchaeota	3417	Open in IMG/M
3300032892\|Ga0335081_10074163	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	5185	Open in IMG/M
3300032892\|Ga0335081_10494743	All Organisms → cellular organisms → Archaea	1540	Open in IMG/M
3300032897\|Ga0335071_10026065	All Organisms → cellular organisms → Archaea	5832	Open in IMG/M
3300032897\|Ga0335071_11657583	Not Available	584	Open in IMG/M
3300033158\|Ga0335077_10705468	Not Available	1039	Open in IMG/M
3300033402\|Ga0326728_10045043	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	6687	Open in IMG/M
3300033402\|Ga0326728_10878953	Not Available	639	Open in IMG/M
3300033405\|Ga0326727_10969157	Not Available	625	Open in IMG/M
3300033433\|Ga0326726_11005194	Not Available	810	Open in IMG/M
3300033487\|Ga0316630_12294985	Not Available	500	Open in IMG/M
3300034123\|Ga0370479_0053896	All Organisms → cellular organisms → Archaea	1009	Open in IMG/M
3300034123\|Ga0370479_0248810	Not Available	513	Open in IMG/M
3300034128\|Ga0370490_0171436	Not Available	712	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	99.19%
Host-Associated	Host-Associated	0.81%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.00%
Aquatic	Environmental → Aquatic	49.19%
Plants	Host-Associated → Plants	0.81%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	43.55%
Freshwater	Environmental → Aquatic → Freshwater	39.52%
Marine	Environmental → Aquatic → Marine	9.68%
Peat	Environmental → Terrestrial → Peat	6.45%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.81%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	33.87%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	29.84%
Wetlands	Environmental → Aquatic → Marine → Wetlands	9.68%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	9.68%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	6.45%
Sediment	Environmental → Aquatic → Freshwater → Sediment	5.65%
Lentic	Environmental → Aquatic → Freshwater → Lentic	2.42%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.81%
Pond	Environmental → Aquatic → Freshwater → Pond	0.81%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.81%

Habitat	Taxonomy	Distribution
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	20.16%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	20.16%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	13.71%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	8.87%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	8.06%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	6.45%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	6.45%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	5.65%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	2.42%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	2.42%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.61%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.81%
Sediment	Environmental → Aquatic → Freshwater → Pond → Sediment	0.81%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.81%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.81%

Habitat	Taxonomy	Distribution
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	19.35%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	11.29%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	8.87%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	8.06%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	8.06%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	6.45%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.65%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	4.84%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	3.23%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	3.23%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	2.42%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	2.42%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	2.42%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	2.42%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	1.61%
Anaerobic Enrichment Culture	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Anaerobic Enrichment Culture	0.81%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.81%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.81%
Wetland	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Wetland	0.81%
Wetland	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Wetland	0.81%
Freshwater	Environmental → Aquatic → Freshwater → Pond → Sediment → Freshwater	0.81%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.81%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.81%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.81%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.81%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.81%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300001547	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site C1 Bulk	Environmental	Open in IMG/M
3300003432	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300003541	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental	Open in IMG/M
3300004282	Freshwater pond sediment microbial communities from the University of Edinburgh, under environmental carbon perturbations - Initial sediment	Environmental	Open in IMG/M
3300005208	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailA_D2	Environmental	Open in IMG/M
3300005263	Freshwater pond sediment microbial communities from Middleton WI, enriched with Humic Acid Only under anaerobic conditions - HA Sample 3	Environmental	Open in IMG/M
3300006864	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 3 DNA2013-193	Environmental	Open in IMG/M
3300006949	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost159B-16B	Environmental	Open in IMG/M
3300006950	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one	Environmental	Open in IMG/M
3300009009	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009085	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009547	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40	Environmental	Open in IMG/M
3300009616	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_100	Environmental	Open in IMG/M
3300009632	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40	Environmental	Open in IMG/M
3300009639	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40	Environmental	Open in IMG/M
3300009643	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_8_40	Environmental	Open in IMG/M
3300009644	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300009764	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_40	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011340	Combined Assembly of Wetland Metatranscriptomes	Environmental	Open in IMG/M
3300014261	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_TuleC_D1	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014491	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2D metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017823	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_3	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental	Open in IMG/M
3300017935	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_40	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300017996	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_40	Environmental	Open in IMG/M
3300018003	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_40	Environmental	Open in IMG/M
3300018016	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_40	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018033	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_10	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018057	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_150	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018086	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MG	Environmental	Open in IMG/M
3300019785	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300025432	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40 (SPAdes)	Environmental	Open in IMG/M
3300025453	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40 (SPAdes)	Environmental	Open in IMG/M
3300025582	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-two (SPAdes)	Environmental	Open in IMG/M
3300025852	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-22A (SPAdes)	Environmental	Open in IMG/M
3300025865	Arctic peat soil from Barrow, Alaska, USA - Barrow Graham LP Ref core NGADG0011-212 (SPAdes)	Environmental	Open in IMG/M
3300025888	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-21A (SPAdes)	Environmental	Open in IMG/M
3300025891	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE Permafrost154B-one (SPAdes)	Environmental	Open in IMG/M
3300025967	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailC_D2 (SPAdes)	Environmental	Open in IMG/M
3300027887	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 Bulk	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300029984	I_Fen_E1 coassembly	Environmental	Open in IMG/M
3300030114	I_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031344	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG	Host-Associated	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031949	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033405	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB29MY	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300034123	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_01D_15	Environmental	Open in IMG/M
3300034128	Peat soil microbial communities from wetlands in Alaska, United States - Frozen_pond_06D_16	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1050099851	3300001213	Wetland	MSDVENELKEKIDELIRLTAESATDELSDSEHGYVDALIWLKEGSIQLTNEGIGREMVNRTYADPQQSTIYYEGYDSALKQVLKILIELKNP*
JGIcombinedJ13530_1081793761	3300001213	Wetland	VSKAEDKLKEKIDEMLRQKAESCEEDEFPDSDHGYVDALIWLKEGSIQLTKEGIGKEIEKRKYADPNQRTEYYEGYESALEMVLKIRADMKE*
JGI20215J15232_10213851	3300001547	Wetland	VSKVENELKEKINEIIRQKAESSISDELSDSEHGYVDALIWLKEGSIQLTNEGIGKEIMERTYADKDSSKEYCDGYDSALKLVLKMLIELKK*
JGI20214J51088_100077123	3300003432	Wetland	VSKVESELKEKIEEIIRQKAESSTSDEPSDSEHGFIDALLWLKEGSIQLTNEGIGKEIVERTYADKDPSREYCDGYDSALKLVLKMLIELKK*
JGI20214J51088_101586543	3300003432	Wetland	VSKVESELKEKIDEIIRQKAESSVSDELSDSEHGFIDALIWLKEGSIQLTNEGIGKEIVEQTYADKDASKEYCDGYDSALKLVLKILNEFKK*
JGI20214J51088_109595421	3300003432	Wetland	VSKVEKELKEKIEEIIRQKAESSTDELSDSEHGYVDALIWLKEGSIQLTNEGIGKEIIELTYADKDPSKEYCVGYTSALRLVLKMLIELKK*
JGI20214J51088_109622181	3300003432	Wetland	VSKVESELKEKIEEIIRQKAESSLTDELSDSEHGYIDALIWLKEGSIQLTNEGIGKEIVERAYADKDPNKEYCSGYDSALKLVLKMLMELKK*
JGI20214J51088_111475751	3300003432	Wetland	MSKVESELKEKIEEIIRQKAESSLTDELSDSEHGYIDALIWLKEGSIQLTNEGIGKEIVERTYADKDPNKEYCNGYDSALKLVLKMLMELKK*
JGI20214J51650_100397874	3300003541	Wetland	VSKVESELKEKIEEIIXQKAESSTSDEPSDSEHGFIDALLWLKEGSIQLTNEGIGKEIVERTYADKDPSREYCDGYDSALKLVLKMLIELKK*
JGI20214J51650_103934242	3300003541	Wetland	VSKVESELKEKIEEIIRQKAESSLTDELSDSEHGYIDALIWLKEGSIQLTNEGIGKEIVERTYADKDPNKEYCNGYDSALKLVLKMLMELKK*
JGI20214J51650_110796741	3300003541	Wetland	MSSVEDQLKEKIDELIRQKAESSSDEPSDFDHGYVDALIWLKEGSIPLSDEGLRKEIAQRTYADAGAGKEYCEGYDNALKQVKKILSELKK*
Ga0066599_1001499553	3300004282	Freshwater	VSKVENELKEKIEEIIRQKAESSTTDELSDSEHGYIDALIWLKEGSIQLTNEGIGKEIVVRTYADKDPSKEYCDGYDSALKLVLKLLIELKK*
Ga0069003_100091943	3300005208	Natural And Restored Wetlands	ELKEKIEEIIRQKAESSTSDEPSDSEHGFIDALLWLKEGSIQLTNEGIGKEIVERTYADKDPSREYCDGYDSALKLVLKMLIELKK*
Ga0071346_10923555	3300005263	Anaerobic Enrichment Culture	MCWVSRQLFNSITNKYGIGENEVSKVETELKEKIEEIIRQKAESSTDELSDSEHGFIDALIWLKEGSIQLTNEGIGKEIIELTYADKDPSKEYCDGYGAALELVLKMLNKLKK*
Ga0066797_13004132	3300006864	Soil	VSKVENELKEKIEEIIRQKAESSITDELSDSEHGYVDALIWLKEGSIQLTNEGIEKEIVERTYADKDPSKEYCDGYDSALKLVLRMLIELKK*
Ga0075528_102305022	3300006949	Arctic Peat Soil	VSKVENELKEKIEEIIRQKAESSTTDELSDSEHGYVDALIWLKEGSIQLTNEGIGKEIVEQTYTDKDSSKEYCDGYDSALKQVLKMLIELKK*
Ga0075524_100508292	3300006950	Arctic Peat Soil	VSKVESELKEKIEEIIRQKAESSITDKFSESEHGYVDALIWLKEGSIQLTYEGIGKEIVERTYADKDSSKEYCDGYDSALKQVLKMLIELKK*
Ga0075524_104975271	3300006950	Arctic Peat Soil	VSKVENELKEKIEEIIRQKAESSMTDELSDSEHGYIDALIWLKEGSIQLTNEGIGKEIVAQIYADKNPSKEYCDGYDSALKLVLKMLIELKK*
Ga0105105_107587211	3300009009	Freshwater Sediment	VSKVENELKERIEQIIRHKAESSTDELSDSEHGYVDALIWLKEGSIQLTNEGITKEIMERRYADKDPSKEYCDGYDSALKLVLKTLIELKNKVS*
Ga0066793_105973861	3300009029	Prmafrost Soil	VSKVENELKEKIEEIIRQKAESSITDELSDSEHGYVDALIWLKEGSIQLTNEGIGKEIVERTYADKDSSKEYCDGYDSALKLVLKMLIELKK*
Ga0105095_107638641	3300009053	Freshwater Sediment	VSRVENELKIKIEEIIRQKAESSVTDELSDSEHGYVDALIWFKEGSIQLTNEGIGKEIVERTYADKDSSKEYCDGYDSALKLVLKMLNELKKIVYSNDSL*
Ga0105106_105516891	3300009078	Freshwater Sediment	VSKVENELKEKIEEIIRQKAESSITDELSDSEHGYIDALIWLKEGSIQLTNEGIGKEIVAQTYADKNPSKEYCNGYDSALKLVLKMLIELKK*
Ga0105103_105699981	3300009085	Freshwater Sediment	VSKIENELKERIEQIIRHKAESSTDELSDSEHGYVDALIWLKEGSIQLTNEGITKEIIERTYADKDPSKEYCDGYDSALKLVLKILLELKNSIS*
Ga0105100_107420701	3300009166	Freshwater Sediment	VSKVENGLKEKIEEIIRQKAESSITDELSDSEHGYIDALIWLKEGSIQLTNEGIGKEIVQRTYADKDPSKEYLDGYDSALKLVLKILNELKK*
Ga0105104_102545391	3300009168	Freshwater Sediment	IIRQKAESSITDELSDSEHGYIDALIWLKEGSIQLTNEGIGKEIVAQTYADKNPSKEYCNGYDSALKLVLKMLIELKK*
Ga0116136_11894111	3300009547	Peatland	LKEKIDEVIRQKAESSETDELSNSEHGYVDALIWLKEGSIQLTNEGIEKEIVERTYADPDQSKEYYDGYDSALKLVLRTLIELKK*
Ga0116111_11254391	3300009616	Peatland	ELKEKIEELIRQMAESSVTDELSDSEHGYVDALIWLKEGSIQLTNEGIGKEMMERTYADKDQSKEYCDGYDSALKLVLKMLIELKKQYILNE*
Ga0116102_11050231	3300009632	Peatland	VSKVESELKEKIEEIIRQKAESSETELSDSEHGYVDALIWLKEGSIQLTNEGIGKEIVERTYADKDPSKEYCDGYDSALKLVLKMLIELKK*
Ga0116122_10753131	3300009639	Peatland	VSKVENELKEKIEEILRQKAESSETDELSDSEHGYVDALIWLKEGSIQLTNEGIGKEIVERTYADKDPSKEYCDGYDSALQLVLKMLIELKK*
Ga0116110_11784182	3300009643	Peatland	VSKVENELKEKIEEILRQKAESSETDELSDSEHGYVDALIWLKEGSIQLTNEGIGKEIMERTYADPDQSKEYYECYDSALKQVLKML
Ga0116121_11557642	3300009644	Peatland	VETKLKENIEDIIRQKAESSQTDELSDSEHGYVDALIWLKEGSIQLTNEGIGKEIVERTYADKDPSKEYCDGYDSALKLVLKMLIELKK*
Ga0116106_10417942	3300009645	Peatland	VSKVENELKEKIDEVIRQKAESSESDELSNSEHGYVDALIWLKEGSIQLTNEGIEKEIVERTYADPDQSKEYYDGYDSALKLVLRTLIELKK*
Ga0116134_11299502	3300009764	Peatland	VSKVETELKGKIEELIRQKAESAETDELSDLEHGYVDALIWLKEGSIQLTNEGIGKEIVERTYADKDPSKEYLDGYDSALKLVLKILIELKK*
Ga0074046_100465833	3300010339	Bog Forest Soil	MGEKEVSKVENELKEKIEGVIRQKAESSESDELSNSEHGYVDALIWLKEGSIQLSNEGIEKEIVERTYADPDQSKEYYDGYDSALKLVLKMLIELKK*
Ga0074045_100379294	3300010341	Bog Forest Soil	VSKVEGELKGKIEELIRQKAESSVTDELSDSEHGYVDALIWLKEGSIQLTNEGIGKEVVERKYADSDQSKEYVDGYDSALQLVLKTLIELKK*
Ga0074045_100421211	3300010341	Bog Forest Soil	MGEKEVSKVENELKEKIEGVIRQKAESSESDELSNSEHGYVDALIWLKEGSIQLSNEGIEKEIVERTYADPDQNKEYYDGYDSALKLVLKMLIELKK*
Ga0136449_1044447271	3300010379	Peatlands Soil	VSNVETELKEKIEEIIRQKAESSETDELSDSEHGYVDALIWLKEGSIQLTNEGIGKEIVERTYADKDSSKEYCDGYDSALKLVLKMLIELKK*
Ga0151652_133005861	3300011340	Wetland	KAESSTSDEPSDSEHGFIDALLWLKEGSIQLTNEGIGKEIVERTYADKDPSREYCDGYDSALKLVLKMLIEFKK*
Ga0075360_10877711	3300014261	Natural And Restored Wetlands	NELKEKIEEIIRQKAESSLTDELSDSEHGYIDALIWLKEGSIQLTNEGIGKEIVERAYADKDPNKEYCSGYDSALKLVLKMLMELKK*
Ga0182010_102640782	3300014490	Fen	VSKVENELKEKIEEIIRQKAESSTTDELSDSEHGYVDALIWLKEGSIQLSNEGIGKEIVERTYADKDSSKEYLDGYDSALKLVLKILIELKK*
Ga0182010_103037212	3300014490	Fen	VSKVENELKEKIEEIIRQKAESATDELSDSEHGYLDALIWLKEGSIPLTNEGIGKEIVKRTYADPDQSKEYYDSYDSALKLVLKMLIELKK*
Ga0182010_104198511	3300014490	Fen	VSKVERELKEKIEEIIRQKAESSVTDELSDSEHGYVDALIWLKEGSIQLTNEGIGKEIVERTYADKDSSKEYCDGYDSALKLVLKILIELKK*
Ga0182010_105295841	3300014490	Fen	VSKVEAELKEKIEEIIRQKAESSLTDELSDSEHGYVDALIWLKEGSIQLTNAGIGKEIVERTYADKDSSKEYCDGYDSALKLVLKMLIELKK*
Ga0182010_106601241	3300014490	Fen	MSKVENELKEKIEELIRQKAESSTDELSDSEHGFVDALIWLKEGSIKLTNEGIGNEIVERTYADKDSSKEYCDGYDSALKLVLKMLIELKK*
Ga0182014_100652802	3300014491	Bog	VSKVENELKEKINEIIKQKAEASETDELSDSEHGYVDALIWLKEGSIQLTNEGLEKEMVERTYADPDQTTEYYVGYDSALKLVLKTLIELENRVA*
Ga0182011_105772231	3300014496	Fen	VSKVENELKEKIDEVIRQKAESATDELSDSEHGYVDALIWLKEGSIPLTDEGIGKEIVERTYADKDPSREYCDGYDSALKL
Ga0182019_103600442	3300014498	Fen	VSKVENELKGKIEEIIRQKAESSVTDELSDSEHGYVDALIWLKEGSIQLTNEGIGKEIVEQTYADKDSSKEYCDGYDSALKLVLKKLIELKKKYILNESH*
Ga0182021_1000409423	3300014502	Fen	EEIIRQKAESSVTDELSDSEHGYVDALIWLKEGSIQLTNEGIGKEIVEQTYADKDSSKEYCDGYDSALKLVLKMLIELKK*
Ga0182021_100329557	3300014502	Fen	VSNVENELKETIEEIIRQKAESSVTDELSDSEHGYVDALIWLKEGSIQLTNEGIGKEIVEQTYADKDSSKEYCDGYDSALKLVLKKLIELKKKYILNESH*
Ga0182021_101847223	3300014502	Fen	VSKVEIALTEKIEEIIRQKAESSVTDELSDSEHGYVDVLIWLKEGSIQLTNEGIGKEIVEPTYADKDQSKEYYDGYDSALKQLLKILIDLKK*
Ga0182021_115461032	3300014502	Fen	VSKVENELKEKIEEIIRQKAESSTTDELSDSEHGFVDALIWLKDGFIKLTNEGIGNEIVERTYSDKDSSKEYCDGYDSALKLVLKMLIELKK*
Ga0182027_101273561	3300014839	Fen	KEKIEEIIRQKAESSTTDELSDSEHGYVDALIWLKEGSIQLTNEGIGKEIVERKYADPDQSKEYYEGYDSALKLVLKILIELKKQ*
Ga0182027_102215483	3300014839	Fen	VSKVENELKEKIDEVIRQKAESATDELSDSEHGYVDALIWLKEGSIPLTDEGIGKEIVERTYADKDPSREYCDGYDSALKLVLKMLIELKK*
Ga0187818_103547121	3300017823	Freshwater Sediment	VSNIENELKEKIEETIRQKAESSETDELSDSEHGYVDALIWLKEGSIQLTNEGIGKEIVERTYADPDQSKEYCDGYDSALKLVLKMLIELKK
Ga0187856_10623763	3300017925	Peatland	VSKVENGLKEKIEEIIRQKAESSETELSDSEHGYVDALIWLKEGSIQLTNEGIGKEIVERTYADKDPSKEYCDGYD
Ga0187856_10770874	3300017925	Peatland	VSKVENELKEKIEEILRQKAESSETDELSDSEHGYVDALIWLKEGSIQLTNEGIGKEIVERTYADKDPSKEYCDGYD
Ga0187849_10786992	3300017929	Peatland	VSKVENELKEKIEEILRQKAESSETDELSDSEHGYVDALIWLKEGSIQLTNEGIGKEIVERTYADKDPSKEYCDGYDSALKLVLKMLIELKK
Ga0187848_100371544	3300017935	Peatland	VSKVENELKEKIEEILRQKAESSETDELSDSEHGYVDALIWLKEGSIQLTNEGIGKEIVERTYADKDPSKEYCDGYDSALQLVLKMLIELKK
Ga0187853_102773271	3300017940	Peatland	VSKVENELKEKIEEILRQKAESSETDELSDSEHGYVDALIWLKEGSIQLTNEGIGKEIVERTYADKDPSKEYLDGYDSALKLVLKILIELKK
Ga0187779_101281951	3300017959	Tropical Peatland	VGSVDSELKEKIEEALRQKAESTKTDELSDSDHGYVDALIWLKEGSIQLTNEGIGKEIMDRKYADPDQSKQYYVGYDSALKLVLKMLH
Ga0187779_102717221	3300017959	Tropical Peatland	MSEVESKLKGKIDELIRQKAESSETDELSDSEHGYVDALMWLKEGSILLTKEGIGKEMVERSYADPDQNTEYYEGYDSALKLVLKTLIELQNSLTQ
Ga0187780_104689722	3300017973	Tropical Peatland	MSEVESELKGKIDEMIRRKAESSETDELSDSEHGYVDALMWLKEGSIQLTKEGIGKEMVERSYADPDQNTEYYEGYDSALKLVLKTLIELQNSLTQ
Ga0187777_104473761	3300017974	Tropical Peatland	VSKVEINLKEKIDEIIRQKAESTESDELSDSDHGYVDALMWLKEGSIQFTDEGIKNEIVKRSYADPDQNTEYYEGYDSALKLILEILVELKNS
Ga0187777_105019802	3300017974	Tropical Peatland	VSEAEIKIKEKIDEMLRRKAESSETDELPDSDHGYVDALIWLKEGSIQLTNEGIKKEMEMPKYADPDQCQEYYDGYQSALKAVQKALSDI
Ga0181520_100764123	3300017988	Bog	VSRVEDELKEKIGEIIRQKAESSETDELSESEHGYVDALIWLKEGSIQLTNEGIGKEIVERTYADPGLSTEYYDGYDSALRLVLKMLIELKK
Ga0187891_100153910	3300017996	Peatland	VSKVENELKEKIDEIIRQKAESSETELSDSEHGYVDALIWLKEGSIQLTNEGIGKEMVERIYADPDQSIEYYDGYDSALKLVLKTLIELKNSKF
Ga0187876_10907321	3300018003	Peatland	VENELKEKIDEIIRQKAESSETELSDSEHGYVDALIWLKEGSIQLTNEGIGKEMVERIYADPDQSIEYYDGYDSALKLVLKTLIELKNSKF
Ga0187876_12262972	3300018003	Peatland	VENELKEKIDEIIRQKAESSETELSDSEHGYVDALIWLKEGSIQLTNEGIGKEIVERTYADKDPSKEYCDGYDSALQLVLKMLIELKK
Ga0187880_12612101	3300018016	Peatland	VSKVESELKEKIEEIIRQKAESSETELSDSEHGYVDALIWLKEGSIQLTNEGIGKEIVERTYADKDPSKEYCDGYDSALKLVLKMLIELKK
Ga0187872_102967761	3300018017	Peatland	LLKEKIEEILRQKAESSETDELSDSEHGYVDALIWLKEGSIQLTNEGIGKEIVERTYADKDPSKEYCDGYDSALKLVLKMLIELKK
Ga0187874_101413291	3300018019	Peatland	VSKVENELKEKIEEIIRQKAESAETDELSDSEHGYVDALIWLKEGSIQLTNEGIGKEIVERTYADKDQSKEYYDGYDSALKLVLKMLIELKK
Ga0187864_100435585	3300018022	Peatland	VSKVENGLKEKIEEIIRQKAESSETELSDSEHGYVDALIWLKEGSIQLTNEGIGKEIVERTYADKDPSKEYCDGYDSALQLVLKMLIELKK
Ga0187857_104392921	3300018026	Peatland	ISKVENELKEKIEEIIRQKAESTETDELSDSEHGYMDALIWLKEGSIQLTNEGIGKEMLERTYADKNQNKEYCDGYDSALKLVLKMLIELKK
Ga0187867_102971011	3300018033	Peatland	IRQKAESAETDELSDLEHGYVDALIWLKEGSIQLTNEGIGKEIVERTYADPGLSTEYYDGYDSALRLVLKMLIELKK
Ga0187867_104188031	3300018033	Peatland	VSKVESELKEKIEEIIRQKAESSETDELSDSEHGYVDALIWLKEGSIQLTNEGIGKEIVERTYADKDPSKEYLDGYDSALKLLLKILIELKK
Ga0187875_101041631	3300018035	Peatland	VSKVENELKEKINEIIRQKAEASETYELSDSEHGYVDALIWLKEGSIQLTNEGLEKEMVERTYADKDQSTEYYDGYDSALKLVLKTLIELKK
Ga0187883_104475751	3300018037	Peatland	VSRVEDELKEKIGEIIRQKAESSETDELSDSEHGYVDALIWLKEGSIQLTNEGIGKEIVERTYADKDPSKEYLDGYDSALKLLLKILIELKK
Ga0187855_103127891	3300018038	Peatland	MGEREVSKVETELKGKIEELIRQKAESSETDELSDSEHGYVDALIWLKEGSIQLTNEGIGKEIMERTYADPDQSKEYYECYDSALKQVLKMLIELKK
Ga0187862_107956891	3300018040	Peatland	VSKVETELKGKIEELIRQKAESSETDELSDSEHGYVDALIWLKEGSIQLTNEGIGKEIMERTYADPDQSKEYYECYDSALKQVLKMLIELKK
Ga0187887_103480261	3300018043	Peatland	VSKVENELKEKINEIIRQKAEASETDELSDSEHGYVDALIWLKEGSIQLTNEGLEKEMVERTYADPDQTTEYYGGYDSALKLVLKTLIELENGVT
Ga0187851_106587632	3300018046	Peatland	VETELKGKIEELIRQKAESSETDELSDSEHGYVDALIWLKEGSIQLTNEGLEKEMVERTYADPDQTTEYYVGYDSALKLVLKILIELENRVA
Ga0187859_102818402	3300018047	Peatland	VSKVENELKEKIDEVIRQKAESSESDELSNSEHGYVDALIWLKEGSIQLTNEGIEKEIVERTYADPDQSKEYYDGYDSALKLVLRTLIELKK
Ga0187859_109015641	3300018047	Peatland	VSKVETELKEKIEEIIRQKAESSETDELSDSEHGYVDALIWLKEGSIQLTNEGIGKEIVERTYADKDPSKEYLDGYDSALKLLLKILIELKK
Ga0187858_104364921	3300018057	Peatland	MVVKDRWKEVSKVESELKEKIDEIIRQKAESSETELSDSEHGYVDALIWLKEGSIQLTNEGIGKEMVERIYADPDQSIEYYDGYDSALKLVLKTLIELKNSKF
Ga0187765_109200811	3300018060	Tropical Peatland	VSKVEIELKGKIEELIRLKAESSVTDELSDSEHGYVDALLWLKEGSIQLTHEGLGKEIVERTYADRDPSKEYCDGYDSALKLVLKM
Ga0187784_105595601	3300018062	Tropical Peatland	IRQKAESSETELSDSEHGYVDALIWFKEGSIPLTNEGIGKELVERTYADKDQSTEYYNGYDSAVKLVLKMLIELKK
Ga0187772_108058961	3300018085	Tropical Peatland	LSKVESELQEKIDELIRQRAESSEADELSESEHGYVDALIWLKEGSIQLTNHGIEKEMVERTYADPDQSVEYYCGYDSALKLVLKMLIELKNGQ
Ga0187772_108880851	3300018085	Tropical Peatland	VSKVENELKEKIDEIIRQKAESSETELSNSEHGYVDALIWLKEGSIQLTNEGIGKEMAERTYADKDQSTEYYDGYDSALKLVLKMLIELKK
Ga0187769_100179002	3300018086	Tropical Peatland	MSEVESRLKEKIEEIIRQKAESSETDELSDSEHGYVDALMWLKEGSIQLTNEGIGKERVERSYADPDQSTEYYEGYDSALKLVLKTLIELKNS
Ga0182022_11067881	3300019785	Fen	VSNVENELKETIEEIIRQKAESSVTDELSDSEHGYVDALIWLKEGSIQLTNEGIGKEIVEQTYADKDSSKEYCDGYDSALKLVLKKLIELKKKYILNESH
Ga0208821_10662071	3300025432	Peatland	NAEGXKEVSKVENGLKEKIEEIIRQKAESSETELSDSEHGYVDALIWLKEGSIQLTNEGIGKEIVERTYADKDPSKEYCDGYDSALQLVLKMLIELKK
Ga0208455_10914152	3300025453	Peatland	EEIIRQKAESSETELSDSEHGYVDALIWLKEGSIQLTNEGIEKEIVERTYADPDQSKEYYDGYDSALKLVLRTLIELKK
Ga0209386_10090752	3300025582	Arctic Peat Soil	VSKVENELKEKIDEIIRQKAESSMTDELSDLEHGYVDALIWLKEGSIQLTNEGIGKEILERTYADKDASKEYCDGYDSALKLVLKKLIELKK
Ga0209124_100500213	3300025852	Arctic Peat Soil	VSKVENELKEKIEEIIRQKAESSITDELSDSEHGYVDALIWLKEGSIQLTNEGIGKEIVERTYADKDSSKEYCAGYDAALKLVLKMLIELKK
Ga0209226_102909582	3300025865	Arctic Peat Soil	VSKVENELKEKIEEIIRQKAESSVTDELSDSEHGYVDALIWLKEGSIQLTDEGIGKEIVERTYADKDSSKEYCDGYDSALKLVLKMLIELKK
Ga0209540_101083001	3300025888	Arctic Peat Soil	RQKAESSVTDELSDSEHGYVDALIWLKEGSIQLTDEGIGKEIVERTYADKDSSKEYCDGYDSALKLVLKMLIELKK
Ga0209585_100237643	3300025891	Arctic Peat Soil	VNKVENELKEKIEEIIRQKAESSITDELSDSEHGYVDALIWLKEGSIQLTNEGIGKEIVERTYADKDSSKEYSDGYDSALKQVLKMLIELKK
Ga0210136_10635511	3300025967	Natural And Restored Wetlands	VSKVESELKEKIEEIIRQKAESSLTDELSDSEHGYIDALIWLKEGSIQLTNEGIGKEIVERAYADKDPNKEYCSGYDSALKLVLKMLMELKK
Ga0208980_104229381	3300027887	Wetland	VSKVESELKEKIEEIIRQKAESSTSDEPSDSEHGFIDALLWLKEGSIQLTNEGIGKEIVERTYADKDPSREYCDGYDSALKLVLKMLIELKK
Ga0209777_100231802	3300027896	Freshwater Lake Sediment	VSKVENELKEKIEEIIRQKAESSVTDEISDSEHGYVDALIWLKEGSIQLTDEGIGKEIVERIYADKDSSKEYCDGYDSALKLVLRMLIELKK
Ga0209668_104612532	3300027899	Freshwater Lake Sediment	VENELKEKINEIIRQKAESSITDELSDSEHGYVDALIWLKEGSIQLTNEGIGKEIMERTYADKDSSKEYCDGYDSALKLVLKMLIELKK
Ga0209253_101193144	3300027900	Freshwater Lake Sediment	VSKVENGLKEKIEEIIRQKAESSVSDELSDSEHGYVDALIWLKEGSIQLTDEGIGKEIVERTYADKDPSKEYCDGYDSALKLVLKMLIELKK
Ga0209415_102192623	3300027905	Peatlands Soil	VSRVETELKEKVEELIRRKAESSESDELSDSEHGYVDALIWLKEGSIQLTDEGIGKEIVERTYADPDQSTEYVDGYDSALKLVLKMLIELEK
Ga0209415_107949561	3300027905	Peatlands Soil	VSKVEAELKGKVEELIRLKAESSVTDELSDSEHGFVDALIWLKEGSIQLTDEGIGKEIVERTYADKDPSKEYCDGYDSALKLVLKALIELKK
Ga0311332_112316952	3300029984	Fen	VSKVENELKEKIEEIIRQKAESSTTDELSDSEHGYVDALIWLKEGSIQLTDEGIGKEIVERTYADKDSSKEYCDGYDSALKLVLKMLIELKK
Ga0311333_114681721	3300030114	Fen	VSKVENELKEKIEEIIRQKAESSTTDELSDSEHGFVDALIWLKDGFIKLTNEGIGNEIVERTYSDKDSSKEYCDGYDSALKLVLKMLIELKK
Ga0302323_1011204432	3300031232	Fen	MSNVENELKEKIEEIIRQKAESSTTDELSDSEHGYVDALIWLKEGSIQLSNEGIGKEIVERTYADKDSSKEYCDGYDSALKLVLKMLIELKK
Ga0265316_107406201	3300031344	Rhizosphere	VSKVENELKKKIEEIIRQKAESSITDELSDSEHGYVDALIWLKDGSIQLTNEGLGKEIVERTYADKDSSKEYCDGYDSALKLVLKMLIELKK
Ga0302321_1009796082	3300031726	Fen	VSKVENELKEKIEAIIRQKAESSTTDELSDSEHGYVDALIWLKEGSIQLTDEGIGKEIVERTYADKDSSKEYCDGYDSALKLVLKMLIELKK
Ga0214473_104011831	3300031949	Soil	VSRVENELKIKIEEIIRQKAESSVTDELSDSEHGYVDALIWLKEGSIQLTNEAIEKEIVERTYADKDSSEEYCDGYDSALKLVLKMLIELKK
Ga0335078_101414284	3300032805	Soil	LSKVETELKEKIEEIIRQKAESSETDELSDSEHGYVDALIWLKEGSIQLTNEGIEKEIVERTYADPDQSKEYYDGYNSALKLVLKMLIELKK
Ga0335081_100741638	3300032892	Soil	VSKAENELKEKIEEIIRQKAESSVTDELSDSEHGYVDALIWLKEGSIQLTNEGIGKEIVERTYADKDPSKEYCDGYDSALKLVLKMLIELKKQ
Ga0335081_104947432	3300032892	Soil	MGEKEVSKVENELKEKIEGVIRQKAESSESDELSNSEHGYVDALIWLKEGSIQLTNEGIEKEIVERTYADPDQSKEYYDGYNSALKLVLKMLIELKK
Ga0335071_100260656	3300032897	Soil	VSEAEIKIKEKIDEMIRIRAELSVTDELPDSDHGYVDALIWLKEGSIQLTNEGIKKEMGIRKYADPDQCQEYYDGYESALKAVQKVISDIKE
Ga0335071_116575831	3300032897	Soil	VSNVERELMEKIEELLRQKAESATDELSDSEHGFVDALIWFKEGSIQLTNEGIGKEIKDRTYADKGSSKEYCNGYDSALNLVLKMLTELRKV
Ga0335077_107054682	3300033158	Soil	VSEVENELREKINEIIRKKAESSETDELSDSEHGYVDALIWLKEGSIQLTNEGIGKEMVERIYADPDQSIEYYDGYESALKLVLKTLIELKNSKF
Ga0326728_100450437	3300033402	Peat Soil	VSKVETELKEKIDEIIRQKAESSEIDELSDSEHGYVDALIWLKEGSIQLTNEGIGKEIVERTYADPDQSIEYYDGYDSALKLVLKMLTELKK
Ga0326728_108789531	3300033402	Peat Soil	VSNVENELKEKIEEIIRQKAESSSDTDELSESEHGFVDALIWLKEGSIQLTEEGIGKEIAEQTYADKDHGKEYRDGYDSALKLVLKTLNELKK
Ga0326727_109691571	3300033405	Peat Soil	VSNVENKLKEKIDEIIRQKAESSSDTDELSESEHGFVDALIWLKEGSIQLTDEGIGKEIADQTYADKDHGKEYHDGYDSALKLVLKTLNELKK
Ga0326726_110051941	3300033433	Peat Soil	VSKVENELKEKIEEIIRQKAESSATDELSDSEHGYVDALIWLKEGSIQLTNEGIGKEIVERTYADKDASKEYCDGYDSALKLVLKILIELKK
Ga0316630_122949852	3300033487	Soil	MELVSEVSKVEDELKAKIEEIIRQKAESATAEEPSDSEHGFIDALIWLKEGSIQLTNEGIGKEITELRYADKDPSKEYCTGYDSALKLVLKMLNELKK
Ga0370479_0053896_694_972	3300034123	Untreated Peat Soil	VSKVESELKGKIEEIIMRKAESATAEEPSDSEHGFIDALIWFKEGSIQLTNEGIGREIVKRTYADKDPSKEYFDGYDSALKLVLKMLNELNK
Ga0370479_0248810_124_426	3300034123	Untreated Peat Soil	VSKVENELKEKIDEIIRLKAESSVTDELSDSEHGYVDALIWLKEGSIQLTNEGIGKEIVERTYADKDSSKEYCDGYDSALKLVLKILIELKKIARSNESL
Ga0370490_0171436_462_710	3300034128	Untreated Peat Soil	KIDEIIRLKAESSVTDELSDSEHGYVDALIWLKKGSIQLTNEGIEKEIVERTYADKDSSKEYCDGYDSALKLVLKILIELKK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F068525

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences