Metagenome / Metatranscriptome Family F068280

Overview

Basic Information

• Family ID: F068280
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 125
• Average Sequence Length: 57 residues
• Representative Sequence: MNRSLASWLADNPGGAVFVTGLLGLLPLFGLGFAFFLPGAVPALVVLVRGPRL
• Number of Associated Samples: 102
• Number of Associated Scaffolds: 125

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 59.35 %
• % of genes near scaffold ends (potentially truncated): 98.40 %
• % of genes from short scaffolds (< 2000 bps): 94.40 %
• Associated GOLD sequencing projects: 93
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.53

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (66.400 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil (23.200 % of family members)
• Environment Ontology (ENVO): Unclassified (41.600 % of family members)
• Earth Microbiome Project Ontology (EMPO): Unclassified (42.400 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Transmembrane (alpha-helical)
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 56.79%
  β-sheet: 0.00%
  Coil/Unstructured: 43.21%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF01084	Ribosomal_S18	66.40
PF01250	Ribosomal_S6	26.40
PF08032	SpoU_sub_bind	2.40
PF00773	RNB	2.40
PF00588	SpoU_methylase	1.60
PF08206	OB_RNB	0.80

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG0238	Ribosomal protein S18	Translation, ribosomal structure and biogenesis [J]	66.40
COG0360	Ribosomal protein S6	Translation, ribosomal structure and biogenesis [J]	26.40
COG0566	tRNA G18 (ribose-2'-O)-methylase SpoU	Translation, ribosomal structure and biogenesis [J]	4.00
COG0557	Exoribonuclease R	Transcription [K]	3.20
COG4776	Exoribonuclease II	Transcription [K]	3.20
COG0219	tRNA(Leu) C34 or U34 (ribose-2'-O)-methylase TrmL, contains SPOUT domain	Translation, ribosomal structure and biogenesis [J]	1.60
COG0565	tRNA C32,U32 (ribose-2'-O)-methylase TrmJ or a related methyltransferase	Translation, ribosomal structure and biogenesis [J]	1.60
COG1158	Transcription termination factor Rho	Transcription [K]	0.80
COG1278	Cold shock protein, CspA family	Transcription [K]	0.80

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	66.40 %
Unclassified	root	N/A	33.60 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	66.40 %
Unclassified	root	N/A	33.60 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	66.40 %
Unclassified	root	N/A	33.60 %

Level 4

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	64.00 %
Unclassified	root	N/A	33.60 %

Level 5

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	53.60 %
Unclassified	root	N/A	33.60 %

Level 6

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.60 %
Nevskiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	31.20 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.80 %

Level 7

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.60 %
Steroidobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae	30.40 %
unclassified Xanthomonadales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales	0.80 %

Level 8

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.60 %
Steroidobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter	30.40 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.80 %

Level 9

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	33.60 %
Steroidobacter denitrificans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	30.40 %
Xanthomonadales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	0.80 %

Associated Scaffolds

Scaffold	Taxonomy	Length
2162886007|SwRhRL2b_contig_936736	All Organisms → cellular organisms → Bacteria → Proteobacteria	1385
3300002961|JGI11641J44799_10139547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	679
3300003432|JGI20214J51088_10308488	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1080
3300003541|JGI20214J51650_10684788	All Organisms → cellular organisms → Bacteria → Proteobacteria	719
3300003861|Ga0031654_10227976	Not Available	536
3300003999|Ga0055469_10164066	All Organisms → cellular organisms → Bacteria	679
3300004157|Ga0062590_101407059	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	694
3300005208|Ga0069003_10024866	All Organisms → cellular organisms → Bacteria → Proteobacteria	892
3300005294|Ga0065705_10495406	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	783
3300005331|Ga0070670_100823732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	839
3300005331|Ga0070670_101856508	All Organisms → cellular organisms → Bacteria	555
3300005548|Ga0070665_101602058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	659
3300005830|Ga0074473_10608010	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1136
3300006844|Ga0075428_101431288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	725
3300006930|Ga0079303_10149991	All Organisms → cellular organisms → Bacteria	911
3300006969|Ga0075419_10225863	All Organisms → cellular organisms → Bacteria → Proteobacteria	1245
3300009037|Ga0105093_10059664	All Organisms → cellular organisms → Bacteria → Proteobacteria	1752
3300009075|Ga0105090_10821174	Not Available	565
3300009085|Ga0105103_10018872	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3378
3300009085|Ga0105103_10374472	Not Available	785
3300009091|Ga0102851_10948518	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	932
3300009094|Ga0111539_10572132	Not Available	1316
3300009094|Ga0111539_13423410	Not Available	510
3300009098|Ga0105245_11624347	Not Available	698
3300009167|Ga0113563_11740172	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	740
3300009177|Ga0105248_11967995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	664
3300009586|Ga0115591_1185180	Not Available	507
3300010045|Ga0126311_10370882	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1095
3300010144|Ga0115593_1029126	Not Available	529
3300012956|Ga0154020_10919051	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	681
3300012961|Ga0164302_11847244	Not Available	512
3300014313|Ga0075347_1027478	All Organisms → cellular organisms → Bacteria → Proteobacteria	1092
3300014316|Ga0075339_1077454	All Organisms → cellular organisms → Bacteria → Proteobacteria	864
3300014885|Ga0180063_1162585	Not Available	709
3300015256|Ga0180073_1089893	Not Available	658
3300015374|Ga0132255_104431696	Not Available	595
3300015374|Ga0132255_105948033	Not Available	516
3300017792|Ga0163161_11262374	Not Available	641
3300018469|Ga0190270_10051669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	2861
3300018481|Ga0190271_10486279	All Organisms → cellular organisms → Bacteria → Proteobacteria	1343
3300018481|Ga0190271_11189860	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	885
3300018481|Ga0190271_12306773	Not Available	643
3300020048|Ga0207193_1168788	All Organisms → cellular organisms → Bacteria → Proteobacteria	1793
3300020063|Ga0180118_1167834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	755
3300020067|Ga0180109_1307924	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	887
3300021962|Ga0222713_10324651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	972
3300025106|Ga0209398_1024167	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1764
3300025561|Ga0210119_1055983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	752
3300025899|Ga0207642_10532439	Not Available	723
3300025925|Ga0207650_10576358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	945
3300025927|Ga0207687_11295062	Not Available	626
3300025941|Ga0207711_11166438	Not Available	712
3300025950|Ga0210134_1005103	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1937
3300025981|Ga0207640_11385412	Not Available	630
3300025986|Ga0207658_12108111	Not Available	512
3300026061|Ga0208541_1019009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	673
3300026350|Ga0256823_1030587	Not Available	544
3300026976|Ga0207525_101781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	978
3300027715|Ga0208665_10037705	All Organisms → cellular organisms → Bacteria → Proteobacteria	1372
3300027715|Ga0208665_10277664	Not Available	526
3300027721|Ga0209492_1097009	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1038
3300027721|Ga0209492_1146596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	824
3300027743|Ga0209593_10257032	Not Available	606
3300027778|Ga0209464_10094326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1020
3300027880|Ga0209481_10410364	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	695
3300027886|Ga0209486_10997357	Not Available	562
3300027897|Ga0209254_10561585	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	813
3300027899|Ga0209668_10190685	All Organisms → cellular organisms → Bacteria → Proteobacteria	1270
3300027972|Ga0209079_10103388	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	973
3300028380|Ga0268265_12269813	Not Available	549
3300028596|Ga0247821_11267526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → unclassified Xanthomonadales → Xanthomonadales bacterium	503
3300028889|Ga0247827_11052472	Not Available	556
3300031538|Ga0310888_10729178	Not Available	610
3300031547|Ga0310887_10482663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	744
3300031548|Ga0307408_102123831	Not Available	542
3300031824|Ga0307413_10402053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1073
3300031858|Ga0310892_10806953	Not Available	651
3300031873|Ga0315297_10498682	Not Available	1023
3300031873|Ga0315297_11486252	Not Available	547
3300031873|Ga0315297_11589242	Not Available	526
3300031997|Ga0315278_11249862	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	726
3300031999|Ga0315274_11783207	Not Available	566
3300032002|Ga0307416_100093191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2594
3300032092|Ga0315905_11047619	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	681
3300032156|Ga0315295_11635304	Not Available	616
3300032168|Ga0316593_10117908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	952
3300032177|Ga0315276_11168113	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	812
3300032401|Ga0315275_11501695	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	723
3300032516|Ga0315273_10080856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4420
3300033406|Ga0316604_10617080	Not Available	596
3300033408|Ga0316605_10389283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1254
3300033408|Ga0316605_10790948	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	901
3300033408|Ga0316605_11438582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	668
3300033413|Ga0316603_10334470	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1349
3300033413|Ga0316603_10673574	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	964
3300033416|Ga0316622_101140967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	911
3300033418|Ga0316625_100086975	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1705
3300033419|Ga0316601_100687547	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1002
3300033419|Ga0316601_101360521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	714
3300033419|Ga0316601_102366303	Not Available	534
3300033434|Ga0316613_10087874	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1870
3300033481|Ga0316600_10506334	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	838
3300033481|Ga0316600_10825867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	654
3300033482|Ga0316627_100631960	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	981
3300033482|Ga0316627_100992713	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	813
3300033483|Ga0316629_11260101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	593
3300033485|Ga0316626_10949725	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	760
3300033487|Ga0316630_10611101	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	911
3300033487|Ga0316630_10827459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	796
3300033487|Ga0316630_11907375	Not Available	544
3300033488|Ga0316621_10002188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales	5728
3300033488|Ga0316621_10562840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	806
3300033488|Ga0316621_11176332	Not Available	578
3300033521|Ga0316616_100712886	All Organisms → cellular organisms → Bacteria → Proteobacteria	1203
3300033521|Ga0316616_101094174	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1003
3300033550|Ga0247829_10708675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	838
3300033557|Ga0316617_100947429	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	837
3300033557|Ga0316617_101299572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	726
3300034055|Ga0373892_010088	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Nevskiales → Steroidobacteraceae → Steroidobacter → Steroidobacter denitrificans	1092
3300034056|Ga0373893_005922	All Organisms → cellular organisms → Bacteria → Proteobacteria	1270
3300034080|Ga0373897_129082	Not Available	513
3300034147|Ga0364925_0061449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1291
3300034176|Ga0364931_0332347	Not Available	507

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	76.80%
Host-Associated	Host-Associated	20.00%
Engineered	Engineered	3.20%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	42.40%
Aquatic	Environmental → Aquatic	34.40%
Plants	Host-Associated → Plants	20.00%
Bioremediation	Engineered → Bioremediation	2.40%
Wastewater	Engineered → Wastewater	0.80%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	38.40%
Freshwater	Environmental → Aquatic → Freshwater	25.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere	14.40%
Marine	Environmental → Aquatic → Marine	6.40%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.60%
Sediment	Environmental → Aquatic → Sediment	2.40%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface	2.40%
Metal	Engineered → Bioremediation → Metal	2.40%
Floodplain	Environmental → Terrestrial → Floodplain	1.60%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.80%

Type

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	25.60%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	12.80%
Sediment	Environmental → Aquatic → Freshwater → Sediment	10.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.40%
Lake	Environmental → Aquatic → Freshwater → Lake	8.00%
Wetlands	Environmental → Aquatic → Marine → Wetlands	5.60%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.00%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.20%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.20%
Lentic	Environmental → Aquatic → Freshwater → Lentic	2.40%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.40%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified	2.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.40%
Unclassified	Engineered → Bioremediation → Metal → Unclassified	2.40%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.60%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.80%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	0.80%
Unclassified	Environmental → Aquatic → Marine → Unclassified	0.80%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.80%

Subtype

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	25.60%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	10.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.40%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	8.00%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	5.60%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.00%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.20%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	2.40%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.40%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	2.40%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.40%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.40%
Unclassified	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified	2.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.40%
Unclassified	Engineered → Bioremediation → Metal → Unclassified → Unclassified	2.40%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.60%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.80%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.80%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	0.80%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	0.80%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.80%

Habitat

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	23.20%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	7.20%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	7.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.00%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.00%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.20%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	3.20%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	2.40%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	2.40%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	2.40%
Deep Subsurface	Environmental → Terrestrial → Deep Subsurface → Unclassified → Unclassified → Deep Subsurface	2.40%
Sediment Slurry	Engineered → Bioremediation → Metal → Unclassified → Unclassified → Sediment Slurry	2.40%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	1.60%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	1.60%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	1.60%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.60%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.60%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.60%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	0.80%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.80%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Sediment	0.80%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.80%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.80%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	0.80%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	0.80%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.80%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.80%
Active Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Active Sludge	0.80%

Associated Samples

Taxon OID	Sample Name	Habitat Type
2162886007	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated
3300002961	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Feb2011 Site A1 Bulk	Environmental
3300003432	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental
3300003541	Wetland sediment microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site B2 Bulk	Environmental
3300003861	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - CRP12 CR	Environmental
3300003999	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2	Environmental
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental
3300005208	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - WestPond_CattailA_D2	Environmental
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated
3300005830	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.178_YBM	Environmental
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated
3300006930	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC	Environmental
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated
3300009037	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 1-3cm March2015	Environmental
3300009075	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015	Environmental
3300009085	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015	Environmental
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental
3300009169	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015	Environmental
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated
3300009586	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_11_14_A (Metagenome Metatranscriptome)	Environmental
3300010045	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot61	Environmental
3300010144	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_11_14_C (Metagenome Metatranscriptome)	Environmental
3300012956	Active sludge microbial communities from wastewater, Klosterneuburg, Austria - Klosneuvirus_20160825_MG	Engineered
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental
3300014313	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLC_D1	Environmental
3300014316	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushMan_CattailNLC_D1	Environmental
3300014885	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT47_16_10D	Environmental
3300015256	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLT333_16_10D	Environmental
3300015374	Col-0 rhizosphere combined assembly	Host-Associated
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental
3300020048	Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915	Environmental
3300020063	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT730_16_1Ra (Metagenome Metatranscriptome)	Environmental
3300020067	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLIBT47_16_1Ra (Metagenome Metatranscriptome)	Environmental
3300021962	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_649D	Environmental
3300025106	Groundwater microbial communities from Big Spring, Nevada to study Microbial Dark Matter (Phase II) - Ash Meadows Big Spring (SPAdes)	Environmental
3300025561	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - China_Bullhead_CordC_D2 (SPAdes)	Environmental
3300025899	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)	Host-Associated
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated
3300025950	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_CattailNLB_D2 (SPAdes)	Environmental
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated
3300026061	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - RushSE_TuleB_D1 (SPAdes)	Environmental
3300026350	Sediment microbial communities from tidal freshwater marsh on Altamaha River, Georgia, United States - 7-17 PU6	Environmental
3300026976	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G08A4-11 (SPAdes)	Environmental
3300027715	Deep subsurface shale carbon reservoir microbial communities from Ohio, USA - Methanogen_OWC (SPAdes)	Environmental
3300027721	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental
3300027778	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T4Bare1Fresh (SPAdes)	Environmental
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental
3300027897	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)	Environmental
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental
3300027972	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015 (SPAdes)	Environmental
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated
3300031824	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2	Host-Associated
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental
3300031873	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0	Environmental
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental
3300032002	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3	Host-Associated
3300032092	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 4 MA121	Environmental
3300032156	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G14_0	Environmental
3300032168	Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome)	Host-Associated
3300032177	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_0	Environmental
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental
3300032516	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_0	Environmental
3300033406	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_CT	Environmental
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental
3300033413	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_noCT	Environmental
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental
3300033419	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_noCT	Environmental
3300033434	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day10_CT_b	Environmental
3300033481	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day5_CT	Environmental
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental
3300033488	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D1_C	Environmental
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental
3300034055	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A3A4.2	Engineered
3300034056	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A3A4.3	Engineered
3300034080	Uranium-contaminated sediment microbial communities from bioreactor in Oak Ridge, Tennessee, United States - A5A4.1	Engineered
3300034147	Sediment microbial communities from East River floodplain, Colorado, United States - 44_j17	Environmental
3300034176	Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
SwRhRL2b_0528.00006910	2162886007	Switchgrass Rhizosphere	MNRSLAQWLADNPGAAVVLTGLLGLLPLLGLGFAFFLPGAVPALITLVRGPRLGAIVALGGSALLAA
JGI11641J44799_101395473	3300002961	Wetland	MNRSLPSWLADNPGGAVLVTGLLGLLPLFGLGFAFFLPGAVPAL
JGI20214J51088_103084883	3300003432	Wetland	MNRSLASWLADNPGGAVLVTGLLGLLPLFGLGFAFFLPGA
JGI20214J51650_106847883	3300003541	Wetland	MNRSLASWLADNPGGAVLVTGLLGLLPLFGLGFAFFLPGAVPALVVLVRGPRLGLSIAI
Ga0031654_102279761	3300003861	Freshwater Lake Sediment	MNRKFATWLSANWGGAVLVTGLLGLLPLIGLGFAFFLPGAV
Ga0055469_101640661	3300003999	Natural And Restored Wetlands	MNRSIANWLATNPGGAVFATGLLGLLPFFGVGFFFFLPGAVPALLALARGPRHGAMVAAGAAALLALAIWFIGRSVPV
Ga0062590_1014070591	3300004157	Soil	MNRSLAQWLAANPVAAVLVTGLLGLLPLLGLGIAAFLPGAVPAL
Ga0069003_100248661	3300005208	Natural And Restored Wetlands	MNRSLASWLADNPGGAVFVTGLLGLLPLFGLGFAFFLPGAVPALVVLVRGPRL
Ga0065705_104954063	3300005294	Switchgrass Rhizosphere	MNRSIANWLATNPGGAVFATGLLGLLPFFGIGFFFFLPGAVPALLALARGPRQ
Ga0070670_1008237323	3300005331	Switchgrass Rhizosphere	MNRSIANWLATNPGGAVFATGLLGLLPFFGVGFFFFLPGAVPALLALARGP
Ga0070670_1018565082	3300005331	Switchgrass Rhizosphere	MNRSLAQWLAANPVAAVLVTGLLGLLPLLGLGIAAFLPGAVPALIVLVRGERQGTMVALGASLILAAVVLMFGRPLWMGFVY
Ga0070665_1016020583	3300005548	Switchgrass Rhizosphere	MNRSFAGWLADNPGSAVFVTGLLGLLPMFGIGIAFFLPGAVPALLTLQRGPRAGVTVALGAA
Ga0074473_106080103	3300005830	Sediment (Intertidal)	MNRSLAQWLAGNPVGAVITTGLLGMLPLLGIGVAFFLPGAVPALIVLVRGEGQGAIVAVGASLLL
Ga0075428_1014312883	3300006844	Populus Rhizosphere	MNRSIANWLATNPGGAMFATGLLGLLPFFGVGFFFFLPGAVPALLALTRGPREGALVAAG
Ga0079303_101499913	3300006930	Deep Subsurface	MNRSFASWLTQSPGGAVFATGLLGLLPLFGLGFAFFLPGAVPALVSLVRGPRLGLAVALGATVLLTLAMW
Ga0075419_102258634	3300006969	Populus Rhizosphere	MNRSIANWLATNPGGAVFATGLLGLLPFFGIGFFFFLPGAVPALLALARGPR
Ga0105093_100596641	3300009037	Freshwater Sediment	MNRSLAQWLADNTVGAVLVTALLGLLPLIGIGVAFFLPGAVPALVA
Ga0105090_108211742	3300009075	Freshwater Sediment	MNRSLAQWLAGNPVGAVVATGLLGLLPLLGVGVLFFLPGAVPALIVLVRGERQGVIVAFGASLLLAAAMLAFGR
Ga0105103_100188721	3300009085	Freshwater Sediment	MNRSFASWIADSPGPAVHVTGLLGLLPLFGLGFAFFLPG
Ga0105103_103744721	3300009085	Freshwater Sediment	MNRSLAQWLGANPGGAVLVTGLLGLLPLLGVGFAFFLPGAVPALLVLARGGRVGVAVAVGASGLLAASMLLFGRPMGVG
Ga0102851_109485181	3300009091	Freshwater Wetlands	MSRTFSSWIADNPGAAVFVTALFGLLPLFGFGFAFFLPGAVPALVTLVRGPRGGAIVAAGASGLLALAML
Ga0111539_105721324	3300009094	Populus Rhizosphere	MNRSIANWLATNPGGAVFATGLLGLLPFFGVGFFFFLPGAVPALHALARGPRHGAMVAAGAAALLALAIWFIGR
Ga0111539_134234101	3300009094	Populus Rhizosphere	MNRSIANWLARNPGGAMFATGLLGLLPFFGVGFFFFLPGAVPALLALT
Ga0105245_116243473	3300009098	Miscanthus Rhizosphere	MRTMNRTLAQWLVDNPGPAVAITALLGMLPIVGIGLALFLCGAVPALLVLVRGPRIGASVAVGASLLLAASM
Ga0113563_117401721	3300009167	Freshwater Wetlands	MNRSLAQWLAGNPVGAVLVTGLLGLLPLFGVGVAFFLPGAVPALIVLVRGERQGVIVAVGASL
Ga0105097_100281581	3300009169	Freshwater Sediment	MSRTFSSWIADNPGAAVFVTALFGLLPLFGFGFAFFLPG
Ga0105248_119679951	3300009177	Switchgrass Rhizosphere	MNRSFAGWLADNPGSAVFVTGLLGLLPMFGIGIAFFLPGAVPALLTLQRGPRAGVTVALG
Ga0115591_11851801	3300009586	Wetland	MSRSFASWITENPGGAVFVTGLLGLLPLFGLGFAFFLPGAVPALVVLARGPRPGLAVALGATVLLTLAMWM
Ga0126311_103708823	3300010045	Serpentine Soil	MNRSLAQWLANNPGGAVVVTGLLGLLPLLGFGFAFFLPGAVPGFVLLERGPRAGLVVACGASLLLAGAMLAFGRPAP
Ga0115593_10291262	3300010144	Wetland	MSRSFASWITENPGGAVFVTGLLGLLPLFGLGFAFFLPGAVPALVVLARGPRPGLAVALGATVLL
Ga0154020_109190513	3300012956	Active Sludge	MNRSLAQWLAGNPVGAVLVTGLLGLLPLFGVGVAFFLPG
Ga0164302_118472442	3300012961	Soil	MRTMNRTLAQWLVDNPGPAVAITALLGMLPIVGIGLALFLCGAVPALLVLVRGPRIGAS
Ga0075347_10274783	3300014313	Natural And Restored Wetlands	MPADANMNRSLASWLADNPGGAVFVTGLLGLLPLFGLGFAFFLPGAVPALLVLLRGPRHGLAVALG
Ga0075339_10774543	3300014316	Natural And Restored Wetlands	MKRSLASWLADNPGGAVFVTGLLGLLPLFGLGFAFFLPGAVPALMVLLRG
Ga0180063_11625851	3300014885	Soil	MNRSLAKWLADNPGGAVVVTGLLGLLPLLGLGFAFF
Ga0180073_10898931	3300015256	Soil	MNRSLAKWLADNPGGAVVVTGLLGLLPLLGLGFAFFLPGA
Ga0132255_1044316961	3300015374	Arabidopsis Rhizosphere	MNRSIANWLATNPGGAVFATGLLGLLPFFGVGFFFFLPGAVPA
Ga0132255_1059480333	3300015374	Arabidopsis Rhizosphere	MNRSFAGWLADNPGSAVFVTGLLGLLPMFGIGIAFFLPGAVPALL
Ga0163161_112623741	3300017792	Switchgrass Rhizosphere	MMNRSLAQWLAANPVAAVLVTGLLGLLPLLGLGIAAFLPGAVPALIVLV
Ga0190270_100516691	3300018469	Soil	MNRSIANWLATNPGGAVFATGLLGLLPFFGIGFFFFLPGAVPALLALARGPRQGAMVAAGASLLLALAIWFIGR
Ga0190271_104862794	3300018481	Soil	MNRSIANWLATNPGGAVFATGLLGLLPFFGIGFAFFLPGAVPALIALARGPRAGALVAAGASVLL
Ga0190271_111898601	3300018481	Soil	MMNRSLAQWLLANPVAAVLVTGLLGLLPLLGLGVAAFLPGAVPALIVLARGERQGTMVALGASLILAAVVLMFG
Ga0190271_123067731	3300018481	Soil	MNRSIANWLATNPGGAVFATGLLGLLPFFGIGFFFFLPGAVPALLALARGP
Ga0207193_11687885	3300020048	Freshwater Lake Sediment	MSRTFSSWIADNPGAAVFVTALFGLLPLFGFGFAFFLPGAVPALVTLVRGPRGGVIVA
Ga0180118_11678341	3300020063	Groundwater Sediment	MNRSLAKWLADNPGGAVVVTGLLGLLPLLGLGFAFFLPGAVPALVALQRGPRAGAIVACGGTL
Ga0180109_13079241	3300020067	Groundwater Sediment	MNRSLAKWLADNPGGAVVATGLLGLLPLLGLGFAFFLPGAVPGL
Ga0222713_103246511	3300021962	Estuarine Water	MNRSLAQWLAGNPVGAVITTGLLGMLPLLGIGVAFFLPGAVPALVVLVRGERQGLIVALGASLLLA
Ga0209398_10241671	3300025106	Groundwater	MNRTFASWIAANPGAAVFLTGLLGLLPLFGLGFAFFLPGAVPALVALVRSPRDGVLVA
Ga0210119_10559831	3300025561	Natural And Restored Wetlands	MNRSFASWITANPGAAVFLTGLLGLLPLFGLGFAF
Ga0207642_105324391	3300025899	Miscanthus Rhizosphere	MNRSIANWLATNPGGAVFATGLLGLLPFFGIGFFFFLPGAVPALLALARGPRQGAMVAAGASLLLALAIWFIGRSVPV
Ga0207650_105763581	3300025925	Switchgrass Rhizosphere	MNRSIANWLATNPGGAVFATGLLGLLPFFGVGFFFFLPGAVPALLALARGPRQGAMVAAAAAVLLALAIW
Ga0207687_112950622	3300025927	Miscanthus Rhizosphere	MNRTLAQWLVDNPGPAVAITALLGMLPIVGIGLALFLCGAVPALLVLVRGPRIGASVAVGASLLLAASM
Ga0207711_111664381	3300025941	Switchgrass Rhizosphere	MNRSFAGWLADNPGSAVFVTGLLGLLPMFGIGIAFFLPGAVPALLTLQRGPRAGVTVALGAALLLALAMWLSGQPA
Ga0210134_10051031	3300025950	Natural And Restored Wetlands	MNRSFASWITANPGAAVFLTGLLGLLPLFGLGFAFFLPGAVPALVTLVRGPRAGLLV
Ga0207640_113854121	3300025981	Corn Rhizosphere	MNRTLAQWLVDNPGPAVAVTALLGMLPLFGLGFAFFLPGAVPALMVLVRGTRIGAAVAIAAACLLAASM
Ga0207658_121081111	3300025986	Switchgrass Rhizosphere	MNRTLAQWLVDNPGPAVAITALLGMLPIVGIGLALFLCGAVPALLVLVR
Ga0208541_10190091	3300026061	Natural And Restored Wetlands	MNNGSFASWIVDRPGPAVLVTGLLGLLPLLGLGFAFFRP
Ga0256823_10305873	3300026350	Sediment	MNRSFASWIADNPGRAVIVTGLLGLLPLFGLGFAFFLPGAVPALVTLVR
Ga0207525_1017811	3300026976	Soil	MNRSIANWLATNPGGAVFATGLLGLLPFFGIGFFFFL
Ga0208665_100377054	3300027715	Deep Subsurface	MSRSFASWITENPGGAVFVTGLLGLLPLFGLGFAFFLPGAVPALVVLARGPRPGLAVALGATVLLTLAMWMI
Ga0208665_102776642	3300027715	Deep Subsurface	MNRSFASWLTQSPGGAVFATGLLGLLPLFGLGFAFFLPGAVPALVSLVRGPRLGLAVALGATVLLT
Ga0209492_10970093	3300027721	Freshwater Sediment	MNRSLAQWLAGNPVGAVVATGLLGLLPLLGVGVLFFLPGAVPALIVLVRGERQGVIVAFGASLLLAAAMLAFGRP
Ga0209492_11465961	3300027721	Freshwater Sediment	MNRSFASWIADSPGPAVLVTGLLGLLPLFGLGFAFFLPG
Ga0209593_102570323	3300027743	Freshwater Sediment	MNRTFASWIAANPGAAVFLTGLLGLLPLFGLGFAFFLPGAVPALVALVRRPRDGVMVAAGAS
Ga0209464_100943263	3300027778	Wetland Sediment	MNRSFASWLTQSPGGAVFATGLLGLLPLFGLGFAFFLPGAVPALVSLVRGPRQGMAVALG
Ga0209481_104103643	3300027880	Populus Rhizosphere	MNRSIANWLATNPGGAVFATGLLGLLPFFGIGFFFFLPGAVPALLALARGPRQGAMV
Ga0209486_109973573	3300027886	Agricultural Soil	MNRSIANWLATNPGGAVFATGLLGLLPFFGIGFFFFLPGAVPALLALARGPRQGAMVA
Ga0209254_105615853	3300027897	Freshwater Lake Sediment	MNRTFASWIAANPGAAVLLTGLLGLLPLFGLGFAFFLPGAVPALVVLARGPR
Ga0209668_101906851	3300027899	Freshwater Lake Sediment	MSRSFASWITENPGGAVFVTGLLGLLPLFGLGFAFFLPGAVPALVVLAGR
Ga0209079_101033883	3300027972	Freshwater Sediment	MNRSLAQWLADNTVGAVLVTALLGLLPLIGIGVAFFLPGAVPALVVLVRGERAGAIIA
Ga0268265_122698131	3300028380	Switchgrass Rhizosphere	MNRSIANWLATNPGGAVFATGLLGLLPFFGIGFFFFLPGAVPALLALARGPRQGAMVAAGASLLLAL
Ga0247821_112675262	3300028596	Soil	MNRSLAKWLIENLGGAVVVTALLGLLPLLGVGFAFFLPGAVPALVVLKRDTRLGLGVAFGASGLLAASMLLFGRPMAVG
Ga0247827_110524721	3300028889	Soil	MNRTLAQWLVDNPGPAVAVTALLGMLPLFGLGFAFFLPGAVPALMVLVRGTRIGAAVAIAAACLLAASMLLFGRPVGVG
Ga0310888_107291781	3300031538	Soil	MNRSIANWLATNPGGAVFATGLLGLLPFFGVGFFFFLPGAVPALLALARGPRQGAIVAA
Ga0310887_104826633	3300031547	Soil	MNRSLAKWLADNLGGAVVVTALLGLLPLLGVGFAFFLPGAVPALIVLVRGTRAGI
Ga0307408_1021238313	3300031548	Rhizosphere	MNRPLAKWLADNPGGAVVVTALLGLLPLRGVGLAFFLPGA
Ga0307413_104020533	3300031824	Rhizosphere	MNRPLAKWLAENPGGAVVVTALLGLLPLRGVGLAFFLPGAVPALVTLMRGARAGALVATGAGLLLVVAVALTGR
Ga0310892_108069531	3300031858	Soil	MNRSLAQWLAANPVAAVLVTGLLGLLPLLGLGIAAFLPGAVPALIVLVRGERQGTTVALGASLILATVVLMFGRPL
Ga0315297_104986823	3300031873	Sediment	MNRTLATWLTANPGGAVLLTGLLGLLPLFGLGFAFFLPGAVPALVTLVRGGRSGLTVALGASGFLAGVMWLIGRPI
Ga0315297_114862521	3300031873	Sediment	VRETHRGANMNRTLALWLAANPGGAVLVTGLLGLLPLFGLGFAFFLPGAVPGLVTLVRGGRVGLAVALGAS
Ga0315297_115892422	3300031873	Sediment	MNRSLAQWLAGNPVGAVMVTALLGLLPLLGAGMAFFLPGAVPALLVLVRGVRAGAIVAAGASLLL
Ga0315278_112498623	3300031997	Sediment	MNRSLAQWLAGNPVGAVMVTALLGLLPLLGAGMAFFLPGAVPALLVLVRGVRAGAIVA
Ga0315274_117832071	3300031999	Sediment	MNRSLAQWLAGNPVGAVLVTGLLGLLPLLGVGVAFFLPGAVPALIVLVRGERQ
Ga0307416_1000931911	3300032002	Rhizosphere	MNRPLAKWLAENPGGAVVVTALLGLLPLRGVGLAFFLPGAVPALVTLMRGARAGALVATGAGLLLVVAVA
Ga0315905_110476193	3300032092	Freshwater	MNRSFASWLTQSPGGAVFATGLLGLLPLFGLGFAFFLPGAVPALVSLVRGPRLGMAVALGATVLL
Ga0315295_116353041	3300032156	Sediment	MNRSLAQWLAGNPVGAVLLTALLGLLPLLGVGIAFFLPGAVP
Ga0316593_101179083	3300032168	Rhizosphere	MNRSIASWLADNPLGAILTTGLLGLLPLFGFSFAFFVPGAVPALVLLMRGAQRALLVAGG
Ga0315276_111681131	3300032177	Sediment	MNRTLATWLTANPGGAVLLTGLLGLLPLFGLGFAFFLPGAVPALVTLV
Ga0315275_115016951	3300032401	Sediment	MNRTLATWLAANPGGAVLVTGLLGLLPLFGLGFAFFLPGAVPALVTLV
Ga0315273_100808561	3300032516	Sediment	VRETHRGANMNRTLALWLAANPGGAVLVTGLLGLLPLFGLGFAFFLPGAVPGLVTLVR
Ga0316604_106170803	3300033406	Soil	MNRSLAQWLAGNPVGAVLVTGLLGLLPLFGVGVAFFLPGA
Ga0316605_103892831	3300033408	Soil	MNRSFASWIADHPGRAVVVTGLLGLLPLFGLGFAFFLPGAVPALVTLVRGPRT
Ga0316605_107909481	3300033408	Soil	MNRSLAQWLAGNPVGAVLVTGLLGLLPLFGVGVAFFLPGAVPALIVL
Ga0316605_114385823	3300033408	Soil	MNRSFASWIAANPGAAVFLTGLLGLLPLFGLGFAFFLPGAVPALVVLARTPRDGALVALGASLLLAL
Ga0316603_103344704	3300033413	Soil	MKRTFASWIAANPGAAVFLTGLLGLLPLFGLGFAFFLPGAVPAL
Ga0316603_106735743	3300033413	Soil	MNRTFASWIAANPGAAVFLTGLLGLLPLFGLGFAFFLPGAVP
Ga0316622_1011409673	3300033416	Soil	MNRSFASWLTQSPGGAVFATGLLGLLPLFGLGFAFFLPGAVPALVSLVRGPKLGLAVALGAT
Ga0316625_1000869754	3300033418	Soil	MNRTFASWIAANPGAAVFLTGLLGLLPLFGLGFAFFLPGAVPALVVL
Ga0316601_1006875473	3300033419	Soil	MSRSFASWITENPGGAVFVTGLLGLLPLFGLGFAFFLPGAVPALVVLARGPRPGLAVALGATVL
Ga0316601_1013605211	3300033419	Soil	MSRTFSSWIADNPGAAVFVTALLGLLPLFGLGFAFFLPGAVPALVTLVRDA
Ga0316601_1023663031	3300033419	Soil	MNRTFASWIAANPGAAVFLTGLLGLLPLFGLGFAFFLPGAVPALVVLVRNPRDGVMVAAGASLLL
Ga0316613_100878744	3300033434	Soil	MNRSFASWIADHPGRAVVVTGLLGLLPLFGLGFAFFLPGAVPALVTLVRGPRTGVMVAAG
Ga0316600_105063343	3300033481	Soil	MNRTFASWIAANPGGAVFLTGLLGLLPLFGLGFAFFLPGAVPALVVLTRGPRDGV
Ga0316600_108258673	3300033481	Soil	MNRSFASWIADSPGPAVLVTGLLGLLPLFGLGFAFFLPGAVPALVTLMRGP
Ga0316627_1006319603	3300033482	Soil	MMNRSLAQWLAGNPVGAVVLTGLLGLLPLLGVGVAFFL
Ga0316627_1009927131	3300033482	Soil	MNRTFASWIAANPGAAVFLTGLLGLLPLFGLGFAFFLPGAVPALVVLVRSPRDGVMVAAG
Ga0316629_112601013	3300033483	Soil	MNGSFASWIADRPGPAMVVTGLLGLLPLFGLGFAFF
Ga0316626_109497251	3300033485	Soil	MSRSFASWITENPGGAVFVTGLLGLLPLFGLGFAFFLPGAVPALVVLARGPRPGLAVALG
Ga0316630_106111013	3300033487	Soil	MNRSFASWIADHPGRAVVVTGLLGLLPLFGLGFAFFLPGAVPAL
Ga0316630_108274591	3300033487	Soil	MNRNFAGWIAANPGAAVFVTGLLGLLPLFGLGFAFFLPGA
Ga0316630_119073751	3300033487	Soil	MNRTFASWIAANPGAAVFLTGLLGLLPLFGLGFAFFLPGAVPALVVLVRNPRDGVMVAAGAS
Ga0316621_100021888	3300033488	Soil	MNRSFASWLTQSPGGAVFATGLLGLLPLFGLGFAFFLPGAVPALVSLVRGPKLGLAVALGATVLLTLAMWTIGR
Ga0316621_105628401	3300033488	Soil	MNRSLAQWLAGNPVGAVLVTGLLGLLPLFGVGVAFFLPGAVPA
Ga0316621_111763321	3300033488	Soil	MNRSLAQWLAANPGSAVLVTGLLGLLPLLGVGFAFFLPGAVPALLVLARGGR
Ga0316628_1031774703	3300033513	Soil	MSRTFSSWIADNPGAAVFVTALFGLLPLFGFGFAFFLPGAVPA
Ga0316616_1007128864	3300033521	Soil	MSRSFASWITENPGGAVFVTGLLGLLPLFGLGFAFFLPGAVPALVVLARGPRPGLAVA
Ga0316616_1010941743	3300033521	Soil	MNRSFASWITENPGAAVFVTGLLGLLPLFGLGFAFFLPGAV
Ga0247829_107086751	3300033550	Soil	MNRSLAKWLIENLGGAVVVTALLGLLPLLGVGFAFFLPGAVPA
Ga0316617_1009474293	3300033557	Soil	MNRTFASWIAANPGAAVFLTGLLGLLPLFGLGFAFFLPGAVPALVVLMRSPRDGVLVAAGASLLLALA
Ga0316617_1012995723	3300033557	Soil	MNRSFASWIADSPGPAVLVTGLLGLLPLFGLGFAFFLPGAVPALV
Ga0373892_010088_951_1091	3300034055	Sediment Slurry	MNRSLAQWLADNTVGAVLVTALLGVLPLIGIGVAFFLPGAVPALVVL
Ga0373893_005922_1027_1269	3300034056	Sediment Slurry	MNRSLSQWLADNTVGAVLVTALLGVLPLIGIGVAFFLPGAVPALVVLVRGERQGVIVAAGASLLLAGAMLAFGRPVPVGLI
Ga0373897_129082_3_152	3300034080	Sediment Slurry	MNRTLASWIVANPGGAVVLTGLLGLLPLFGLGFAFFLPGAVPALVVLARG
Ga0364925_0061449_1052_1291	3300034147	Sediment	MNRSLAKWLADNPGGAVVVTGLLGLLPLLGLGFAFFLPGAVPGLVVLKRGPRAGAIVACGGTLMLVAAMWMFGRPAAVGV
Ga0364931_0332347_337_507	3300034176	Sediment	MNRSIANWLATNPGGAVFATGLLGLLPFFGVGFFFFLPGAVPALLALARGPRQGAMV