Metagenome / Metatranscriptome Family F068270

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F068270
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	48 residues
Representative Sequence	MHTRVLKPRNGPTLLVRPLRNGDVATVLAVFERLGPESRRARFNGPK
Number of Associated Samples	106
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	59.68 %
% of genes near scaffold ends (potentially truncated)	98.40 %
% of genes from short scaffolds (< 2000 bps)	95.20 %
Associated GOLD sequencing projects	102
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.41

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (79.200 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (12.800 % of family members)
Environment Ontology (ENVO)	Unclassified (32.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.600 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 25.33% β-sheet: 8.00% Coil/Unstructured: 66.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.41
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.41
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF01638	HxlR	41.60
PF03167	UDG	18.40
PF13302	Acetyltransf_3	3.20
PF07883	Cupin_2	2.40
PF08031	BBE	1.60
PF05958	tRNA_U5-meth_tr	1.60
PF03699	UPF0182	0.80
PF04073	tRNA_edit	0.80
PF07690	MFS_1	0.80
PF14026	DUF4242	0.80
PF02574	S-methyl_trans	0.80
PF04679	DNA_ligase_A_C	0.80
PF02811	PHP	0.80
PF01551	Peptidase_M23	0.80
PF07992	Pyr_redox_2	0.80
PF13180	PDZ_2	0.80
PF00353	HemolysinCabind	0.80
PF12680	SnoaL_2	0.80
PF01475	FUR	0.80
PF00583	Acetyltransf_1	0.80
PF00581	Rhodanese	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	41.60
COG0692	Uracil-DNA glycosylase	Replication, recombination and repair [L]	18.40
COG1573	Uracil-DNA glycosylase	Replication, recombination and repair [L]	18.40
COG3663	G:T/U-mismatch repair DNA glycosylase	Replication, recombination and repair [L]	18.40
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	1.60
COG2265	tRNA/tmRNA/rRNA uracil-C5-methylase, TrmA/RlmC/RlmD family	Translation, ribosomal structure and biogenesis [J]	1.60
COG0646	Methionine synthase I (cobalamin-dependent), methyltransferase domain	Amino acid transport and metabolism [E]	0.80
COG0735	Fe2+ or Zn2+ uptake regulation protein Fur/Zur	Inorganic ion transport and metabolism [P]	0.80
COG1615	Uncharacterized membrane protein, UPF0182 family	Function unknown [S]	0.80
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	0.80
COG2040	Homocysteine/selenocysteine methylase (S-methylmethionine-dependent)	Amino acid transport and metabolism [E]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	79.20 %
Unclassified	root	N/A	20.80 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	79.20 %
Unclassified	root	N/A	20.80 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	79.20 %
Unclassified	root	N/A	20.80 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	62.40 %
Unclassified	root	N/A	20.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.60 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	62.40 %
Unclassified	root	N/A	20.80 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	54.40 %
Unclassified	root	N/A	20.80 %
Chromatiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales	0.80 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	0.80 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	23.20 %
Unclassified	root	N/A	20.80 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	3.20 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	1.60 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.60 %
Chromatiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae	0.80 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	0.80 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.80 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.80 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	23.20 %
Unclassified	root	N/A	20.80 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	3.20 %
Thiocapsa	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa	0.80 %
