NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F068240

Metagenome / Metatranscriptome Family F068240

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F068240
Family Type Metagenome / Metatranscriptome
Number of Sequences 125
Average Sequence Length 67 residues
Representative Sequence LSILPEIHADIPWPEVVQRLAYENEKLARRPQGHNGEYFVVCTLYYTPMESGFTFERGFDATP
Number of Associated Samples 109
Number of Associated Scaffolds 125

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 25.41 %
% of genes near scaffold ends (potentially truncated) 96.00 %
% of genes from short scaffolds (< 2000 bps) 90.40 %
Associated GOLD sequencing projects 103
AlphaFold2 3D model prediction Yes
3D model pTM-score0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (97.600 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(27.200 % of family members)
Environment Ontology (ENVO) Unclassified
(32.800 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(49.600 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 21.98%    β-sheet: 0.00%    Coil/Unstructured: 78.02%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 125 Family Scaffolds
PF07075DUF1343 86.40
PF00795CN_hydrolase 2.40
PF02880PGM_PMM_III 1.60
PF14451Ub-Mut7C 0.80
PF03070TENA_THI-4 0.80

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 125 Family Scaffolds
COG3876Exo-beta-N-acetylmuramidase YbbC/NamZ, DUF1343 familyCell wall/membrane/envelope biogenesis [M] 86.40
COG0033Phosphoglucomutase/phosphomannomutaseCarbohydrate transport and metabolism [G] 1.60
COG1109PhosphomannomutaseCarbohydrate transport and metabolism [G] 1.60

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms97.60 %
UnclassifiedrootN/A2.40 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2065487018|GPINP_F5MS3JC02GE0ZQAll Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium506Open in IMG/M
2162886012|MBSR1b_contig_14084201All Organisms → cellular organisms → Bacteria869Open in IMG/M
2170459006|GBPF9FW01DFF9FAll Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium521Open in IMG/M
2170459009|GA8DASG01CZ0QSAll Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium524Open in IMG/M
3300000597|AF_2010_repII_A1DRAFT_10097713All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium725Open in IMG/M
3300000955|JGI1027J12803_109608161All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium584Open in IMG/M
3300001145|JGI12682J13319_1005264All Organisms → cellular organisms → Bacteria1125Open in IMG/M
3300001431|F14TB_102788281All Organisms → cellular organisms → Bacteria774Open in IMG/M
3300002245|JGIcombinedJ26739_100482515All Organisms → cellular organisms → Bacteria1117Open in IMG/M
3300002245|JGIcombinedJ26739_101587204All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium551Open in IMG/M
3300004633|Ga0066395_10105339All Organisms → cellular organisms → Bacteria1366Open in IMG/M
3300005171|Ga0066677_10360663All Organisms → cellular organisms → Bacteria832Open in IMG/M
3300005172|Ga0066683_10319124All Organisms → cellular organisms → Bacteria965Open in IMG/M
3300005178|Ga0066688_10435717All Organisms → cellular organisms → Bacteria848Open in IMG/M
3300005294|Ga0065705_10473194All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium767Open in IMG/M
3300005294|Ga0065705_10560193All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium732Open in IMG/M
3300005436|Ga0070713_100686582All Organisms → cellular organisms → Bacteria977Open in IMG/M
3300005436|Ga0070713_101555832All Organisms → cellular organisms → Bacteria642Open in IMG/M
3300005454|Ga0066687_10688558All Organisms → cellular organisms → Bacteria608Open in IMG/M
3300005467|Ga0070706_100519342All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1108Open in IMG/M
3300005467|Ga0070706_102016968All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium522Open in IMG/M
3300005518|Ga0070699_100729674All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium906Open in IMG/M
3300005536|Ga0070697_101215004All Organisms → cellular organisms → Bacteria672Open in IMG/M
3300005554|Ga0066661_10534576All Organisms → cellular organisms → Bacteria704Open in IMG/M
3300005557|Ga0066704_10441078All Organisms → cellular organisms → Bacteria861Open in IMG/M
3300005561|Ga0066699_10822669All Organisms → cellular organisms → Bacteria653Open in IMG/M
3300005598|Ga0066706_10948840All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium667Open in IMG/M
3300005764|Ga0066903_100202824All Organisms → cellular organisms → Bacteria2971Open in IMG/M
3300006032|Ga0066696_10648558All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium682Open in IMG/M
3300006059|Ga0075017_101368250All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobiaceae556Open in IMG/M
3300006800|Ga0066660_10956454All Organisms → cellular organisms → Bacteria692Open in IMG/M
3300007258|Ga0099793_10495015All Organisms → cellular organisms → Bacteria607Open in IMG/M
3300007265|Ga0099794_10594189All Organisms → cellular organisms → Bacteria586Open in IMG/M
3300009038|Ga0099829_10725480All Organisms → cellular organisms → Bacteria826Open in IMG/M
3300009090|Ga0099827_10276989All Organisms → cellular organisms → Bacteria1415Open in IMG/M
3300009094|Ga0111539_10525911All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1378Open in IMG/M
3300009137|Ga0066709_101243688All Organisms → cellular organisms → Bacteria1095Open in IMG/M
3300009137|Ga0066709_101387515All Organisms → cellular organisms → Bacteria1023Open in IMG/M
3300009137|Ga0066709_102267650All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium746Open in IMG/M
3300009168|Ga0105104_10615350All Organisms → cellular organisms → Bacteria619Open in IMG/M
3300009545|Ga0105237_11179687All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium772Open in IMG/M
3300010301|Ga0134070_10035849All Organisms → cellular organisms → Bacteria1651Open in IMG/M
3300010303|Ga0134082_10294087All Organisms → cellular organisms → Bacteria679Open in IMG/M
3300010303|Ga0134082_10390785All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300010320|Ga0134109_10099561All Organisms → cellular organisms → Bacteria1011Open in IMG/M
3300010320|Ga0134109_10417151All Organisms → cellular organisms → Bacteria539Open in IMG/M
3300010321|Ga0134067_10412894All Organisms → cellular organisms → Bacteria543Open in IMG/M
3300010323|Ga0134086_10407987All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium547Open in IMG/M
3300010335|Ga0134063_10020849All Organisms → cellular organisms → Bacteria2708Open in IMG/M
3300010335|Ga0134063_10659021All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300010364|Ga0134066_10040040All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1155Open in IMG/M
3300010366|Ga0126379_10681539All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1120Open in IMG/M
3300010376|Ga0126381_105085489All Organisms → cellular organisms → Bacteria504Open in IMG/M
3300010863|Ga0124850_1075180All Organisms → cellular organisms → Bacteria1019Open in IMG/M
3300011269|Ga0137392_11567963All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium517Open in IMG/M
3300011269|Ga0137392_11645562All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium500Open in IMG/M
3300011271|Ga0137393_10022971All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia4592Open in IMG/M
3300012019|Ga0120139_1031023All Organisms → cellular organisms → Bacteria1240Open in IMG/M
3300012198|Ga0137364_10402137All Organisms → cellular organisms → Bacteria1025Open in IMG/M
3300012198|Ga0137364_11350751All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium529Open in IMG/M
3300012200|Ga0137382_10773601All Organisms → cellular organisms → Bacteria690Open in IMG/M
3300012201|Ga0137365_10777131All Organisms → cellular organisms → Bacteria699Open in IMG/M
3300012202|Ga0137363_10227792All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1507Open in IMG/M
3300012202|Ga0137363_11131508All Organisms → cellular organisms → Bacteria666Open in IMG/M
3300012203|Ga0137399_10371329All Organisms → cellular organisms → Bacteria1190Open in IMG/M
3300012205|Ga0137362_10875644All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium768Open in IMG/M
3300012206|Ga0137380_10562183All Organisms → cellular organisms → Bacteria1000Open in IMG/M
3300012208|Ga0137376_10772193All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium828Open in IMG/M
3300012208|Ga0137376_11769582All Organisms → cellular organisms → Bacteria508Open in IMG/M
3300012285|Ga0137370_10950804All Organisms → cellular organisms → Bacteria530Open in IMG/M
3300012351|Ga0137386_10114416All Organisms → cellular organisms → Bacteria1916Open in IMG/M
3300012354|Ga0137366_11198002All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium517Open in IMG/M
3300012356|Ga0137371_10355327All Organisms → cellular organisms → Bacteria1138Open in IMG/M
3300012356|Ga0137371_11111241All Organisms → cellular organisms → Bacteria594Open in IMG/M
3300012362|Ga0137361_11620146All Organisms → cellular organisms → Bacteria568Open in IMG/M
3300012582|Ga0137358_10770520All Organisms → cellular organisms → Bacteria641Open in IMG/M
3300012910|Ga0157308_10091755All Organisms → cellular organisms → Bacteria879Open in IMG/M
3300012917|Ga0137395_10083073All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter2094Open in IMG/M
3300012917|Ga0137395_11123723All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium555Open in IMG/M
3300012918|Ga0137396_10031137All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia3533Open in IMG/M
3300012925|Ga0137419_10119996All Organisms → cellular organisms → Bacteria1854Open in IMG/M
3300012927|Ga0137416_10345739All Organisms → cellular organisms → Bacteria1246Open in IMG/M
3300012930|Ga0137407_10486071All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1152Open in IMG/M
3300012977|Ga0134087_10621199All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium562Open in IMG/M
3300013296|Ga0157374_11073446All Organisms → cellular organisms → Bacteria825Open in IMG/M
3300013297|Ga0157378_11031085All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium858Open in IMG/M
3300013308|Ga0157375_12985258All Organisms → cellular organisms → Bacteria565Open in IMG/M
3300013770|Ga0120123_1121036All Organisms → cellular organisms → Bacteria608Open in IMG/M
3300015200|Ga0173480_10197342All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1064Open in IMG/M
3300015373|Ga0132257_101796918All Organisms → cellular organisms → Bacteria787Open in IMG/M
3300016422|Ga0182039_10817340All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium828Open in IMG/M
3300017654|Ga0134069_1042273All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1420Open in IMG/M
3300017657|Ga0134074_1306156All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300018482|Ga0066669_10094595All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus2055Open in IMG/M
3300020006|Ga0193735_1002107All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Spartobacteria → Chthoniobacterales → Chthoniobacteraceae → Candidatus Udaeobacter → Candidatus Udaeobacter copiosus6428Open in IMG/M
3300020059|Ga0193745_1079959All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium709Open in IMG/M
3300020580|Ga0210403_11131790All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium606Open in IMG/M
3300021478|Ga0210402_11032643All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium749Open in IMG/M
3300022534|Ga0224452_1010957All Organisms → cellular organisms → Bacteria2373Open in IMG/M
3300025910|Ga0207684_10013694All Organisms → cellular organisms → Bacteria7007Open in IMG/M
3300025915|Ga0207693_11020515All Organisms → cellular organisms → Bacteria631Open in IMG/M
3300025922|Ga0207646_10920925All Organisms → cellular organisms → Bacteria775Open in IMG/M
3300025926|Ga0207659_10521500All Organisms → cellular organisms → Bacteria1008Open in IMG/M
3300026306|Ga0209468_1131340All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium716Open in IMG/M
3300026312|Ga0209153_1284189All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium528Open in IMG/M
3300026329|Ga0209375_1161272All Organisms → cellular organisms → Bacteria927Open in IMG/M
3300026331|Ga0209267_1175893All Organisms → cellular organisms → Bacteria853Open in IMG/M
3300026469|Ga0257169_1045526All Organisms → cellular organisms → Bacteria683Open in IMG/M
3300026528|Ga0209378_1070427All Organisms → cellular organisms → Bacteria1610Open in IMG/M
3300026532|Ga0209160_1281612All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium564Open in IMG/M
3300026547|Ga0209156_10276654All Organisms → cellular organisms → Bacteria766Open in IMG/M
3300026557|Ga0179587_10990464All Organisms → cellular organisms → Bacteria554Open in IMG/M
3300027587|Ga0209220_1036662All Organisms → cellular organisms → Bacteria1314Open in IMG/M
3300027643|Ga0209076_1057395All Organisms → cellular organisms → Bacteria1104Open in IMG/M
3300027669|Ga0208981_1085579All Organisms → cellular organisms → Bacteria804Open in IMG/M
3300027727|Ga0209328_10068935All Organisms → cellular organisms → Bacteria1083Open in IMG/M
3300030844|Ga0075377_11441543All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium694Open in IMG/M
3300030991|Ga0073994_11975081All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium622Open in IMG/M
3300031715|Ga0307476_10569813All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium839Open in IMG/M
3300031740|Ga0307468_101023182All Organisms → cellular organisms → Bacteria729Open in IMG/M
3300031954|Ga0306926_12385704All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium583Open in IMG/M
3300033289|Ga0310914_11581827All Organisms → cellular organisms → Bacteria559Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil27.20%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil15.20%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil10.40%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere7.20%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil5.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil3.20%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.20%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil2.40%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.40%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.60%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere1.60%
PermafrostEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost1.60%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil1.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil1.60%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil1.60%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.60%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment0.80%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.80%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.80%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.80%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.80%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.80%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.80%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.80%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.80%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2065487018Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
2162886012Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
2170459006Grass soil microbial communities from Rothamsted Park, UK - March 2009 indirect in plug lysis (for fosmid construction) 0-10cmEnvironmentalOpen in IMG/M
2170459009Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect DNA Tissue lysis 0-10cmEnvironmentalOpen in IMG/M
3300000597Forest soil microbial communities from Amazon forest - 2010 replicate II A1EnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300001145Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2EnvironmentalOpen in IMG/M
3300001431Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemlyEnvironmentalOpen in IMG/M
3300002245Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)EnvironmentalOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300005171Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126EnvironmentalOpen in IMG/M
3300005172Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132EnvironmentalOpen in IMG/M
3300005178Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137EnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005467Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaGEnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005536Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaGEnvironmentalOpen in IMG/M
3300005554Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110EnvironmentalOpen in IMG/M
3300005557Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153EnvironmentalOpen in IMG/M
3300005561Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148EnvironmentalOpen in IMG/M
3300005598Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006032Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300007258Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3EnvironmentalOpen in IMG/M
3300007265Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009168Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015EnvironmentalOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010303Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09182015EnvironmentalOpen in IMG/M
3300010320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015EnvironmentalOpen in IMG/M
3300010321Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015EnvironmentalOpen in IMG/M
3300010323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010364Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010863Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)EnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012019Permafrost microbial communities from Nunavut, Canada - A7_5cm_12MEnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012205Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012354Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012362Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012910Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S198-509B-2EnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012918Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaGEnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300013770Permafrost microbial communities from Nunavut, Canada - A15_5cm_18MEnvironmentalOpen in IMG/M
3300015200Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)EnvironmentalOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300017654Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300017657Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300020006Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1m2EnvironmentalOpen in IMG/M
3300020059Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1a2EnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300021478Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-MEnvironmentalOpen in IMG/M
3300022534Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1EnvironmentalOpen in IMG/M
3300025910Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025922Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026306Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes)EnvironmentalOpen in IMG/M
3300026312Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)EnvironmentalOpen in IMG/M
3300026323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes)EnvironmentalOpen in IMG/M
3300026329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)EnvironmentalOpen in IMG/M
3300026331Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)EnvironmentalOpen in IMG/M
3300026469Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - DL-17-BEnvironmentalOpen in IMG/M
3300026528Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)EnvironmentalOpen in IMG/M
3300026532Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027587Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027643Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)EnvironmentalOpen in IMG/M
3300027669Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300027681Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027727Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300030844Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA11 EcM (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030991Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031715Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
GPINP_007489902065487018SoilLPQTLADIPWPEVVRRLAYENEKLARRPQGHNGEYFVVCTLYYTPMESGFTFERGFDATPTTRAGLRGRKYPR
MBSR1b_0795.000034602162886012Miscanthus RhizosphereMSILPQTLADIPWPEVVQRLAYENEKLARRPQGHNGEYFVVCTLYYTPMESGFTFERGFDATPTTKAGLRGRKYP
L01_074952602170459006Grass SoilMAWSTIARADIPWPEVVQRLAYENERLARRPQGHNGEYFVVCTLYYTPKESGFTFERGFD
F47_036469202170459009Grass SoilMAWSTIARADIPWPEVVQRLAYENERLARRPQGHNGEYFVVCTLYYTPKESGFTFERGFDAT
AF_2010_repII_A1DRAFT_1009771313300000597Forest SoilMSPAAFADIPWPEVVQRLKNENERLERRPGGHAGEYFIVCTLYYTPKESGFTFERGFDVTRVT
JGI1027J12803_10960816113300000955SoilPLALRADIPWPEVVQRLAYENEKLARRPQGHGGEYFVVCTLYYTPKESGFTF
JGI12682J13319_100526423300001145Forest SoilMSILSTACAEIPWPEVVQRLAVENEKLARRPGGHAGEYFIVCTLYYTPKESGFTFER
F14TB_10278828123300001431SoilVTCLDVRADIPWPEVVQRLAYENEKLARRPQGHSGEYFVVCTLYYTPLESGFTFERGF
JGIcombinedJ26739_10048251513300002245Forest SoilVIAGIAVASTLSILPELRADIPWPEVAQRLRQENEKLARRPGGHSGEYFLVCTLYYTPMESGFTAERG
JGIcombinedJ26739_10158720413300002245Forest SoilLSILPATRGDIPWPQVTQRLASENEKLARRPGGHAGEYFIVCTLYYTPKESGFTSGRGFDATRV
Ga0066395_1010533923300004633Tropical Forest SoilMTILSAALADIPWPEVVQRLKIENERLERRPGGHSGEYFIVCTLYYTPKESGFTAERGFD
Ga0066677_1036066313300005171SoilPWPEVVQRLAYENEKLARRPQGHNGEYFVVCTLYYTPKESGFTFERGFDATPVTKP*
Ga0066683_1031912423300005172SoilLQVRADIPWPEVVQRLANENEKLARRPQGHNGEYFVVCTLYYTPKESGFTFARGFDATPV
Ga0066688_1043571723300005178SoilLARARGDIPWPEVVQRLAYENEKLAHRPQGHSGEYFVVCTLYYTPMESGFTFERGFDATP
Ga0065705_1047319423300005294Switchgrass RhizosphereMLLSFSSHAHADIPWPEVVQRLAYENNKLARRPQGHNGEYFIVCTLYYTPKESGFTFERGFDAT
Ga0065705_1056019313300005294Switchgrass RhizosphereLIASYSHLRADIPWPEVVQRLAYENDKLARRPQGHNGEYFVVCTLYYTPKESGFTFERGFDATPVTKPGLHGR
Ga0070713_10068658223300005436Corn, Switchgrass And Miscanthus RhizosphereLADVRADIPWPEVVQRLAYENEKLARRPQGHSGEYLVVCTLYYTPMETGFTFERGFD
Ga0070713_10155583223300005436Corn, Switchgrass And Miscanthus RhizosphereMSILPQTLADIPWPEVVQRLAYENEKLARRPQGHNGEYFVVCTLYYTPMESGFTFERGFDATPTTKAGLRG
Ga0066687_1068855813300005454SoilLPEIRADIPWPEVVQRLAYENEKLAQRPQGHNGEYFVVCTVYYTPMESGFTFERG
Ga0070706_10051934223300005467Corn, Switchgrass And Miscanthus RhizosphereLPEIRADIPWPEVVQRLAYENEKLARRPQGHNGEYFVVCTLYYTPMESGFTFERGFDATPTTRPGLHGHKYPRDFLR
Ga0070706_10201696813300005467Corn, Switchgrass And Miscanthus RhizosphereLPAARADIPWPEVVQRLAYENEKLARRPGGHAGEYFIVCTLYYTPKESGFTFER
Ga0070699_10072967413300005518Corn, Switchgrass And Miscanthus RhizosphereMSILPATRADIPWPEVVQRLASENEKLARRPGGHAGEYFIVCTLYYTPKESGFTFSR
Ga0070697_10121500413300005536Corn, Switchgrass And Miscanthus RhizosphereMLIRLVIACLLSILPEIRADIPWPEVVKRLANENQRLARRPQGHAGEYFVVCTLYYTPMESGFTF
Ga0066661_1053457613300005554SoilLIIFAASYSQLCADIPWPEVVQRLSYENEKLARRPQAHNGEYFVVCTLYYTPKESGFTFQRGFDATPITKPGLKG
Ga0066704_1044107813300005557SoilLQLRGDIPWPEVVQRLAYENERLARRPQGHNGEYFVVCTLYYTPKESGFTFERGFDATPITK
Ga0066699_1082266913300005561SoilLIASCIALACSLSNLALVRADIPWPEVVQRLAQENEKLARRPQGHAGEYLVVCTLYYTPKESGFTFEGGFDATR
Ga0066706_1094884013300005598SoilMLIRLLIAACSLSILPASYADIPWPEVVQRLAQENEKLARRPQGHSGEYLVVCTLYYTPMESGFTFDRGFDATPVTKRGLH
Ga0066903_10020282433300005764Tropical Forest SoilVTAGSSQLFADIPWPEVVQRLAYENEKLARRPQGHNGDYFVVCTLYYTPKESGFTFERGFDATAVTKPGLAGRT
Ga0066696_1064855813300006032SoilLSILPATRADIPWPEVVQRLADENAKLARRPQGHAGEYFIVCTLYYTPKESGFT
Ga0075017_10136825023300006059WatershedsVIGIVFISILPSVCAEIPWPEVVQRLASENERLARRPGGHAGEYFIVCTLYYTPKESGFTFERGFDATRITRPGLHGHTYPRDFLGSVRK
Ga0066660_1095645413300006800SoilLGASYSQLRADIPWPEVVQRLAYENEKLARRPQGHNGEYFVVCTLYYTPKESGFTFERG
Ga0099793_1049501523300007258Vadose Zone SoilLAPARGDIPWPEVVQRLAYENEKLAHRPQGHSGEYFVVCTLYYTPMESGFTFERGFD
Ga0099794_1059418923300007265Vadose Zone SoilVLASYSQLRADIPWPEVVQRLAYENEKLARRPQGRNGEYFVVCTLYYTPKESGFTFERGFDATPITKPGLH
Ga0099829_1072548013300009038Vadose Zone SoilMTAAVSLCLLATMAQTRADIPWPEVVQRLAYENEKLAHRPQGHSGEYFVVCTLYYTPMESGFTFERGFDATRVTRPGLHGR
Ga0099827_1027698913300009090Vadose Zone SoilMSILPESYGDIPWPEVVQRLAYENEKLARRPQGHAGEYFIVCTLYYTPKESGFTFERG
Ga0111539_1052591123300009094Populus RhizosphereMMRVQLRAEIPWPEVVQRLAYENDKLARRSQGHNGEYFVVCTLYYTPKESGFTFERGFDATPVT
Ga0066709_10124368813300009137Grasslands SoilLILGVVAASSLSILAPLRADIPWPEVVQRLASENEKLARRLQGHSGEYFVVCTVYYTPMESGFTFERGFDATLVTRPGLHGRA
Ga0066709_10138751523300009137Grasslands SoilMSILPQTLADIPWPEVVQRLAYENEKLARRPQGHNGEYFIVCTLYYTTMESGFTFERGFD
Ga0066709_10226765023300009137Grasslands SoilMAWSTIARADIPWPEVVQRLAYENEKLARRPQGHNGEYFIVCTLYYTPKESGF
Ga0105104_1061535023300009168Freshwater SedimentVTCSDLRADIPWPEVVQRLAYENEKLARRPQGHSGEYFVVCTLYYTPLESGFTFERGFDA
Ga0105237_1117968713300009545Corn RhizosphereMSIIPQLHAEIPWPEVVRRLAYENDKLARRPQGHNGEYFVVCTLYYTPKESGFTFERG
Ga0134070_1003584913300010301Grasslands SoilMAWSTIARADIPWPEVVQRLAYENEKLARRPQGHNGEYFIVCTLYYTPKESGFTFER
Ga0134082_1029408723300010303Grasslands SoilMAWSTIARADIPWPEVVQRLAYENEKLARRPQGHNGEYFVVCTLYYTPKESGFTFERGFDATPVTK
Ga0134082_1039078513300010303Grasslands SoilLSILPEIHADIPWPEVVQRLAYENEKLARRPQGHNGEYFVVCTLYYTPMESGFTFERGFDATP
Ga0134109_1009956123300010320Grasslands SoilLQVRADIPWPEVVQRLANENEKLARRPQGHNGEYFVVCTLYYTPKESGFTFARGF
Ga0134109_1041715113300010320Grasslands SoilMAGCSQLRADIPWPEVMQRLAYENDKLARRPQGHNGEYFVVCTLYYTPKESGFTFERGFDATPVTKSG
Ga0134067_1041289413300010321Grasslands SoilMMAWSTIARADIPWAEVVQRLAYENEKLARRPQGHNGEYFVVCTLYYTPKESGFTFERGF
Ga0134086_1040798723300010323Grasslands SoilMAWSTIARADIPWPEVVQRLAYENEKLARRPQGHNGEYFIVCTLYYTPKESGFTFERGFDAT
Ga0134063_1002084933300010335Grasslands SoilMAWSTIARADIPWPEVVQRLAYENERLAQRPQGHNGEYFVVCTLYYTPVESGFTFERGFD
Ga0134063_1065902123300010335Grasslands SoilLSILPEIRADIPWPEVVQRLAYENEKLARRPQGHNGEYFIVCTLYYTPMESGFTFERGFDATPTT
Ga0134066_1004004023300010364Grasslands SoilLPLACADIPWPEVVQRLAYENEKLARRPQGHAGEYFIVCTLYYTPKESGFTFEHGFDATRVTKPGLHGRVYPRDFLRS
Ga0126379_1068153913300010366Tropical Forest SoilMSTLPATLADIPWPEVVQRLAYENDKLAQRPGGHAGEYFIVCTLYYTAKESGFTFERGFDATPVTKPGLHGRTYPRDF
Ga0126381_10508548923300010376Tropical Forest SoilLHADIPWPEVVQRLAYENDRLARRPQGHNGEYFVVCTLYYTPKESGFTFERGFDATPV
Ga0124850_107518033300010863Tropical Forest SoilLHADIPWPEVVQRLAYENDKLARRPQGHDGEYFIVCTLYYTPKESGFTFERGFD
Ga0137392_1156796323300011269Vadose Zone SoilMIATGSMAILSTARADIPWPEVVQRLAYENAKLERRPGGHAGEYFIVCTLYYTPKESGFTFERGFDAARVTKPGLHG
Ga0137392_1164556223300011269Vadose Zone SoilLPAARADIPWPEVVQRLAYENEKLARRPGGHAGEYFIVCTLYYTPKESGFTFERG
Ga0137393_1002297153300011271Vadose Zone SoilLPAARADIPWPEVVQRLAYENEKLARRPGGHAGEYFIVCTLYYTPKESGFTFERGFDATRVTKSGLH
Ga0120139_103102313300012019PermafrostLIVNSARAFCLLSISSTSRADIPWPEVVQRLKFENEKLAGRPQGHNGDYFIVCTLYYTSMESGFTAERGFDTTPVAARGLHGHKY
Ga0137364_1040213723300012198Vadose Zone SoilLTIFAASYSQLCADIPWPEVVQRLAYENEKLARRPQGHNGEYFVVCTLYYTPKESGFTFQRGFDATPIRK
Ga0137364_1135075113300012198Vadose Zone SoilLSILPEIRADIPWPEVVQRLAYENEKLARRPQGHNGEYFVVCTLYYTPMESGFTFERGFDATQTTRPGLHGRTYPRDFLR
Ga0137382_1077360113300012200Vadose Zone SoilLLILATGRADIPWPEVVQRLAYENEKLARRPQGHNGDYFVVCTLYYTPKESGFTMERGFDATPVTKPGLHG
Ga0137365_1077713113300012201Vadose Zone SoilLSILPEIRADIPWPEVVQRLAYENEKLARRPQGHNGEYFVVCTLYYTPMESGFTFA
Ga0137363_1022779223300012202Vadose Zone SoilMLSILPLTCADIPWPEVVQRLAYENEKLARRPQGHAGEYFIVCTLYYTPKESGFTFERGFDATRVSKAGLRGRAYPRDFLRSVM
Ga0137363_1113150813300012202Vadose Zone SoilLTIFAASYSQLCADIPWPEVVQRLSYENEKLARRPQGHNGEYFVVCTLYYTPKEAGFTFQRGFDATPIRKPGLKGRT
Ga0137399_1037132913300012203Vadose Zone SoilLPQLWPDIPWPEVVQRLKQENEKLAGRPQGHDGEYFVVCTLYYTPMESGFAAERGFDVTLETKPGLH
Ga0137362_1087564413300012205Vadose Zone SoilLAILSQLRADIPWPEVVQRLAYENEKLARRPQGHNGEYFVVCTLYYTPMESGFTFERGFDATPVTKPGLHGRTYPRDFL
Ga0137380_1056218313300012206Vadose Zone SoilLIARIVGLGVVAPTWAQIRADIPWPEVVQRLAYENEKLARRPQGHSGEYFIVCTLYYTPMESGFTFARGFDATPVTRPGLHGRKYSRDFLRS
Ga0137376_1077219323300012208Vadose Zone SoilLSILPATRADIPWPEVVQRLAFENEKLARRPQGHNGEYFIVCTLYYTPKESGFTFERGFDAARVSKSGLRGRT
Ga0137376_1176958213300012208Vadose Zone SoilVLIPQLHADIPWPEVVQRLAYENDKLARRPPGHNGEYFVVCTLYYTPKESGFTFERGFDATSVTKPGLHGRKY
Ga0137370_1095080413300012285Vadose Zone SoilLTAGCSQLRADIPWPEVVQRLAYENDKLARRPQGHNGEYFVVCTLYYTPKESGFTFERGFDATPVTKPGLR
Ga0137386_1011441633300012351Vadose Zone SoilMTAALSLCLLATMAQTRADIPWPEVVQRLAYENEKLAHRPQGHSGEYFVVCTLYYTPMESGFTF
Ga0137366_1119800213300012354Vadose Zone SoilLSIRTEIRADIPWPEVVQRLSYENEKLARRPQGHNGEYFVVCTLYYTPMESGFTFERGF
Ga0137371_1035532723300012356Vadose Zone SoilLIARIVGLGVVAPTWAQIRADIPWPEVVQRLAYENEKLARRPQGHSGEYFIVCTLYYTPMESGFTFARGFDATPVTRPGLHGRKY
Ga0137371_1111124123300012356Vadose Zone SoilLSISAGIRADIPWPEVVQRLAQENEKLARRPQGHSGEYFVVCTLYYTPMESGFTF
Ga0137361_1162014613300012362Vadose Zone SoilLLADIPWAEAKVRLARENETLARRPQGHAGTYFVICTLYYTPMESGFTPQRGFDVTAIAARGLRGR
Ga0137358_1077052013300012582Vadose Zone SoilLIALAAAAGSMSILPAARADIPWPEVVQRLKIENEKLERRPGGHSGEYFIVCTLYYTPKESGFT
Ga0157308_1009175523300012910SoilMSIIPHAYAEIPWPEVVRRLAYENDKLARRPQGHNGEYFIVCTLYYTPKESGFTFERGFDATPVTKPGLHGRKYARDFL
Ga0137395_1008307333300012917Vadose Zone SoilMSIIPQIQADIPWPEVVQRLAYENEKLARRPQGHSGEYFVVCTLYYTPMETGFTFERGF
Ga0137395_1112372313300012917Vadose Zone SoilMTAAISLCLLATMAQTRADIPWPEVVQRLAYENEKLAHRPQGHSGEYFVVCTLYYTPMESGFTFERGFDATPVTKPGLHGHMY
Ga0137396_1003113713300012918Vadose Zone SoilMVLCSLSILARARGDIPWPEVVQRLAYENKKLAHRPQGHSGEYFVVCTLYYTPMESGFTFERGFDATPVTRP
Ga0137419_1011999643300012925Vadose Zone SoilLILGVVAASSLSILAPLRADIPWPEVVRRLAQENEKLARRPQGHNGEYFVVCTLYYTPMESGFTFERGFDATPVTKPGLHGHTYPRDFLRSVR
Ga0137416_1034573913300012927Vadose Zone SoilLPQLWPDIPWPEVVQRLKQENEKLAGRPQGHDGEYFVVCTLYYTPMESGFAAERGFDVTLETKPGLHGHK
Ga0137407_1005671313300012930Vadose Zone SoilLSILPEIRADIPWPEVVQRLAYENEKLARRPQGHNGEYFVVCTLYYTPMESG
Ga0137407_1048607113300012930Vadose Zone SoilLAILSQLRADIPWPEVVQRLAYENEKLARRPQGYNGEYFVVCTLYYTPMESGFTF
Ga0134087_1062119913300012977Grasslands SoilLSILPEIHADIPWPEVVQRLAYENEKLARRPQGHNGEYFVVCTLYYTPMESGFTFERGFDATPTTRPGLHGRTYPRDFLR
Ga0157374_1107344613300013296Miscanthus RhizosphereLSISPEIRADIPWPEVVRRLAYENEKLARRPQGHNGEYFVVCTLYYTPMESGFTFERGFDATPTTRPGLRGHKY
Ga0157378_1103108513300013297Miscanthus RhizosphereMSIIPHAYAEIPWPEVVQRLAYENDKLARRPQGHNGEYFVVCTLYYTPKESGFTFERGFDATPVTKPGL
Ga0157375_1298525813300013308Miscanthus RhizosphereMSIIPHAYAEIPWPEVVQRLAYENDKLARRPQGHNGEYFVVCTLYYTPKESGFTFERGFDATPVTKPGLHGRKYARDFL
Ga0120123_112103613300013770PermafrostLADVRADIPWPEVVRRLAQENEKLARRPQGHNGEYFVVCTLYYTPMESGFTFERGFNATPVTRPG
Ga0173480_1019734223300015200SoilMSIIPQLHAEIPWPEVVRRLAYENDKLARRPQGHNGEYFVVCTLYYTPKESGFTFERGFDATPVTK
Ga0132257_10179691813300015373Arabidopsis RhizosphereMSIIQQLHADIPWPEVVQRLAYENDKLARRPQGHNGEYFVVCTLYYTPKESGFSLERGFDATPVTKPGLHGRKYPRD
Ga0182039_1081734023300016422SoilMLWADIPWPEVVQRLAYENDKLVRRPGGHAGEYFIVCTLYYTPKESGFTFERGFDATHVTKPGLHGRTYP
Ga0134069_104227323300017654Grasslands SoilVPEIRADIPWPEVVQRLAYENEKLARRPQGHNGEYFVVCTLYYTPMESGFTFERGFDATPTTRPGLH
Ga0134074_130615623300017657Grasslands SoilLSILPEIHADIPWPEVVQRLAYENEKLARRPQGHNGEYFVVCTLYYTPMESGFTFERGFDATPTTRSGLHGRTY
Ga0066669_1009459513300018482Grasslands SoilMSILPQTLADIPWPEVVQRLAYENEKLARRPQGHNGEYFVVCTLYYTPMESGFTF
Ga0193735_100210713300020006SoilLSILPEIHADIPWPEVVQRLAYENEKLARRPQGHNGEYFVVCTLYYTPMESGF
Ga0193745_107995923300020059SoilMTVLLVALTMSIIPQLHADIPWPEVVQRLAYENDKLARRPQGHNGEYFVVCTLYYTPKESGFTFERGFDATLVTKPGLHGRKYP
Ga0210403_1113179013300020580SoilLILGVIATSSLSILAPLRADIPWPEVVQRLAQENEKLARRPQGHNGQYFVVCTLYYTPMESGFTFERGFDATPV
Ga0210402_1103264323300021478SoilMLSEVRAEIPWPEVVRRLAYENEKLAQRPGGHAGEYFVVCTLYYTPMESGFISARGFDATPVTKPGLHGR
Ga0224452_101095723300022534Groundwater SedimentMAPTWAQIRADIPWPEVVQRLAYENEKLARRPRGHSGEYFVVCTLYYTPMESGFTFARGLMRHR
Ga0207684_1001369413300025910Corn, Switchgrass And Miscanthus RhizosphereMSILPQTRADIPWPEVVHRLTYENEKLARRPQGHNGEYFVVCTLYYTPMEAGFTFERGF
Ga0207693_1102051513300025915Corn, Switchgrass And Miscanthus RhizosphereMSVLSSALGDIPWSEVVPRLASENEKLARRPGGHAGEYFIVCTLYYTPKESGFTFERGFDATRV
Ga0207646_1092092513300025922Corn, Switchgrass And Miscanthus RhizosphereLSILAGIRADIPWPEVVRRLAQENEKLARRPQGHSGEYFVVCTLYYTPMESGFTFERGFDATPVTK
Ga0207659_1052150023300025926Miscanthus RhizosphereMRLQLFGDIPWPEVVQRLAYENDKLARRPQGHSGEYFVVCTLYYTPKESGFTFERGF
Ga0209468_113134023300026306SoilLSILTEIRADIPWPEVVQRLSYENEKLARRPQGHNGEYFVVCTLYYTPMESGFTFERGFDATPTTRPGLHGRTYPRDFLRS
Ga0209153_128418913300026312SoilLSILPAARADIPWPEVVQRLASENEKLARRPQGHNGEYFIVCTLYYTPKESGFTFE
Ga0209472_112894513300026323SoilMSILPQTLADIPWPEVVQRLAYENEKLARRPQGHNGEYFVVCTLYYTPMET
Ga0209375_116127213300026329SoilMSILPQTLADIPWPEVVQRLAYENEKLARRPQGHNGEYFIVCTLYYTPMESGFT
Ga0209267_117589313300026331SoilLSILARARGDIPWPEVVQRLAYENEKLAHRPQGHSGEYFVVCTLYYTPMESGFTFERGFDATPVT
Ga0257169_104552613300026469SoilMSILPQTLADIPWPEVVQRLAYENEKLARRPQGHNGEYFIVCTLYYTPMESGFTFERGFDATPTTKAGLHARKYPRDFLRS
Ga0209378_107042713300026528SoilLSILPEIHADIPWPEVVQRLAYENEKLARRPQGHNGEYFVVCTLYYTPMESGFTFERGFDATPTTRSGLHG
Ga0209160_128161223300026532SoilLSILTEIRADIPWPEVVQRLSYENEKLARRPQGHNGEYFVVCTLYYTPKESGFTFQRGFDATPITKPGLKGRTY
Ga0209156_1027665423300026547SoilMLSILPLTRADIPWPEVVQRLAYENEKLARRPQGHAGEYFIVCTLYYTPKESGFTFERGFDSTRVTKSGLHGRAYPRDFLRS
Ga0179587_1099046423300026557Vadose Zone SoilMLSEVRAEIPWPEVVRRLAYENEKLTQRPGGHAGEYFVVCTLYYTPMESGFTSARGFDATPITKPGLHGRKYP
Ga0209220_103666223300027587Forest SoilVIAGIAVASTLSILPELRADIPWPEVAQRLRQENEKLARRPGGHNGEYFLLCTLYYTPMESGFTADRGSDATH
Ga0209076_105739513300027643Vadose Zone SoilLPEIRADIPWPEVVQRLAYENEKLARRPQGHNGEYFVVCTVYYTPMESGFTFERGFDATQITRPG
Ga0208981_108557913300027669Forest SoilVIAGIAVASTLSILPELRADIPWPEVAQRLRQENEKLARRPGGHNGEYFLVCTLYYTPMESGFTAARGFDAAP
Ga0208991_100284613300027681Forest SoilVCAIGSLSILPVLRADIPWPEVVQRLRQENEKLANRPGGHNGEYFLVCTLYYTPVESGF
Ga0209328_1006893523300027727Forest SoilLSILPATRGDIPWPQVTQRLASENEKLARRPGGHAGEYFIVCTLYYTPKESGFTSGRGFDATRVTKRGL
Ga0075377_1144154323300030844SoilLAILSQLRADIPWPEVVQRLAYENEKLARRPQGHNGDYFVVCTLYYTPMESGFTFGRGFDATPVTK
Ga0073994_1197508123300030991SoilLILGVVAATSLSILAALPADIPWPEVVQRLAQENEKLARRPQGHNGQYFVICTLYYTPMESGFTFERGFD
Ga0307476_1056981313300031715Hardwood Forest SoilLILGVVAATSLSILAPLPADIPWPKVVQRLAQENEKLARRPQGHNGQYFVVCTLYYTPMESGFTFERGFDATPVTKPGLHGHTYPRDFLRSVKK
Ga0307468_10102318223300031740Hardwood Forest SoilLIATLSISISPQVGADIPWPEVAKRLAYENERLARRPQGHAGEYFVVCTLYYTPMESGFTFERGFDA
Ga0306926_1238570413300031954SoilMLWADIPWPEVVQRLAYENDKLVRRPGGHAGEYFIVCTLYYTPKESGFTFERGFDAT
Ga0310914_1158182713300033289SoilADIPWPEVVQRLAYENEKLARRPQGHAGEYFVVCTLYYTPKESGFTFARGFDATPVTKPGLHG

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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