Metagenome Family F068308

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F068308
Family Type	Metagenome
Number of Sequences	124
Average Sequence Length	51 residues
Representative Sequence	MVPIDFKAAINQDIAEIDLALSVLNSLRDVNLARLALIHEAEKRSAEDKQSK
Number of Associated Samples	30
Number of Associated Scaffolds	122

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	88.71 %
% of genes near scaffold ends (potentially truncated)	8.87 %
% of genes from short scaffolds (< 2000 bps)	68.55 %
Associated GOLD sequencing projects	26
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.61

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (61.290 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen (36.290 % of family members)
Environment Ontology (ENVO)	Unclassified (37.903 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (53.226 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.50% β-sheet: 0.00% Coil/Unstructured: 42.50%
Feature Viewer

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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.61
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.61
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 122 Family Scaffolds
PF08401	ArdcN	15.57
PF00589	Phage_integrase	8.20
PF04434	SWIM	5.74
PF03692	CxxCxxCC	2.46
PF13476	AAA_23	1.64
PF13495	Phage_int_SAM_4	1.64
PF04208	MtrA	0.82
PF02899	Phage_int_SAM_1	0.82
PF08269	dCache_2	0.82
PF01255	Prenyltransf	0.82
PF01610	DDE_Tnp_ISL3	0.82
PF04104	DNA_primase_lrg	0.82
PF01381	HTH_3	0.82
PF08706	D5_N	0.82
PF01850	PIN	0.82
PF08004	DUF1699	0.82
PF01702	TGT	0.82
PF14947	HTH_45	0.82
PF02423	OCD_Mu_crystall	0.82
PF00583	Acetyltransf_1	0.82
PF00704	Glyco_hydro_18	0.82

COG ID	Name	Functional Category	% Frequency in 122 Family Scaffolds
COG4227	Antirestriction protein ArdC	Replication, recombination and repair [L]	15.57
COG4279	Uncharacterized protein, contains SWIM-type Zn finger domain	Function unknown [S]	5.74
COG4715	Uncharacterized protein, contains SWIM-type Zn finger domain	Function unknown [S]	5.74
COG5431	Predicted nucleic acid-binding protein, contains SWIM-type Zn-finger domain	General function prediction only [R]	5.74
COG0020	Undecaprenyl pyrophosphate synthase	Lipid transport and metabolism [I]	0.82
COG0343	Queuine/archaeosine tRNA-ribosyltransferase	Translation, ribosomal structure and biogenesis [J]	0.82
COG1549	Archaeosine tRNA-ribosyltransferase, contains uracil-DNA-glycosylase and PUA domains	Translation, ribosomal structure and biogenesis [J]	0.82
COG2219	Eukaryotic-type DNA primase, large subunit	Replication, recombination and repair [L]	0.82
COG2423	Ornithine cyclodeaminase/archaeal alanine dehydrogenase, mu-crystallin family	Amino acid transport and metabolism [E]	0.82
COG3464	Transposase	Mobilome: prophages, transposons [X]	0.82
COG4063	Tetrahydromethanopterin S-methyltransferase, subunit A	Coenzyme transport and metabolism [H]	0.82
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	0.82
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	0.82

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.29 %
All Organisms	root	All Organisms	38.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.29 %
cellular organisms	root	All Organisms → cellular organisms	38.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.29 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	33.06 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	5.65 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.29 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	18.55 %
environmental samples	no rank	All Organisms → cellular organisms → Archaea → environmental samples	12.10 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.29 %
Stenosarchaea group	clade	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group	12.10 %
uncultured archaeon	species	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	12.10 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	1.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.29 %
Methanomicrobia	class	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	12.10 %
uncultured archaeon	species	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	12.10 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.29 %
uncultured archaeon	species	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	12.10 %
Methanotrichales	order	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales	11.29 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.29 %
uncultured archaeon	species	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	12.10 %
Methanotrichaceae	family	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae	11.29 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.29 %
uncultured archaeon	species	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	12.10 %
Methanothrix	genus	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix	11.29 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.29 %
uncultured archaeon	species	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	12.10 %
unclassified Methanothrix	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix	2.42 %
Methanothrix soehngenii	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → Methanothrix soehngenii	1.61 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.61 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	61.29 %
uncultured archaeon	species	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	12.10 %
Methanothrix sp.	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanothrix sp.	1.61 %
Methanothrix soehngenii	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → Methanothrix soehngenii	1.61 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	1.61 %
Methanosaeta sp. PtaU1.Bin060	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. PtaU1.Bin060	0.81 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003218\|JGI26339J46600_10035908	Not Available	1379	Open in IMG/M
3300003218\|JGI26339J46600_10106335	Not Available	683	Open in IMG/M
3300003852\|Ga0031655_10001124	All Organisms → cellular organisms → Archaea	16123	Open in IMG/M
3300003852\|Ga0031655_10010612	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → Methanothrix soehngenii	4715	Open in IMG/M
3300003852\|Ga0031655_10012427	Not Available	4304	Open in IMG/M
3300003852\|Ga0031655_10012436	All Organisms → cellular organisms → Archaea → Euryarchaeota	4302	Open in IMG/M
3300003852\|Ga0031655_10107510	Not Available	1118	Open in IMG/M
3300003852\|Ga0031655_10145741	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanothrix sp.	923	Open in IMG/M
3300003852\|Ga0031655_10278094	All Organisms → cellular organisms → Archaea → Euryarchaeota	627	Open in IMG/M
3300004152\|Ga0062386_100022239	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix	4646	Open in IMG/M
3300014490\|Ga0182010_10012811	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	3783	Open in IMG/M
3300014490\|Ga0182010_10019343	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3095	Open in IMG/M
3300014490\|Ga0182010_10019343	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	3095	Open in IMG/M
3300014490\|Ga0182010_10020801	Not Available	2993	Open in IMG/M
3300014490\|Ga0182010_10022578	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → Methanothrix soehngenii	2876	Open in IMG/M
3300014490\|Ga0182010_10118949	Not Available	1339	Open in IMG/M
3300014490\|Ga0182010_10246675	All Organisms → cellular organisms → Bacteria	947	Open in IMG/M
3300014490\|Ga0182010_10256147	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	931	Open in IMG/M
3300014490\|Ga0182010_10274851	Not Available	900	Open in IMG/M
3300014490\|Ga0182010_10388165	Not Available	760	Open in IMG/M
3300014490\|Ga0182010_10549938	Not Available	641	Open in IMG/M
3300014490\|Ga0182010_10571754	All Organisms → cellular organisms → Archaea → Euryarchaeota	629	Open in IMG/M
3300014494\|Ga0182017_10014699	Not Available	5478	Open in IMG/M
3300014494\|Ga0182017_10021133	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	4494	Open in IMG/M
3300014494\|Ga0182017_10021501	All Organisms → cellular organisms → Archaea	4455	Open in IMG/M
3300014494\|Ga0182017_10025981	Not Available	4011	Open in IMG/M
3300014494\|Ga0182017_10044365	Not Available	2981	Open in IMG/M
3300014494\|Ga0182017_10142932	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	1550	Open in IMG/M
3300014494\|Ga0182017_10281449	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix	1045	Open in IMG/M
3300014494\|Ga0182017_10458851	Not Available	784	Open in IMG/M
3300014494\|Ga0182017_10672839	Not Available	628	Open in IMG/M
3300014496\|Ga0182011_10036888	Not Available	3499	Open in IMG/M
3300014496\|Ga0182011_10234485	Not Available	1237	Open in IMG/M
3300014496\|Ga0182011_10289003	Not Available	1091	Open in IMG/M
3300014496\|Ga0182011_10295095	Not Available	1077	Open in IMG/M
3300014496\|Ga0182011_10422124	Not Available	867	Open in IMG/M
3300014496\|Ga0182011_10815098	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix	584	Open in IMG/M
3300014502\|Ga0182021_10027490	Not Available	6715	Open in IMG/M
3300014502\|Ga0182021_10050906	Not Available	4833	Open in IMG/M
3300014502\|Ga0182021_10374381	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	1686	Open in IMG/M
3300014502\|Ga0182021_10599491	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	1318	Open in IMG/M
3300014502\|Ga0182021_10754944	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	1167	Open in IMG/M
3300014502\|Ga0182021_10982999	Not Available	1015	Open in IMG/M
3300014502\|Ga0182021_11417726	Not Available	837	Open in IMG/M
3300014502\|Ga0182021_11891116	Not Available	718	Open in IMG/M
3300014502\|Ga0182021_12620928	Not Available	606	Open in IMG/M
3300014502\|Ga0182021_12739154	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	592	Open in IMG/M
3300014502\|Ga0182021_12791110	Not Available	587	Open in IMG/M
3300014502\|Ga0182021_12924949	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix	573	Open in IMG/M
3300014502\|Ga0182021_13597284	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	515	Open in IMG/M
3300014839\|Ga0182027_10529651	Not Available	1281	Open in IMG/M
3300014839\|Ga0182027_10731200	All Organisms → cellular organisms → Archaea → Euryarchaeota	1044	Open in IMG/M
3300014839\|Ga0182027_10861234	Not Available	942	Open in IMG/M
3300014839\|Ga0182027_11695848	Not Available	614	Open in IMG/M
3300017941\|Ga0187850_10162219	Not Available	1042	Open in IMG/M
3300017961\|Ga0187778_10976765	Not Available	585	Open in IMG/M
3300017974\|Ga0187777_10627903	Not Available	758	Open in IMG/M
3300018005\|Ga0187878_1045707	Not Available	2009	Open in IMG/M
3300018015\|Ga0187866_1201018	Not Available	739	Open in IMG/M
3300018018\|Ga0187886_1026596	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia	3022	Open in IMG/M
3300018018\|Ga0187886_1028775	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix	2851	Open in IMG/M
3300018018\|Ga0187886_1071465	Not Available	1520	Open in IMG/M
3300018018\|Ga0187886_1082670	All Organisms → cellular organisms → Bacteria	1378	Open in IMG/M
3300018018\|Ga0187886_1154312	Not Available	911	Open in IMG/M
3300018018\|Ga0187886_1168512	Not Available	860	Open in IMG/M
3300018018\|Ga0187886_1269083	Not Available	640	Open in IMG/M
3300018018\|Ga0187886_1278978	Not Available	626	Open in IMG/M
3300018018\|Ga0187886_1369588	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix	528	Open in IMG/M
3300018058\|Ga0187766_11261751	Not Available	537	Open in IMG/M
3300019785\|Ga0182022_1163397	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	3556	Open in IMG/M
3300022830\|Ga0224515_1002451	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	3043	Open in IMG/M