unclassified Solirubrobacterales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales	0.80 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.80 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.80 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.80 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.80 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.80 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.80 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	23.20 %
Unclassified	root	N/A	20.80 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	3.20 %
Bailinhaonella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Bailinhaonella	0.80 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.80 %
Thiocapsa marina	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → Thiocapsa marina	0.80 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.80 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.80 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.80 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.80 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.80 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	23.20 %
Unclassified	root	N/A	20.80 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	3.20 %
Bailinhaonella thermotolerans	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Bailinhaonella → Bailinhaonella thermotolerans	0.80 %
Actinomadura atramentaria	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura atramentaria	0.80 %
Solirubrobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	0.80 %
Thiocapsa marina	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → Thiocapsa marina	0.80 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.80 %
Mycobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	0.80 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.80 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908044\|A5_c1_ConsensusfromContig1896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1459	Open in IMG/M
3300001361\|A30PFW6_1225874	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1015	Open in IMG/M
3300002568\|C688J35102_120031431	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	853	Open in IMG/M
3300004114\|Ga0062593_100919385	All Organisms → cellular organisms → Bacteria	887	Open in IMG/M
3300004479\|Ga0062595_100131871	All Organisms → cellular organisms → Bacteria	1410	Open in IMG/M
3300004479\|Ga0062595_100318444	All Organisms → cellular organisms → Bacteria	1061	Open in IMG/M
3300005435\|Ga0070714_102120283	All Organisms → cellular organisms → Bacteria	548	Open in IMG/M
3300005437\|Ga0070710_11328406	Not Available	535	Open in IMG/M
3300005437\|Ga0070710_11543566	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300005518\|Ga0070699_102062551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → Chromatiaceae → Thiocapsa → Thiocapsa marina	521	Open in IMG/M
3300005532\|Ga0070739_10462041	All Organisms → cellular organisms → Bacteria	579	Open in IMG/M
3300005538\|Ga0070731_10237413	All Organisms → cellular organisms → Bacteria	1210	Open in IMG/M
3300005547\|Ga0070693_101052159	All Organisms → cellular organisms → Bacteria	618	Open in IMG/M
3300005547\|Ga0070693_101456212	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	534	Open in IMG/M
3300005587\|Ga0066654_10275800	All Organisms → cellular organisms → Bacteria	893	Open in IMG/M
3300005764\|Ga0066903_102148147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1076	Open in IMG/M
3300005841\|Ga0068863_101180598	Not Available	771	Open in IMG/M
3300005893\|Ga0075278_1079373	Not Available	522	Open in IMG/M
3300006046\|Ga0066652_101517414	All Organisms → cellular organisms → Bacteria	620	Open in IMG/M
3300006046\|Ga0066652_101689191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	578	Open in IMG/M
3300006059\|Ga0075017_101581331	All Organisms → cellular organisms → Bacteria	517	Open in IMG/M
3300006173\|Ga0070716_101307749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → Actinomadura atramentaria	586	Open in IMG/M
3300006175\|Ga0070712_101089271	All Organisms → cellular organisms → Bacteria	693	Open in IMG/M
3300006358\|Ga0068871_100745485	Not Available	900	Open in IMG/M
3300006796\|Ga0066665_10182032	All Organisms → cellular organisms → Bacteria	1618	Open in IMG/M
3300006804\|Ga0079221_11419587	Not Available	553	Open in IMG/M
3300006806\|Ga0079220_10773446	All Organisms → cellular organisms → Bacteria → Proteobacteria	721	Open in IMG/M
3300006854\|Ga0075425_101024080	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300006914\|Ga0075436_100876149	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → unclassified Solirubrobacterales → Solirubrobacterales bacterium	671	Open in IMG/M
3300006914\|Ga0075436_101326580	All Organisms → cellular organisms → Bacteria	545	Open in IMG/M
3300009088\|Ga0099830_10971815	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	703	Open in IMG/M
3300009137\|Ga0066709_103813259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	547	Open in IMG/M
3300009143\|Ga0099792_10958978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	569	Open in IMG/M
3300009148\|Ga0105243_12639662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300009174\|Ga0105241_10777653	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	880	Open in IMG/M
3300009792\|Ga0126374_11567099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	543	Open in IMG/M
3300010039\|Ga0126309_10495771	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	750	Open in IMG/M
3300010362\|Ga0126377_12768297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	565	Open in IMG/M
3300010366\|Ga0126379_11947969	Not Available	690	Open in IMG/M
3300010371\|Ga0134125_10285864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1832	Open in IMG/M
3300010373\|Ga0134128_10874431	Not Available	995	Open in IMG/M
3300010399\|Ga0134127_10505682	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1221	Open in IMG/M
3300010400\|Ga0134122_13394544	Not Available	501	Open in IMG/M
3300011119\|Ga0105246_11751425	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	592	Open in IMG/M
3300012189\|Ga0137388_11217724	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	691	Open in IMG/M
3300012189\|Ga0137388_11507686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	610	Open in IMG/M
3300012198\|Ga0137364_10766335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	729	Open in IMG/M
3300012201\|Ga0137365_10188578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1544	Open in IMG/M
3300012201\|Ga0137365_10947473	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	626	Open in IMG/M
3300012202\|Ga0137363_10274903	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1376	Open in IMG/M
3300012202\|Ga0137363_11502458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	565	Open in IMG/M
3300012206\|Ga0137380_10841213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae	790	Open in IMG/M
3300012209\|Ga0137379_11605511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	549	Open in IMG/M
3300012354\|Ga0137366_10218298	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1420	Open in IMG/M
3300012356\|Ga0137371_11445398	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	502	Open in IMG/M
3300012911\|Ga0157301_10236499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	635	Open in IMG/M
3300012915\|Ga0157302_10442648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	547	Open in IMG/M
3300012918\|Ga0137396_11081278	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	575	Open in IMG/M
3300012957\|Ga0164303_10783838	Not Available	653	Open in IMG/M
3300012957\|Ga0164303_11436423	Not Available	518	Open in IMG/M
3300012958\|Ga0164299_10027418	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2429	Open in IMG/M
3300012958\|Ga0164299_10362824	All Organisms → cellular organisms → Bacteria	916	Open in IMG/M
3300012960\|Ga0164301_10238205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1187	Open in IMG/M
3300012960\|Ga0164301_10603073	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	811	Open in IMG/M
3300012960\|Ga0164301_11296790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	590	Open in IMG/M
3300012985\|Ga0164308_12031850	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	536	Open in IMG/M
3300012988\|Ga0164306_10513681	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	924	Open in IMG/M
3300013102\|Ga0157371_11469649	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	531	Open in IMG/M
3300013105\|Ga0157369_10643268	Not Available	1094	Open in IMG/M
3300013297\|Ga0157378_12346197	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	585	Open in IMG/M
3300013308\|Ga0157375_10396827	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1546	Open in IMG/M
3300013308\|Ga0157375_11471504	Not Available	803	Open in IMG/M
3300014058\|Ga0120149_1244224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	504	Open in IMG/M
3300014968\|Ga0157379_12123286	Not Available	557	Open in IMG/M
3300015242\|Ga0137412_10100617	All Organisms → cellular organisms → Bacteria	2349	Open in IMG/M
3300015372\|Ga0132256_100464377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1374	Open in IMG/M
3300015373\|Ga0132257_101419195	Not Available	884	Open in IMG/M
3300015374\|Ga0132255_101960919	Not Available	891	Open in IMG/M
3300017937\|Ga0187809_10406609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	519	Open in IMG/M
3300017947\|Ga0187785_10566669	Not Available	577	Open in IMG/M
3300017947\|Ga0187785_10667526	Not Available	542	Open in IMG/M
3300018073\|Ga0184624_10370748	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300020070\|Ga0206356_11666191	Not Available	560	Open in IMG/M
3300021560\|Ga0126371_11010935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	973	Open in IMG/M
3300021560\|Ga0126371_12240457	Not Available	659	Open in IMG/M
3300025898\|Ga0207692_10955103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	565	Open in IMG/M
3300025912\|Ga0207707_10225697	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1630	Open in IMG/M
3300025914\|Ga0207671_10072984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2562	Open in IMG/M
3300025919\|Ga0207657_10691364	Not Available	792	Open in IMG/M
3300025926\|Ga0207659_10317698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1284	Open in IMG/M
3300025927\|Ga0207687_10101001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2123	Open in IMG/M
3300025928\|Ga0207700_10245326	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1528	Open in IMG/M
3300025932\|Ga0207690_10948978	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	714	Open in IMG/M
3300025934\|Ga0207686_10253188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1287	Open in IMG/M
3300025937\|Ga0207669_11234604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	634	Open in IMG/M
3300025939\|Ga0207665_10103896	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1988	Open in IMG/M
3300025939\|Ga0207665_11189312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	608	Open in IMG/M
3300025944\|Ga0207661_11102258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	731	Open in IMG/M
3300025944\|Ga0207661_11110528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	728	Open in IMG/M
3300026078\|Ga0207702_10635707	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1049	Open in IMG/M
3300026325\|Ga0209152_10106218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1062	Open in IMG/M
3300027725\|Ga0209178_1093119	Not Available	1000	Open in IMG/M
3300027869\|Ga0209579_10309338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	852	Open in IMG/M
3300027869\|Ga0209579_10343980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	807	Open in IMG/M
3300027873\|Ga0209814_10383621	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → Bailinhaonella → Bailinhaonella thermotolerans	617	Open in IMG/M
3300027874\|Ga0209465_10574692	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	560	Open in IMG/M
3300028799\|Ga0307284_10494531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	502	Open in IMG/M
3300028824\|Ga0307310_10105844	Not Available	1256	Open in IMG/M
3300028828\|Ga0307312_10486355	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300028872\|Ga0307314_10290414	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	518	Open in IMG/M
3300031231\|Ga0170824_116373408	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	559	Open in IMG/M
3300031572\|Ga0318515_10154338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1225	Open in IMG/M
3300031847\|Ga0310907_10874970	Not Available	507	Open in IMG/M
3300031959\|Ga0318530_10370645	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	593	Open in IMG/M
3300031996\|Ga0308176_12566745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	543	Open in IMG/M
3300032001\|Ga0306922_11931796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	577	Open in IMG/M
3300032044\|Ga0318558_10087459	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1443	Open in IMG/M
3300032074\|Ga0308173_10394435	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	1216	Open in IMG/M
3300032089\|Ga0318525_10313461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	806	Open in IMG/M
3300032782\|Ga0335082_10178453	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2034	Open in IMG/M
3300032783\|Ga0335079_11333493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	715	Open in IMG/M
3300032829\|Ga0335070_11066295	Not Available	744	Open in IMG/M
3300033004\|Ga0335084_11368874	Not Available	703	Open in IMG/M
3300033412\|Ga0310810_10620963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1031	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.20%
Host-Associated	Host-Associated	20.80%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	76.80%
Plants	Host-Associated → Plants	20.80%
Aquatic	Environmental → Aquatic	2.40%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	76.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.80%
Rhizoplane	Host-Associated → Plants → Rhizoplane	3.20%
Sediment	Environmental → Aquatic → Sediment	1.60%
Freshwater	Environmental → Aquatic → Freshwater	0.80%
Roots	Host-Associated → Plants → Roots	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.80%
Loam	Environmental → Terrestrial → Soil → Loam	14.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.80%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	5.60%
Soil	Host-Associated → Plants → Rhizosphere → Soil	4.00%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.60%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.60%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.80%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.00%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.60%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	4.00%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.20%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.40%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.60%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.80%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.80%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	12.80%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.00%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	4.00%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.20%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	3.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.20%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.20%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.20%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	2.40%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.40%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.40%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.40%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.60%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.60%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.60%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.60%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.80%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.80%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.80%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.80%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908044	Soil microbial communities from permafrost in Bonanza Creek, Alaska, sample from Active Layer A5	Environmental	Open in IMG/M
3300001361	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A30-PF)- 6 month illumina	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005532	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen14_06102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005893	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_10C_0N_202	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012911	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013102	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG	Host-Associated	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014058	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25M	Environmental	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028872	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_204	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300031996	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032074	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032829	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.3	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A5_c1_01666040	2124908044	Soil	MHTRVIKPRHGPTLLVRPLERGDVATVSAVFERLGDESRR
A30PFW6_12258743	3300001361	Permafrost	MHTRVLKPRNGPTLLVRPLRNGDVATVLAVFERLGPESRRARFNGPK
C688J35102_1200314311	3300002568	Soil	MQTRYLTPKDGPHLIVRPLRNGDGTTVLQVFERLGADSRRARFNGPKPCLSAAE
Ga0062593_1009193851	3300004114	Soil	MHTRILKPRHGPTILVRPLRHGDVRTVMAVFERLGDESRRARFNGPKPCLRKAELQR
Ga0062595_1001318713	3300004479	Soil	MHTRVLKPRNGPTLIVRPLRHGDVATVSAVFGGLGERSRRTRFNGPK
Ga0062595_1003184442	3300004479	Soil	MHTRILKPRHAPSLLVRPLRHRDMQTVLAVFERLSDESRRNRFNGPKPSLT
Ga0070714_1021202832	3300005435	Agricultural Soil	MHTRILTPKHGPALVVRPLRDGDTGTVAAVFARLGPESRR
Ga0070710_113284062	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	VHTRVLKLKHGPTIHVRTLRNGDVDTVISMFNRLGEQARRKRFN
Ga0070710_115435661	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MHTRVLHLKHGPALLVRPLRRGDVRTVMAVFERLGEASRRARFNGPKPCLRMSEL
Ga0070699_1020625511	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MHTRVLKPKHGPTLLVRPLRHGDVGTIVAVFERLGERSRRARFNGPK
Ga0070739_104620411	3300005532	Surface Soil	MHTRLVTLKHGPPLLVRPLRHGDRQTVLAVFARLGDASRRSRFNGPKPCLDEGELERLARVDDGHH
Ga0070731_102374131	3300005538	Surface Soil	MHTRSLHLRDGRSLVVRPLRDGDLATVAAVFARVGPESRRARFNGP
Ga0070693_1010521592	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MHTRILTPKHGPSLVVRPLRDGDTATVVAVFARLSAESRRLRFNGPKPCL
Ga0070693_1014562121	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MHTRILKPKHGPVLLVRPLRRGDVRTVMAVFERLSESSRRARFNGPKPCLKTSELRQLAAID
Ga0066654_102758004	3300005587	Soil	VHTRIVKPKHGPRLVVRPLRDGDALTVLALFERLSERSRR
Ga0066903_1021481471	3300005764	Tropical Forest Soil	MHARIVKAKRGPEIIVRPLRHGDVDTVSAVFSRLGEESRRTRFLGPKLGLGETELRW
Ga0068863_1011805983	3300005841	Switchgrass Rhizosphere	MHTRVVKAKHGPELLVRPLRDGDTATVQAVFERLGNASRLARFN
Ga0075278_10793732	3300005893	Rice Paddy Soil	VNTRVLESKHGLSVLVRPLRNGDVDTVLAVFHRLGQESRRTRFNG
Ga0066652_1015174142	3300006046	Soil	MHTRVVKPKHGPELVVRPLKHGDTATVQAVFERLGDASRRARFNGLK
Ga0066652_1016891911	3300006046	Soil	MHTRVIKPRHGPTLIVRPLRHGDVRTVLAVFERLGDQSRRARFNGPKPCLSRDELRRLATIDS
Ga0075017_1015813311	3300006059	Watersheds	MHTRILKAKHGPTLLVKPLRNGDVRPIMAVFERLGDQSRRARFN
Ga0070716_1013077491	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MLSRLIKPPHGPSLIVRPLRDGDADTVRSVFGRLGDESRRMRFNGPKPCLSDV
Ga0070712_1010892712	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MHTRVLKPRNGPTLIVRPLRHGDVGTVLAVFDRLGPES
Ga0068871_1007454851	3300006358	Miscanthus Rhizosphere	MHTRVVKAKHGPELLVRPLRDGDTATVQAVFERLGN
Ga0066665_101820323	3300006796	Soil	MHTRVIKPKHGPTLIVRPLRHGDVRTVLAVFERLGDQSRRARFNGPKPCLSRDELRQLAT
Ga0079221_114195873	3300006804	Agricultural Soil	VHTRVLTATRGPVLVVRPLRHGDVRTVAAVFERLSDQSRRARFNGPKPCLSRTDLRQLALVDAT
Ga0079220_107734461	3300006806	Agricultural Soil	MHTRILTPKHGPALVVRPLRDGDTGTVAAVFARLGPESRRLRFNGPKPCLPDE
Ga0075425_1010240801	3300006854	Populus Rhizosphere	MHTRVVKPKRGPEILVRPFRRGDTAPVEAVFERLGEASRRARFNGAK
Ga0075436_1008761491	3300006914	Populus Rhizosphere	MHTRALNPKHGPALLVRPLRRGDVRTVMAVFHRLSDESRRARFNGS
Ga0075436_1013265802	3300006914	Populus Rhizosphere	MHTRVVKAKHGPELVVRPLRHGDTATVQAVFERLGDASRRARFN
Ga0099830_109718151	3300009088	Vadose Zone Soil	MHTRVIKPRHGPELLVRPLRRGDVATVLAVFERLGDDSRRARFHGPKP
Ga0066709_1038132591	3300009137	Grasslands Soil	MHTRVVRPKHGPELVVRPLRHGDSATVQAVFERLGDASRR
Ga0099792_109589782	3300009143	Vadose Zone Soil	MVSKLTMHTRVLKPRNGQTLIVRPLRNGDVGTVVAAFDRLGPESR
Ga0105243_126396621	3300009148	Miscanthus Rhizosphere	MRSRILEPGHSLSLQVRPLRHGDVRTVMAVFGRLGDESRRARFNRPKPCLTAGELRQLAT
Ga0105241_107776533	3300009174	Corn Rhizosphere	MHTRILKPKHGPTRLVRPLRRGDVRTVMAVFERLS
Ga0126374_115670992	3300009792	Tropical Forest Soil	MHTRVVRPKHGPELIVRPLRRGDTATVQAVFDRLGE
Ga0126309_104957711	3300010039	Serpentine Soil	MHTRIVKPERVSALLVRPLRHGDVRTVMSVFERLGDRSRRARFNGAKPCLSRSELRQLAS
Ga0126377_127682972	3300010362	Tropical Forest Soil	MYTRLVQPKHGPPLVVRPLRRGDVRTVLAVFERLGPDSRRLRFNG
Ga0126379_119479691	3300010366	Tropical Forest Soil	MHTRIVKPKRGPELLVRPLRHGDTATVAAVFARLGEASRLARFN
Ga0134125_102858644	3300010371	Terrestrial Soil	MHTRVVKPGYGPELVVRPLKPGDTASVHALFERLGEASRR
Ga0134128_108744311	3300010373	Terrestrial Soil	MHTRILTPKHGPSLVVRPLRDGDTATVVAVFARLSAESRRLRFNGPKPCLPEAELRHLAR
Ga0134127_105056823	3300010399	Terrestrial Soil	MHTRVVKAKHGPELVVRPLKHGDTATVQAVFERLGDASRRARFNGL
Ga0134122_133945442	3300010400	Terrestrial Soil	MHTRILKPRHGPTILVRPLRHGDVRTVMAVFERLGDESRRARF
Ga0105246_117514251	3300011119	Miscanthus Rhizosphere	MHTRVVKAKHGPELVVRPLKHGDTATVQAVFERLGDASRRARFNGLKHRLGEQ
Ga0137388_112177242	3300012189	Vadose Zone Soil	MHTRVIKPRHGPTLLVRPLRHGDVQTVLAVFGRLGEQSRRTRFNGPKPCLSALELEQLAA
Ga0137388_115076862	3300012189	Vadose Zone Soil	MHTRVIKPRHGPELLVRPLRRGDVATVLAVFERLGDDSRRARFHGPKPCLSDV
Ga0137364_107663352	3300012198	Vadose Zone Soil	MHTRVLKPKHGPTLLVRPLRHGDVRTVMAVFERLGH
Ga0137365_101885783	3300012201	Vadose Zone Soil	MHTRVIKPKHGPTLLVRPLRHGDVRTVLAVFERLGDRSRRTRFNGPKPCLSAAELRQLARIDS
Ga0137365_109474731	3300012201	Vadose Zone Soil	MHTRLVKPRQGPELLVRPLTSGDVETVTAVFARLG
Ga0137363_102749033	3300012202	Vadose Zone Soil	MHTRVLKPRNGPTLIVRPLRHGDVGTVLAVFDRLGPESRRARFNG
Ga0137363_115024582	3300012202	Vadose Zone Soil	MHTRAIKLKHGPTILVRPLRGGDVATVRAVFEQLGDESRRARFNG
Ga0137380_108412131	3300012206	Vadose Zone Soil	MHTRVIKLKHGPTILVRPLRAGDVATVRAVFEQLGDESRRTRFNGPKPCLSDAELAQLAA
Ga0137379_116055111	3300012209	Vadose Zone Soil	MHTRVLKPKHGPTLLVRPLRHGDVRTVMAVFERLGHESRRARFNGPKPCLSRDELRQLAS
Ga0137366_102182981	3300012354	Vadose Zone Soil	MHTRVIKPKHGPTLLVRPLRHGDVRTVLAIFERLGDRSRRTRFNGPKPCLSGEELRQLATID
Ga0137371_114453982	3300012356	Vadose Zone Soil	MHTRLVKPRQGPELLVRPLTSGDVETVTAVFARLGERSRRARFMGPK
Ga0157301_102364991	3300012911	Soil	VNLAHGRQLLIRPLRNGDVETVLDVFERLGERSRRARFNG
Ga0157302_104426482	3300012915	Soil	VHTRIVKPKRGPSLFVRPLRRGDTATVSAMFERLGEQSRRTRFLGPKPRLSATDLE
Ga0137396_110812782	3300012918	Vadose Zone Soil	MHTRVLKPRNGPMLIVRPLRHGDVGTVLAVFDRLGPESRRARFNGPKPCLSS
Ga0164303_107838381	3300012957	Soil	MHTSIIRPKHGPELIVRPLKHGDTVTIQTVFERLGEASRR
Ga0164303_114364231	3300012957	Soil	MHTRVVKAKHGPELLVRPLRDGDTATVQAVFERLGNA
Ga0164299_100274183	3300012958	Soil	MHTRVVKAKHGPELLVRPLRDGDTATVQAVFERLGNASRLARFNGLKRELGE*
Ga0164299_103628241	3300012958	Soil	MHTRVLQCHAGTLLVRPLRRGDVRTVLAVFERLGEESRRRRFNGAKPCL
Ga0164301_102382053	3300012960	Soil	MHTRVLKPRNGPTLIVRPLRHGDVATVYADFGRLRERSRRPRFNGPKPCLSRA
Ga0164301_106030732	3300012960	Soil	MHTRVLKPKHGPTLLVRPLRHGDVRTVVAVFERLGPQSRRARFNGPKPCLTAAELRQ
Ga0164301_112967902	3300012960	Soil	MHTRVLHLKHGPALLVRPLRRCDVRTVMAVFERLGEASRRARFNGPKPC
Ga0164308_120318501	3300012985	Soil	MHTRVLKPRNGPTLIVRPLRHGDVATVSAVFGRLGERSRRTRFNG
Ga0164306_105136811	3300012988	Soil	MHTRVLKPRNGPTLIVRPLRHGDVATVAAVFGRLGARSRRTRFNGPKPCLSPA
Ga0157371_114696492	3300013102	Corn Rhizosphere	MHTRILKPKHGPTLLVRPLRRGDVRTVMAVFERLSESSRRARFNGPKPCLKTSELP
Ga0157369_106432681	3300013105	Corn Rhizosphere	MHTRILKPRHAPTLLVRPLRHRDTQTVLALFERLSDES
Ga0157378_123461971	3300013297	Miscanthus Rhizosphere	MHTRVVKAKHGPELVVRPLKHGDTATVQAVFERLGDASRRARFNGLKHR
Ga0157375_103968274	3300013308	Miscanthus Rhizosphere	MHTRVLKPKNGPTLLVRPLRRGDVGTVCAMFARLGERSRRAR
Ga0157375_114715042	3300013308	Miscanthus Rhizosphere	MHTRVVKAKHGPELVVRPLKHGDTATVQAVFERLGD
Ga0120149_12442241	3300014058	Permafrost	MYTRVIKPRHGPTLLVRPLERGDVATVSAVFEQLGEQSRRARFNGPK
Ga0157379_121232863	3300014968	Switchgrass Rhizosphere	MHTRVVKAKHGPELLVRPLRDGDTATVQAVFERLGNASRLARFNGL
Ga0137412_101006174	3300015242	Vadose Zone Soil	MHTRAIKLKHGPTILVRPLRAGDVATVRAVFEQLGDSSRRARFNGPKPCLSDAEL
Ga0132256_1004643773	3300015372	Arabidopsis Rhizosphere	MHTRVVKAKHGPELVVRPLRHGDTATVQAVFERLGDAS
Ga0132257_1014191953	3300015373	Arabidopsis Rhizosphere	MHTRILKPRHGPTILVRPLRHGDVRTVMAVFERLGDES
Ga0132255_1019609192	3300015374	Arabidopsis Rhizosphere	MHTRILESRHAPTLLVRPLRHRDVHTVLAVFERLSDESR
Ga0187809_104066091	3300017937	Freshwater Sediment	MHTRVVKAKHGPELLVRPLRQGDTATVAAVFARLGDASRRARFNGL
Ga0187785_105666691	3300017947	Tropical Peatland	MRQALTDGSSSTRYLTPERGASVTARPLRHGDVRTVIGIFDRLSDRSRRYRFNGPKPCLS
Ga0187785_106675262	3300017947	Tropical Peatland	VHTRVLKSLGPALFVRPLRHGDTATVLAVFARLGEESRRARFNGAKPSLGESELRQLARVDG
Ga0184624_103707481	3300018073	Groundwater Sediment	MHTRVIKPKLAPTLLVRPLRHGDVRTVWGLFERLG
Ga0206356_116661912	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	VHTRVITPKHGPSLVVRPLRDGDTATVLAVFERLGEASRRARFNG
Ga0126371_110109353	3300021560	Tropical Forest Soil	MYTRIVKPKRGPEILIRPLRPGDTSTVEAVFERLGE
Ga0126371_122404571	3300021560	Tropical Forest Soil	MHTRVVRTKRGPELIVRPLRRGDTATVQAVFDRLGADSRLARFN
Ga0207692_109551032	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MVGISNRLMHTRVLHLKHGPALLVRPLRRGDVRTVMAVFERLGEASRRARFNGPKPCLRMSELRQLA
Ga0207707_102256971	3300025912	Corn Rhizosphere	MHTRVLRPKHGPTLLVRPLRHGDVRTVLAVFEQLGDESRRARFNGAKPCLSRTD
Ga0207671_100729841	3300025914	Corn Rhizosphere	MHTRVVKPTCGPELLIRPLKHGDTSTVEAMFGRLGDASRLARFNGLKHRL
Ga0207657_106913642	3300025919	Corn Rhizosphere	MQTRYLRLGRGPGLIVRPLRHGDAETVAAVFERLGESSRRN
Ga0207659_103176982	3300025926	Miscanthus Rhizosphere	MQTRHLRLGRGPGLIVRLLRHGDAETVAAVFERLGESSRRNRFNGPKP
Ga0207687_101010014	3300025927	Miscanthus Rhizosphere	MHTRVLKPKNGPTLLVRPLRRGDVGTVCAMFARLGERSRRA
Ga0207700_102453261	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VYTRILTPEHCPTLIVRPLRNGDRATVLGVFERLGEQSRRAR
Ga0207690_109489782	3300025932	Corn Rhizosphere	MHTRILTPKHGPSLVVRPLRDGDATTVAAVFARLSAESRRLRFNGPKPCLPEAEL
Ga0207686_102531883	3300025934	Miscanthus Rhizosphere	MHTRVVKAKHGPELLVRPLRHGDTATVQAVFERLGDASRRAR
Ga0207669_112346043	3300025937	Miscanthus Rhizosphere	MHTRIVKPKRGLTLLVRPLRPGDTATVSAMFERLGEKSRRTRFNGPKPRLSAGDLE
Ga0207665_101038961	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MHTRVVKPRCGPELLIRPLKHGDTSTVEAMFGRLGDASRLARFN
Ga0207665_111893122	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MLSRLIKPPHGPSLIVRPLRDGDTRTVAAVFGRLSTESRRLRFNGPKPCLPDEELRL
Ga0207661_111022581	3300025944	Corn Rhizosphere	MHTRVLKPRNGPTLIVRPLRHGDVATVSAVFGRLGERSRRT
Ga0207661_111105281	3300025944	Corn Rhizosphere	MQTRYLRLGRGPGLIVRPLRHGDAETVAAVFERLGESSRRNRFNGPKPRL
Ga0207702_106357073	3300026078	Corn Rhizosphere	MHTRVLKPRNGPTLIVRPLRHGDVATVSAVFGRLGERSRRTRFN
Ga0209152_101062183	3300026325	Soil	MHTRVLKPRNGPTLVVRPLRNGDVATVLSVFDRLGPQSRRTRFNGTKPC
Ga0209178_10931191	3300027725	Agricultural Soil	MHTRILTPKHGPSLVVRPLRDGDTATVVAVFARLSAESRRLRFNGPKPCLPEA
Ga0209579_103093383	3300027869	Surface Soil	MHTRSLHLRDGRSLVVRPLRDGDLATVAAVFARVGPESRRARFNGPKPCTDA
Ga0209579_103439803	3300027869	Surface Soil	MHTRALKPRHGPTILVRPLAHGDVRTVLAVFEQLSDASR
Ga0209814_103836211	3300027873	Populus Rhizosphere	MHTRILKPRHGPTILVRPLRHGDVRTVMAVFERLGDESRRARFN
Ga0209465_105746921	3300027874	Tropical Forest Soil	MHTRIVKPKHGPEIVVRPLRRGDTATVQAVFDRLGEASRVAR
Ga0307284_104945311	3300028799	Soil	MYTRVLKPKRGPTLFVRPLRHGDLRTVVGLFERLGEQSRRARFNGPKPCLSRS
Ga0307310_101058441	3300028824	Soil	VNTRVLKPRHGPTILVRPLRNGDVDAVLAVFHRLGEQSRRNRFNGPKTRL
Ga0307312_104863551	3300028828	Soil	MHTRILKPKHGPALVVRPLRHGAARTVMDLFERLGEESRRTRFNGPKPCLSRSE
Ga0307314_102904142	3300028872	Soil	VHTRIVKPKRGPALVVRPLRRGDTATVCAMFQRLGERS
Ga0170824_1163734081	3300031231	Forest Soil	MHTRVVKPKHGPERLVRPLRDGDTGTVQAVFERLGEASRLAR
Ga0318515_101543381	3300031572	Soil	MMHTRAIKPKSGPPLLVRPLRNRDVETVLALFARLGDESRRLR
Ga0310907_108749702	3300031847	Soil	MHARSIKARRGPELTVRLLRDGDVDTVLAVFERLGERSRRAR
Ga0318530_103706451	3300031959	Soil	MHTRVVKPKRGPEMLVRPLRHGDVDTVWAVFSRLSEESRRTRFLGPKLELGD
Ga0308176_125667452	3300031996	Soil	VHTRVITPKHGPSLVVRPLRDGDTATVLAVFERLGEASRRARFN
Ga0306922_119317961	3300032001	Soil	MMHTRTIKPKSGPPLLVRPLRNRDVETVLALFARLGDESRRLRFNGP
Ga0318558_100874591	3300032044	Soil	MHTRVVKPKRGPEMLVRPLRHGDVDTVWAVFSRLSEESRRTRFLGPK
Ga0308173_103944353	3300032074	Soil	VHTRLISSRNGPTLLVRPLRDGDAATVLAVFERLGEASRRARFNGPKPCLS
Ga0308173_122743951	3300032074	Soil	MQTRLITLKRGPRLIVRPLRNGDTATVLAVFGRLGADSRRLRFNGP
Ga0318525_103134612	3300032089	Soil	MHTRIVKPKHGPEFLVRPLRHGDTATVQAVFERLGADSRRARFNGS
Ga0335082_101784535	3300032782	Soil	MHTRIVRPRHGPELLVRPLRPGDTATVAAVFARLGDASRRARFNGLKHRLGEQE
Ga0335079_113334931	3300032783	Soil	MHTRVLKPMRGATLLVRPLRHGDVRTVIAVFERLGEQSRRARFNGPKPCLTVS
Ga0335070_110662951	3300032829	Soil	MHTRVLAPRHGPLLLVRPLRRGDERTVLDVFERLGEESRRARFNGP
Ga0335084_113688742	3300033004	Soil	MQTRILKPKHGPTLLVRPLRNGDADTVLSVFERLGDRSRRSR
Ga0310810_106209631	3300033412	Soil	MHTRILTPKQGPSLVVRPLRDGDTATVAAVFGRLSGESRRLRFNGPKPCLPDVELRHL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F068270

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences