NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F068403

Metagenome / Metatranscriptome Family F068403

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F068403
Family Type Metagenome / Metatranscriptome
Number of Sequences 124
Average Sequence Length 42 residues
Representative Sequence MAKDLNATGRWLKRLTQGLAEPQDREELLGVLREAGERGLV
Number of Associated Samples 112
Number of Associated Scaffolds 124

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 94.35 %
% of genes near scaffold ends (potentially truncated) 96.77 %
% of genes from short scaffolds (< 2000 bps) 91.13 %
Associated GOLD sequencing projects 109
AlphaFold2 3D model prediction Yes
3D model pTM-score0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (99.194 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(24.194 % of family members)
Environment Ontology (ENVO) Unclassified
(20.968 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(51.613 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 47.83%    β-sheet: 0.00%    Coil/Unstructured: 52.17%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 124 Family Scaffolds
PF02130YbeY 69.35
PF02562PhoH 27.42
PF04055Radical_SAM 2.42

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 124 Family Scaffolds
COG0319ssRNA-specific RNase YbeY, 16S rRNA maturation enzymeTranslation, ribosomal structure and biogenesis [J] 69.35
COG1702Phosphate starvation-inducible protein PhoH, predicted ATPaseSignal transduction mechanisms [T] 27.42
COG1875Predicted ribonuclease YlaK, contains NYN-type RNase and PhoH-family ATPase domainsGeneral function prediction only [R] 27.42


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms99.19 %
UnclassifiedrootN/A0.81 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002245|JGIcombinedJ26739_100401104All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1250Open in IMG/M
3300002914|JGI25617J43924_10205300All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria656Open in IMG/M
3300002916|JGI25389J43894_1002477All Organisms → cellular organisms → Bacteria → Proteobacteria2763Open in IMG/M
3300003911|JGI25405J52794_10168764All Organisms → cellular organisms → Bacteria → Proteobacteria502Open in IMG/M
3300004114|Ga0062593_102391150All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria596Open in IMG/M
3300005179|Ga0066684_10400576All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae921Open in IMG/M
3300005332|Ga0066388_100698604All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1622Open in IMG/M
3300005439|Ga0070711_100613471All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria909Open in IMG/M
3300005444|Ga0070694_101053209All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria677Open in IMG/M
3300005451|Ga0066681_10381524All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae866Open in IMG/M
3300005533|Ga0070734_10363611All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria826Open in IMG/M
3300005542|Ga0070732_10448671All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria780Open in IMG/M
3300005554|Ga0066661_10667284All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria612Open in IMG/M
3300005587|Ga0066654_10461404All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria695Open in IMG/M
3300005764|Ga0066903_106154259All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria628Open in IMG/M
3300005843|Ga0068860_101502507All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales695Open in IMG/M
3300005949|Ga0066791_10083217All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria639Open in IMG/M
3300009011|Ga0105251_10458187All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria592Open in IMG/M
3300009093|Ga0105240_10569819All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1250Open in IMG/M
3300009177|Ga0105248_11312681All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria818Open in IMG/M
3300009553|Ga0105249_10635713All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1124Open in IMG/M
3300010043|Ga0126380_10259804All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1208Open in IMG/M
3300010046|Ga0126384_10353896All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1225Open in IMG/M
3300010362|Ga0126377_11315809All Organisms → cellular organisms → Bacteria → Proteobacteria795Open in IMG/M
3300010371|Ga0134125_10522591All Organisms → cellular organisms → Bacteria → Proteobacteria1314Open in IMG/M
3300010371|Ga0134125_11297444All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria794Open in IMG/M
3300010371|Ga0134125_12346272All Organisms → cellular organisms → Bacteria → Proteobacteria580Open in IMG/M
3300010376|Ga0126381_101249306Not Available1073Open in IMG/M
3300010376|Ga0126381_102253146All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria783Open in IMG/M
3300010376|Ga0126381_104716901All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria525Open in IMG/M
3300010399|Ga0134127_11594355All Organisms → cellular organisms → Bacteria → Proteobacteria727Open in IMG/M
3300010399|Ga0134127_11750675All Organisms → cellular organisms → Bacteria → Proteobacteria697Open in IMG/M
3300010867|Ga0126347_1064340All Organisms → cellular organisms → Bacteria → Proteobacteria583Open in IMG/M
3300013307|Ga0157372_12263209All Organisms → cellular organisms → Bacteria → Proteobacteria624Open in IMG/M
3300014325|Ga0163163_11170899All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria831Open in IMG/M
3300014658|Ga0181519_10667869All Organisms → cellular organisms → Bacteria → Proteobacteria641Open in IMG/M
3300014968|Ga0157379_11688604All Organisms → cellular organisms → Bacteria → Proteobacteria620Open in IMG/M
3300015052|Ga0137411_1369533All Organisms → cellular organisms → Bacteria → Proteobacteria2189Open in IMG/M
3300015054|Ga0137420_1112583All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales1174Open in IMG/M
3300016319|Ga0182033_10361201All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1217Open in IMG/M
3300016341|Ga0182035_10922560All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria771Open in IMG/M
3300016371|Ga0182034_11138402All Organisms → cellular organisms → Bacteria → Proteobacteria677Open in IMG/M
3300016404|Ga0182037_10161112All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1702Open in IMG/M
3300017959|Ga0187779_10130626All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1536Open in IMG/M
3300017959|Ga0187779_11135772All Organisms → cellular organisms → Bacteria → Proteobacteria547Open in IMG/M
3300017970|Ga0187783_11141296All Organisms → cellular organisms → Bacteria → Proteobacteria561Open in IMG/M
3300017974|Ga0187777_10252549All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans1197Open in IMG/M
3300017975|Ga0187782_10873671All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria697Open in IMG/M
3300018064|Ga0187773_10035465All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2224Open in IMG/M
3300018085|Ga0187772_10061617All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2334Open in IMG/M
3300018433|Ga0066667_11954354All Organisms → cellular organisms → Bacteria → Proteobacteria537Open in IMG/M
3300018482|Ga0066669_10576644All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria983Open in IMG/M
3300020579|Ga0210407_10371839All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales1118Open in IMG/M
3300021168|Ga0210406_10562952All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria894Open in IMG/M
3300021180|Ga0210396_10492910All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1073Open in IMG/M
3300021180|Ga0210396_11587942All Organisms → cellular organisms → Bacteria → Proteobacteria535Open in IMG/M
3300021401|Ga0210393_10823222All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria755Open in IMG/M
3300021405|Ga0210387_10854642All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria802Open in IMG/M
3300021407|Ga0210383_10798987All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria808Open in IMG/M
3300021420|Ga0210394_10067129All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae3109Open in IMG/M
3300021433|Ga0210391_10779183All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria748Open in IMG/M
3300021474|Ga0210390_11068863All Organisms → cellular organisms → Bacteria → Proteobacteria657Open in IMG/M
3300022724|Ga0242665_10112887All Organisms → cellular organisms → Bacteria → Proteobacteria820Open in IMG/M
3300025912|Ga0207707_10169427All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1908Open in IMG/M
3300025913|Ga0207695_10811455All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria816Open in IMG/M
3300025914|Ga0207671_10058227All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2864Open in IMG/M
3300025919|Ga0207657_10588512All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Ectothiorhodospiraceae869Open in IMG/M
3300025934|Ga0207686_11725701All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → Planctomycetaceae518Open in IMG/M
3300026088|Ga0207641_11944031All Organisms → cellular organisms → Bacteria → Proteobacteria590Open in IMG/M
3300026313|Ga0209761_1190667All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria916Open in IMG/M
3300026328|Ga0209802_1323211All Organisms → cellular organisms → Bacteria → Proteobacteria510Open in IMG/M
3300026557|Ga0179587_10776592All Organisms → cellular organisms → Bacteria → Proteobacteria631Open in IMG/M
3300027565|Ga0209219_1164762All Organisms → cellular organisms → Bacteria → Proteobacteria529Open in IMG/M
3300027576|Ga0209003_1112812All Organisms → cellular organisms → Bacteria → Proteobacteria516Open in IMG/M
3300027591|Ga0209733_1102883All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria719Open in IMG/M
3300027648|Ga0209420_1177750All Organisms → cellular organisms → Bacteria → Proteobacteria574Open in IMG/M
3300027915|Ga0209069_10954500All Organisms → cellular organisms → Bacteria → Proteobacteria523Open in IMG/M
3300028379|Ga0268266_10326532All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1437Open in IMG/M
3300028792|Ga0307504_10394025All Organisms → cellular organisms → Bacteria → Proteobacteria543Open in IMG/M
3300029910|Ga0311369_10016989All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria8772Open in IMG/M
3300029944|Ga0311352_10849223All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria711Open in IMG/M
3300029951|Ga0311371_10902604All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae1068Open in IMG/M
3300029951|Ga0311371_12332417All Organisms → cellular organisms → Bacteria → Proteobacteria552Open in IMG/M
3300030054|Ga0302182_10070974All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1555Open in IMG/M
3300030490|Ga0302184_10022177All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria3411Open in IMG/M
3300030521|Ga0307511_10310358All Organisms → cellular organisms → Bacteria → Proteobacteria705Open in IMG/M
3300031022|Ga0138301_1608631All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria854Open in IMG/M
3300031047|Ga0073995_12223303All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria851Open in IMG/M
3300031234|Ga0302325_10766803All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1371Open in IMG/M
3300031525|Ga0302326_10500270All Organisms → cellular organisms → Bacteria → Proteobacteria1842Open in IMG/M
3300031525|Ga0302326_11552486All Organisms → cellular organisms → Bacteria → Proteobacteria883Open in IMG/M
3300031549|Ga0318571_10414147All Organisms → cellular organisms → Bacteria → Proteobacteria528Open in IMG/M
3300031640|Ga0318555_10079264All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1708Open in IMG/M
3300031713|Ga0318496_10091386All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1625Open in IMG/M
3300031715|Ga0307476_10027987All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria3724Open in IMG/M
3300031719|Ga0306917_10864946All Organisms → cellular organisms → Bacteria → Proteobacteria708Open in IMG/M
3300031744|Ga0306918_11017592All Organisms → cellular organisms → Bacteria → Proteobacteria643Open in IMG/M
3300031747|Ga0318502_10260449All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1014Open in IMG/M
3300031753|Ga0307477_11062414All Organisms → cellular organisms → Bacteria → Proteobacteria529Open in IMG/M
3300031754|Ga0307475_10078956All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae2533Open in IMG/M
3300031754|Ga0307475_11528664All Organisms → cellular organisms → Bacteria → Proteobacteria511Open in IMG/M
3300031765|Ga0318554_10664966All Organisms → cellular organisms → Bacteria → Proteobacteria585Open in IMG/M
3300031782|Ga0318552_10594918All Organisms → cellular organisms → Bacteria → Proteobacteria564Open in IMG/M
3300031794|Ga0318503_10286272All Organisms → cellular organisms → Bacteria → Proteobacteria535Open in IMG/M
3300031795|Ga0318557_10091178All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Sinobacteraceae1339Open in IMG/M
3300031795|Ga0318557_10127301All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1142Open in IMG/M
3300031860|Ga0318495_10467300All Organisms → cellular organisms → Bacteria → Proteobacteria552Open in IMG/M
3300031890|Ga0306925_11295651All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria724Open in IMG/M
3300031896|Ga0318551_10545553All Organisms → cellular organisms → Bacteria → Proteobacteria667Open in IMG/M
3300031897|Ga0318520_10558267All Organisms → cellular organisms → Bacteria → Proteobacteria710Open in IMG/M
3300031912|Ga0306921_12141450All Organisms → cellular organisms → Bacteria → Proteobacteria591Open in IMG/M
3300031941|Ga0310912_10647173All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria821Open in IMG/M
3300031941|Ga0310912_11044842All Organisms → cellular organisms → Bacteria → Proteobacteria625Open in IMG/M
3300031946|Ga0310910_10624512All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria854Open in IMG/M
3300031949|Ga0214473_10925926All Organisms → cellular organisms → Bacteria927Open in IMG/M
3300032001|Ga0306922_10134560All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria2635Open in IMG/M
3300032010|Ga0318569_10065986All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1594Open in IMG/M
3300032054|Ga0318570_10066498All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria1526Open in IMG/M
3300032174|Ga0307470_11391324All Organisms → cellular organisms → Bacteria → Proteobacteria579Open in IMG/M
3300032515|Ga0348332_12724403All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria960Open in IMG/M
3300032805|Ga0335078_11640922All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria709Open in IMG/M
3300032898|Ga0335072_10630916All Organisms → cellular organisms → Bacteria → Proteobacteria1068Open in IMG/M
3300033158|Ga0335077_11200161All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria743Open in IMG/M
3300033513|Ga0316628_101811079All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria812Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil24.19%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil7.26%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa7.26%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland5.65%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil4.84%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil4.03%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil4.03%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil4.03%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil4.03%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil4.03%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil3.23%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil2.42%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.42%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.42%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.61%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.61%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.61%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.61%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog0.81%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.81%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Soil0.81%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.81%
Plant LitterEnvironmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter0.81%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere0.81%
EctomycorrhizaHost-Associated → Plants → Roots → Unclassified → Unclassified → Ectomycorrhiza0.81%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.81%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.81%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.81%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.81%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.81%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300002914Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cmEnvironmentalOpen in IMG/M
3300002916Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cmEnvironmentalOpen in IMG/M
3300003911Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1Host-AssociatedOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300005179Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005451Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130EnvironmentalOpen in IMG/M
3300005533Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1EnvironmentalOpen in IMG/M
3300005542Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1EnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300005949Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil leachate replicate DNA2013-051EnvironmentalOpen in IMG/M
3300009011Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaGHost-AssociatedOpen in IMG/M
3300009093Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010867Boreal forest soil eukaryotic communities from Alaska, USA - C3-5 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014658Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_10_metaGEnvironmentalOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015052Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300015054Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (PacBio error correction)EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300017959Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MGEnvironmentalOpen in IMG/M
3300017970Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MGEnvironmentalOpen in IMG/M
3300017974Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MGEnvironmentalOpen in IMG/M
3300017975Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018064Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MGEnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018433Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300021168Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021401Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021407Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-OEnvironmentalOpen in IMG/M
3300021420Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-MEnvironmentalOpen in IMG/M
3300021433Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-OEnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300022724Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025913Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026313Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026328Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027565Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027576Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027591Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027648Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_O1 (SPAdes)EnvironmentalOpen in IMG/M
3300027915Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)EnvironmentalOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028792Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 19_SEnvironmentalOpen in IMG/M
3300029910III_Palsa_E2 coassemblyEnvironmentalOpen in IMG/M
3300029944II_Palsa_E1 coassemblyEnvironmentalOpen in IMG/M
3300029951III_Palsa_N1 coassemblyEnvironmentalOpen in IMG/M
3300030054Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_1EnvironmentalOpen in IMG/M
3300030490Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_N3_3EnvironmentalOpen in IMG/M
3300030521Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EMHost-AssociatedOpen in IMG/M
3300031022Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_spring Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300031047Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1B (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031234Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_2EnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031549Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24EnvironmentalOpen in IMG/M
3300031640Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23EnvironmentalOpen in IMG/M
3300031713Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22EnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031719Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031747Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031765Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22EnvironmentalOpen in IMG/M
3300031782Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20EnvironmentalOpen in IMG/M
3300031794Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23EnvironmentalOpen in IMG/M
3300031795Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19EnvironmentalOpen in IMG/M
3300031860Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031896Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19EnvironmentalOpen in IMG/M
3300031897Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300031949Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197EnvironmentalOpen in IMG/M
3300032001Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)EnvironmentalOpen in IMG/M
3300032010Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22EnvironmentalOpen in IMG/M
3300032054Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032515FICUS49499 Metatranscriptome Czech Republic combined assembly (additional data)EnvironmentalOpen in IMG/M
3300032805Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2EnvironmentalOpen in IMG/M
3300032898Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300033513Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_CEnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGIcombinedJ26739_10040110433300002245Forest SoilMTKDLNTTGRWLKRLTQGLAPEPQDRKQLLTVLRDAGERGLVD
JGI25617J43924_1020530013300002914Grasslands SoilMTKDLNTTGRWLKRLTQGLAPEPQDRKQLLAVLREAGERGLVDSDALTMLEG
JGI25389J43894_100247743300002916Grasslands SoilMPKDLNSTGRWLMKRLTQGLAPELQDRKDLLAVLREAGERGLVDGDALTMLE
JGI25405J52794_1016876423300003911Tabebuia Heterophylla RhizosphereMSNKDLNATGRWLKKITQSLGEPQDRDDLVVMLRAANERG
Ga0062593_10239115013300004114SoilMSKDLNATGRWLRKITQSLAAEPQDRAELIEQLRDANQRGLVDGDALNMLE
Ga0066684_1040057633300005179SoilMPKDLNSTGRWLMKRLTQGLAPELQDRKDLLAVLREAGERGLVD
Ga0066388_10069860413300005332Tropical Forest SoilMAKDLNTTGRWLKRLTRAPEPQDRDELARCMREAAERGLIDTDALTML
Ga0070711_10061347133300005439Corn, Switchgrass And Miscanthus RhizosphereMTKDLNTTGRWLKRLTQGLAPEPQDRKQLLAVLREAGERGLVDSDALTML
Ga0070694_10105320913300005444Corn, Switchgrass And Miscanthus RhizosphereMAKDLNTTGRWLKRLTQGLASEPQDREELVALLREAGERGLVDSD
Ga0066681_1038152433300005451SoilMPKDLNSTGRWLMKRLTQGLAPELQDRKDLLAVLREAGERGLVDGD
Ga0070734_1036361133300005533Surface SoilMAKDLSSTGRWLKRITQSFAAEPQDRAELLAVLQEAGERGLVDTDA
Ga0070732_1044867113300005542Surface SoilMAKDLNTTGRWLRRLTQGLAAEPQDREALASVLHEAAERGVIDSDA
Ga0066661_1066728413300005554SoilMTKDLNTTGRWLKRLTQGLAPEPQDRKQLLAVLREAGER
Ga0066654_1046140423300005587SoilMPKDLNSTGRWLMKRLTQGLAPELQDRKDLLAVLREAGERGLV
Ga0066903_10615425913300005764Tropical Forest SoilMAKESPNSTGRWLKRLTQSFSQEPQDRQELLGILRVAGERGLL
Ga0068860_10150250723300005843Switchgrass RhizosphereMSKDLNTTGRWLKKITQSLGEPQDRADLVSILRAAGERGVIDDDA
Ga0066791_1008321713300005949SoilMSKDTSTTGRWLKRITQSLSGEPQDRAELIALLRETA
Ga0105251_1045818723300009011Switchgrass RhizosphereMMAKDLNATGRWLKRITQSFSGEPQDREELLAVMREAGERGL
Ga0105240_1056981913300009093Corn RhizosphereMMAKDLNATGRWLKRITQSFSGEPQDREELLAVLREA
Ga0105248_1131268113300009177Switchgrass RhizosphereMAKDLNATGRWLKRLAQGFVGEPQDRQELLAMLREA
Ga0105249_1063571323300009553Switchgrass RhizosphereMMAKDLNATGRWLKRITQSFSGEPQDREELLAVLRSR*
Ga0126380_1025980413300010043Tropical Forest SoilMGKDLNTTGRWLRRLTHGLAAEPQDRKALTEVLREAADRSVIDSDALTM
Ga0126384_1035389613300010046Tropical Forest SoilMGKDLNTTGRWLRRLTHGLAAEPQDRKALADLLREAA
Ga0126377_1131580913300010362Tropical Forest SoilMAKDKDLNTTGRWLKRLTQGLAEPQDRKELLVMLRESAERGLVDADALTMLE
Ga0134125_1052259113300010371Terrestrial SoilMAQNDGSATGRWLKRTLKSFSGEPQDREELMELLRDAHERGV
Ga0134125_1129744433300010371Terrestrial SoilMAKELNATGRWLKKIAQGFVGEPQNRKELVSVLREA
Ga0134125_1234627223300010371Terrestrial SoilMTQNDGSATGRWLKRTLKSFSGEPQDREELMELLRDAHERGV
Ga0126381_10124930613300010376Tropical Forest SoilMADLNATGRWLKRLTRGSEPQDRQQLLGVLREAGERG
Ga0126381_10225314613300010376Tropical Forest SoilMAMTKDLNATGRWLKRLTRGPAVEPQDRKELLGVLRETADRGLIDADALTM
Ga0126381_10471690113300010376Tropical Forest SoilMGKDLNTTGRWLRRLTHGLAAEPQDRKALSEVLREAADRSVIDSDALTMLEG
Ga0134127_1159435513300010399Terrestrial SoilMSKDLNATGRWLRKIGQTLGEPQDRDDLVAILRAAGERGVIDDD
Ga0134127_1175067533300010399Terrestrial SoilMAKESPNSTGRWLKRFTQSFSQEPQDREELLGILRVAGDRGLLDTD
Ga0126347_106434013300010867Boreal Forest SoilMMAKDLNATGRWLKRITQSFSGEPQDRAELLAVLREAG
Ga0157372_1226320913300013307Corn RhizosphereMAKDLNATGRWLKRIAQGFTGEPQDRKDLVATMREAAERGL
Ga0163163_1117089913300014325Switchgrass RhizosphereMAKDLNATGRWLKRLTQGFAAEPQDRQELLAVLREAGERGLVDTEA
Ga0181519_1066786913300014658BogMAKDLNTTGRWLKRLTQGLSAEPQDRAELLALLREA
Ga0157379_1168860413300014968Switchgrass RhizosphereMTKDLNATGRWLKRITQSLSGEPHDRGELLELLREA
Ga0137411_136953353300015052Vadose Zone SoilMSKDLNATGRWLRKITQSLGEPQDSDDLIVILRAA
Ga0137420_111258333300015054Vadose Zone SoilMTKDLNTTGRWLKRLTQGLAPEPQDRKQLLAVLREAGERGLVDSDALTMLE
Ga0182033_1036120133300016319SoilMGKDLNSTGRWLRRLTHGLAAEPQDRKALADLLREAAERSVIDSDALTML
Ga0182035_1092256033300016341SoilMAKDLNTTGRWLRRLKGLSAEPQDREALASVLREA
Ga0182034_1113840213300016371SoilMGKDLNTTGRWLRRLTHGLAAEPQDRKALAEVLREAADRSVID
Ga0182037_1016111243300016404SoilMGKDLNTTGRWLRRLTHGLATEPQDRKALAEVLRE
Ga0187779_1013062613300017959Tropical PeatlandMSKDLNATGRWLKRLTQGLASEPQDRQELLGVLRDAGER
Ga0187779_1113577213300017959Tropical PeatlandMTKDLNSTGRWLRRLKQGLASEPQDRAELLTVLRDAGE
Ga0187783_1114129613300017970Tropical PeatlandMAKDLNTTGRWLKRLTQSLAEPQDRKDLLAVLREASERGIVDSDALTMLE
Ga0187777_1025254933300017974Tropical PeatlandMAKDLNSTGRWLKRLTRAPEPQDREELARYMREASERGLIDAD
Ga0187782_1087367133300017975Tropical PeatlandMTKDLNSTGRWLKRLKQGLASEPQDREELLGVLRDAGERGLV
Ga0187773_1003546543300018064Tropical PeatlandMTKDTSSTGRWLKRLTQGREPQDRQELLTVLREAGE
Ga0187772_1006161743300018085Tropical PeatlandMTKDVNSTGRWLRRLTQGLANEPQDRQELLAVLRDAGERGL
Ga0066667_1195435423300018433Grasslands SoilMPKDLNSTGGWLMKRLGQGLAPELPDREHLLAVLREAGKRVV
Ga0066669_1057664433300018482Grasslands SoilMPKDLNSTGRWLMKRLAQGLAPELQDRKDLLAVLREAGERGLVDGD
Ga0210407_1037183933300020579SoilMAKDLNATGRWLKRLTQGLAEPQDREELLGVLREAGERGLV
Ga0210406_1056295233300021168SoilMAKDLNATGRWLKKIAQGFVGEPQDRNELLAVLREAGQ
Ga0210396_1049291033300021180SoilMAKDLNATGRWLKKIAQGFVGEPQDRTELVALLRQASQRGLVDADALS
Ga0210396_1158794213300021180SoilMAKDLNTTGRWLKRLTHGLAETQDRAHLLTMLREVSERGLID
Ga0210393_1082322233300021401SoilMTKDLNTTGRWLKRLTQGLSAEPQDRAELLAVLREASERGLIDAD
Ga0210387_1085464213300021405SoilMAKDLNATGRWLKKIAQGFVGEPQDRNELLAVLREAGQRG
Ga0210383_1079898713300021407SoilMAKDLNATGRWLKKIAQGFVGEPQDRTELVALLRQASQRGLVEADAL
Ga0210394_1006712913300021420SoilMTKDLNTTGRWLKRLTQGLAPEPQDRKQLLAVLREAGERGLVDSDAL
Ga0210391_1077918313300021433SoilMAKDLNATGRWLKKIAQGFVGEPQDRTELVALLRQA
Ga0210390_1106886313300021474SoilMAKDLNATGRWLKKIAQGFVGEPQDRTELVALLRQASQ
Ga0242665_1011288713300022724SoilMAKDLNATGRWLKKIAQGFVGEPQDRNELLAVLREA
Ga0207707_1016942743300025912Corn RhizosphereMAKDPNATGRWLKRLTRSFSQEPQDREKLLTVLRV
Ga0207695_1081145513300025913Corn RhizosphereMPKDINTTGKWLKRLTQGFAAEPQDRQELLEILREARTRG
Ga0207671_1005822713300025914Corn RhizosphereMAKDLNATGRWLKRLAQGFVGEPQDRQELLAMLREAAERGLVE
Ga0207657_1058851213300025919Corn RhizosphereMSKESPNSTGRWLKRLTQSFSQEPQDREELLGILR
Ga0207686_1172570113300025934Miscanthus RhizosphereMSKDLNATGRWLRKIGQTLGEPQDRDDLVAILRAAGQLEGALS
Ga0207641_1194403123300026088Switchgrass RhizosphereMSKDLNATGRWLRKIGQTLGEPQDRDDLVAILRAAGERGVIDDDACT
Ga0209761_119066733300026313Grasslands SoilMTKDLNSTGRWLKRLTQGFAAEPQDRQDLLALLREAGERGL
Ga0209802_132321113300026328SoilMTKDLNSTGRWLKRLTQGFAAEPQDRQDLLALLREA
Ga0179587_1077659213300026557Vadose Zone SoilMTKDLNTTGRWLKRLTQGLAPEPQDRKQLLAVLREA
Ga0209219_116476213300027565Forest SoilMTKDLNTTGRWLKRLTQGLAPEPQDRKQLLAVLREAGERGLVDSD
Ga0209003_111281213300027576Forest SoilMTKDLNSTGRWLRRIKQGLASEPQDREELLTVLHDAGERGLVD
Ga0209733_110288333300027591Forest SoilMTKDLNTTGRWLKRLTQGLAPEPQDRKQLLTVLRE
Ga0209420_117775013300027648Forest SoilMAKDLNTTGRWLKRLTQGLAIEPQDREQLLGVLREAG
Ga0209069_1095450023300027915WatershedsMTKDLNTTGRWLKRLTQGLAPEPQDRKQLLTVLRDAGERGLVDGDALTM
Ga0268266_1032653233300028379Switchgrass RhizosphereMAKDLNATGRWLKRITQSFSGEPQDREELLAVLRE
Ga0307504_1039402513300028792SoilMTKDLNTTGRWLKRLTQGLAPEPQDRNQLLAVLREAG
Ga0311369_1001698993300029910PalsaMSKDTSTTGRWLKRLTQSLSGEPQDRAELLTLLRETAERGLVDA
Ga0311352_1084922333300029944PalsaMSKDTSTTGRWLKRLTQSLSGEPQDRAELLTLLRETAERGLVDADA
Ga0311371_1090260433300029951PalsaMTKDKDISSTGRWLKRLTLGQAEPQDRKELLAILRDSSERGLIDADALTMLE
Ga0311371_1233241723300029951PalsaMSKDTSTTGRWLKRLTQSLTSEPQDRGELLTLLRETA
Ga0302182_1007097413300030054PalsaMSKDTSTTGRWLKKLTQSLSGEPQDRAELLTLLRETAERG
Ga0302184_1002217753300030490PalsaMSKDTSTTGRWLKRLTQSLTSEPQDRGELLTLLRETAARGLVDADALEM
Ga0307511_1031035833300030521EctomycorrhizaMAKDLNATGRWLKKIAQGFVGEPQDRNELLAVLREAGQRGLIESDA
Ga0138301_160863123300031022SoilMAKDLNATGRWLKKIAQGFVGEPQDRNELLAVLREAGQRGRSSRTR
Ga0073995_1222330333300031047SoilMAKDLNATGRWLKRITQSFSGEPQDREELLGVLREAGERGLVD
Ga0302325_1076680313300031234PalsaMAKDLNTTGRWLRRLRQGPEPQDREELLVVLRDAAERGL
Ga0302326_1050027013300031525PalsaMSKDTSTTGRWLKRLTQSLTSEPQDRGELLTLLRETAARGLVDADAL
Ga0302326_1155248613300031525PalsaMSKDTSTTGRWLKRLTQSLSGEPQDRAELLTLLRETAQ
Ga0318571_1041414713300031549SoilMGKDLNTTGRWLRRLTHGLASEPQDRKALAEVLHEAAERGVIDS
Ga0318555_1007926413300031640SoilMGKDLNTTGRWLRRLTHGLAAEPQDRKALAEVLREAADRSVIDSDALTML
Ga0318496_1009138633300031713SoilMAKDLNTTGRWLRRLKGLAAEPQDREALASVLREAAEREI
Ga0307476_1002798753300031715Hardwood Forest SoilMAKDLNATGRWLKKIAQGFVGEPQDRTELVALLRQAS
Ga0306917_1086494613300031719SoilMGKDLNTTGRWLRRLTHGLAAEPQDRKALAEVLREAADRSVIDSDAL
Ga0306918_1101759213300031744SoilMGKDLNTTGRWLRRLTHGLAAEPQDRKALAEVLREAADRSVIDSDA
Ga0318502_1026044913300031747SoilMGKDLNTTGRWLRRLTHGLATEPQDRKALAEVLREAADRSV
Ga0307477_1106241423300031753Hardwood Forest SoilMAKDLNTTGRWLRRLTQGLAAEPQDREALASVLHEAAERGVIDSDALT
Ga0307475_1007895643300031754Hardwood Forest SoilMGKDLNTTGRWLRRLTHGLAVEPQDRKALAAVLHEAAERGVID
Ga0307475_1152866413300031754Hardwood Forest SoilMSKDPNTTGRWLRRLKQGLAAEPQDREELRAVLRDAGDRGLVDGD
Ga0318554_1066496613300031765SoilMGKDLNTTGRWLRRLTQGLAAEPQDRNALAAVLREA
Ga0318552_1059491813300031782SoilMGKDLNTTGRWLRRLTHGLATEPQDRKALAEVLREAADRSVI
Ga0318503_1028627223300031794SoilMGKDLNSTGRWLRRLTQGLAAEPQDRAALATGLREAA
Ga0318557_1009117813300031795SoilMRKDLNTTGRWLRRLTHGLATEPQDRKALAEVLREAADRSVID
Ga0318557_1012730133300031795SoilMGKDLNTTGRWLRRLTHGLATEPQDRKALAEVLREAADRSVID
Ga0318495_1046730013300031860SoilMAKDLNTTGRWLRRLKGLAAEPQDREALASVLREAAERDIIDSDALTM
Ga0306925_1129565133300031890SoilMGKDLNTTGRWLRRLTHGLASEPQDRKALAEVLHEAAERG
Ga0318551_1054555323300031896SoilMGKDLKSTGRWLRRLTHGLAAEPQDRAALAAGLREAAERGVIDTDALT
Ga0318520_1055826713300031897SoilMGKDLNSTGRWLRRLTHGLAAEPQDRAALAAGLREAAERGVIDTDALTM
Ga0306921_1214145013300031912SoilMGKDLNTTGRWLRRLTQGLAAEPQDRKALAEVLREAADRSV
Ga0310912_1064717333300031941SoilMAKDLNTTGRWLRRLKGLAAEPQDREALASVLREAAE
Ga0310912_1104484223300031941SoilMGKDLNTTGRWLRRLTHGLATEPQDRKALAEVLREAADR
Ga0310910_1062451233300031946SoilMGKDLNTTGRWLRRLTHGLAAGPQDRKALAEVLREAADRSVIDSDALTML
Ga0214473_1092592633300031949SoilMSKDLNATGRWLKKITQSLGEPQDRSDLVAILRAAGERGVIDDDAC
Ga0306922_1013456013300032001SoilMAKDLNSTGRWLRRLTHGLAAEPQDRKALADVLREAAERSVIDSDA
Ga0318569_1006598633300032010SoilMGKDLNSTGRWLRRLTHGLAAEPQDRAALAAGLREAAERGVID
Ga0318570_1006649813300032054SoilMGKDLNSTGRWLRRLTQGLAAEPQDRAALATGLREAAERGVI
Ga0307470_1139132423300032174Hardwood Forest SoilMAKDLNATGRWLKRLTQGLAEPQDREELLGVLREAAERGLVDADAL
Ga0348332_1272440313300032515Plant LitterMAKELNATGRWLKKIAQGFVGEPQDRKELVGVLRDAAANTEKKWGK
Ga0335078_1164092233300032805SoilMTKDLNATGRWLKRLTQGLAAEPQDRAELLTLLRDASERGL
Ga0335072_1063091633300032898SoilMSKDTSSTGRWLKRLTQGLAAEPQDRAELLAVLRDAGERGL
Ga0335077_1120016133300033158SoilMAKDLNATGRWLKRITQREPQDRAELVTVLREAAERGLLD
Ga0316628_10181107913300033513SoilMAKDLNATGRWLKRIAQGFAAEPQDRQELLGVLREA


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.