3300022830\|Ga0224515_1003403	All Organisms → cellular organisms → Archaea → Euryarchaeota	2583	Open in IMG/M
3300022830\|Ga0224515_1007339	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	1740	Open in IMG/M
3300022830\|Ga0224515_1020536	Not Available	974	Open in IMG/M
3300022830\|Ga0224515_1040845	Not Available	645	Open in IMG/M
3300023075\|Ga0224520_1135232	Not Available	541	Open in IMG/M
3300023232\|Ga0224516_1005775	Not Available	1851	Open in IMG/M
3300023232\|Ga0224516_1011288	Not Available	1264	Open in IMG/M
3300024233\|Ga0224521_1099835	All Organisms → cellular organisms → Archaea → Euryarchaeota	626	Open in IMG/M
3300024238\|Ga0224523_1124902	Not Available	583	Open in IMG/M
3300024240\|Ga0224522_1123443	Not Available	597	Open in IMG/M
3300027825\|Ga0209039_10008083	Not Available	6603	Open in IMG/M
3300027825\|Ga0209039_10026881	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix	2828	Open in IMG/M
3300027825\|Ga0209039_10037831	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	2268	Open in IMG/M
3300027825\|Ga0209039_10059310	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix	1719	Open in IMG/M
3300027896\|Ga0209777_10006883	Not Available	12736	Open in IMG/M
3300027896\|Ga0209777_10013445	Not Available	8430	Open in IMG/M
3300027896\|Ga0209777_10014225	Not Available	8145	Open in IMG/M
3300027896\|Ga0209777_10018548	Not Available	6959	Open in IMG/M
3300027896\|Ga0209777_10018968	Not Available	6862	Open in IMG/M
3300027896\|Ga0209777_10038315	All Organisms → cellular organisms → Archaea → Euryarchaeota	4458	Open in IMG/M
3300027896\|Ga0209777_10050029	Not Available	3789	Open in IMG/M
3300027896\|Ga0209777_10051727	All Organisms → cellular organisms → Bacteria	3712	Open in IMG/M
3300027896\|Ga0209777_10096229	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanosaeta sp. PtaU1.Bin060	2534	Open in IMG/M
3300027896\|Ga0209777_10112996	Not Available	2294	Open in IMG/M
3300027896\|Ga0209777_10114942	All Organisms → cellular organisms → Archaea	2271	Open in IMG/M
3300027896\|Ga0209777_10169689	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix	1782	Open in IMG/M
3300027896\|Ga0209777_10169736	Not Available	1781	Open in IMG/M
3300027896\|Ga0209777_10200516	Not Available	1605	Open in IMG/M
3300027896\|Ga0209777_10220266	Not Available	1511	Open in IMG/M
3300027896\|Ga0209777_10280482	Not Available	1297	Open in IMG/M
3300027896\|Ga0209777_10303222	All Organisms → cellular organisms → Bacteria	1234	Open in IMG/M
3300027896\|Ga0209777_10323445	Not Available	1184	Open in IMG/M
3300027896\|Ga0209777_10361948	All Organisms → cellular organisms → Archaea → Euryarchaeota → Stenosarchaea group → Methanomicrobia → Methanotrichales → Methanotrichaceae → Methanothrix → unclassified Methanothrix → Methanothrix sp.	1102	Open in IMG/M
3300027896\|Ga0209777_10370952	Not Available	1085	Open in IMG/M
3300027896\|Ga0209777_10380185	Not Available	1068	Open in IMG/M
3300027896\|Ga0209777_10508235	Not Available	887	Open in IMG/M
3300027896\|Ga0209777_10563956	Not Available	830	Open in IMG/M
3300027896\|Ga0209777_10599580	Not Available	797	Open in IMG/M
3300027896\|Ga0209777_10680196	Not Available	735	Open in IMG/M
3300027896\|Ga0209777_10709999	Not Available	714	Open in IMG/M
3300027896\|Ga0209777_10831415	All Organisms → cellular organisms → Archaea → Euryarchaeota	645	Open in IMG/M
3300027896\|Ga0209777_10897493	Not Available	614	Open in IMG/M
3300027896\|Ga0209777_11036835	Not Available	558	Open in IMG/M
3300027896\|Ga0209777_11055050	Not Available	552	Open in IMG/M
3300027902\|Ga0209048_10090096	Not Available	2382	Open in IMG/M
3300031232\|Ga0302323_101376973	Not Available	792	Open in IMG/M
3300031902\|Ga0302322_101373305	Not Available	860	Open in IMG/M
3300033433\|Ga0326726_10290476	Not Available	1532	Open in IMG/M
3300033433\|Ga0326726_10503618	Not Available	1159	Open in IMG/M
3300033433\|Ga0326726_10503618	Not Available	1159	Open in IMG/M
3300033433\|Ga0326726_11525560	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300033798\|Ga0334821_060111	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	754	Open in IMG/M
3300033819\|Ga0334816_103295	All Organisms → cellular organisms → Archaea → environmental samples → uncultured archaeon	523	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.03%
Aquatic	Environmental → Aquatic	45.97%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	45.97%
Soil	Environmental → Terrestrial → Soil	38.71%
Peat	Environmental → Terrestrial → Peat	15.32%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	38.71%
Lentic	Environmental → Aquatic → Freshwater → Lentic	30.65%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	15.32%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	15.32%

Habitat	Taxonomy	Distribution
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	36.29%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	30.65%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	15.32%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	15.32%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.42%

Habitat	Taxonomy	Distribution
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	36.29%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	30.65%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	10.48%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	9.68%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.65%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	3.23%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.42%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.61%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003218	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1	Environmental	Open in IMG/M
3300003852	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014496	Permafrost microbial communities from Stordalen Mire, Sweden - 711E1D metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018015	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_150	Environmental	Open in IMG/M
3300018018	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300019785	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (PacBio error correction)	Environmental	Open in IMG/M
3300022830	Peat soil microbial communities from Stordalen Mire, Sweden - IR.F.S.T-25	Environmental	Open in IMG/M
3300023075	Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T-25	Environmental	Open in IMG/M
3300023232	Peat soil microbial communities from Stordalen Mire, Sweden - IR.F.S.T0	Environmental	Open in IMG/M
3300024233	Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T0	Environmental	Open in IMG/M
3300024238	Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T50	Environmental	Open in IMG/M
3300024240	Peat soil microbial communities from Stordalen Mire, Sweden - C.F.S.T25	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027896	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies -HBP12 HB (SPAdes)	Environmental	Open in IMG/M
3300027902	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR (SPAdes)	Environmental	Open in IMG/M
3300031232	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_3	Environmental	Open in IMG/M
3300031902	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_2	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300033798	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-3-S	Environmental	Open in IMG/M
3300033819	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-2-M	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26339J46600_100359083	3300003218	Bog Forest Soil	MASYPFDVKAAITEDIAEIDLALSVLNSLRDINLARLALLHEAEKRA*
JGI26339J46600_101063352	3300003218	Bog Forest Soil	MASSSHPVIDFKAAITEDVAEIDLALSVLNGLRNVNLTRLEVLQESERREA*
Ga0031655_100011249	3300003852	Freshwater Lake Sediment	VVLIDFKKAISEDIAEIDLVLSVLNSLRYTNLARLALLREAEKRSAGDLGTQIKEA*
Ga0031655_100106127	3300003852	Freshwater Lake Sediment	MIPVDFKVAINQDIKEIDLALSVLNSLRDVNLARLALLHEAEMRSAEDSVIPNKKA*
Ga0031655_100124274	3300003852	Freshwater Lake Sediment	MTPVDFKAAITEDVAEIDLVLSVLNGLRNVNLARLALLKEAEARSAEDSGTHSRGV*
Ga0031655_100124363	3300003852	Freshwater Lake Sediment	MIPVDFKDAINQDINEIDLALSVLNSLRDVKVARLALLHEAEKRS*
Ga0031655_101075101	3300003852	Freshwater Lake Sediment	MGLIDFKAAITKDLAEIDLALSVLNGLREVNLARLALLQEAEKRSASESGTPSKEA*
Ga0031655_101457412	3300003852	Freshwater Lake Sediment	MAPVDFKAAITQDITEIELALSVLNGLRNVNLARLALLHESEKRSTKNSVSQNKEV*
Ga0031655_102780941	3300003852	Freshwater Lake Sediment	MVPIDFKAAINQDIAEIDLALSVLNSLRDVNLARLALIHEAEKRSAEDKQSK*
Ga0062386_1000222392	3300004152	Bog Forest Soil	MSSSGRPIIDFKAAITEDVAEIDLALSVLNGLRNVNMARLAVLQEAESREA*
Ga0182010_100128111	3300014490	Fen	MAPYNFKESIAEDIKEIDLALSVLNGLRDVNVARLALLKEAAERGI*
Ga0182010_100193434	3300014490	Fen	MPLIDFKAAIAEDVKEIDLALSVLNGLRDVNMARLALIEEAEKRK*
Ga0182010_100193437	3300014490	Fen	MPIDCKAAIAEDVKEIDLALSVLNGLRDVNMARLALIEEAEKRSKQT*
Ga0182010_100208012	3300014490	Fen	MVPIDFKAAITQDIAEIDLALSVLNSLRDVNLARLALLKEAEARSASQSGTPNKEA*
Ga0182010_100225781	3300014490	Fen	MMMPVDFKAAITEDVAEIELVLSVLNGLRNVKLARLALLKEAEARNAGDKEG*
Ga0182010_101189491	3300014490	Fen	MPIDYKAAIAEDVKEIDLALSVLNGLRDVSMARLALIEEAEKRSKQT*
Ga0182010_102466752	3300014490	Fen	MVPIDFKAAITQDIAEIDLALSILNGLRNVNLARLALLKEAETRSAESKEV*
Ga0182010_102561472	3300014490	Fen	MIPVDFKDAINQDIKEIDLALSVLNGLRDVNLARLALIHEAEKRSAEDKQSK*
Ga0182010_102748513	3300014490	Fen	MASIDFKTAIIQDIAEIDIALSVLNGLRDTNLARLALLHEAEKRA
Ga0182010_103881653	3300014490	Fen	MVPVDFKEAITQDIKEIDLALSVLNSLRDVNMARLALLHEAEKRSAEDSVTQSK*
Ga0182010_105499384	3300014490	Fen	VVPVDFKAAITEDIAEIDLALSVLNSLRDVNLARLELLKEAEARSSESKEA*
Ga0182010_105717541	3300014490	Fen	MIPIDFKAAINQDIKEIDLALSVLNSLRDVNMARLALLHEAEKRNAEDKQSK*
Ga0182017_100146998	3300014494	Fen	MASIDFKTAIIQDIAEIDIALSVLNGLRDTNLARLALLHEAEKRAIESDTPSQEA*
Ga0182017_100211335	3300014494	Fen	MAPYNFKESIAEDIKEIEVALSVLNGLRDVNTARLALLKEAEERGI*
Ga0182017_100215016	3300014494	Fen	MMPVDFKAAITEDIKEIELALSVLNGLRDVNAARLALLEEAETRNAGGKES*
Ga0182017_100259815	3300014494	Fen	MMMPVDFKAAITEDVAEIELVLSVLNGLRDVKLARLALLKEAEARNAGDKDG*
Ga0182017_100443653	3300014494	Fen	MVPIDFKKTISEDIAEIDLALSVLSGLRNVNLARLALLQEAEARSASESSTSNKEA*
Ga0182017_101429322	3300014494	Fen	MPIDYKAAIAEDVKEIDLALSVLNGLRDVNMARLALIEEAEKRSKQT*
Ga0182017_102814492	3300014494	Fen	MVPIDFKAAITEDIAEIDLALSVLNGLRNVNMARLEVLKEAEKRRTKDSVTQSKEA*
Ga0182017_104588511	3300014494	Fen	QRLRRRTSVVPIDFKAAITEDLAEIDLALSILNCLRNVNLARLALLQEAEKRMPKNRSE*
Ga0182017_106728391	3300014494	Fen	EDIKEIDLALSVLNGLRNVNAARLELLKEAESRDAGSKES*
Ga0182011_100368887	3300014496	Fen	MVPVDFKEAITQDIKEIDLALSVLNSLRDVNMARLALLHEAEKRSAEDTVTQSK*
Ga0182011_102344851	3300014496	Fen	MMTPVDFKAAIMEDIKEIDLALSVLNGIRNVNAARLALIKEAEARDAGSKEI*
Ga0182011_102890031	3300014496	Fen	MTAIDFKTAIVEDIKEIDLALSVLNGLRDVNVARLEVLLEADKRNEKR*
Ga0182011_102950951	3300014496	Fen	AITEDIKEIELALSVLNGLRDVNAARLALLEEAETRNAGGKES*
Ga0182011_104221243	3300014496	Fen	MMMPVDFKAAITEDVAEIELVLSVLNGLRNVKLARLALLKEAEARNAGDKDG*
Ga0182011_108150981	3300014496	Fen	MALIDFKAAITQDIAEIDLALSVLNGLRNVNLARLALLQEAEKRSEKA*
Ga0182021_100274903	3300014502	Fen	MVPVDFKEAINQDIKEIDLALSVLNSLRDVNMARLALLHEAEKRSAEDTVTQSK*
Ga0182021_100509067	3300014502	Fen	MALIDFKAAITQDIAEIDLALSVLNSLRDTNLARLALLHEAEKRAKELDIPIPEA*
Ga0182021_103743812	3300014502	Fen	MAPYNFKESIAEDIKEIDLALSVLNGLRDVNVARLALLKEAEERGI*
Ga0182021_105994911	3300014502	Fen	MMPVDFKVAITEDIKEIELALSVLNGLRDVNAARLALLEEAETRNAGGKES*
Ga0182021_107549441	3300014502	Fen	MLIDYKAAIAEDVKEIDLALSVLNGLRDVNMARLALIEEAEKRSKQT*
Ga0182021_109829992	3300014502	Fen	MIPVDFKVAINQDIKEIDLALSVLNSLRDTNLARLALIHEAEKRSAEDKQSK*
Ga0182021_114177261	3300014502	Fen	MVKPVDFKAAIAEDVKEIDLALSVLKGLRDANTARLALLKEAEARDAGSKVS*
Ga0182021_118911162	3300014502	Fen	PVDFKDAINQDIKEIDLALSVLNSLRDVNMARLALIHEAEKRSVEDTQSKQA*
Ga0182021_126209282	3300014502	Fen	MPLFDFKAAIAEDVKEIDLALSVLNGLRDVNMARLALIEEAEKRK*
Ga0182021_127391541	3300014502	Fen	MPIDFKAAIAEDVREIDLALSVLNGLRDVNKARLAIIEESEKRK*
Ga0182021_127911102	3300014502	Fen	AINQDIKEIDLALSVLNGLRDVNLARLALLQEAEKRSAEDKQSK*
Ga0182021_129249491	3300014502	Fen	MVGRQPNIIDFKAAIAEDIKEIDLALSVLNSLRDTNLSRLTLLHEAEKRSAEDSATRA*
Ga0182021_135972842	3300014502	Fen	MVPVDFKDAINQDIKEIDLALSVLNGLRDVNLARLALIHEAEKRSAEDKQSK*
Ga0182027_105296511	3300014839	Fen	MMPVDFKAAITEDIKEIELALSVLNGLRDVNAARLELLKEAEARDAGSKES*
Ga0182027_107312003	3300014839	Fen	MVPVDFKEAITQDIKEIDLALSVLNSLRDVNLARLALLHEAEKRSAEDKQSK*
Ga0182027_108612341	3300014839	Fen	MPLIDFKAAIAEEVKEIDLALSVLNGLRDVNMARLALIEEAEKRK*
Ga0182027_116958482	3300014839	Fen	MDFKSAIIQDIAEIDLVLRILDDLRKVNMARLEVLKEAEKRDGDPIK*
Ga0187850_101622193	3300017941	Peatland	SMDEWGRRSKMVPIDFKAAITQDIAEIDLALSVLNSLRDTNLAKLALLHEAAKRA
Ga0187778_109767651	3300017961	Tropical Peatland	MIVDFKSAIAQDIAEIELALSILNGLRNVNVARLEVLKEAEKRDGELIK
Ga0187777_106279032	3300017974	Tropical Peatland	MIPVDFKAAITEDVAEIELVLSVLDGLRNVNLARLALLREAEARNAGDKEG
Ga0187878_10457073	3300018005	Peatland	MDEWGRRSKMVPIDFKAAITQDIAEIDLALSVLNSLRDTNLAKLALLHEAAKRA
Ga0187866_12010182	3300018015	Peatland	MFPIDFKAAITQDITELDLALCVLNALRDANLARLALLQEAEKRSEEA
Ga0187886_10265968	3300018018	Peatland	MATIDFKAAILEDIAEIDLALSVLNSLRDTNLARLALLQEAEKREA
Ga0187886_10287757	3300018018	Peatland	MVPIDFKAAITQDIAEIDLALSVLNSLRDTNLAKLALLHEAAKRA
Ga0187886_10714653	3300018018	Peatland	MAPIDFKAAITQDITELDLALSVLNALRDVNLARLALLQEAEKRSEEA
Ga0187886_10826702	3300018018	Peatland	MGLIDFKAAITKDLAEIDLALSVLNGLREVNLARLALLQEAEKRSASESGTPSKEA
Ga0187886_11543122	3300018018	Peatland	MGTIDFKAAITQDIAELDLALSVLNALRDVNLARLALLLEAEKRCAENSSTQSEEA
Ga0187886_11685122	3300018018	Peatland	MVPIDFKAAITKDLAEIDLALSVLNNLREVNLARLALLQEAEKRSASESGTPSKKA
Ga0187886_12690832	3300018018	Peatland	MTPIISKETIAEDLKEIDLALSILNALRDVNLARLALLQEAEKRSASETDISDKEA
Ga0187886_12789781	3300018018	Peatland	MALIDFRASITQYITEIDLASSVLNGLRDTNLARLALLKEAEARKEV
Ga0187886_13695882	3300018018	Peatland	MAPVDFKAAITQDIAEIDLALSVLNGLRDTNFARLALLQEAEKRSAEDSGTHSKEA
Ga0187766_112617511	3300018058	Tropical Peatland	MVKPVDFKAAIAEDVKEIDLALSVLKGLRDANTARLALLKEAEARDAGNKES
Ga0182022_11633976	3300019785	Fen	MVGRQPNIIDFKSAIAEDIKEIDLALSVLNSLRDTNLSRLTLLHEAEKRSAEDSATRA
Ga0224515_10024511	3300022830	Soil	MAPYNFKESIAEDIKEIEVALSVLNGLRDVNTARLALLKEAEERGI
Ga0224515_10034033	3300022830	Soil	MIPIDFKAAINQDIKEIDLALSVLNSLRDVNMARLALLHEAEKRNAEDKQSK
Ga0224515_10073391	3300022830	Soil	MPIDYKAAIAEDVKEIDLALSVLNGLRDVSMARLALIEEAEKRSKQT
Ga0224515_10205361	3300022830	Soil	MMMPVDFKAAITEDVAEIELVLSVLNGLRDVKLARLALLKEAEARNAGDKDG
Ga0224515_10408452	3300022830	Soil	MASIDFKTAIIQDIAEIDIALSVLNGLRDTNLARLALLHEAEKRAIESDTPSQEA
Ga0224520_11352321	3300023075	Soil	MVPVDFKEAINQDIKEIDLALSVLNSLRDTNLARLALIHEAEKRSAEDKQSK
Ga0224516_10057753	3300023232	Soil	MMPVDFKAAITEDIKEIELALSVLNGLRDVNAARLALLEEAETRNAGGKES
Ga0224516_10112881	3300023232	Soil	MVPIDFKAAITQDIAEIDLALSILNGLRNVNLARLALLKEAETRSAESKEV
Ga0224521_10998351	3300024233	Soil	MIPIDFKAAINQDIKEIDLALSVLNSLRDVNMARLALLHEAEKRNAEDKQ
Ga0224523_11249022	3300024238	Soil	MVPVDFKEAINQDIKEIDLALSVLNSLRDVNMARLALLHEAEKRSAEDKQSK
Ga0224522_11234431	3300024240	Soil	MIPVDFKVAINQDIKEIDLALSVLNSLRDTNLARLALIHEAEKRSAEDKQSK
Ga0209039_1000808310	3300027825	Bog Forest Soil	MASSSHPIIDFKAAITEDIAEIDLALSVLNGLRNVNMARLAVLQEAESRKA
Ga0209039_100268813	3300027825	Bog Forest Soil	MASSSHPVIDFKAAITEDVAEIDLALSVLNGLRNVNLTRLEVLQESERREA
Ga0209039_100378315	3300027825	Bog Forest Soil	MASYPFDVKAAITEDIAEIDLALSVLNSLRDINLARLALLHEAEKRA
Ga0209039_100593103	3300027825	Bog Forest Soil	MSSSGRPIIDFKAAITEDVAEIDLALSVLNGLRNVNMARLAVLQEAESREA
Ga0209777_100068838	3300027896	Freshwater Lake Sediment	VVLIDFKKAISEDIAEIDLVLSVLNSLRYTNLARLALLREAEKRSAGDLGTQIKEA
Ga0209777_100134456	3300027896	Freshwater Lake Sediment	MAPVDFKVAITQDIAEIDLALSVLNGLRNANLARLALLLEAEKRSADDPVSQNKEA
Ga0209777_1001422512	3300027896	Freshwater Lake Sediment	MAPVDFKAAITQDITEIELALSVLNGLRNVNLARLALLHESEKRSTKNSVSQNKEV
Ga0209777_1001854811	3300027896	Freshwater Lake Sediment	MVPIDFKAAITQDIAEIDLALSVLNGLRNVNLARLALLHEAENREA
Ga0209777_100189684	3300027896	Freshwater Lake Sediment	MTPVDFKAAITEDVAEIDLVLSVLNGLRNVNLARLALLKEAEARSAEDSGTHSRGV
Ga0209777_100383153	3300027896	Freshwater Lake Sediment	MIPVDFKDAINQDINEIDLALSVLNSLRDVKVARLALLHEAEKRS
Ga0209777_100500296	3300027896	Freshwater Lake Sediment	MAPVDFKAAITQDITEIDLALSVLNGLRNANLARLALLHEADKRSANDPGSQNKEA
Ga0209777_100517275	3300027896	Freshwater Lake Sediment	MILMVPIDLKAAINHDIAEIDLALSVLNGLRKVNLARLALLHEAEKRGSEDTVIQSK
Ga0209777_100962295	3300027896	Freshwater Lake Sediment	MIPIDIKAAINHDIAEIDLALSVLNGLRKVNLVRLALIQEAEKRCAEDTQSK
Ga0209777_101129962	3300027896	Freshwater Lake Sediment	MVPIDLKAAINQDIKEIDLALSVLNSPRDVNLARLALLHEAEMRSAEDKQSK
Ga0209777_101149423	3300027896	Freshwater Lake Sediment	MIPVDFKEAINQDIKEIDLALSVLNGLRDVNMARLALLHEAEKRSAEDKQSK
Ga0209777_101696892	3300027896	Freshwater Lake Sediment	MTGSSQFELKRSISNDIKEIDLVLSVLNSLRDTNLARLALIYESEKRS
Ga0209777_101697363	3300027896	Freshwater Lake Sediment	MVPINFKAAITQDLAEIDLALSVLNGLRDTNLARLALLDEAEKRSVEDSVTRSKEV
Ga0209777_102005162	3300027896	Freshwater Lake Sediment	MVPIDFKDAINQDNKEIDLALSVLNGLRKVNLARLALLQEAEKRSTEDTQSKES
Ga0209777_102202662	3300027896	Freshwater Lake Sediment	MVPIDFKAAITKDLAEIDLALSVLNSLRDVNLARLALLQEAEKRSEEA
Ga0209777_102804823	3300027896	Freshwater Lake Sediment	MIPVDFKVAINQDIKEIDLALSVLNGLRDVNLARLALLREAEKRSAEDKQSKES
Ga0209777_103032222	3300027896	Freshwater Lake Sediment	MASSSHLIIDFKAAITEDIAEIDLALSILNGLRNVNTARLAILQEAESWEA
Ga0209777_103234452	3300027896	Freshwater Lake Sediment	MVPIDFKAAITQDIAEIDLALSILNGLRDVDMARLVLIQEAEARGASESATHNKEA
Ga0209777_103619482	3300027896	Freshwater Lake Sediment	MTTIDFKAAITEDIKEIDLALSILNSLRDVNKARLEVLLEAEKRSEKR
Ga0209777_103709522	3300027896	Freshwater Lake Sediment	MVPVDFKVAITQDIKEIDLALSVLSGLRDVNLARLALLHEAEKRSAEDKQSK
Ga0209777_103801852	3300027896	Freshwater Lake Sediment	MGPIDFKAAITKDLAELDLALSVLNSLRDVNLARLALLQEAEKRSSSESGNSSEEA
Ga0209777_105082351	3300027896	Freshwater Lake Sediment	VIPVDFKAAINQDIAEIDLALSVLNGLRNVNLARLALLKEAEKRGAESKEA
Ga0209777_105639562	3300027896	Freshwater Lake Sediment	MTPIDFKAAINHDIAEIDLALSVLNGLRNVNLARLEVLKEAEKRSAEDIQSKEA
Ga0209777_105995801	3300027896	Freshwater Lake Sediment	MVPLDLKAAINHDIAEIDLALSVLKGLRRVNLARLVLIQEAEK
Ga0209777_106801961	3300027896	Freshwater Lake Sediment	MAPIDFKAAINQDIAELDLALSILNALRDVNLARLALVLEAETRSTEDSGIKSKKA
Ga0209777_107099992	3300027896	Freshwater Lake Sediment	MSPIDFKPAITQDIAEIDLVLSVLNGLRNVNLARLALLVEAEKRSASEPGSSDKEA
Ga0209777_108314152	3300027896	Freshwater Lake Sediment	MVPIDFKAAINQDIAEIDLALSVLNSLRDVNLARLALIHEAEKRSAEDKQSK
Ga0209777_108974932	3300027896	Freshwater Lake Sediment	MVPIDFKAAISEDIKEIDLALSVLNGLRNVNMARLAVLQEAEKRSASSHP
Ga0209777_110368352	3300027896	Freshwater Lake Sediment	MSPIDFKPPITQDIAEIDLALSVLNGLRNVNLARLVLLQEAEARRAEDSVKQSKEA
Ga0209777_110550501	3300027896	Freshwater Lake Sediment	MVPIDFKAALNQDIAEIDLALSILNGLRDVDIARLALIQEAEERSAEDLGTQSKEA
Ga0209048_100900964	3300027902	Freshwater Lake Sediment	MILMVPIDLKAAINHDIAEIDLALSVLNGLRKVNLARLALIQEAEKRSTEDTQSKESQ
Ga0302323_1013769733	3300031232	Fen	MDFKSAIIQDIAEIDLVLSILDDLRKINMARLEVLKEAEKRE
Ga0302322_1013733051	3300031902	Fen	VVPVDFKAAITEDIAEIDLALSVLNSLRDVNLARLELLKEAEARSSESKEA
Ga0326726_102904762	3300033433	Peat Soil	MVMPVDFKAAIAEDIKEIDLAFSVLNSLKDVNTARLAMLEEAEARDAGSKES
Ga0326726_105036182	3300033433	Peat Soil	MPLIDFKAAIAEDVREIELALSVLNGLRDVNMARLALIEEAEKRSKQT
Ga0326726_105036184	3300033433	Peat Soil	MPIDLKAAIAEDIREIDLALSVLNGLRDVNKARLVIIEETEKRSEQM
Ga0326726_115255602	3300033433	Peat Soil	MVPIDFKDAINQDIKEIDLALSVLNGLRDVNLARLALIHEAEKRSAEDKQSK
Ga0334821_060111_28_165	3300033798	Soil	MPLIDFKAAIAEDVKEIDLALSVLNGLRDVNMARLALIEEAEKRK
Ga0334816_103295_401_523	3300033819	Soil	MPLIDFKAAIAEDVKEIDLALSVLNGLRDVNMARLALIEEA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F068308

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences