Metagenome / Metatranscriptome Family F068238

Basic Information
Family ID	F068238
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	129 residues
Representative Sequence	GAVMTAKFDCLQITGNRAVMSGIISESNIAAAIGLRVLLVVEDNGEGVNTSTPDKLTWGVYQPAGGNWIPKDAERDDDNGASLTWIARDAEREDDPGVPSNQSKVIGCQSFPLSSYSFVDVKHGGGNIQVQP
Number of Associated Samples	100
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.28 %
% of genes near scaffold ends (potentially truncated)	88.80 %
% of genes from short scaffolds (< 2000 bps)	90.40 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Most Common Taxonomy
Group	Bacteria (62.400 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (12.800 % of family members)
Environment Ontology (ENVO)	Unclassified (47.200 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (64.800 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 3.75% β-sheet: 30.62% Coil/Unstructured: 65.62%
Feature Viewer

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Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF13360	PQQ_2	15.20
PF06736	TMEM175	11.20
PF13429	TPR_15	3.20
PF13570	PQQ_3	1.60
PF13620	CarboxypepD_reg	1.60
PF00795	CN_hydrolase	1.60
PF13414	TPR_11	0.80
PF14559	TPR_19	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG3548	Uncharacterized membrane protein	Function unknown [S]	11.20

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	62.40 %
Unclassified	root	N/A	37.60 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	62.40 %
Unclassified	root	N/A	37.60 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	62.40 %
Unclassified	root	N/A	37.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.60 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	26.40 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.40 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.60 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.60 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	7.20 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1.60 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.60 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.80 %
Blastocatellia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia	0.80 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.20 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1.60 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.60 %
Blastocatellales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales	0.80 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	0.80 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.20 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.60 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.60 %
Pyrinomonadaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae	0.80 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	0.80 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.20 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.60 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.60 %
unclassified Pyrinomonadaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae	0.80 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.80 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.20 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.60 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.60 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.80 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.80 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	37.60 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	7.20 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	1.60 %
Streptomyces afghaniensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces afghaniensis	0.80 %
Streptomyces viridochromogenes	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces viridochromogenes	0.80 %
Pyrinomonadaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	0.80 %
Acidobacteriaceae bacterium KBS 83	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	0.80 %
Nostocales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459017\|G14TP7Y02JCRIC	All Organisms → cellular organisms → Bacteria	614	Open in IMG/M
3300000532\|CNAas_1012001	Not Available	590	Open in IMG/M
3300000890\|JGI11643J12802_11658057	All Organisms → cellular organisms → Bacteria → Acidobacteria	881	Open in IMG/M
3300000953\|JGI11615J12901_10456325	Not Available	591	Open in IMG/M
3300000955\|JGI1027J12803_100900551	All Organisms → cellular organisms → Bacteria	567	Open in IMG/M
3300000955\|JGI1027J12803_101392206	All Organisms → cellular organisms → Bacteria	1683	Open in IMG/M
3300001431\|F14TB_106351641	Not Available	580	Open in IMG/M
3300003203\|JGI25406J46586_10147592	Not Available	687	Open in IMG/M
3300003267\|soilL1_10035029	All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → unclassified Pyrinomonadaceae → Pyrinomonadaceae bacterium	2182	Open in IMG/M
3300003319\|soilL2_10041824	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium KBS 83	5639	Open in IMG/M
3300003993\|Ga0055468_10035672	All Organisms → cellular organisms → Bacteria → Acidobacteria	1192	Open in IMG/M
3300004114\|Ga0062593_101966751	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces afghaniensis	648	Open in IMG/M
3300004157\|Ga0062590_100852610	All Organisms → cellular organisms → Bacteria → Acidobacteria	846	Open in IMG/M
3300004157\|Ga0062590_101145421	Not Available	753	Open in IMG/M
3300004479\|Ga0062595_100943148	All Organisms → cellular organisms → Bacteria	733	Open in IMG/M
3300004480\|Ga0062592_100904324	All Organisms → cellular organisms → Bacteria → Acidobacteria	796	Open in IMG/M
3300004480\|Ga0062592_102661826	Not Available	505	Open in IMG/M
3300005293\|Ga0065715_10668465	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Nostocales	652	Open in IMG/M
3300005295\|Ga0065707_10262889	All Organisms → cellular organisms → Bacteria	1092	Open in IMG/M
3300005295\|Ga0065707_10874525	All Organisms → cellular organisms → Bacteria → Acidobacteria	574	Open in IMG/M
3300005328\|Ga0070676_10233429	All Organisms → cellular organisms → Bacteria	1220	Open in IMG/M
3300005332\|Ga0066388_104738943	All Organisms → cellular organisms → Bacteria → Acidobacteria	692	Open in IMG/M
3300005334\|Ga0068869_100826410	All Organisms → cellular organisms → Bacteria	798	Open in IMG/M
3300005356\|Ga0070674_101119147	All Organisms → cellular organisms → Bacteria → Acidobacteria	696	Open in IMG/M
3300005365\|Ga0070688_101000400	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300005437\|Ga0070710_10713037	Not Available	709	Open in IMG/M
3300005440\|Ga0070705_100762895	All Organisms → cellular organisms → Bacteria → Acidobacteria	766	Open in IMG/M
3300005459\|Ga0068867_100295131	Not Available	1334	Open in IMG/M
3300005468\|Ga0070707_101332451	Not Available	684	Open in IMG/M
3300005545\|Ga0070695_101053604	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300005549\|Ga0070704_100661277	All Organisms → cellular organisms → Bacteria	923	Open in IMG/M
3300005549\|Ga0070704_100721820	Not Available	885	Open in IMG/M
3300005564\|Ga0070664_100369064	All Organisms → cellular organisms → Bacteria	1308	Open in IMG/M
3300005577\|Ga0068857_100566864	All Organisms → cellular organisms → Bacteria	1071	Open in IMG/M
3300005577\|Ga0068857_100854324	All Organisms → cellular organisms → Bacteria	871	Open in IMG/M
3300005577\|Ga0068857_102456330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces viridochromogenes	512	Open in IMG/M
3300005578\|Ga0068854_100323206	All Organisms → cellular organisms → Bacteria	1255	Open in IMG/M
3300005578\|Ga0068854_100355780	All Organisms → cellular organisms → Bacteria	1200	Open in IMG/M
3300005616\|Ga0068852_101832762	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300005618\|Ga0068864_100773635	Not Available	942	Open in IMG/M
3300005618\|Ga0068864_101037924	All Organisms → cellular organisms → Bacteria	814	Open in IMG/M
3300005618\|Ga0068864_102659587	Not Available	506	Open in IMG/M
3300005840\|Ga0068870_10485143	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300005840\|Ga0068870_10693239	All Organisms → cellular organisms → Bacteria	702	Open in IMG/M
3300005841\|Ga0068863_101740171	All Organisms → cellular organisms → Bacteria	633	Open in IMG/M
3300005842\|Ga0068858_100915379	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	858	Open in IMG/M
3300005842\|Ga0068858_102044571	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300005844\|Ga0068862_100982622	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300005844\|Ga0068862_102612254	Not Available	517	Open in IMG/M
3300006049\|Ga0075417_10334120	Not Available	740	Open in IMG/M
3300006844\|Ga0075428_100694687	All Organisms → cellular organisms → Bacteria	1084	Open in IMG/M
3300006846\|Ga0075430_101049055	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300006871\|Ga0075434_100178760	All Organisms → cellular organisms → Bacteria	2141	Open in IMG/M
3300006876\|Ga0079217_10148872	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1130	Open in IMG/M
3300006876\|Ga0079217_10180873	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1056	Open in IMG/M
3300006880\|Ga0075429_100304530	Not Available	1395	Open in IMG/M
3300006880\|Ga0075429_101459174	Not Available	595	Open in IMG/M
3300006904\|Ga0075424_101807912	Not Available	646	Open in IMG/M
3300006918\|Ga0079216_12024005	All Organisms → cellular organisms → Bacteria → Acidobacteria	500	Open in IMG/M
3300006969\|Ga0075419_10754389	Not Available	693	Open in IMG/M
3300009011\|Ga0105251_10066496	All Organisms → cellular organisms → Bacteria	1685	Open in IMG/M
3300009094\|Ga0111539_11527800	Not Available	774	Open in IMG/M
3300009100\|Ga0075418_13172827	Not Available	500	Open in IMG/M
3300009101\|Ga0105247_10495666	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	889	Open in IMG/M
3300009147\|Ga0114129_11395257	Not Available	865	Open in IMG/M
3300009147\|Ga0114129_11763583	Not Available	754	Open in IMG/M
3300009147\|Ga0114129_12378959	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300009162\|Ga0075423_10274412	All Organisms → cellular organisms → Bacteria	1767	Open in IMG/M
3300009162\|Ga0075423_11441062	Not Available	738	Open in IMG/M
3300009174\|Ga0105241_12410733	Not Available	525	Open in IMG/M
3300009176\|Ga0105242_11492260	Not Available	706	Open in IMG/M
3300009176\|Ga0105242_12973514	All Organisms → cellular organisms → Bacteria → Acidobacteria	524	Open in IMG/M
3300010038\|Ga0126315_10858403	All Organisms → cellular organisms → Bacteria → Proteobacteria	601	Open in IMG/M
3300010359\|Ga0126376_10000101	All Organisms → cellular organisms → Bacteria	35236	Open in IMG/M
3300010373\|Ga0134128_10784617	All Organisms → cellular organisms → Bacteria	1056	Open in IMG/M
3300010396\|Ga0134126_12922000	Not Available	517	Open in IMG/M
3300010397\|Ga0134124_10583138	Not Available	1093	Open in IMG/M
3300010397\|Ga0134124_11194268	All Organisms → cellular organisms → Bacteria → Acidobacteria	780	Open in IMG/M
3300010399\|Ga0134127_10303412	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1539	Open in IMG/M
3300010400\|Ga0134122_11584638	Not Available	678	Open in IMG/M
3300010403\|Ga0134123_11117254	All Organisms → cellular organisms → Bacteria	813	Open in IMG/M
3300011333\|Ga0127502_11202730	All Organisms → cellular organisms → Bacteria → Acidobacteria	718	Open in IMG/M
3300012961\|Ga0164302_11550557	Not Available	548	Open in IMG/M
3300012989\|Ga0164305_11820273	Not Available	550	Open in IMG/M
3300013100\|Ga0157373_10680044	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	753	Open in IMG/M
3300013297\|Ga0157378_13231359	Not Available	506	Open in IMG/M
3300013306\|Ga0163162_12074717	All Organisms → cellular organisms → Bacteria → Acidobacteria	652	Open in IMG/M
3300013307\|Ga0157372_12914030	Not Available	548	Open in IMG/M
3300015371\|Ga0132258_12946451	Not Available	1181	Open in IMG/M
3300015372\|Ga0132256_102278972	Not Available	645	Open in IMG/M
3300021445\|Ga0182009_10053028	All Organisms → cellular organisms → Bacteria	1722	Open in IMG/M
3300025898\|Ga0207692_10643163	Not Available	685	Open in IMG/M
3300025900\|Ga0207710_10554925	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300025907\|Ga0207645_10999440	Not Available	566	Open in IMG/M
3300025908\|Ga0207643_10611333	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	702	Open in IMG/M
3300025911\|Ga0207654_10794983	All Organisms → cellular organisms → Bacteria	683	Open in IMG/M
3300025911\|Ga0207654_11033458	Not Available	598	Open in IMG/M
3300025922\|Ga0207646_10359640	All Organisms → cellular organisms → Bacteria	1315	Open in IMG/M
3300025922\|Ga0207646_11924866	Not Available	503	Open in IMG/M
3300025925\|Ga0207650_11790795	Not Available	520	Open in IMG/M
3300025926\|Ga0207659_10998674	All Organisms → cellular organisms → Bacteria → Acidobacteria	720	Open in IMG/M
3300025934\|Ga0207686_11713442	Not Available	520	Open in IMG/M
3300025937\|Ga0207669_10732297	All Organisms → cellular organisms → Bacteria → Acidobacteria	815	Open in IMG/M
3300025941\|Ga0207711_10103578	All Organisms → cellular organisms → Bacteria → Acidobacteria	2520	Open in IMG/M
3300025945\|Ga0207679_10609357	All Organisms → cellular organisms → Bacteria → Acidobacteria	985	Open in IMG/M
3300025945\|Ga0207679_10881935	Not Available	818	Open in IMG/M
3300025961\|Ga0207712_10782636	Not Available	838	Open in IMG/M
3300026116\|Ga0207674_10116872	All Organisms → cellular organisms → Bacteria	2638	Open in IMG/M
3300026116\|Ga0207674_10601853	All Organisms → cellular organisms → Bacteria	1062	Open in IMG/M
3300026121\|Ga0207683_10993633	All Organisms → cellular organisms → Bacteria → Acidobacteria	779	Open in IMG/M
3300027639\|Ga0209387_1038075	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1014	Open in IMG/M
3300027886\|Ga0209486_10828652	All Organisms → cellular organisms → Bacteria → Acidobacteria	608	Open in IMG/M
3300027909\|Ga0209382_10126136	All Organisms → cellular organisms → Bacteria → Proteobacteria	2982	Open in IMG/M
3300031547\|Ga0310887_10195663	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1095	Open in IMG/M
3300031548\|Ga0307408_101367140	All Organisms → cellular organisms → Bacteria → Acidobacteria	666	Open in IMG/M
3300031911\|Ga0307412_12039809	Not Available	532	Open in IMG/M
3300031913\|Ga0310891_10356794	All Organisms → cellular organisms → Bacteria → Acidobacteria	525	Open in IMG/M
3300031943\|Ga0310885_10058490	All Organisms → cellular organisms → Bacteria	1628	Open in IMG/M
3300032003\|Ga0310897_10405699	All Organisms → cellular organisms → Bacteria → Acidobacteria	645	Open in IMG/M
3300032013\|Ga0310906_10535685	Not Available	798	Open in IMG/M
3300032157\|Ga0315912_10016532	All Organisms → cellular organisms → Bacteria	6101	Open in IMG/M
3300033412\|Ga0310810_10150268	All Organisms → cellular organisms → Bacteria	2706	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	56.00%
Environmental	Environmental	43.20%
Engineered	Engineered	0.80%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	56.00%
Terrestrial	Environmental → Terrestrial	41.60%
Aquatic	Environmental → Aquatic	1.60%
Solid Waste	Engineered → Solid Waste	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	41.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere	33.60%
Rhizoplane	Host-Associated → Plants → Rhizoplane	22.40%
Freshwater	Environmental → Aquatic → Freshwater	0.80%
Marine	Environmental → Aquatic → Marine	0.80%
Grass	Engineered → Solid Waste → Grass	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	25.60%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	19.20%
Loam	Environmental → Terrestrial → Soil → Loam	9.60%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.00%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.40%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.80%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.80%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.80%
Composting	Engineered → Solid Waste → Grass → Composting	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	25.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	19.20%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	13.60%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	11.20%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.00%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.40%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.80%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.80%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.80%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	12.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.20%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	7.20%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	6.40%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	5.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	4.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	4.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	4.00%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.20%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.40%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.40%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.60%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	1.60%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.60%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.60%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.80%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.80%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.80%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.80%
Quercus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Quercus Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.80%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.80%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459017	Litter degradation ZMR4	Engineered	Open in IMG/M
3300000532	Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNA_Illumina_Assembled	Host-Associated	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300003203	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2	Host-Associated	Open in IMG/M
3300003267	Sugarcane bulk soil Sample L1	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300003993	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_CattailC_D2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004480	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006876	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200	Environmental	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006918	Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS100	Environmental	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010038	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011333	Cornfield soil microbial communities from Stanford, California, USA - CI-CA-CRN metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013100	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300021445	Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaG	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026116	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027639	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control (SPAdes)	Environmental	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300030496	Bulk soil microbial communities from Mexico - Penjamo (Pe) metaG (v2)	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031911	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1	Host-Associated	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
4ZMR_02309450	2170459017	Switchgrass, Maize And Mischanthus Litter	ERTHNRRLDARAFDCLKITGNRAVMSGVIVESNVLTAIGLRVLLVVEDNGEGIDAPANDRLTWGVYQNPAAGWTPKDAERDDDIGASLSWLATDAERSDDAGIPSNQSKIVGCQSFPLSSYSFVDIAHGGGNVQVQP
CNAas_10120011	3300000532	Quercus Rhizosphere	LEFNAREQNKGTVAGEMTFSDPTVIPVGDPDAGNSGTPGALVRAKFDCLKITGNRAVMSGEIFDSNILNAIGLRVLLVVEDNGEGINSPATDKLTWGIYQLAGGTWVPKDAERDDDNGAGLSWLATDFERPDDLGIPSNPGKVVGCQSFSLSAYSFVDIAHGGGNVQVQP*
JGI11643J12802_116580571	3300000890	Soil	QITGNRAVMSGIISQSSIAAAIGLRVLLVVEDNGEGVNIATPDKLTWGVYQPATGNWIPKDAERDDDIGATLTWIAKDAERDDDVGVPSNQSKVIGCQSFPLSSYSFVDIKHGGGNVQVQP*
JGI11615J12901_104563251	3300000953	Soil	TVGEMTFVDPSVVPVPDPDNPSTINNAGAFITAKFDCLQITGNRAVMSGLISESNIAAALGLRVLLVVEDNGEGVNIPTPDKLTWGVYQPAGGNWIPTDAERDDDNGASLSWIARDAERDDDVGVPSNQSKAIGCQRFPLSSYSFVDIKHGGGNVQVQP*
JGI1027J12803_1009005512	3300000955	Soil	IGGVISSSNVLTAIGRRILLVLEDNGEGINQPAPDRLTWGIYETPENGWIPKDSERDDDNGASLSWLAKDFERPDDAGIPSKKDPLVGCQSFPLSSYSFVDVGHGNGNIQVRP*
JGI1027J12803_1013922063	3300000955	Soil	IGGVISSSNVLTAIGRRMLLVLEDNGEGINQPALDRLTWGIYETPESGWTPKDSERDDDIGASLSWLATDLERPENVGIPSKKDPLVGCQSFPLSSYSFVDVGHGNGNIQVRP*
F14TB_1063516411	3300001431	Soil	ATPDDATTPGVQIAATFDCVKVQGNRAVMGGVISSSNILGAIDRRVLLVVEDNGEGVNASAPDRLTWGIYENPTTGWTPKDFERDDDNGANLTWLATDFERPDDPGIPSNQSKIVRCDSFPLSTYSFVDVDHGNGNIQVKPN*
JGI25406J46586_101475921	3300003203	Tabebuia Heterophylla Rhizosphere	ILSAIGLRVLLVVEDNGEGVNALTDKLTWGIYTPQGTGWTPKDSEREDDNGASLIWLAKDFERPEDLGIPSNPSKIVGCESFSLGAYSFVDIAHGGGNVQVSP*
soilL1_100350294	3300003267	Sugarcane Root And Bulk Soil	MSGVISQSNILSAVGLRILLVVEDNGEGINAASTDKLTWGIYQPSGGAWTPRDAERDDDNGAELRWLATDFERPDDAGVPSNQSKIVGCQSFSLAAYSF
soilL2_100418248	3300003319	Sugarcane Root And Bulk Soil	AVMSGVISQSNIFSAVGLRILLVVEDNGEGINAASTDKLTWGIYQPSGGAWTPKDAERDDDNGAGLSWLAKDFERPDDVGVPSNQSKVVGCQSFSLAAYSFVDVAHGGGNIQVQP*
Ga0055468_100356721	3300003993	Natural And Restored Wetlands	VEDNGEGINIPTLDKLTWGIYQNVPTGWVPKDAERDDDIGATLTWIATDAERPDDVGVPSNQSKVVGCGSFPLSSYSFVDIAHGGGNVQVQP*
Ga0062593_1019667511	3300004114	Soil	MTFSDPNVVAVAEPDATPGPNNAGAIVQAKFDCLKISGNRAVMSGVISQSNILSAVGLRILLVVEDNGEGINAASTDQLTWGIYQPSGGVWTPRDAERDDDNGASLSWLATDFERPDDAGVRSNQNKVIGCQSFSLAAYSFVDVAHGGGNIQVQP*
Ga0062590_1003543842	3300004157	Soil	YLQFNAREEGNNLGSMTYSDPFTTPEGATVSGVQMTVTFDCVKVEGNRAVMGGVITSSNILAAIDNRALLVVEDNGEGIDAPTPDRLTWGVYLNATKNWTPKDSEREDDNGASLIWTATDLERPDLPGIPSNQSSTVRCDSFPLSSYSFVDVVHGNGNIQVRPRN*
Ga0062590_1008526101	3300004157	Soil	AITNPGALVRAKFDCLKITENRAVMSGVIFESNVAASIGLRVLLVVEDNGEGIGVPTADKLTWGVYQNPTANWTPKDAERDDDNGASLTWIVKDAERPDDLGVPSSNQSKIVGCTSFPLSSYSFVDVKHGGGNIQVQP*
Ga0062590_1011454212	3300004157	Soil	PDASGTESAPGASMRAQFDCLKIAENRAVMSGVIVESNLLTAIGLRVLLVVEDNTEGINQPTADKLTWGVYQNPAAGWTPKDAERDDDNGASLTWLATDAERSDDPGIPSNPSKLVGCQSFPLSSYSFVNIAHGGGNVQVKP*
Ga0062595_1009431482	3300004479	Soil	DPDATPGPNNAGAIVQAKFDCLKITGNRAVMSGVISQSNILSAVGLRILLVVEDNGEGINAASTDKLTWGIYQPSGVAWVPKDAEREDDNGAGLSWLATDFERTDDAGVPSNQSKVIGCQSFSLAAYSFVEVAHGGGNIQVQP*
Ga0062592_1009043241	3300004480	Soil	GIISESNIAAALGLRVLLVVEDNGEGVDIPTPDKLTWGVYQNATQNWIPKDAERDDDNGATLTWIAKDAERPDDVGVPSNQSKVIGCQSFPLSSYSFVDVKHGGGNIQVQP*
Ga0062592_1026618261	3300004480	Soil	IQNNGSTVGDMTFSDPAAIPVPDPDNSTALNSPGALVKASLDCLKITGNRAVMGGVITESNVGAAVGFRILLVVEDNGEGIDAPGLDKLTWGVYRNTTPGWVPKDAERDDDNGASLTWIAKDAERPDDAGIPSNQPTTVGCTSFPISAYSFVDISHGGGNIQVKP*
Ga0065715_106684652	3300005293	Miscanthus Rhizosphere	TGNRAVMSGVIVESNVLTAIGLRVLLVVEDNGEGIDAPANDRLTWGVYQNPAAGWTPKDAERDDDIGASLSWLATDAERSDDAGIPSNQSKIVGCQSFPLSSYSFVDIAHGGGNVQVQP*
Ga0065707_102628892	3300005295	Switchgrass Rhizosphere	PGVQITATFDCVKVQGNRAVMGGVISSSNILGAIDRRVLLVVEDNGEGVNASAPDRLTWGIYENPTTGWTPKDFERDDDNGAILTWLATDFERPDDPGIPSNQSKIVRCDSFPLSTYSFVDVDHGNGNIQVRPN*
Ga0065707_108745252	3300005295	Switchgrass Rhizosphere	ATPVADPDDSTAITSPGALLRAKFDCLKITDNRAVMSGVIFESNVASSVGLRVLLVVEDNGEGVGVDSPDKLTWGVYQNPNANWTAKDAERDDDNGANLTWIARDAERDDDPGVPSNQSKIVGCQSFPLSSYSFLDIKHGGGNIQVQP*
Ga0070676_102334293	3300005328	Miscanthus Rhizosphere	GVISESNILNAIGLRVLLVVEDNGEGVNALTDKLTWGIYTPQGTGWTPKDAERDDDNGASLKWLATDFERTDDIGIPSNPSKMVGCESFSLSAYSFVDVAHGGGNIQVSP*
Ga0066388_1047389432	3300005332	Tropical Forest Soil	EDNGEGVNVPTPDKLTWGVYQPTSTNWIPKDAERDDDNGASLVWIVKDAERPDDPGVPSNQSKAIGRNSFPLSSYSFVDIKHGGGNIQVQP*
Ga0068869_1008264102	3300005334	Miscanthus Rhizosphere	AIGLRVLLVVEDNGEGVNALTDKLTWGIYTPQGTGWTPKDAERDDDNGASLKWLATDFERTDDIGIPSNPSKMVGCESFSLSAYSFVDVAHGGGNIQVSP*
Ga0070674_1011191471	3300005356	Miscanthus Rhizosphere	VLLVVEDNGEGVNVPTPDKLTWGVYQSSSANWIPKDAERDDDNGASLTWIARDAEREDDPGVPSNQSKTIGCQSFPLSSYSFVDIKHGGGNVQVQP*
Ga0070688_1010004001	3300005365	Switchgrass Rhizosphere	PGAVMTAKFDCLQITGNRAVMSGLVSESNIAAALGLRVLLVVEDNGEGVNVPTPDKLTWGVYQSSSANWIPKDAERDDDNGASLTWIARDAAREDDPGVPSNQSKTIGCQSFPLSSYSFVDIKHGGGNVQVQP*
Ga0070710_107130371	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	TDPNATVVIDPDAPPSTNGPQPGASVRATFDCLKISGNRAVMSGVIVESNVLTAIGLRVLLVVEDNGEGVNAPANDRLTWGVYQNPATGWTPKDSERDDDIGATLSWLATDAERPDDAGIPSNQSRIVGCQSFPLSSYSFVDIAHGGGNVQVQP*
Ga0070705_1007628952	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MTFSDQAAVPVIDPDNSTEITSPGAVMTAKFDCLQITGNRAVMSGLVSESNVAAALGLRVLLVVEDNGEGVNVPTPDKLTWGVYQSSSANWIPKDAERDDDNGASLTWIARDAEREDDPGVPSNQSKTIGCQSFPLSSYSFVDIKHGGGNVQVQP*
Ga0068867_1002951311	3300005459	Miscanthus Rhizosphere	QFDAREEGNNHGSLTYSDPSTIPEGATVPGVQMTVTFDCVKVQGNRAVMGGVITSSNILAAISNRALLVVEDNGEGIDAPAPDRLTWGVYLNVTKDWTPKDSEREDDNGASLTWIATDAERPELPGIPSNQSTTVRCDSFPLSSYAFVDVAHGNGNIQVKPKN*
Ga0070707_1013324512	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	ESNFFSAIGLRVLLVVEDNGEGINSASTDKLTWGIYQPSGGAWSPKDAERDDDNGAALSWLATDFERPDDVGVPSNQSKVVGCQSFGLAAYSLVDVAHGGGNIQVKP*
Ga0070695_1010536042	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	FTDPNATLVVDPDAPPSPNGPTTGASMRASFDCLKITGNRAVMSGVIVESNVLTAIGLRVLLVVEDNGEGIDAPAHDRLTWGVYQNPAAGWTPKDAERDDDIGASLSWLATDAERSDDAGIPSNQSRTIGCQSFPLSSYSFVDIAHGGGNVQVQP*
Ga0070704_1006612771	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	GAVMTAKFDCLQITGNRAVMSGIISESNIAAAIGLRVLLVVEDNGEGVNTSTPDKLTWGVYQPAGGNWIPKDAERDDDNGASLTWIARDAEREDDPGVPSNQSKVIGCQSFPLSSYSFVDVKHGGGNIQVQP*
Ga0070704_1007218201	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	GVQMTVTFDCVKVQGNRAVMGGVITSSNILAAINNRALLVVEDNGEGIDAPAPDRLTWGVYLNVTKDWTPKDSEREDDNGASLTWIATDAERPELPGIPSNQSTTVRCDSFPLSSYAFVDVAHGNGNIQVKPKN*
Ga0070664_1003690642	3300005564	Corn Rhizosphere	TAINSPGAVMTAKFDCLQIEGNRAVMSGVISESNIANALGLRVLLVVEDNGEGVNIPTPDKLTWGVYQSSNTSWTPKDAERDDDNGASLKWIAKDAEREDDPGVPSNQSNEIGCKSFPLSSYSFVDIKHGGGNVQVQP*
Ga0068857_1005668642	3300005577	Corn Rhizosphere	MTAKFDCLQIEGNRAVMSGVISESNIANALGLRVLLVVEDNGEGVNIPTPDKLTWGVYQSSNTSWTPKDAERDDDNGASLKWIAKDAEREDDPGVPSNQSNEIGCKSFPLSSYSFVDIKHGGGNVQVQP*
Ga0068857_1008543242	3300005577	Corn Rhizosphere	INNAGAFITAKFDCLQITGNRAVMSGLISESNIAAALGLRVLLVVEDNGEGVNIPTPDKLTWGVYQPAGGNWIPTDAERDDDNGASLSWIARDAERDDDVGVPSNQSKAIGCQRFPLSSYSFVDIKHGGGNVQVQP*
Ga0068857_1024563301	3300005577	Corn Rhizosphere	VVPVGDPDASEGSGTPGALVRAKFDCLKITGNRAVMSGVISESNILNAVGLRVLLVVEDNGEGVNALTDKLTWGIYTPQGSGWTPKDAERDDDNGASLNWIARDFERDDDTGISSNQSKIVGCQSFSLGAYSFVDITHGGGNVQVQP*
Ga0068854_1003232063	3300005578	Corn Rhizosphere	AVEDPDATPGPNNAGAIVEAKFDCLKITGNRAVMSGVISQSNILSAVGLRVLLVVEDNGEGIDAPSTDKLTWGIYQPSGGAWTPKDAERDDDNGAGLSWLATDFERTDDVGVASNSSKVVGCQSFSLAAYSLVDVAHGGGNIQVQP*
Ga0068854_1003557801	3300005578	Corn Rhizosphere	GEGVNALTDKLTWGIYTQQGTGWTPKDSERDDDNGASLKWLATDFERTDDIGIPSNPSKIVGCESFSLSAYAFVDIAHGGGNVQVSP*
Ga0068852_1018327622	3300005616	Corn Rhizosphere	SESNILNAIGLRILLVVEDNGEGVNAVTDKLTWGIYTPQGTGWTPRDAERDDDNGASLSWLAKDFERPDDLGIPSNQSKIVGCESFSLGAYSFVDITHGGGNVQVQP*
Ga0068859_1031824701	3300005617	Switchgrass Rhizosphere	ALTDKLTWGIYTPQGTGWTPKDAERDDDNGSSLKWLATDFERTDDNGIPSNQSKIVGCESFSLAAYSFVDVAHGGGNIQVLP*
Ga0068864_1007736352	3300005618	Switchgrass Rhizosphere	MGGVITSSNILAAIDNRALLVVEDNGEGINSPARDRLTWGIYLNATRDWTPRDSERDDDNGASLTWIATDLERPDLPGIPSNQSTTVRCDSFPLSSYSFVDVVHGNGNIQVKPRN*
Ga0068864_1010379241	3300005618	Switchgrass Rhizosphere	KGTVVGEMTFSDPSVVPVGDPDGSDGPGTAGALIKAKFDCLNITGNRAVMSGVISESNILNAIGLRVLLVVEDNGEGVNALNDKLTWGIYTSQSTNWTPKDSEREDDNGASLSWIAKDFERDDDVGVPSNQSKTVGCQSFSLAAYSFVDIKHGGGNIQVQP*
Ga0068864_1026595872	3300005618	Switchgrass Rhizosphere	FDCLKITGNRAVMSGVISQSNLLSAVGLRILLVVEDNGEGINAATTDKLTWGIYQPSGGAWTPKDAERDDDNGAGLSWLATDFERTDDIGVPSNQSKIVGCQSFNLAAYSLVDVAHGGGNIQVQP*
Ga0068870_104851431	3300005840	Miscanthus Rhizosphere	FNAREQNKGTVVGEMTFSDPSAVPVGDPDATGNSSTPGALVRAKFDCLKITDNRAVMSGVIFDSNILNAVGLRVLLVVEDNGEGVNAVNDKLTWGVYTSQATGWIPKDSERDDDNGSSLVWLAKDFERPEDLGIPSNPSKIVGCESFSLAAYSFVDVVHGGGNIQVQP*
Ga0068870_106932391	3300005840	Miscanthus Rhizosphere	FNAREQNKGTVVGDMTFSDPAVIPIDDADATGGTNTAGAMVRATFDCLKITSNRAVMSGVISESNILSAVGLRILLVVEDNGEGVNAANPDKLTWGVYQPTATGWVPKDFERDDDNGASLSWLATDFERPDDPGIPSRLDKTVGCQSFALGAYTLVDVAQGGGNIQVQP*
Ga0068863_1017401712	3300005841	Switchgrass Rhizosphere	AAVPVPDPDDTTAINSPGAVMTAKFDCLQIEGNRAVMSGVISESNIANALGLRVLLVVEDNGEGVNVPTPDKLTWGVYQSSNTNWTPKDAERDDDNGASLKWIAKDAEREDDPGVPSNQSKEIGCKSFPLSSYSFVDIKHGGGNVQVQP*
Ga0068858_1009153792	3300005842	Switchgrass Rhizosphere	LLVVEDNGEGINAASTDKLTWGIYQPSGGAWVPKDAEREDDNGAGLSWLATDFERPDDVGVPFNQSKVIGCQTVSLSAYSFVDVPHGGGNIQVQP*
Ga0068858_1020445712	3300005842	Switchgrass Rhizosphere	SAVGLRVLLVVEDNGEGVNAANDKLTWGIYQPPASGWVPQDAERNDDNGASLKWIATDFERPDDAGVPSNQSKLIGCQSFSLASYSFVDVKHGGGNIQVQP*
Ga0068862_1009826221	3300005844	Switchgrass Rhizosphere	AVMSGVISESNILSAVGLRILLVVEDNGEGVNAANPDKLTWGVYQPTATGWVPKDFERDDDNGASLSWLATDFERPDDPGIPSRLDKTVGCQSFALGAYTLVDVAQGGGNIQVQP*
Ga0068862_1026122541	3300005844	Switchgrass Rhizosphere	QNNGRTVGEMTFTDPNASPSGDPDAPNAPNAPATGVSMRASFDCLRIDGNRAVMSGAIVESNILTAIGLRVLLVVEDNGEGVDVPTPDKLTWGVYQSSANTWIPKDAERDDDNGALLTWIATDAERPDDVGVPSNPSKVIGCQSFPLSSYSFVDIKHGGGNVQVQP*
Ga0075417_103341201	3300006049	Populus Rhizosphere	VVEDNGEGVNTSTPDKLTWGVYQPAGGNWIPKDAERDDDNGASLTWIARDAEREDDPGVPSNQSKVIGCQSFPLSSYSFVDVKHGGGNIQVQP*
Ga0075428_1006946872	3300006844	Populus Rhizosphere	FNARVQNNGRTVGEMTFSDQAAVPVPDPDDSTAINSPGAVMTAKFDCLQLEGNRAVMSGVISESNIAAALGLRVLLVVEDNGEGVNIPTPDKLTWGVYQSANANWTPKDAERDDDNGASLKWIAKDAERDDDVGVPSDKSKTIGCQSFPLSSYSFVDIKHGGGNVQVQP*
Ga0075430_1010490552	3300006846	Populus Rhizosphere	NTVGEMTFSDPAVVPVGDPDASEGPSTPGALVRANFDCLKIDGNKAVMSGVISESNILAAVGLRILLVVEDNGEGVNAANDKLTWGIYQPPASGWVPQDAERDDDNGAGLKWIATDFERPGEPGVPSDQSKIVGCQTFSLAAYNFTDVKHGGGNIQVQP*
Ga0075434_1001787601	3300006871	Populus Rhizosphere	DADATGGTNTAGAMVRATFDCLKITGNRAVMSGVISESNILSAVGLRILLVVEDNGEGVNAANPDKLTWGVYQPTATGWVPKDFERDDDNGASLSWLATDFERPDDPGIPSRLDKTVGCQSFALGAYTLVDVAQGGGNIQVQP*
Ga0079217_101488721	3300006876	Agricultural Soil	IAAAIGLRVLLVVQDAGEGVNIPNADKLTWGVYQPATGNWIPKDAERDDDNGATLTWIAKDAERDDDVGVPSNQSKAPIGCQSFPLSSYSFVDVKHGGGNIQVQP*
Ga0079217_101808731	3300006876	Agricultural Soil	GLRVLLVVEDNGEGVNIPATDKLTWGVYQSSATAWVPKDAERDDDEGALLTWIATDAERSDDVGVPSNPSKVIGCQSFPLSAYAFADIKHGGGNVQVQP*
Ga0075429_1003045302	3300006880	Populus Rhizosphere	AIPDGATTPGVQLTATFDCVKVQGNRAVMGGVITSSNVLSAIDRRILLVVEDNGEGINAPAPDRLTWGVYENAVSGWTPKDAERDDDNGAFLSWLATDFERPDDPGFPSNRSNIVRCDSFPLSSYSFVDVGHGNGNIQVKPN*
Ga0075429_1014591741	3300006880	Populus Rhizosphere	AVMGGAISSSNILAAIGHRVLLVVEDNGEGVGTIAPDRLTWGIYNLPATGWTPKDSERDDDNGASLRWIATDFERPEDLGIPSHSSGIVGCQSFSLSSYAFVDVEHGGGNIQIRP*
Ga0075424_1018079121	3300006904	Populus Rhizosphere	SNVLTAIGLRVLLVVEDNGEGLNAPANDRLTWGVYQNPATGWTPKDSERDDDNGASLSWLATDAERLDDAGVPSNQSRIIGCQSFPLSSYSFVDIAHGGGNVQVQP*
Ga0079216_120240051	3300006918	Agricultural Soil	PTPDKLTWGVYQPSTGNWIPKDAERDDDIGATLTWIARDFERDDDVGVPSNQSKVIGCQSFPLSSYSFVDIKHGGGNVQVQP*
Ga0075419_107543891	3300006969	Populus Rhizosphere	PGVQMTATFDCAKVEGNRAVMGGVITSSNILAAINSRVLLVVEDNGEGVNAPAPDRLTWGVYDNSVPGWTPKDAERDDDNGAMLKWLATDFERPDDPGVPSDKAKTVRCDTFPLSSYSFVEVEHGNGNIQVRPN*
Ga0105251_100664961	3300009011	Switchgrass Rhizosphere	RAVMSGVISESNILNAIGLRVLLVVEDNGEGVNALTDKLTWGIYTPQGTGWTPKDAERDDDNGASLKWLATDFERTDDNGIPSNQSKIVGCESFSLAAYSFVDVAHGGGNIQVSP*
Ga0111539_115278002	3300009094	Populus Rhizosphere	ESNILAAVGLRILLVVEDNGEGVNAANDKLTWGIYQPPTSGWVPQDAERDDDNGAGLKWIATDFERPGEPGIPSDQSKIIGCQTFSLAAYNFTDVKHGGGNIQVQP*
Ga0075418_131728272	3300009100	Populus Rhizosphere	VVEDNGEGINAPAPDRLTWGVYLNVTRDWTPKDSEREDDNGASLTWIATDAERPDLPGIPSNQSTTVRCDSFPLSSYAFVDVAHGNGNIQVKPTN*
Ga0105247_104956662	3300009101	Switchgrass Rhizosphere	LEFNAREQNKGTVVGDMTFSDPAVIPIDDADATGGTNTAGAIVRATFDCLKITGNRAVMSGVISESNILSAVGLRILLVVEDNGEGVNAANPDKLTWGVYQPTATGWVPKDFERDDDNGASLSWLATDFERPDDPGIPSRLDKTVGCQSFALGAYTLVDVAQGGGNIQVQP*
Ga0114129_113952571	3300009147	Populus Rhizosphere	VGDPDASEGPSTPGALVRANFDCLKIDGNKAVMSGVISESNILAAVGLRILLVVEDNGEGVNAANDKLTWGIYQPPASGWVPQDAERDDDNGAGLKWIATDFERPGEPGVPSDQSKIVGCQTFSLAAYNFTDVKHGGGNIQVQP*
Ga0114129_117635832	3300009147	Populus Rhizosphere	EGDNHGSMTFSDPTLTPEDATTPGVQMTATFDCAKVEGNRAVMGGVITSSNILAAINSRVLLVVEDNGEGVNAPAPDRLTWGVYDNSVPGWTPKDAERDDDNGAMLKWLATDFERPDDPGVPSDKAKTVRCDTFPLSSYSFVEVEHGNGNIQVRPN*
Ga0114129_123789592	3300009147	Populus Rhizosphere	TFDCVKVDGNRAVMGGVITSSNILAAIDNRALLVVEDNGEGIDAPVPDRLTWGVYLNTTRDWTPKDSEREDDNGASLTWIATDLERPDLPGIPSNQSTTVRCDSFPLSSYAFVDVVHGNGNIQVKPRN*
Ga0075423_102744123	3300009162	Populus Rhizosphere	VGEMTFSDPSVVPVSDPDTSEGAGTPGAFVQAKFDCLKVTGNRAVMSGVISESNILSAIGLRVLVVVEDNGEGVNALTDKLTWGIYTPQGTGWTPKDSERDDDNGASLSWLARDFERPDDVGVPSNQSKIVGCESFSLGAYSFVDIAHGGGNVQVSP*
Ga0075423_114410622	3300009162	Populus Rhizosphere	GVISESNILSVVGLRVLLVVEDNGEGVNALNDKLTWGVYSSQATSWIPKDAERDDDIGASLSWIAKDFERPEDIGIPSNPSKVVGCESFSLGAYSFVDVAHGGGNIQVQP*
Ga0105241_124107331	3300009174	Corn Rhizosphere	EDNGEGINAAGTDKLTWGIYQPSGGAWTPKDAEREDDNGAGLSWLATDFERTDDAGVPSNQIKAVGCQSFSLAAYSFVDVAHGGGNIQVQP*
Ga0105242_114922601	3300009176	Miscanthus Rhizosphere	INAASTDKLTWGIYQPSGGAWTPKDAERDDDNGAGLSWLASDFERIEDVGIPSNQSKVVGCQSFSLAAYSLVDVAHGGGNIQVQP*
Ga0105242_129735141	3300009176	Miscanthus Rhizosphere	VLLVVEDNGEGVNIATPDKLTWGVYQPANGNWIAKDAERDDDNGASLTWIAKDAERDDDPGVPSNQSKVIGCQSFPLSSYSFVNIKHGGGNIQVQP*
Ga0126315_108584031	3300010038	Serpentine Soil	LVRANFDCLQITGNRAVMSGVISESNIVSAVGLRVLLVVEDNGEGVNAASDKLTWGIYQPPASGWVPQDAERDDDNGASLKWIATDFERPDDAGIPSNPSKIIGCQSFSLASYSFVDVKHGGGNIQVQP*
Ga0126376_1000010111	3300010359	Tropical Forest Soil	VWIVNAANDKLTWGIFQPPASGWVPQDSERDDDNGAGLKWIATDFERPDDQGIPSNQSKIIGCQSFSLASFDFTEVKHGGGNIQVQP*
Ga0134128_107846172	3300010373	Terrestrial Soil	REQNKGTVVGEMTFSDPSVVPISDPDATQGSSTAGALVRAKFDCLKITGNRAVMSGVISESNILNAIGLRVLLVVEDNGEGVNALTDKLTWGIYTPQGTGWTPKDAERDDDNGASLKWLATDFERTDDNGIPSNQSKIVGCESFSLAAYSFVDVAHGGGNIQVSP*
Ga0134126_129220001	3300010396	Terrestrial Soil	ITGNRAVMGGVISQSNILSAVGLRILLVVEDNGEGINAANTDKLTWGIYQPSGGAWTPKDAERDDDNGAGLSWLATDFERTDDAGVPSNQSKTVGCQSFNLAAYSLVDVTHGGGNIQVQP
Ga0134124_105831381	3300010397	Terrestrial Soil	DPDSSDGSGTPGALVRASFDCLRITGNRAVMSGVISESNILSAVGLRVLLVVEDNGEGVNASNDKLTWGIFQPPANGWVPKDAERDDDNGAGLKWIATDFERSDDPGVPSDQSKIVGCQSFSLASFDFTEVKHGGGNIQVQP*
Ga0134124_111942682	3300010397	Terrestrial Soil	RTLGRMTLSDQAAVTVRDPDDTTAINRTGAVMTAKFDCLQIEGNRAVMSGVISESNIANALGLRVLLVVEDNGEGVNIPTPDKLTWGVYQSSNTNWTPKDAERDDDNGASLKWIAKDAEREDDPGVPSNQSKEIGCKSFPLSSYSFVDIKHGGGNVQVQP*
Ga0134127_103034122	3300010399	Terrestrial Soil	DPDDPSGIADTGAVVTAKFDCLQITGNRAVMSGIISQSSIAAAIGLRVLLVVEDNGEGVNIATPDKLTWGVYQPSAGNWIPKDAERDDDIGATLTWIAKDAERDDDLGVPSNQSKVIGCQSFPLSSYSFVDIKHGGGNVQVQP*
Ga0134122_115846381	3300010400	Terrestrial Soil	GVIVESNVLTAIGLRVLLVVEDNGEGIDAPAHDRLTWGVYQNPAAGWTPKDAERDDDIGASLSWLATDAERSDDAGIPSNQNRTIGCQSFPLSSYSFVDIAHGGGNVQVRP*
Ga0134123_111172541	3300010403	Terrestrial Soil	NGEGVNALTDKLTWGIYTPQGTGWTPKDAERDDDNGASLKWLATDFERTDDNGIPSNQSKIVGCESFSLAAYSFVDVAHGGGNIQVSP*
Ga0127502_112027302	3300011333	Soil	LLVVEDNGEGVNIPSTDKLTWGVYQSSATSWIPKDAERDDDNGSSLTWLATDAERADDVGVPSSQSKVIGCQSFPLDAYTFADIKHGGGNVQVQP*
Ga0164302_115505571	3300012961	Soil	IVESNVLTAIGLRVLLVVEDNGEGVNAPSNDRLTWGVYQNPSTGWTPKDSERDDDIGATLSWLATDAERPDDAGVPSNQSRIVGCQSFPLSSYSFVDIAHGGGNVQVQP*
Ga0164305_118202731	3300012989	Soil	PDAPPSTNGPQPGASIRATFDCSKISGNRAVMSGVIVESNVLTAIGLRVLLVVEDNGEGVNAPANDRLTWGVYQNPATGWTPKDSERDDDIGATLSWLATDAERPDDAGIPSNQSRIVGCQSFPLSSYSFVDIAHGGGNVQVQP*
Ga0157373_106800441	3300013100	Corn Rhizosphere	DNGEGVNVPTPDKLTWGVYQSSSANWIPKDAERDDDNGASLTWIVRDAEREDDPGVPSNQSKTIGCQSFPLSSYSFVDIKHGGGNVQVQP*
Ga0157378_132313591	3300013297	Miscanthus Rhizosphere	AAVPVPDPDNPTAINSPGTLMTAKFDCLQITGNQAVMSGVISESNVAAALGLRVLLVVEDNGEGVNIATPDKLTWGVYQPANGNWIAKDAERDDDTGASLTWIAKDAERDDDPGVPSNQSKVIGCQSFPLSSYSFVNIKHGGGNIQVQP*
Ga0163162_120747171	3300013306	Switchgrass Rhizosphere	ARVQNNGRTVGQMTFSDQAAVPVIDPDNSTEITSPGAVMTAKFDCLQITGNRAVMSGLVSESNVAAALGLRVLLVVEDNGEGVNVPTPDKLTWGVYQSSSANWIPKDAERDDDNGASLTWIARDAEREDDPGVPSNQSKTIGCQSFPLSSYSFVDIKHGGGNVQVQP*
Ga0157372_129140301	3300013307	Corn Rhizosphere	AREQNNGRIVGEMTFSDPNVVAVEDPDATPGPNNAGAIVQANFDCLKITGNRAVMSGVISQSNIFSAVGLRILLVVEDNGEGINAASTDKLTWGIYQPSGGAWTPKDAEREDDNGAGLSWLATDFERSDDVGVPSNQSKVVGCQSFSLAAYSFVDVAHGGGNIQVQP*
Ga0132258_129464511	3300015371	Arabidopsis Rhizosphere	RVLLVVEDNGEGTNAAADRLTWGVYPNAATGWTPKDAERDDDNGASLTWIAIDAERPDLPGIPSNRSTTVRCDSFPLSSYSFVDVGHGNGNIQVKP*
Ga0132256_1022789721	3300015372	Arabidopsis Rhizosphere	GTVVGDMTFSDPAVIPIDDADATGGTNTAGAMVRATFDCLKITGNRAVMSGVISESNILSAVGLRILLVVEDNGEGVNAANPDKLTWGVYQPTATGWVPKDFERDDDNGASLSWLATDFERPDDPGIPSRLDKTVGCQSFALGAYTLVDVAQGGGNIQVQP*
Ga0182009_100530283	3300021445	Soil	GLVVESNVPAAIGLRVLLVVEDNGEGINAPSNDRLTWGVYRNPATGWTPKDSERDDDNGALLSWIATDSERTDDGGIPSNQSRIIGCQSFPLSSYSFVDITHGGGNVQVQP
Ga0207692_106431631	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MTFTDPNATVVIDPDAPPSTNGPQPGASVRATFDCLKISGNRAVMSGVIVESNVLTAIGLRVLLVVEDNGEGVNAPANDRLTWGVYQNPATGWTPKDSERDDDIGATLSWLATDAERPDDAGIPSNQSRIVGCQSFPLSSYSFVDIAHGGGNVQVQP
Ga0207710_105549251	3300025900	Switchgrass Rhizosphere	GNRAVMSGVISESNILNAIGLRVLLVVEDNGEGVNALTDKLTWGIYTPQGTGWTPKDAERDDDNGASLKWLATDFERTDDNGIPSNQSKIVGCESFSLAAYSFVDVAHGGGNIQVSP
Ga0207645_109994401	3300025907	Miscanthus Rhizosphere	MTFSDQAAVPVIDPDNSTEITSPGAVMTAKFDCLQITGNRAVMSGLVSESNVAAALGLRVLLVVEDNGEGVNVPTPDKLTWGVYQSSSANWIPKDAERDDDNGASLTWIARDAEREDDPGVPSNQSKTIGCQSFPLSSYSFVDIKHGGGNVQVQP
Ga0207643_106113332	3300025908	Miscanthus Rhizosphere	FNAREQNKGTVVGDMTFSDPAVIPIDDADATGGTNTAGAMVRATFDCLKITGNRAVMSGVISESNILSAVGLRILLVVEDNGEGVNAANPDKLTWGVYQPTATGWVPKDFERDDDNGASLSWLATDFERPDDPGIPSRLDKTVGCQSFALGAYTLVDVAQGGGNIQVQP
Ga0207654_107949832	3300025911	Corn Rhizosphere	NALTDKLTWGIYTPQGSGWTPKDAERDDDNGASLNWIAKDFERDDDTGISSNQSKIVGCQSFSLGAYSFVDIAHGGGNVQVQP
Ga0207654_110334581	3300025911	Corn Rhizosphere	SDPNVVAVEDPDATPGPNNAGALVQAKFDCLKITGNRAVMGGVISQSNILSAVGLRILLVVEDNGEGINSASTDKLTWGIYQPSGGAWTPKDAEREDDNGAGLSWLATDFERTDDAGVPSNQIKAVGCQSFSLAAYSFVDVAHGGGNIQVQP
Ga0207646_103596401	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	AIGLRVLLVVEDNGEGVDALNDKLTWGIYTSQSTNWTPTDAEREDDNGASLSWLAKDFERDDDVGVPSNQSKTVGCQSFSLAAYSFVDVKHGGGNIQVQP
Ga0207646_119248662	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	ESNVLTAIGFRVLLVVEDNGEGINAPGLDKLTWGVYQNPASGWTPKDSERDDDIGATLSWLATDAERSDDVGVPSNQSKVIGCQSFPLSSYSFVDIAHGGGNVQVQP
Ga0207650_117907951	3300025925	Switchgrass Rhizosphere	MRAKFDCLKITDNRAVMSGVIVESNVATSIGLRVLLVVEDNGEGVGIPTPDKLTWGVYQNPNGNWTPKDAERDDDNGASLTWIVKDAEREDDPGVPSNQSKIIGCTSFPLSSYSFVDVKHGGGNIQVQP
Ga0207659_109986742	3300025926	Miscanthus Rhizosphere	QAAVPVIDPDNSTEITSPGAVMTAKFDCLQITGNRAVMSGLVSESNVAAALGLRVLLVVEDNGEGVNVPTPDKLTWGVYQSSSANWIPKDAERDDDNGATLTWIARDAEREDDPGVPSNQSKTIGCQSFPLSSYSFVDIKHGGGNVQVQP
Ga0207686_117134421	3300025934	Miscanthus Rhizosphere	VGEMTFSDPNVLAVADPDATPGPNNAGALVQAKFDCLKITGNRAVMGGVISQSNILSAVGLRILLVVEDNGEGINAASTDKLTWGIYQPSGGAWTPKDAERDDDNGAGLSWLATDFERTDDAGIPSNQSKAVGCQSFSLAAYSFVDVAHGGGNIQVQP
Ga0207669_107322971	3300025937	Miscanthus Rhizosphere	NGRTVGQMTFSDQAAVPVIDPDNSTEITSPGAVMTAKFDCLQITGNRAVMSGLVSESNVAAALGLRVLLVVEDNGEGVNVPTPDKLTWGVYQSSSANWIPKDAERDDDNGASLTWIARDAEREDDPGVPSNQSKTIGCQSFPLSSYSFVDIKHGGGNVQVQP
Ga0207711_101035781	3300025941	Switchgrass Rhizosphere	ALVRAKFDCLKITGNRAVMSGVISESNILNAIGLRVLLVVEDNGEGVNALTDKLTWGIYTPQGTGWTPKDAERDDDNGSSLKWLATDFERTDDNGIPSNQSKIVGCESFSLAAYSFVDVAHGGGNIQVLP
Ga0207679_106093571	3300025945	Corn Rhizosphere	AAVPVPDPDDSTAINSPGAVMTAKFDCLQIEGNRAVMSGVISESNIANALGLRVLLVVEDNGEGVNIPTPDKLTWGVYQSSNTSWTPKDAERDDDNGASLKWIAKDAEREDDPGVPSNQSNEIGCKSFPLSSYSFVDIKHGGGNVQVQP
Ga0207679_108819351	3300025945	Corn Rhizosphere	VVAVEDPDATPGPTNAGALVQANFDCLKITGNRAVMSGVISQSNLLSAVGLRILLVVEDNGEGINAATTDKLTWGIYQPSGGAWTPKDAERDDDNGAGLSWLATDFERMDDIGVPSNQSKIVGCQSFNLAAYSLVDVAHGGGNIQVQP
Ga0207712_107826362	3300025961	Switchgrass Rhizosphere	IPEGATVPGVQMTVTFDCVKVQGNRAVMGGVITSSNILAAINHRALLVVEDNGEGIDAPAPDRLTWGVYLNVTKDWTPKDSEREDDNGASLTWIATDAERPELPGIPSNQSTTVRCDSFPLSSYAFVDVAHGNGNIQVKPKN
Ga0207674_101168721	3300026116	Corn Rhizosphere	ASEGSGTPGALVRAKFDCLKITGNRAVMSGVISESNILNAIGLRVLLVVEDNGEGVNALTDKLTWGIYTPQGTGWTPKDAERDDDNGASLKWLATDFERTDDNGIPSNQSKIVGCESFSLAAYSFVDVAHSGGNIQVSP
Ga0207674_106018531	3300026116	Corn Rhizosphere	SESNILSAVGLRVLLVVEDNGEGINAFTDKLTWGIYTPQGTGWTPKDAERDDDNGASLTWLAKDFERPDDAGIPSNPSKIVGCESFSLGAYSFVDIAHGGGNVQVSP
Ga0207683_109936332	3300026121	Miscanthus Rhizosphere	MTAKFDCLQITGNRAVMSGLVSESNVAAALGLRVLLVVEDNGEGVNVPTPDKLTWGVYQSSSANWIPKDAERDDDNGASLTWIARDAEREDDPGVPSNQSKTIGCQSFPLSSYSFVDIKHGGGNVQVQP
Ga0209387_10380751	3300027639	Agricultural Soil	ITGNQAVMSGIISQSNIAAAIGLRVLLVVQDAGEGVNIPNADKLTWGVYQPATGNWIPKDAERDDDNGATLTWIAKDAERDDDVGVPSNQSKAPIGCQSFPLSSYSFVDVKHGGGNIQVQ
Ga0209486_108286521	3300027886	Agricultural Soil	IGLRVLLVVEDNGEGVNIPTVDKHTWGVYQSSANTWIPKDAERDDDNGALLTWIATDAERPDDAGVPSNPSKVIGCQTFPVSSYSFADIKHGGGNVQVQP
Ga0209382_101261365	3300027909	Populus Rhizosphere	MTFSDPSAIPDGATTPGVQLTATFDCVKVQGNRAVMGGVITSSNVLSAIDRRILLVVEDNGEGINAPAPDRLTWGVYENAVSGWTPKDAERDDDNGAFLSWLATDFERPDDPGFPSNRSNIVRCDSFPLSSYSFVDVGHGNGNIQVKPN
Ga0268240_100166281	3300030496	Soil	AANDKLTWGIYQPPASGWVPQDAERDDDNGAGLKWIATDFERPDEPGIPSNQSKIIGCQSFSVASYDFTDVKHGGGNIQVQP
Ga0310887_101956632	3300031547	Soil	NRAVMSGLVSESNVAAALGLRVLLVVEDNGEGVNVPTPDKLTWGVYQSSSANWIPKDAERDDDNGASLTWIARDAEREDDPGVPSNQSKTIGCQSFPLSSYSFVDIKHGGGNVQVQP
Ga0307408_1013671402	3300031548	Rhizosphere	DQAAVPVPDPDNPTAITTPGTVITARFDCLQITGKQAVMSGVISESNIAAALGLRVLLVVEDNGEGVNIPTADKLTWGVYQTATQNWIPTDAERDDDIGASLTWIAKDFERDDDTGVPSNQSNTIGCQSFPLSSYSFVDVKHGGGNIQVQP
Ga0307412_120398091	3300031911	Rhizosphere	VMSGVITESNIAAAIGVRVLLVVEDNGEGVNIATPDKLTWGVYQSSATNWIPKDAERDDDNGASLTWIAKDAERSDDAGVPSNPSKTIGCQSFPLSSYSFVDIKHGGGNIQVQP
Ga0310891_103567942	3300031913	Soil	MSGLVSESNVAAALGLRVLLVVEDNGEGVNVPTPDKLTWGVYQSSSANWIPKDAERDDDNGASLTWIARDAEREDDPGVPSNQSKTIGCQSFPLSSYSFVDIKHGGGNVQVQP
Ga0310885_100584901	3300031943	Soil	ATVPGVQMTVTFDCVKVQGNRAVMGGVITSSNILAAINNRALLVVEDNGEGIDAPAPDRLTWGVYLNVTKDWTPKDSEREDDNGASLTWIATDAERPELPGIPSNQSTTVRCDSFPLSSYAFVDVAHGNGNIQVKPKN
Ga0310897_104056992	3300032003	Soil	TVGQMTFSDQAAVPVIDPDNSTEITSPGAVMTAKFDCLQITGNRAVMSGLVSESNVAAALGLRVLLVVEDNGEGVNVPTPDKLTWGVYQSSSANWIPKDAERDDDNGASLTWIARDAEREDDPGVPSNQSKTIGCQSFPLSSYSFVDIKHGGGNVQVQP
Ga0310906_105356851	3300032013	Soil	STIPEGATVPGVQMTVTFDCVKVQGNRAVMGGVITSSNILAAINNRALLVVEDNGEGIDATAPDRLTWGVYLNVTRDWTPKDSEREDDNGASLTWIATDSERPDLPGIPSNQSTPVRCDSFPLSSYAFVDVAHGNGNIQVKPKN
Ga0315912_100165321	3300032157	Soil	PAAAPVPDPDDSTAITSPGTLMTAKFDCLKITGNQAVMSGVITESNIAAALGLRVLLVVEDGGEGVNTPTPDKLTWGVYQPATPGWTPKDAERDDDNGASLTWIAKDAERDDDVGVPSNQSKVIGCGSFPLSSYSFVDIKHGGGNIQVQP
Ga0310810_101502683	3300033412	Soil	DPNATLVVDPDAPPSPNGPTTGASMRASFDCLKITGNRAVMSGVIVESNVLTAIGLRVLLVVEDNGEGIDAPANDRLTWGVYQNPAAGWTPKDAERDDDIGASLSWLATDAERSDDAGIPSNQSKIVGCQSFPLSSYSFVDIAHGGGNVQVQP

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F068238

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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