Metagenome / Metatranscriptome Family F068199

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F068199
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	98 residues
Representative Sequence	MRYVDELKRSASESAVVWGRTWRRRYLRVNAKKLSVAACESDPVAAISALGDLYQAECQTPGSRVKLSEKTELAETLMRACRQLALGQDPAPITSRPW
Number of Associated Samples	88
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	52.80 %
% of genes near scaffold ends (potentially truncated)	36.80 %
% of genes from short scaffolds (< 2000 bps)	68.80 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (64.800 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (31.200 % of family members)
Environment Ontology (ENVO)	Unclassified (47.200 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (68.800 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.76% β-sheet: 0.00% Coil/Unstructured: 45.24%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
c.37.1.19: Tandem AAA-ATPase domain	d1wp9a2	1wp9	0.63564
e.8.1.4: RNA-dependent RNA-polymerase	d1muka_	1muk	0.63315
c.37.1.0: automated matches	d3tbka2	3tbk	0.60799
a.128.1.4: Aristolochene/pentalenene synthase	d4kwda_	4kwd	0.60719
a.25.1.7: MiaE-like	d6zmbb_	6zmb	0.60614

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF09055	Sod_Ni	4.00
PF13360	PQQ_2	3.20
PF00079	Serpin	3.20
PF00293	NUDIX	2.40
PF14016	DUF4232	2.40
PF04542	Sigma70_r2	2.40
PF01636	APH	2.40
PF00005	ABC_tran	2.40
PF08044	DUF1707	2.40
PF00171	Aldedh	2.40
PF04185	Phosphoesterase	2.40
PF00717	Peptidase_S24	1.60
PF04545	Sigma70_r4	1.60
PF00004	AAA	1.60
PF01370	Epimerase	0.80
PF08386	Abhydrolase_4	0.80
PF13622	4HBT_3	0.80
PF01548	DEDD_Tnp_IS110	0.80
PF08241	Methyltransf_11	0.80
PF13649	Methyltransf_25	0.80
PF04012	PspA_IM30	0.80
PF07702	UTRA	0.80
PF01547	SBP_bac_1	0.80
PF13808	DDE_Tnp_1_assoc	0.80
PF01061	ABC2_membrane	0.80
PF07969	Amidohydro_3	0.80
PF00067	p450	0.80
PF13006	Nterm_IS4	0.80
PF06974	WS_DGAT_C	0.80
PF00392	GntR	0.80
PF02371	Transposase_20	0.80
PF01494	FAD_binding_3	0.80
PF01156	IU_nuc_hydro	0.80
PF09364	XFP_N	0.80
PF00892	EamA	0.80
PF03167	UDG	0.80
PF00440	TetR_N	0.80
PF00107	ADH_zinc_N	0.80
PF13376	OmdA	0.80
PF04851	ResIII	0.80
PF02604	PhdYeFM_antitox	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG4826	Serine protease inhibitor	Posttranslational modification, protein turnover, chaperones [O]	3.20
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	2.40
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	2.40
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	2.40
COG3511	Phospholipase C	Cell wall/membrane/envelope biogenesis [M]	2.40
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	2.40
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	2.40
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	2.40
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	2.40
COG1842	Phage shock protein A	Transcription [K]	1.60
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.60
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.60
COG0692	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.80
COG1573	Uracil-DNA glycosylase	Replication, recombination and repair [L]	0.80
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.80
COG1957	Inosine-uridine nucleoside N-ribohydrolase	Nucleotide transport and metabolism [F]	0.80
COG2124	Cytochrome P450	Defense mechanisms [V]	0.80
COG2161	Antitoxin component YafN of the YafNO toxin-antitoxin module, PHD/YefM family	Defense mechanisms [V]	0.80
COG3663	G:T/U-mismatch repair DNA glycosylase	Replication, recombination and repair [L]	0.80
COG4118	Antitoxin component of toxin-antitoxin stability system, DNA-binding transcriptional repressor	Defense mechanisms [V]	0.80
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.80
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.80 %
Unclassified	root	N/A	35.20 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	64.80 %
Unclassified	root	N/A	35.20 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	64.80 %
Unclassified	root	N/A	35.20 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	52.80 %
Unclassified	root	N/A	35.20 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.20 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	50.40 %
Unclassified	root	N/A	35.20 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	2.40 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.80 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.20 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	32.00 %
Nitriliruptoria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria	0.80 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.80 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.80 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.80 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.20 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	5.60 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	4.00 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	3.20 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	1.60 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.60 %
Nitriliruptorales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales	0.80 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.80 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.80 %
unclassified Acidimicrobiia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia	0.80 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.80 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.80 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.80 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.20 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.00 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	2.40 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1.60 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	1.60 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.60 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.80 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.80 %
unclassified Nitriliruptorales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales	0.80 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.80 %
Brevibacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Brevibacteriaceae	0.80 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.80 %
Nocardiopsaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae	0.80 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.80 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.80 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.20 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.00 %
Subtercola	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Subtercola	2.40 %
Asanoa	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Asanoa	1.60 %
Geodermatophilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus	0.80 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.80 %
Spelaeicoccus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Brevibacteriaceae → Spelaeicoccus	0.80 %
Nitriliruptorales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium	0.80 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.80 %
Paraburkholderia caribensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia caribensis	0.80 %
Nocardiopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis	0.80 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.80 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.80 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.80 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.80 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.80 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.20 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4.00 %
Subtercola lobariae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Subtercola → Subtercola lobariae	2.40 %
Asanoa	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Asanoa	1.60 %
Spelaeicoccus albus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Brevibacteriaceae → Spelaeicoccus → Spelaeicoccus albus	0.80 %
Geodermatophilus obscurus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	0.80 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.80 %
Nitriliruptorales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium	0.80 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.80 %
Paraburkholderia caribensis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia caribensis	0.80 %
Nocardiopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis	0.80 %
Acidimicrobiia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	0.80 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.80 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.80 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.80 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_102006584	All Organisms → cellular organisms → Bacteria	1830	Open in IMG/M
3300001384\|JGI20190J14840_1004021	Not Available	1676	Open in IMG/M
3300001403\|JGI20205J14842_1008601	Not Available	1306	Open in IMG/M
3300001418\|JGI20188J14859_1010795	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1123	Open in IMG/M
3300001454\|JGI20204J15135_1009699	Not Available	914	Open in IMG/M
3300002245\|JGIcombinedJ26739_100586351	Not Available	992	Open in IMG/M
3300004152\|Ga0062386_100086693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2395	Open in IMG/M
3300004267\|Ga0066396_10014118	Not Available	1003	Open in IMG/M
3300005435\|Ga0070714_100338574	Not Available	1410	Open in IMG/M
3300005435\|Ga0070714_101486185	Not Available	662	Open in IMG/M
3300005436\|Ga0070713_100000980	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	18279	Open in IMG/M
3300005436\|Ga0070713_100019335	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5197	Open in IMG/M
3300005610\|Ga0070763_10040978	Not Available	2166	Open in IMG/M
3300005610\|Ga0070763_10491739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Subtercola → Subtercola lobariae	701	Open in IMG/M
3300005713\|Ga0066905_100255607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1349	Open in IMG/M
3300005921\|Ga0070766_10681721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Subtercola → Subtercola lobariae	695	Open in IMG/M
3300006028\|Ga0070717_10003806	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10853	Open in IMG/M
3300006028\|Ga0070717_10271091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1503	Open in IMG/M
3300006028\|Ga0070717_10459205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Brevibacteriaceae → Spelaeicoccus → Spelaeicoccus albus	1148	Open in IMG/M
3300006028\|Ga0070717_12147995	Not Available	502	Open in IMG/M
3300006059\|Ga0075017_100955698	Not Available	666	Open in IMG/M
3300006163\|Ga0070715_10016977	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	2746	Open in IMG/M
3300006176\|Ga0070765_100047081	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3494	Open in IMG/M
3300006854\|Ga0075425_100143286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2735	Open in IMG/M
3300006914\|Ga0075436_100146632	All Organisms → cellular organisms → Bacteria	1660	Open in IMG/M
3300009792\|Ga0126374_10744694	Not Available	742	Open in IMG/M
3300010046\|Ga0126384_10030436	All Organisms → cellular organisms → Bacteria	3582	Open in IMG/M
3300010046\|Ga0126384_10364256	All Organisms → cellular organisms → Bacteria	1209	Open in IMG/M
3300010046\|Ga0126384_11578581	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → unclassified Acidimicrobiia → Acidimicrobiia bacterium	617	Open in IMG/M
3300010047\|Ga0126382_10245203	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1309	Open in IMG/M
3300010048\|Ga0126373_10061317	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	3371	Open in IMG/M
3300010048\|Ga0126373_10144050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2258	Open in IMG/M
3300010048\|Ga0126373_10152573	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2197	Open in IMG/M
3300010048\|Ga0126373_10291643	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1623	Open in IMG/M
3300010048\|Ga0126373_10401708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1395	Open in IMG/M
3300010048\|Ga0126373_11526118	Not Available	733	Open in IMG/M
3300010048\|Ga0126373_11806701	Not Available	675	Open in IMG/M
3300010048\|Ga0126373_13322368	Not Available	500	Open in IMG/M
3300010358\|Ga0126370_10002087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia caribensis	9362	Open in IMG/M
3300010358\|Ga0126370_10064005	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2401	Open in IMG/M
3300010359\|Ga0126376_10089733	All Organisms → cellular organisms → Bacteria	2312	Open in IMG/M
3300010360\|Ga0126372_12767982	Not Available	542	Open in IMG/M
3300010361\|Ga0126378_10267069	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1808	Open in IMG/M
3300010361\|Ga0126378_10478196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1360	Open in IMG/M
3300010361\|Ga0126378_10574852	Not Available	1241	Open in IMG/M
3300010361\|Ga0126378_11684135	Not Available	721	Open in IMG/M
3300010361\|Ga0126378_12415242	Not Available	600	Open in IMG/M
3300010361\|Ga0126378_13212606	All Organisms → cellular organisms → Bacteria	520	Open in IMG/M
3300010362\|Ga0126377_10524966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1219	Open in IMG/M
3300010366\|Ga0126379_10145291	All Organisms → cellular organisms → Bacteria	2201	Open in IMG/M
3300010366\|Ga0126379_10195574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1939	Open in IMG/M
3300010371\|Ga0134125_10192193	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2272	Open in IMG/M
3300010376\|Ga0126381_100045467	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5344	Open in IMG/M
3300010376\|Ga0126381_100201987	Not Available	2658	Open in IMG/M
3300010376\|Ga0126381_100309957	All Organisms → cellular organisms → Bacteria	2165	Open in IMG/M
3300010376\|Ga0126381_101424071	Not Available	1002	Open in IMG/M
3300010376\|Ga0126381_101554720	Not Available	956	Open in IMG/M
3300010376\|Ga0126381_102651530	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	717	Open in IMG/M
3300010379\|Ga0136449_100156608	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4451	Open in IMG/M
3300010379\|Ga0136449_101572019	Not Available	1001	Open in IMG/M
3300010398\|Ga0126383_10077579	Not Available	2886	Open in IMG/M
3300010398\|Ga0126383_11004700	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	923	Open in IMG/M
3300010401\|Ga0134121_13208504	Not Available	505	Open in IMG/M
3300010866\|Ga0126344_1015696	Not Available	604	Open in IMG/M
3300010880\|Ga0126350_10244605	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae → Geodermatophilus → Geodermatophilus obscurus	1518	Open in IMG/M
3300012210\|Ga0137378_11082758	Not Available	716	Open in IMG/M
3300012924\|Ga0137413_11345391	Not Available	575	Open in IMG/M
3300012948\|Ga0126375_10101510	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1705	Open in IMG/M
3300012971\|Ga0126369_10189078	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1975	Open in IMG/M
3300012971\|Ga0126369_10257774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1720	Open in IMG/M
3300012971\|Ga0126369_11809859	Not Available	699	Open in IMG/M
3300014164\|Ga0181532_10059887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2480	Open in IMG/M
3300014165\|Ga0181523_10016094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5122	Open in IMG/M
3300015242\|Ga0137412_10048220	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	3473	Open in IMG/M
3300015371\|Ga0132258_11337484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1810	Open in IMG/M
3300016319\|Ga0182033_11410580	Not Available	627	Open in IMG/M
3300016387\|Ga0182040_11712681	Not Available	537	Open in IMG/M
3300017822\|Ga0187802_10227442	Not Available	720	Open in IMG/M
3300017924\|Ga0187820_1014953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1902	Open in IMG/M
3300017926\|Ga0187807_1007292	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3384	Open in IMG/M
3300017932\|Ga0187814_10142167	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Asanoa	893	Open in IMG/M
3300017937\|Ga0187809_10014809	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2531	Open in IMG/M
3300017942\|Ga0187808_10390533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	635	Open in IMG/M
3300017959\|Ga0187779_10005208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7680	Open in IMG/M
3300017970\|Ga0187783_10242783	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	1318	Open in IMG/M
3300017972\|Ga0187781_10380417	All Organisms → cellular organisms → Bacteria	1007	Open in IMG/M
3300017974\|Ga0187777_10185449	All Organisms → cellular organisms → Bacteria	1398	Open in IMG/M
3300017974\|Ga0187777_10361398	Not Available	999	Open in IMG/M
3300017975\|Ga0187782_10089540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	2258	Open in IMG/M
3300018060\|Ga0187765_10001054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	10534	Open in IMG/M
3300018060\|Ga0187765_10082439	Not Available	1720	Open in IMG/M
3300018060\|Ga0187765_10912156	Not Available	595	Open in IMG/M
3300021181\|Ga0210388_10027147	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	4679	Open in IMG/M
3300021478\|Ga0210402_10135348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2237	Open in IMG/M
3300021560\|Ga0126371_11067834	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	947	Open in IMG/M
3300023056\|Ga0233357_1052503	Not Available	529	Open in IMG/M
3300025574\|Ga0208717_1031963	Not Available	1335	Open in IMG/M
3300025633\|Ga0208480_1007741	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3542	Open in IMG/M
3300027029\|Ga0208731_1031413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	581	Open in IMG/M
3300027567\|Ga0209115_1056037	All Organisms → cellular organisms → Bacteria → Terrabacteria group	898	Open in IMG/M
3300027725\|Ga0209178_1188497	Not Available	726	Open in IMG/M
3300027824\|Ga0209040_10013696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	5521	Open in IMG/M
3300027855\|Ga0209693_10132628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Subtercola → Subtercola lobariae	1232	Open in IMG/M
3300027908\|Ga0209006_10045770	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3938	Open in IMG/M
3300028906\|Ga0308309_11584593	Not Available	558	Open in IMG/M
3300030528\|Ga0210277_10149179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	944	Open in IMG/M
3300030629\|Ga0210268_1004595	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1598	Open in IMG/M
3300030741\|Ga0265459_10018698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2074	Open in IMG/M
3300030815\|Ga0265746_1061161	Not Available	540	Open in IMG/M
3300031231\|Ga0170824_103750518	Not Available	819	Open in IMG/M
3300031545\|Ga0318541_10588162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	623	Open in IMG/M
3300031679\|Ga0318561_10241780	All Organisms → cellular organisms → Bacteria → Terrabacteria group	983	Open in IMG/M
3300031708\|Ga0310686_104229774	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Asanoa	1244	Open in IMG/M
3300031708\|Ga0310686_104659644	All Organisms → cellular organisms → Bacteria	583	Open in IMG/M
3300031708\|Ga0310686_104781299	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	866	Open in IMG/M
3300031718\|Ga0307474_10327094	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Nitriliruptoria → Nitriliruptorales → unclassified Nitriliruptorales → Nitriliruptorales bacterium	1184	Open in IMG/M
3300031793\|Ga0318548_10375845	Not Available	697	Open in IMG/M
3300031799\|Ga0318565_10492446	Not Available	592	Open in IMG/M
3300031805\|Ga0318497_10729098	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Nocardiopsaceae → Nocardiopsis	556	Open in IMG/M
3300032009\|Ga0318563_10412280	Not Available	731	Open in IMG/M
3300032160\|Ga0311301_10109468	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5315	Open in IMG/M
3300032160\|Ga0311301_11076548	Not Available	1050	Open in IMG/M
3300032783\|Ga0335079_10009922	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	10844	Open in IMG/M
3300032828\|Ga0335080_10274513	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1837	Open in IMG/M
3300032895\|Ga0335074_10034799	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	7038	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.60%
Host-Associated	Host-Associated	2.40%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.80%
Aquatic	Environmental → Aquatic	8.80%
Plants	Host-Associated → Plants	2.40%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.80%
Freshwater	Environmental → Aquatic → Freshwater	8.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.60%
Sediment	Environmental → Aquatic → Sediment	0.80%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.40%
Loam	Environmental → Terrestrial → Soil → Loam	16.80%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.60%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.20%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.80%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.20%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.80%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	4.80%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.80%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	31.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.60%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	7.20%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.60%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.80%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	4.80%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.20%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.20%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.20%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.40%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	2.40%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.60%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.60%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.60%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	1.60%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.60%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	1.60%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001384	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 shallow-072012	Environmental	Open in IMG/M
3300001403	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012	Environmental	Open in IMG/M
3300001418	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 shallow-072012	Environmental	Open in IMG/M
3300001454	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004152	Coassembly of ECP12_OM1, ECP12_OM2, ECP12_OM3	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010866	Boreal forest soil eukaryotic communities from Alaska, USA - C1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010880	Boreal forest soil eukaryotic communities from Alaska, USA - C5-1 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental	Open in IMG/M
3300014165	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaG	Environmental	Open in IMG/M
3300015242	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017926	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_2	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300017975	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300023056	Soil microbial communities from Shasta-Trinity National Forest, California, United States - GEON-SFM-MS2	Environmental	Open in IMG/M
3300025574	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-3 shallow (SPAdes)	Environmental	Open in IMG/M
3300025633	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300027029	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF045 (SPAdes)	Environmental	Open in IMG/M
3300027567	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O2 (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027855	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3 (SPAdes)	Environmental	Open in IMG/M
3300027908	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030528	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO135-VCO084SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030629	Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO153-ARE093SO (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030741	Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assembly	Environmental	Open in IMG/M
3300030815	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSU2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031799	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f21	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032895	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1020065842	3300000956	Soil	MRYVDEVKRSASESAVAWGRTWRRRYLRESAKKLSVAACESDPVAAISALGDLYQAECQTPANRVKSSGRTEIAETLMLACRQLALGQDPAPITSRTW*
JGI20190J14840_10040212	3300001384	Arctic Peat Soil	MRYVDELKQSASESAAAWGATRWRRKYLRENAKKLTVAACDSDPVSAISALGVRYEAECQTGGKRVDGAEKMKMAETLMLACRQLALGQDPAPLTGRPS*
JGI20205J14842_10086012	3300001403	Arctic Peat Soil	MRYVDELKQSASESAAAWGATRWRRKYLRENAKKLTVAACDSDPVSAISALGVRYEAECQTGGKRVDGAQKTKMAETLMLACRQLALGQDPAPLTGRPS*
JGI20188J14859_10107953	3300001418	Arctic Peat Soil	MRIMRYVDELKQSASESAGAWGATRWRRKYLRESAKKLTVAACDSDPVSAISALGVRYEAECQTGGKRVHGAEKMKMAETLMLACRQLALGQDPAPLTGRSS*
JGI20204J15135_10096991	3300001454	Arctic Peat Soil	MRIMRYVDELKQSASESAAAWGATRWRRKYLRENAKKLTVAACDSDPVSAISALGVRYEAECQTGGKRVDGAEKMKMAETLMLACRQLALGQDPAPLTGRPS*
JGIcombinedJ26739_1005863512	3300002245	Forest Soil	MRYVDELKQSASGSAGAWGATRWRRKYLRESAKKLTVAACDSDPVSAISALGVRYEAECQMGGKRVDGAEKVKMAETLMLACRQLALGQDPAPLTGRPS*
Ga0062386_1000866933	3300004152	Bog Forest Soil	MRYVDELNRAASESGVGWGRTWRRRYLRESAKRLSVAACESDPVAAIGALRDVYQAEGQTRGKLSDQRDLAETLMRACQQLVLGRDPVPITPRPR*
Ga0066396_100141182	3300004267	Tropical Forest Soil	MRYVDELKRSASESAVAWGHIWRRRYLRDSAKKLSVAACESDPVAAISALGDLYQAECQMRGHGVKFAEKTEIAETLMRACRQLALGQDPAPIPPRPW*
Ga0070714_1003385741	3300005435	Agricultural Soil	MRYVDELKRSASESAGAWGATRWRWKYLRENAKKLTVAACESDPVSAISALGVRYEAECQTGGKRVDGAEKVKAAEILMLACRQLALGQD
Ga0070714_1014861851	3300005435	Agricultural Soil	GCEAFIRAMRIMRYVDELKRSASEPAGAWGATRWRRKYLRENAKKLTVAACESDPVSAIGALGVRYEAECQTGGKRVDAAEKTGMAETLMLACGQLALGQDPAPITSLPS*
Ga0070713_1000009805	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRYVDELKRSASESAVIWGRTRRRRYWQENAKKLSVAACESDPVDAISTLGDLYQAECQTRGNRVKFAEKTEMAETLMRACRQLALGQDPAPITPRP*
Ga0070713_1000193353	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MRYVDELNRSASESRAAWGRNRRRRKYLRENAKKLSAAACASDPVAALNDHGDLCQAECQTPGRRRKLRERAEMAETLMRACRQLAQGKDPAPIPHVSG*
Ga0070763_100409782	3300005610	Soil	MRYVDELKRSASESAGSWGAARWWRKNLRENAKKLTVAACESDPVSAVSALGVGYEADAQTAGQRVGQAEKTKMAETLMLACRQLALGEDPAPLTGRPS*
Ga0070763_104917392	3300005610	Soil	FIRAMRIMRYVDELKRSASESAGAWGAARWRRKQLRENAKKLTVAACDSDPVSAISALGVRYEAECQTGGERAGEAENKKMAETLMLACRQLALGRDPAPLTGRPS*
Ga0066905_1002556073	3300005713	Tropical Forest Soil	GCEAFIRAIRVMRYVDELKRSASESAVVWGRTWRRRYLRVNAKKLSVAACESDPVAAISALGDLYQAECQTPGSRVRLSEKTELAETLMRACRQLALGQDPAPITSRPW*
Ga0070766_106817211	3300005921	Soil	RAMRIMRYVDELKQSASGSAGAWGATRWRRKYLRESAKKLTVAACDSDPVSAISALGVRYEADCQTGGERAGEAENKKMAETLMLACRQLALGRDPAPLTGRPS*
Ga0070717_100038062	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MRYVDELNRSASESRAAWGRNRRRRKYLRENAKKLSAAACASDPVAALNDHGDLCQAECQTPGRRRKLRERAEMAETLMRACRQLAQGKDPASIPHVSG*
Ga0070717_102710912	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	EPAGAWGATRWRRKYLRENAKKLTVAACESDPVSAIGALGVRYEAECQTGGKRVDAAEKTGMAETLMLACGQLALGQDPAPITSLPS*
Ga0070717_104592052	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MRYVDELKRSASESAGAWGATRWRWKYLRENAKKLTLAACESDPVSAISALGVLYEAECQTGGKRVGGLEKMKMAETLMLACRQLALGQDPALP*
Ga0070717_121479952	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	DELKRSASESAVAWGRTGRWRRYLRENAKKLSVAACESDPVAAIIALGDLCQAECQTAGQRVKLSEKTEMAETLMRACRQLALGKDPAPITPRPR*
Ga0075017_1009556982	3300006059	Watersheds	CEAFIRAMRIMRYVDELKQSASESAGAWGATRWRRKYLRGSAKKLTVAACESDPVSAISALGVLYEAECQTGGRRVDGPVKMNMAETLMLACRQLALGQDPAPVAGRPS*
Ga0070715_100169771	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MRYVDELKRSASESAVIWGRTRRRRYWQENAKKLSVAACESDPVDAISTLGDLYQAECQTRGNRVKFAEKTEMAETLMRACRQLALGQDPAPI
Ga0070765_1000470815	3300006176	Soil	MRYVDELKRSASESAGAWGAARWWRKHLRENAKKLTVAACESDPVSAVRALGVRYEADCQTAGQRAGQAEKTKMAETLMLACRQLALGQDPAPLTGRPG*
Ga0075425_1001432863	3300006854	Populus Rhizosphere	MGAIRVMRYVDELKRSASGSAMVWGHTWRRRYLRENAKKLSVAACESDPVAAVSALGDAYQAECQPVGNRAKSAEKTELAETLMRACRQLALGQDPAPITSRP*
Ga0075436_1001466322	3300006914	Populus Rhizosphere	MGAIRVMRYVDELKRSASGSAMAWGHTWRRRYLRENAKKLSVAACESDPVAAVTALGDAYQAECQPVGNRAKSAEKTELAETLMRACRQLALGQDPAPITSRP*
Ga0126374_107446942	3300009792	Tropical Forest Soil	MRYVDELKRSASESAVVWGRSWRRRYLRVNAKKLSVAACESDPVAAISALGDLYQAECQTPGSRVKLSEKTELAETLMRACRQLALGQDPAPITARPW*
Ga0126384_100304364	3300010046	Tropical Forest Soil	MRYVDELKRSASESAVVWGRTWRRRYLRENAKKLSVAACESDPVAAISALGDLYQAECQTPSHRVKLPEKTEMAEALMRACRQLALGQDPAPITSRPW*
Ga0126384_103642561	3300010046	Tropical Forest Soil	MRYADELKRSASESAVVWGRTWRRRYLRVNAKKLSVAACESDPVAAISALGDLYQAECQTPGSRVKLSEKTELAETLMRACRQLALGQDPAPITSRPW*
Ga0126384_115785812	3300010046	Tropical Forest Soil	AFIRAIRVMRYVDELKRSASESAVVWGRSWRRRYLRENAKKLSVAACESDPVAAISALGDLYQAECQTPGKRVKPAERTEMAETLMRACRKLALGQDPAPVTSRPW*
Ga0126382_102452032	3300010047	Tropical Forest Soil	MRYVDELKRSASESAVVWGRTWRRRYLRVNAKKLSVAACESDPVAAISALGDLYQAECQTPGSRVKLSEKTERAETLMRACRQLALGQDPAPITSRPW*
Ga0126373_100613174	3300010048	Tropical Forest Soil	MRIMRYVDELKRSASESAAPWGRGRRRRKYLRENAKKLSVTACTSDPVAALGALGDLYEAEYQTLGQRVKKPEKAEMAEMLMRACRQLALGKDPAPITGENSPDVSP*
Ga0126373_101440501	3300010048	Tropical Forest Soil	MRYVDEVKRSASESAVAWGGTWRRRYLRASAQKLSAAACASDPVAAISVLRDLYQAECKTRGNRAKSSEKTDLAKALMRACHQLVLGQD
Ga0126373_101525732	3300010048	Tropical Forest Soil	MGAIRMMRYVDELKRSAPGSAVPWGRTWRRRYLRENAKKLTVAACESDPVAAVSALADGYQAECQTPGNRVNLAEKTELAETLMRACRQLALGQDPAPITSHPG*
Ga0126373_102916432	3300010048	Tropical Forest Soil	MRYVDELKRSASRSAVPWGRGWRRRKYLRENAKELSAAACTSDPVAALKTLGDLYQAECQKSGRRAKSSGKAEMAEMLMRACGQLAAGKDPAPMTRENSLDLDP*
Ga0126373_104017083	3300010048	Tropical Forest Soil	ESPLAWGRTWRRRYLRASAQKLSVAACASDPVAAITVLGNLYKAECQTSGKRGKLPKKTAMAETLMRACQQLALGQDPAPVTPRAR*
Ga0126373_115261182	3300010048	Tropical Forest Soil	SAVPWGRNWRRRRYLRENAKDLSTAACTSDPVTALRALGDRCQAECQTPGQRAKSPDKTEVAETLMRACRQLALGKDPAPITPRPS*
Ga0126373_118067011	3300010048	Tropical Forest Soil	MRYVDELKRSASGSAVVWGRSWRRRYLRENAKKLSVAACESDPVAAVSALGDGYQDECQTPGDRVKLAEKTELAEMLMRACRQLALGQDPAPITPPP*
Ga0126373_133223682	3300010048	Tropical Forest Soil	ESPLAWGRTWRRRYLRASAQKLSVAACASDPVAASSVLGNLYKAECQTRGKRGKLPKKTAMAEMLMRACQQLALGQDPAPISPRAR*
Ga0126370_100020875	3300010358	Tropical Forest Soil	MRYVDELKRSASESAVVWGRTWRRRYLRENAKKLSVAACESDPVAAISALGDLYQAECQTPSHRVKLPEKTEMAEALMRACRQLALGQDPAPITSRPR*
Ga0126370_100640051	3300010358	Tropical Forest Soil	MRYVDELKRSASESPVAWGRTSRRRYLRENAKKLSVAACESDPAAAISALSDLYQAECETLGNRVKFSEKTELAETLMRACRQLALGQDPAPITSRPW*
Ga0126376_100897332	3300010359	Tropical Forest Soil	MRYVDELKRSASESAVVWGRTWRRRYLRVNAKKLSVAACESDPVAAISALGDLYQAECQTPGSRVKLSERTELAETLMRACRQLALGQDPAPITSRPW*
Ga0126372_127679821	3300010360	Tropical Forest Soil	MRYVDELKRSASESTGVWGRTWRRRYLRENAKKLSVAACESDPVAAISALGDLYQAECQTPSHRVKLPEKTEMAEALMRACRQLALGQDPAPITSRP*
Ga0126378_102670692	3300010361	Tropical Forest Soil	MRYVDELKRSASESAVVWGRTWRRRYLRVNAKKLSVAACESDPVAAISALGDLYQAECQTPGSRVRLSEKTELAETLMRACRQLALGQDPAPITSRPW*
Ga0126378_104781962	3300010361	Tropical Forest Soil	MRYVDELKRSASQSAALWGRGRRRRRYLRENAEKLSEAACTSDPVTELRTLGDLYKAECQAPGQQVKSPEKTEMAEMLMRACGQLALGKDPAPVT*
Ga0126378_105748522	3300010361	Tropical Forest Soil	MRYVDELKRSASESPLAWGRTWRRRYLRASAQKLSVAACASDPVAAITVLGNLYKAECQTSGKRGKLPKKTAMAETLMRACQQLALGQDPAPVTPRAR*
Ga0126378_116841352	3300010361	Tropical Forest Soil	VWGRTWRRRYLRENAKKLSVAACESDPVAAISALGDLYQAECQTPSHRVKLPEKTEMAEALMRACRQLALGQDPAPITSRP*
Ga0126378_124152421	3300010361	Tropical Forest Soil	MRYVDELKRSASESSVAWGHTRRKYLREGGKKLSVAACESDPAAAVSALGDLYQAECQKRSKRVTPSEKTEMAETLMLACRQLALGQDPAPVTPRSR*
Ga0126378_132126061	3300010361	Tropical Forest Soil	VPWGRGWRRRKYLRENAKELSAAACTSDPVAALKTLGDLYQAECQKSGRRAKSPKKAEMAEMLMRACGQLAAGKDPAPMTRENSLDLDP*
Ga0126377_105249662	3300010362	Tropical Forest Soil	MRYVDELKRSASESAVVWGRSWRRRYLRENAKKLSVAACESDPVAAISALGDLYQAECQTPGKRVKPAERTEMAETLMRACRKLALGQDPAPVTSRPW*
Ga0126379_101452912	3300010366	Tropical Forest Soil	MRYVDELKRSASESAVVWGRSWRRRYLRVNAKKLSVAACESDPVAAISALGDLYQAECQTPGSRVKLSEKTELAETLMRACRQLALGQDPAPIT
Ga0126379_101955742	3300010366	Tropical Forest Soil	VAELKRSASESAMVWGRTGRRRHLRENAKKLSVAACESDPVAAISALGDLYQAECQTSGNRVDLSEKTEMAETLMRACRQLALGQDPAPIISRPL*
Ga0134125_101921933	3300010371	Terrestrial Soil	MRYVDELKRSASESAVIWGRTRRRRYWQENAKKLSVAACESDPVDAISTLGDLYQAECQTRGNRVEFAEKTEMAETLMRACRQLALGQDPAPITPRP*
Ga0126381_1000454671	3300010376	Tropical Forest Soil	MRYVDELKRSASGSRAVWGRNRRRRKYLRENAKKLSAAACASDPVAALEALGDLCEAEAQTPGRRVRARDKAELAEMLMRACRQLAQGKDPAPVTRAPR*
Ga0126381_1002019873	3300010376	Tropical Forest Soil	MRIMRYVDELERSASESAAPWGRGRRRRKYLRENAKKLSATACTSDPVAALGTLGGLYKAEYQTPGKRGKRPEQAQMAEMLMRACGQLALGKDPAPITGENSLDLSP*
Ga0126381_1003099572	3300010376	Tropical Forest Soil	MRYVDELKRSASESAVVWGRSWRRRYLRVNAKKLSVAACESDPVAAISALGDLYQAECQTPTSRVKLSEKTELAETLMRACRQLALGQDPAPITSRPW*
Ga0126381_1014240712	3300010376	Tropical Forest Soil	MRYVDELNRSASDSRALWGRGRRRRKYLRENAKKLSVAACTSDPVTALKTLGDLYQADCQTPGQRVKSPEQRELAEMLMQACGQLAEGKDPAPITGEKSLNLGP*
Ga0126381_1015547202	3300010376	Tropical Forest Soil	MRYVDELKRSAAESPLAWGRTWRRRYLRASAQKLSVAACASDPVAAISVLGNLYKAECQTRGKRGKLPKKTAMAETLMRACQQLALGQDPAPITPRAR*
Ga0126381_1026515301	3300010376	Tropical Forest Soil	ELKRSASASSVAWGHTRRKYLREGGKKLSVAACASDPAAAVSALGDLYQAECKTRGNRAKSSEKTDLAKALMRACHQLVLGQDPPPITPRPR*
Ga0136449_1001566085	3300010379	Peatlands Soil	MRYVDELKRSASESAVTWGRTWRRRYLRENAKKLSVAACESDPVAAIGALGDLYQAECDTRGKRVTSSEKTEMAETLMLACRQLALGQDPAPITRRPR*
Ga0136449_1015720192	3300010379	Peatlands Soil	MRIMRYVDELNRAASESGVGWGGTWRRRYLRENAKKLSVAACESDPVAAISALRDVYQAECQTRGKLSDQRDLTETLMRACQQLVLGRDPAPITPRPR*
Ga0126383_100775791	3300010398	Tropical Forest Soil	MRYVDELKRSASESAVVWGRTWRRRYLRENAKKLSVAACESDPVAAISALGDLYQAECQTPSHRVKLPEKTEMAEALMRACRQLALGQDPAPITSRP*
Ga0126383_110047001	3300010398	Tropical Forest Soil	GQPQHEDHEQGCEAFDRATRAMRYVAELKRSASESAMVWGRTGRRRYLRENAKKLSVAACESDPVAAISALGDLYQAECQTSGNRVDLSEKTEMAETLMRACRQLALGQDPAPIISRPL*
Ga0134121_132085041	3300010401	Terrestrial Soil	RYVDELKRSASESAVIWGRTRRRRYWQENAKKLSVAACESDPVDAISTLGDLYQAECQTRGNRVKFAEKTEMAETLMRACRQLALGQDPAPITPRP*
Ga0126344_10156961	3300010866	Boreal Forest Soil	MRIMRYVDELKRSASESAGAWGATRWRRKYLRENAKKLTVAACDSDPVSAISALGARYEADCQTGGKRVDGAEKMKMAETLMLACRQLALGQDPAPLTGRPS*
Ga0126350_102446051	3300010880	Boreal Forest Soil	MQYVDELKRSASESAVPRGHTWRRRRYLRENAKKLSVVACESDPVAALKALGDLCQAECQTPGQRVKLTEKTEMAETLMRACRQLALGKDPASITPAPGGDHEPRMD*
Ga0137378_110827581	3300012210	Vadose Zone Soil	MRYADELKRAASESAVARGRTWRRRRYLRENAKKLSVAACGSDPVAALEALGHLCQAECQTPGQRVKLPEKTEMAETLMRACRQLALGQ
Ga0137413_113453911	3300012924	Vadose Zone Soil	MRIMRYVDELKRSASEPAGAWGATRWRRKYLRESAKKLTVAACESDPVSATSALGVLYEAECQMGGTRVDGAEKTKMAETLMLACRQLALGQDPEPLTGRLTDC*
Ga0126375_101015101	3300012948	Tropical Forest Soil	MRYVDELKRSASESAVVWGRTWRRRYLRVNAKKLSVAACESDPVAAISALGDLYQAECQTPGSRVKLSEKTELAETLMRACRQLALGQDPAPITSRPW*
Ga0126369_101890783	3300012971	Tropical Forest Soil	MRYVAELKRSASESAMVWGRTGRRRYLRENAKKLSVAACESDPVAAISALGDLYQAECQTSGNRVDLSEKTEMAETLMRACRQLALGQDPAPIISRPL*
Ga0126369_102577742	3300012971	Tropical Forest Soil	MRYVDELKRSASESAAPWGRGRRRRKYLRENAKKLSVTACTSDPVAALGALGDLYEAEYQTLGQRVKKPEKAEMAEMLMRACRQLALGKDPAPITGENSPDVSP*
Ga0126369_118098591	3300012971	Tropical Forest Soil	MRYVDELKRSASESAVVWGRSWRRRYLRVNAKKLSVAACESDPVAAISALGDLYQAECQTPGNRVKLPERTEMAETLMRACRQLALGQDPAPISPRPR*
Ga0181532_100598872	3300014164	Bog	MRFADELKRSASESAVTGGRTWRRRYLRANAQKLSAAACDSDPVASISVLGDLYEAECQTRGKRVKSPEKAEMAETLMRACQQLALGQDPAPITSRPR*
Ga0181523_100160948	3300014165	Bog	MRFADELKRSASESAVTGGRTWRRRYLRANAQKLSAAACDSDPVASISVLGDLYEAECQTRGKRVKSPEKAEMAETLMRACQQLALGQDPAPITPRPR*
Ga0137412_100482201	3300015242	Vadose Zone Soil	MRIMRYVDELKRSASEPAGAWGATRWRRKYLRESAKKLTVAACESDPVSATSALGVLYEAECQMGGTRVDGAEKTKMAETLMLACRQLALGQDPAPLTGRPS*
Ga0132258_113374842	3300015371	Arabidopsis Rhizosphere	MRYVDELKRSASESAAVWGLNWRRRYLRENAKKLCAAACESDPVAAISALGDRYQAECQTPGNRAKLSEKTEMAETLMLACRQLALGQDPAPITSRPL*
Ga0182033_114105801	3300016319	Soil	HEQGCEVFITAMRVMRYVDELKRSAAQSAALWGRGRRRRKYLEENAKKLSVTACTSDPVAALEALGDLYQAEYQKPGKRAKMPEMAEMLMRACRQLALGKDPAPITRANSLDLNP
Ga0182040_117126812	3300016387	Soil	DELKRSASESAAVWGRGRRRRKYLRENAKKLSMTACTSDPVAALGALADLYQAEYQKPGKRAKMPEMAEMLMRACRQLALGKDPAPITRANSLDLNP
Ga0187802_102274421	3300017822	Freshwater Sediment	ELKRFASEPAESWRRTRWRRRYLREGAKKLSAAACESDPVAALRTLGGSYQAECQSGHKRVKTRDKTEMAESLMRACQQLARGEDPAPIIRRLG
Ga0187820_10149533	3300017924	Freshwater Sediment	MRYVDELNRSASESGMGWASSWRRRYLRANAKKLSVAACESDPVAAIRALRDVYQAECQTRSELSDKREMAETLMRACQQLVLGRDPAPITPRPR
Ga0187807_10072924	3300017926	Freshwater Sediment	MRYVDELNRSASESGVGWGRTWRRRYLRENAKKLSVAACESDPIAAISALRDVYEAEGQKRGKLSEKREMAETLMRACQQLVLGRDPAPITPRPR
Ga0187814_101421672	3300017932	Freshwater Sediment	MRYVDELNRAASESGVGWGRTWRRRYLRENAKKLSVAACESDPVAAISALRDVYQAEGQTRGKLSDQRDLAETLMRACQQLVLGRDPA
Ga0187809_100148091	3300017937	Freshwater Sediment	TKARGQPRQEDHEPGCETFIRAMRVMRYVDELNRSASESGVGWASSWRRRYLRANAKKLSVAACESDPVAAIRALRDVYQAECQTRSELSDKREMAETLMRACQQLVLGRDPAPITPRPR
Ga0187808_103905331	3300017942	Freshwater Sediment	LNRSASESGVGWGRTWRRRYLRDNAKKLSVAACESDPVAAISALRGVYQAECQTHAKLSEKREMAEMLMRACQQLVLGRDPAPITARPR
Ga0187779_100052086	3300017959	Tropical Peatland	MRYVDELKRSASESALAGGHTWRRRRYLRESAKKLSVAACESDPVAAISDLGDLYEAECQRRGKRVKSFEEMGMAETLMLACRQLAMGQDPAPITPRPS
Ga0187783_102427832	3300017970	Tropical Peatland	MRYVDELNRSASESGAGWGRTSRRRYLRENAKKLSVAACESDPVAAISALRDVYQAECQTRGKLSEKREMAETLMRACQQLVLGRDPAPITPRPR
Ga0187781_103804172	3300017972	Tropical Peatland	AGTWIRTRRRRSYVRESANKLSAAACESDPVAAISALGDFYQAECQTGGKRVKAPERTEVAEMLMRACRQLALGQAPAPIARPM
Ga0187777_101854491	3300017974	Tropical Peatland	DHEQGCVAFITAIRVMRYVDELKRAASEPNQSTWLSTRRRRKYLRESAKKLSVAACESDPATAISALGDLYQAECQARPESAKGTELTEMAEMLMRACRRLARGQHPAPVIPDPD
Ga0187777_103613982	3300017974	Tropical Peatland	VAWGHPWRRRYLRANAQKLSVAACASDPPAAVGVLGDLYQAECQPPGKPAKSPAKTEMAEMLMRACQQLALGQDPAPIALGPR
Ga0187782_100895402	3300017975	Tropical Peatland	MRYVDELKRSASESAGTWTRTRRWRSYVRESAKRLSVAACEGDPVAAISALGDSYQAECETRGKRVKTPEQTEMAEMLMRACRQLALGRDPEPIAPPQLAR
Ga0187765_100010542	3300018060	Tropical Peatland	MRYVDELKRSASDSAVAWGRPRRKYLREGAKKLSVAACESDPVAAISDLGDIYQAECQERGKRVTSSEKTEMAETLMLACRQLAQGQDPAPITPRSS
Ga0187765_100824391	3300018060	Tropical Peatland	TKGQPRQEDHEQGCEAFIRAIRVMRYVDELKRSASESAVVSGRIWRWRYLRKNAKKLSVAACESDPAAAVGALGDRYQAECQTGGKRVKLSDKTDMAETLMRACRQLALGMDPAPITPRP
Ga0187765_109121561	3300018060	Tropical Peatland	QPRQEDHEQGCEAFIRAIRVMRYVDELKRSASESAVAWGRTRRQRRYLRGSAKKLSVAACESDPAAAISDLGNLYEAECQGRGKRGTSFEETEMAETLMLACRQLAIGQDPAPVTPRPG
Ga0210388_100271474	3300021181	Soil	MRYVDELNRSASEAGVGWGRTWRRRYLRENAKKLSAAACASDPIAAISALRDVYQAECQTRGKLSEKRDLAETLMRACQQMVLGRDPAPITDRPR
Ga0210402_101353482	3300021478	Soil	MRYVDELKRSASESARAWGATRWRWKYLRENAKKLTVAACESDPVSAVSALGGRYEAECQTGGKRAGRAEKMKMAETLMLACRQLALGQDPALP
Ga0126371_110678341	3300021560	Tropical Forest Soil	QEDHEQGCEVFILAMRIMRYVDELERSASESAAPWGRDRQRRKYLRESAKKLSATACTSDPVAALGTLGGLYKAEYQPPGKRVKKPEKAQMAEMLMLACGQLALGKDPAPITGENSLD
Ga0233357_10525031	3300023056	Soil	MRIMRYVDELKQSASESAGAWGATRWRRKYLRENAKKLTVAACDSDPVSAVSALGVRYEAECQTGGKRADGAEKVKMAETLMLACRQLALGQDPAPLTGRPS
Ga0208717_10319632	3300025574	Arctic Peat Soil	MRYVDELKQSASESAAAWGATRWRRKYLRENAKKLTVAACDSDPVSAISALGVRYEAECQTGGKRVDGAQKTKMAETLMLACRQLALGQDPAPLTGRPS
Ga0208480_10077417	3300025633	Arctic Peat Soil	MRYVDELKQSASESAGAWGATRWRRKYLRENAKKLTVAACDSDPVSAISALGVRYEAECQTGGKRVDGAEKMKMAETLMLACRQLALGQDPAPLTGRPS
Ga0208731_10314132	3300027029	Forest Soil	IRAMRVMRYVDELNRAASESGVGWGRTWRRRYLRQNAKKLSVAACESDPVAAIRALRDVYQAEGQTRGKLSDQRDLAETLMRACQQLVLGRDPAPITPRPR
Ga0209115_10560371	3300027567	Forest Soil	MRIMRYVDELKQSASGSAGAWGATRWRRKYLRESAKKLTVAACDSDPVSAISAMGVRYEAECQMGGKRVEGAEKVKMAETLMLACRQLALGQDPAPLTGRPS
Ga0209178_11884972	3300027725	Agricultural Soil	MRYADEMKRSASESAVVWGRRRRYLRENAKKLSVAACESDPAAAVSALGDLYQAECQTPGKRVKLSEKTAMAETLMRACRQLALGQDPAPITSRPL
Ga0209040_100136968	3300027824	Bog Forest Soil	MRYVDELNRAASESGVGWGRTWRRRYLRESAKRLSVAACESDPVAAIGALRDVYQAEGQTRGKLSDQRDLAETLMRACQQLVLGRDPVPITPRPR
Ga0209693_101326282	3300027855	Soil	MRYVDELKRSASESAGAWGAARWRRKQLRENAKKLTVAACDSDPVSAISALGVRYEAECQTGGERAGEAENKKMAETLMLACRQLALGRDPAPLTGRPS
Ga0209006_100457702	3300027908	Forest Soil	MRYVDELKQSASESAGAWGSTRWRRKYLRENAKKLTVAACDSDPVSAISALGARYEAECQTGGKRVDGAEKMKMAETLMLACRQLALGQDPAPLTGRPS
Ga0308309_115845931	3300028906	Soil	QSASGSAGAWGATRWRRKYLRESAKKLTVAACDSDPVSAISALGVRYEAECQMGGKRVEGAEKVKMAETLMLACRQLALGQDPAPLTGRPS
Ga0210277_101491791	3300030528	Soil	GWGRTWRRRYLRENAKVLSLAACESDPVAAISALSDVYQAECQTRGKLSEKREMAETLMRACQQLVLGRDPAPITARPR
Ga0210268_10045952	3300030629	Soil	MRYVDELNRSASESGVGWGRTWRRRYLRENAKVLSLAACESDPVAAISALSDVYQAECQTRGKLSEKREMAETLMRACQQLVLGRDPAPITARPR
Ga0265459_100186983	3300030741	Soil	MRYVGELNRSASESGVGWGRTWRRRYLRENAKVLSWAACESDPVAAISALSDVYQAECQTRGKLSEKREMAETLMRACQQLVLGRDPAPITARPR
Ga0265746_10611611	3300030815	Soil	MRIMRYVDELKQSASGSAGAWGATRWRRKYLRESAKKLTVAACDSDPVSAISALGVRYEAECQTGGKRADAAEKVKMAETLMLACRQLALGQDPAPLTGRPS
Ga0170824_1037505182	3300031231	Forest Soil	MRYVDELKRSASESAGAWGATRWRWKYLRENAKKLSVAACESDPVSAVSALGGRYEAECQTGGKRVGRAEKMQMAETLMLACRQLALGQDPALP
Ga0318541_105881622	3300031545	Soil	RYVDELKRSASQSAALWGRGRRRRKYLRENAEKLTVAACTSDPAAALKTLGDLYKAECQAPDQRAKSLEKAEMAEMMMQACGQLALGKDPAPIAGEHPH
Ga0318561_102417802	3300031679	Soil	FRAMRYADELKRSASESAGTWIRTRRWRSYVRDGAKKLSVAACESDPAAAISALGHSYQAQCSTSSKRGKAAEQTEMAKMLMQACRQLALGQNPAPIARPM
Ga0310686_1042297742	3300031708	Soil	MRYVDELNRSASESGVGWGRTWRRRYLRQNAKKLSVAACESDPVAAIRALRDVYQAEGQTRGKLSDQRDLAETLMRACQQLVLGRDPAPITPRPR
Ga0310686_1046596442	3300031708	Soil	KRSASEPAGSWRKTRRRRKYLRDGAKRLSVVACEPDPAAAASALGELYQAECQTPGKRARAAERTEMAETLMRACRRLGAGQDPAPITLRPA
Ga0310686_1047812992	3300031708	Soil	MRIMRYVDELKQSASESAGGWGATRWRRKYLRESAKKLTVAACDSDPVSAVSALGVRYEAECQTGGKRVDGAEKVKMAETLMLACRQLALGQDPAPLPSRPS
Ga0307474_103270941	3300031718	Hardwood Forest Soil	AWDRAWRRRYLRANAQKLSTAACASDPVAATSVLADLYEAECQPSGKRAKSPEKTEMAETLMRACQQLALGQDPAPITPRHR
Ga0318548_103758452	3300031793	Soil	RVMRYVDELKRSASESAALWGRGRRRRKYLRENAKKLSVTACTSDPVAALGALADLYQAEYQKPGKRAKMPEMAEMLMRACRQLALGKDPAPITRANSLDLNP
Ga0318565_104924461	3300031799	Soil	KRSASESAVVWGRTWRRRYLRASAKRLSVAACESDPVAAVSALADGYQAECQTPGNRVNLAEKTELAETLMRACRQLALGQDPAPITSHP
Ga0318497_107290981	3300031805	Soil	EDHEQGCEVFVTAMRVMRYADELNRSASQSTALWGRGRRRRKYLRENAKKLSVAACTSDPVVALRTLGDLYKAEDLAPGRRAKSPDKAEMAEMLVRACGQLAQGKDPAPITGENSL
Ga0318563_104122802	3300032009	Soil	LKRSASESAAVWGRGRRRRKYLRENAKKLSMTACTSDPVAALGALADLYQAEYQKPGKRAKMPEMAEMLMRACRQLALGKDPAPITRANSLDLNP
Ga0311301_101094681	3300032160	Peatlands Soil	MRYVDELKRSASESAVAWGRTWRRRYLRENAKKLSVAACESDPVAAIGALGDLYQAECDTRGKRVTSSEKTEMAETLMLACRQLALGQDPAPITRRPR
Ga0311301_110765481	3300032160	Peatlands Soil	MRYVDELNRAASESGVGWGGTWRRRYLRENAKKLSVAACESDPVAAISALRDVYQAECQTRGKLSDQRDLTETLMRACQQLVLGRDPAPITPRPR
Ga0335079_100099227	3300032783	Soil	MRYADELKRCASESAGAWGPARRRRKYLRENAKKLTVAACESDPVSAISALAAVYRAECEAGGGRADGAEQMKMAETLMLACHQLALGQDPAPLTARPW
Ga0335080_102745131	3300032828	Soil	MRYADELKRCASESAGAWGPARRRRKYLRENAKKLTVAACESDPVSAISALAAVYRAECEAGGGRADGAEQMKMAETLMLACHQLALGQ
Ga0335074_100347994	3300032895	Soil	MRYVDELNRSASQSPVAWGRTWRRRYLRENAKKLSAAACESDPVAAISALRDLYQAECQTRGKFSEKREMTETLMRACQQLVLGRDPAPITPRPG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F068199

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences