Metagenome / Metatranscriptome Family F068177

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F068177
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	61 residues
Representative Sequence	MPNSDSEELRAELLSLLDKQFEVLELSTCVTLTDEEKREYEARKQRIHELFKQLGTFRAAA
Number of Associated Samples	90
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	22.58 %
% of genes near scaffold ends (potentially truncated)	33.60 %
% of genes from short scaffolds (< 2000 bps)	90.40 %
Associated GOLD sequencing projects	79
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (85.600 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (31.200 % of family members)
Environment Ontology (ENVO)	Unclassified (58.400 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (60.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 83.61% β-sheet: 0.00% Coil/Unstructured: 16.39%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF01740	STAS	2.40
PF03631	Virul_fac_BrkB	1.60
PF03301	Trp_dioxygenase	1.60
PF00903	Glyoxalase	1.60
PF00072	Response_reg	0.80
PF00196	GerE	0.80
PF12844	HTH_19	0.80
PF01435	Peptidase_M48	0.80
PF07724	AAA_2	0.80
PF00589	Phage_integrase	0.80
PF01344	Kelch_1	0.80
PF06452	CBM9_1	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	1.60
COG3483	Tryptophan 2,3-dioxygenase (vermilion)	Amino acid transport and metabolism [E]	1.60

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.40 %
Unclassified	root	N/A	13.60 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.40 %
Unclassified	root	N/A	13.60 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	85.60 %
Unclassified	root	N/A	13.60 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	0.80 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	80.80 %
Unclassified	root	N/A	13.60 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.80 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	0.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	72.80 %
Unclassified	root	N/A	13.60 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.80 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	0.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	72.80 %
Unclassified	root	N/A	13.60 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.80 %
unclassified Thaumarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota	0.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	72.80 %
Unclassified	root	N/A	13.60 %
Thaumarchaeota archaeon 13_1_40CM_4_48_7	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon 13_1_40CM_4_48_7	0.80 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002557\|JGI25381J37097_1026523	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1002	Open in IMG/M
3300002558\|JGI25385J37094_10151291	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M
3300002908\|JGI25382J43887_10139865	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1241	Open in IMG/M
3300002908\|JGI25382J43887_10498695	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	515	Open in IMG/M
3300002909\|JGI25388J43891_1002860	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3569	Open in IMG/M
3300002911\|JGI25390J43892_10011945	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2034	Open in IMG/M
3300005166\|Ga0066674_10458432	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300005167\|Ga0066672_10756150	Not Available	616	Open in IMG/M
3300005172\|Ga0066683_10276795	All Organisms → cellular organisms → Bacteria → Proteobacteria	1042	Open in IMG/M
3300005172\|Ga0066683_10549253	All Organisms → cellular organisms → Bacteria → Acidobacteria	704	Open in IMG/M
3300005174\|Ga0066680_10861122	Not Available	540	Open in IMG/M
3300005175\|Ga0066673_10671408	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	598	Open in IMG/M
3300005178\|Ga0066688_10334549	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	979	Open in IMG/M
3300005180\|Ga0066685_10870277	Not Available	605	Open in IMG/M
3300005180\|Ga0066685_11017158	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546	Open in IMG/M
3300005181\|Ga0066678_10305328	Not Available	1042	Open in IMG/M
3300005181\|Ga0066678_10386731	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	926	Open in IMG/M
3300005181\|Ga0066678_10937525	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	564	Open in IMG/M
3300005181\|Ga0066678_10970289	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	552	Open in IMG/M
3300005186\|Ga0066676_10172443	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1374	Open in IMG/M
3300005435\|Ga0070714_101997022	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566	Open in IMG/M
3300005445\|Ga0070708_100845587	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	860	Open in IMG/M
3300005450\|Ga0066682_10583177	All Organisms → cellular organisms → Bacteria → Acidobacteria	704	Open in IMG/M
3300005467\|Ga0070706_100179968	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1974	Open in IMG/M
3300005467\|Ga0070706_100354522	All Organisms → cellular organisms → Bacteria	1367	Open in IMG/M
3300005467\|Ga0070706_100610179	Not Available	1014	Open in IMG/M
3300005467\|Ga0070706_102109281	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510	Open in IMG/M
3300005518\|Ga0070699_101419596	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	637	Open in IMG/M
3300005536\|Ga0070697_100212915	Not Available	1645	Open in IMG/M
3300005536\|Ga0070697_100296462	Not Available	1389	Open in IMG/M
3300005536\|Ga0070697_101236739	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666	Open in IMG/M
3300005536\|Ga0070697_101788781	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	550	Open in IMG/M
3300005555\|Ga0066692_10363540	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	918	Open in IMG/M
3300005555\|Ga0066692_10857051	Not Available	557	Open in IMG/M
3300005555\|Ga0066692_11026378	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300005557\|Ga0066704_10557183	Not Available	745	Open in IMG/M
3300005558\|Ga0066698_10676120	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	684	Open in IMG/M
3300005559\|Ga0066700_10480168	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	869	Open in IMG/M
3300005559\|Ga0066700_11153784	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	505	Open in IMG/M
3300006032\|Ga0066696_10361907	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	946	Open in IMG/M
3300006046\|Ga0066652_100332304	Not Available	1361	Open in IMG/M
3300006163\|Ga0070715_10455672	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	723	Open in IMG/M
3300006173\|Ga0070716_101684867	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	523	Open in IMG/M
3300006173\|Ga0070716_101803399	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300006797\|Ga0066659_11603125	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	547	Open in IMG/M
3300006797\|Ga0066659_11877291	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	508	Open in IMG/M
3300006800\|Ga0066660_10965758	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	688	Open in IMG/M
3300006800\|Ga0066660_11434444	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → unclassified Thaumarchaeota → Thaumarchaeota archaeon 13_1_40CM_4_48_7	542	Open in IMG/M
3300006852\|Ga0075433_11335305	Not Available	621	Open in IMG/M
3300006854\|Ga0075425_100737194	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1131	Open in IMG/M
3300006854\|Ga0075425_101475284	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	768	Open in IMG/M
3300006903\|Ga0075426_10621841	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	807	Open in IMG/M
3300006914\|Ga0075436_101163250	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582	Open in IMG/M
3300009012\|Ga0066710_100326779	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2258	Open in IMG/M
3300009012\|Ga0066710_100958087	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1319	Open in IMG/M
3300009090\|Ga0099827_10017560	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4871	Open in IMG/M
3300009137\|Ga0066709_104126404	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300010322\|Ga0134084_10423602	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300010329\|Ga0134111_10456152	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300010335\|Ga0134063_10222086	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	893	Open in IMG/M
3300010336\|Ga0134071_10134655	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1195	Open in IMG/M
3300010336\|Ga0134071_10749667	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300012202\|Ga0137363_10107137	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2135	Open in IMG/M
3300012205\|Ga0137362_11228348	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
3300012206\|Ga0137380_10474386	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1104	Open in IMG/M
3300012207\|Ga0137381_10444140	Not Available	1132	Open in IMG/M
3300012207\|Ga0137381_10620987	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	941	Open in IMG/M
3300012211\|Ga0137377_11028187	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	754	Open in IMG/M
3300012350\|Ga0137372_10281413	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1296	Open in IMG/M
3300012351\|Ga0137386_10369959	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1032	Open in IMG/M
3300012354\|Ga0137366_10310952	Not Available	1158	Open in IMG/M
3300012359\|Ga0137385_11056741	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300012362\|Ga0137361_11929946	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300012410\|Ga0134060_1309224	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	896	Open in IMG/M
3300012917\|Ga0137395_10553050	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	830	Open in IMG/M
3300012923\|Ga0137359_10411920	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1198	Open in IMG/M
3300012923\|Ga0137359_11371279	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300012976\|Ga0134076_10187253	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	863	Open in IMG/M
3300014150\|Ga0134081_10022506	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1783	Open in IMG/M
3300014154\|Ga0134075_10099446	All Organisms → cellular organisms → Bacteria	1228	Open in IMG/M
3300015359\|Ga0134085_10569677	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	524	Open in IMG/M
3300017656\|Ga0134112_10065356	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1337	Open in IMG/M
3300017656\|Ga0134112_10240849	All Organisms → cellular organisms → Bacteria → Acidobacteria	716	Open in IMG/M
3300017657\|Ga0134074_1352219	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543	Open in IMG/M
3300017659\|Ga0134083_10350115	Not Available	636	Open in IMG/M
3300018431\|Ga0066655_10744783	All Organisms → cellular organisms → Bacteria → Acidobacteria	665	Open in IMG/M
3300018433\|Ga0066667_10149508	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1645	Open in IMG/M
3300018433\|Ga0066667_11849677	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300018433\|Ga0066667_12060326	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	526	Open in IMG/M
3300018468\|Ga0066662_10209920	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1549	Open in IMG/M
3300018468\|Ga0066662_12768030	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300020170\|Ga0179594_10121274	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	953	Open in IMG/M
3300020170\|Ga0179594_10142503	All Organisms → cellular organisms → Bacteria → Acidobacteria	883	Open in IMG/M
3300025905\|Ga0207685_10100990	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1233	Open in IMG/M
3300025910\|Ga0207684_10193778	All Organisms → cellular organisms → Bacteria → Acidobacteria	1753	Open in IMG/M
3300025910\|Ga0207684_10194271	All Organisms → cellular organisms → Bacteria	1751	Open in IMG/M
3300025910\|Ga0207684_10300176	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1385	Open in IMG/M
3300025910\|Ga0207684_11653277	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517	Open in IMG/M
3300025915\|Ga0207693_10868485	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	693	Open in IMG/M
3300025922\|Ga0207646_10753513	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	869	Open in IMG/M
3300025922\|Ga0207646_11546740	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300025939\|Ga0207665_10203453	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1444	Open in IMG/M
3300026277\|Ga0209350_1008802	All Organisms → cellular organisms → Bacteria → Acidobacteria	3335	Open in IMG/M
3300026295\|Ga0209234_1053140	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1539	Open in IMG/M
3300026296\|Ga0209235_1089717	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1349	Open in IMG/M
3300026297\|Ga0209237_1183600	Not Available	713	Open in IMG/M
3300026301\|Ga0209238_1224990	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	553	Open in IMG/M
3300026309\|Ga0209055_1007372	All Organisms → cellular organisms → Bacteria → Acidobacteria	6121	Open in IMG/M
3300026309\|Ga0209055_1175856	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	668	Open in IMG/M
3300026317\|Ga0209154_1007537	All Organisms → cellular organisms → Bacteria	5461	Open in IMG/M
3300026324\|Ga0209470_1040107	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2323	Open in IMG/M
3300026327\|Ga0209266_1059690	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1827	Open in IMG/M
3300026334\|Ga0209377_1341243	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	504	Open in IMG/M
3300026342\|Ga0209057_1037378	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2455	Open in IMG/M
3300026527\|Ga0209059_1185481	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	716	Open in IMG/M
3300026528\|Ga0209378_1050395	All Organisms → cellular organisms → Bacteria → Acidobacteria	2025	Open in IMG/M
3300026550\|Ga0209474_10717215	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519	Open in IMG/M
3300027548\|Ga0209523_1041044	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	941	Open in IMG/M
3300027748\|Ga0209689_1089910	All Organisms → cellular organisms → Bacteria → Acidobacteria	1607	Open in IMG/M
3300027748\|Ga0209689_1257943	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	706	Open in IMG/M
3300031820\|Ga0307473_10295645	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1016	Open in IMG/M
3300032180\|Ga0307471_101557743	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	818	Open in IMG/M
3300032205\|Ga0307472_100466302	Not Available	1078	Open in IMG/M
3300032205\|Ga0307472_102348729	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	540	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	96.00%
Host-Associated	Host-Associated	4.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.00%
Plants	Host-Associated → Plants	4.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.00%
Loam	Environmental → Terrestrial → Soil → Loam	20.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.00%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	47.20%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	18.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.20%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	31.20%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	17.60%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	16.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	14.40%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	11.20%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.00%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.20%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300002558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300002909	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005181	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_127	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012410	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300014150	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026277	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026295	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026317	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)	Environmental	Open in IMG/M
3300026324	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125 (SPAdes)	Environmental	Open in IMG/M
3300026327	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132 (SPAdes)	Environmental	Open in IMG/M
3300026334	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141 (SPAdes)	Environmental	Open in IMG/M
3300026342	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027548	Forest soil microbial communities from Davy Crockett National Forest, Groveton, Texas, USA - Texas A ecozone_OM3H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI25381J37097_10265234	3300002557	Grasslands Soil	MPNSDSEELRAELLSLLDKQXEVLELSTCVTLTDEEKXEYEARKQRIHELFKQLGTFRAAA*
JGI25385J37094_101512911	3300002558	Grasslands Soil	MPNSDSEELRAELLSLLDKQFEVLELSTCVTLTDEEKREYEARKQRIHELFKQLGTFRAAA*
JGI25382J43887_101398651	3300002908	Grasslands Soil	DSEELRAELLSLLDKQFEVLELSTCVTLTDEEKREYEARKQRIHELFKQLGTFRAAA*
JGI25382J43887_104986951	3300002908	Grasslands Soil	VMPNSDSEELRAELLSLLDKQLEVLELSGYVTLTDEEQHEYEARKQRIHELLRQLGTFRAAA*
JGI25388J43891_10028602	3300002909	Grasslands Soil	MPNSDSEELRAELLSLLDKQFEVLELSTCVTLTDEEKXEYEAXKQRIHELFKQLGTFRAAA*
JGI25390J43892_100119454	3300002911	Grasslands Soil	MPNSDSEELRAELLSLLDKQFEVLELSTCVTLTDEEKPEYEARKQRIHELFKQLGTFRAAA*
Ga0066674_104584321	3300005166	Soil	MPNSDSEELRAELLSLLDKQFEVLELSTCVTLTDEEQREYDERKQRIHELLEQLDTFRAAA*
Ga0066672_107561501	3300005167	Soil	MPNSDSEDLRADLLSLLDQQLEVLELSACVPLTNEEQREYDARKQRIHELLKQLGTFRAAA*
Ga0066683_102767953	3300005172	Soil	MPNSDSEELRAELLSLLDKQFEVLELSTCVTLTDEEKREYEARKQRIHELFKQLGTFKAAA*
Ga0066683_105492531	3300005172	Soil	MPNSDSEDLRADLLSLLDQQLEVLELSACVPLTNEEQREYDARKQRIHELLKQLSTFRAAA*
Ga0066680_108611222	3300005174	Soil	MPNSDSDDLRADLLSLLDKQLEVLELSACVPLTNEEQREYDARKQRIHELLKQLGTFRAAA*
Ga0066673_106714082	3300005175	Soil	GCVMPNSDSEELRAELLSLLDKQLEVMELSGYVTLADEEWREYDARKQRIHELVQTARHV
Ga0066688_103345493	3300005178	Soil	MPNSDSEELRAELLSLLDKQLEVMELSAYVTLTEDEWREYDARKQRIHELFKQQGTLGAAA*
Ga0066685_108702772	3300005180	Soil	MPNSDSEELRAELLSLLDKQLEVLELSGYVTLTDEEQREYDARKQRIHELLRQLGTFTAAA*
Ga0066685_110171583	3300005180	Soil	MLTLDSEELRAELHSLLAKQLDVLGLSARVPLTDEEQREYEARKQHIYELFKQLGTFRAWNSSCLF*
Ga0066678_103053282	3300005181	Soil	MLTLDSEELRAEVHSLLARQLEVLEFSARLPLTAEEQREYEARKHRIYEVFKQLSTFKAAA*
Ga0066678_103867311	3300005181	Soil	HFAHAGCVMPNSDSEELRAELLSLLDKQLEVLELSGYVTLTDEEQREYDARKQRIHELLRQLGTFTAAA*
Ga0066678_109375252	3300005181	Soil	HFAHAGCVMPNSDSEELRAELLSLLDKQLEVLELSGYVTLTDEEQHEYEARKQRIHELLRQLGTFRAAA*
Ga0066678_109702891	3300005181	Soil	MPNSDSEELRAELLSLLDKQLEVMELSAYVTLTEDEWREYDARKQRIHELFKQLDTLGAAA*
Ga0066676_101724432	3300005186	Soil	MPNSDSEELRAELLSLLDKQFEVLKLSTCVTLTDEEQREYDERKQRIHELLEQLDTFRAAA*
Ga0070714_1019970221	3300005435	Agricultural Soil	MPNSDSEELRAELLSLLDKQFEVLELSTCVTLTDEEQREYEARKQRIYELFKQLGTLKAAA*
Ga0070708_1008455872	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MPNSDSEELRAELLSLLDKQFEILELSACVTLTDEEQREYDARKQRIHELFKQLGTFRAAA*
Ga0066682_105831771	3300005450	Soil	MPNSDSEDLRADLLSLLDQQLEVLELSACVPLTNEEQREYDARKQRIHELLKQLDTFRAAA*
Ga0070706_1001799682	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MPNSDSEGLRAEILGLLDKQLEVLELSDCVTLTDEEQREYHARKQRIHELARQLGTLGAAA*
Ga0070706_1003545221	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MPNSDSEAEELRAELLSLLDKQLEVLELSACVTLTDQEKREYEARKQRIYELFKQLGTFRAAA*
Ga0070706_1006101792	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSNSDSEELRAELLSLLDKQLQVLELSGYVTLTDEEWREFDARKQRIYELFKQLGTFRAAA*
Ga0070706_1021092812	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MSNSDDSEELRAELLRLLDKQFEILELSTCVTLTDEEQREYEVRKQRIHELFKQLGTFGAAA*
Ga0070699_1014195961	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MPNSDSEELRAELLSLLDKQFEVLELSTGVTLIDEEKREYEARKQRIHELFKQLGTFRAAA*
Ga0070697_1002129155	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MPNSDSEELRAELLSLLDKQLEVLELSACVTLTDQEKREYEARKQRIYELFKQLGTFRAAA*
Ga0070697_1002964623	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MPNSDSEELRAELLSLLDKQLEVLDLSDYVTLTDEEWREYEARKQRIHELFKQLGTFRAAA*
Ga0070697_1012367392	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MPNSDSEELRAELLSLLDKQFEVLELSTCVTLTDEERREYEARKQRLYELFKQLGTLRAAA*
Ga0070697_1017887812	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LLPSEQRHFAHAGCVMPYSDSEGLRAEILGLLDKQLEVLELSDCVTLTDEEQREYHARKQRIHELARQLGTLGAAA*
Ga0066692_103635401	3300005555	Soil	MPLCSCGVCHANSDSEELRAKLLSLLDKQFEVLELSTCVTLTDEEQREYDERKQRIHELLEQLDTFRAAA*
Ga0066692_108570512	3300005555	Soil	CHFAHAGCVMPNSDSEELRAELLSLLDKQLEVLELSGYVTLTDEEQREYDARKQRIHELLRQLGTFTAAA*
Ga0066692_110263781	3300005555	Soil	DSEELRAELHSLLAKQLDVLGLSARVPLTDEEQREYEARKQHIYELFKQLGTFRAWNSSCLF*
Ga0066704_105571832	3300005557	Soil	MLTLDSEELRAEVLSLLDKQFEVLELSTCVTLTDEEQREYDERKQRIHELLEQLDTFRAAA*
Ga0066698_106761203	3300005558	Soil	MPNSDSEELRAELLSLLDKQLEVLELSGYVTLTDEEQREYDARKQRIHESLRQLGTFRAAA*
Ga0066700_104801682	3300005559	Soil	VMPNSDSEELRAELLSLLDKQFEVLELSTCVTLTDEEQREYDERKQRIHELLEQLDTFRAAA*
Ga0066700_111537841	3300005559	Soil	CVMPNSDSEELRAELLSLLDKQLEVMELSAYVTLTEDEWREYDARKQRIHELFKQQGTLGAAA*
Ga0066696_103619072	3300006032	Soil	MPNSDSEELRAELLSLLDKQLDVLELSGYVTLTDEEQREYDERKQRIHELLKQLGTFRAAA*
Ga0066652_1003323041	3300006046	Soil	MPNSDSEDLRADLLSLLDQQLEVLELSACVPLTNEEQREYDARKQRIHELLRQLGTFRAAA*
Ga0070715_104556721	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MPNSDDSEELRAELLRLLDKQFEVLELSTCVTLTDEEQPEYEVRKQRIHELFKQLGTLGAAA*
Ga0070716_1016848671	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	RFAVRHFPACAAYSPNATSLTWCVMPNSDSEELRAELLSLLDKQFEVLELSTCVTLTDEEQREYEARKQRIHELFKQLGTFGAAA*
Ga0070716_1018033992	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MPNSDSEELRAELLSLLDKQFEVLELSTGVTLIDEEKREYEARKQRIHELFKQ
Ga0066659_116031251	3300006797	Soil	MPNSDPKELRAELLSLLDKQFDLRELSACVTLTDEEQREYEARKQRIYELFKQLGTFRTVA*
Ga0066659_118772912	3300006797	Soil	MPNSDSEELRAELLSLLDKQLYVLELSGYVTLTDEEQREYDERKQRIHELLK
Ga0066660_109657582	3300006800	Soil	MQLRSRGCVMPNSDSEELRAELLSLLDKQFEVLELSTCVTLTDEEKPEYEARKQRIHELFKQLGTFRAAA*
Ga0066660_114344442	3300006800	Soil	MPNSDSEELRAELLSLLDKQLEVMELSGYVTLADEEWREYDARKQRIHELFKQLGTLGAAA*
Ga0075433_113353051	3300006852	Populus Rhizosphere	MPNSDDSEELRAELLSLLDKQFEVLELSTCVTLTDEERREYGARKQRIYELFKQLGTFRAAA*
Ga0075425_1007371943	3300006854	Populus Rhizosphere	MPNSDDSEELRAELLRPLDKQFEILELSTRVTLTDEEQREYEVRKQRIHELFKQLGTFGAAA*
Ga0075425_1014752842	3300006854	Populus Rhizosphere	MPNSDDSEELRAELLRLLDKQFEILELSTCVTLTDEEQREYEARKQRIYELFKQLGTFRAAA*
Ga0075426_106218411	3300006903	Populus Rhizosphere	SEQRHFAHAGCLMPNSDDSEELRAELLRLLDKQFEILELSTCVTLTDEEQPEYEVRKQRIHELFKQLGTLGAAA*
Ga0075436_1011632502	3300006914	Populus Rhizosphere	MSNSDDSEELRAELLRLLDKQFEILELSTCVTLTDEEQPEYEVRKQRIHELFKQLGTLGAAA*
Ga0066710_1003267794	3300009012	Grasslands Soil	MPNSDSEELRAELLSLLDKQLEVLELSGYVTLTDEEQREYDARKQRIHESLRQLGTFRAA
Ga0066710_1009580872	3300009012	Grasslands Soil	MPNSDSEELRAELLSLLDKQLYVLELSGYVTLTDEEQREYDERKQRIHELLKQLGTFRAA
Ga0099827_100175605	3300009090	Vadose Zone Soil	MPNSDSEELRAELLSLLDKQFEVLELSTCVTLTDEEKREYEASKQRIHELFKQLGTFRAAA*
Ga0066709_1041264041	3300009137	Grasslands Soil	PNSDSEELRAELLSLLDKQFEVLELSTCVTLTDEEKREYEAGKQRIHELFKQLGTFRAAA
Ga0134084_104236021	3300010322	Grasslands Soil	MPNSDSEELRAELLSLLDKQLEVLKLSAYVTLADEEWREFDARKQRICELFKQLGTFRAAA*
Ga0134111_104561522	3300010329	Grasslands Soil	MPNSDSEELRAELLSLLDKQLEVLELSGYVTLTDEEQREYDARKQRIHELLRQLGTF
Ga0134063_102220861	3300010335	Grasslands Soil	MPNSDSEELRAELLSLLDKQLEVMELSGYVTLADEEWREYDARKQRIHELVQTARHV*
Ga0134071_101346551	3300010336	Grasslands Soil	ELRAELLSLLDKQFEVLELSTCVTLTDEEQREYDERKQRIHELLEQLDTFRAAA*
Ga0134071_107496671	3300010336	Grasslands Soil	NSDSEELRAELLSLLDKQFEVLELSTCVTLTDEEKREYEARKQRIHELFKQLGTFRAAA*
Ga0137365_113210072	3300012201	Vadose Zone Soil	MPNSDSEDLRADLLSLLDQQLEVLELSACVPLTNEEQREYDARKQRIH
Ga0137363_101071371	3300012202	Vadose Zone Soil	MPNSDSEELRAELLSILDKQFEVLELSTCVTLTGEEKREYEARKQRIYELVQAARHV*
Ga0137362_112283481	3300012205	Vadose Zone Soil	MPNSDSEELRAELLSLLDKQLEVLELSGYVTLTDEEQHEYEARKQRIHELLRQLGTFRAAA*
Ga0137380_104743862	3300012206	Vadose Zone Soil	MPNSDSEELRAELLSLLDKQFEVLELSACVTLTDEEKPEYEARKQRIHELFKQLGTFRAAA*
Ga0137381_104441402	3300012207	Vadose Zone Soil	MLTLDSEELRAELHSLLAKQLDVLGLSARVPLTDEEQREYEARKQRIYELFKQLGTFRAAA*
Ga0137381_106209872	3300012207	Vadose Zone Soil	MPNSDSEELRAELLSLLDQQLEVLELSAYVTLTDEEQREYEARKQRIHELFKQLGTFRAAA*
Ga0137377_110281871	3300012211	Vadose Zone Soil	MPNSDSEEPRAELLSLLDKQLEVMELSAYVTLTEDEWREYDARKQRIHELFKQLDTLGAAA*
Ga0137372_102814132	3300012350	Vadose Zone Soil	MLTLDSEELRAEVHSLLARQLEVLEFSARVPLTAEEQREYEARKHRIYELFKQLSTFKAAA*
Ga0137386_103699591	3300012351	Vadose Zone Soil	MPNSDSEELRAELLSLLDQQLEVLELSAYVTLTDEEQREYDARKQRIHELFKQLGTFRAAA*
Ga0137366_103109521	3300012354	Vadose Zone Soil	DLRADLLSLLDKQLEVLELSACVPLTNEEQREYDARKQRIHELLKQLGTFRAAA*
Ga0137385_110567411	3300012359	Vadose Zone Soil	TLLTGCVMPNSDSEELRAELLSLLDQQLEVLELSAYVTLTDEEQREYEARKQRIHELFKQLGTFRAAA*
Ga0137361_119299461	3300012362	Vadose Zone Soil	MPNLDSEVLRAELLSLLDKQFEVLELSVCVTLTDEEQRESEARKQRIYELFKQLHTLGAAA*
Ga0134060_13092242	3300012410	Grasslands Soil	MPNSDSEELRAELLSLLDKQLYVLELSGYVTLTDEEQREYDERKQRIHELLEQLDTFRAAA*
Ga0137395_105530502	3300012917	Vadose Zone Soil	MPNSDSEELRAELLSLLDKQLEVLELSGYVTLTDEEQHEYEARKQRIHELFKQLGTFRAAA*
Ga0137359_104119202	3300012923	Vadose Zone Soil	MPNSDSEELRAELLSLLDKQLEVLELSGYVTLTDEEQREYDARKQRIHELLKQLGTFRAAA*
Ga0137359_113712792	3300012923	Vadose Zone Soil	MPLCSCGVCHANSDSEELRAKLLSLLDKQFEVLELSTCVTLTDEEEREYEARKQRIYELV
Ga0134076_101872531	3300012976	Grasslands Soil	LLSLLDKQFEVLELSTCVTLTDEEQREYDERKQRIHELLEQLDTFRAAA*
Ga0134081_100225063	3300014150	Grasslands Soil	SDSEELRAELLSLLDKQFEVLELSTCVTLTDEEKREYEASKQRIHELFKQLGTFRAAA*
Ga0134075_100994464	3300014154	Grasslands Soil	MPNSDSEELRAELLSLLDKQLEVLELSGYVTLTDEEQREYDARKQRIHELL
Ga0134085_105696771	3300015359	Grasslands Soil	MPNSDSEELRAELLSLLDKQLEVLELSGYVTLTDEEQREYDERKQRIHELLEQLDT
Ga0134112_100653561	3300017656	Grasslands Soil	MPDSDSEELRAELLSLLDKQLEVLELSGYVTLTDEEQREYDERKQRIHELLEQLDTFRAA
Ga0134112_102408492	3300017656	Grasslands Soil	MPNSDSEELRAELLSLLDKQLEVLELSACVPLTNEEQREYDARKQRIHELLRQLGTFTAA
Ga0134074_13522191	3300017657	Grasslands Soil	MPNSDSEDLRADLLSLLDQQLEVLELSACVPLTNEEQREYDARKQRIHELLKQLSTFRAA
Ga0134083_103501151	3300017659	Grasslands Soil	ELLSLLDKQLEVLELSGYVTLTDEEQREYDARKQRIHELLEQLDTFRAAA
Ga0066655_107447832	3300018431	Grasslands Soil	MPNSDSEDLRADLLSLLDQQLEVLELSACVPLTNEEQREYDARKQRIHELLKQLGTFRAA
Ga0066667_101495081	3300018433	Grasslands Soil	IHFHLNNATSLAGCVMPNSDSEELRAELLSLLDKQFEVLELSTCVTLTDEEQREYDERKQRIHELLEQLDTFRAAA
Ga0066667_118496771	3300018433	Grasslands Soil	MPNSDPKELRAELLSLLDKQFDLRELSACVTLTDEEQREYEARKQRIYELFKQLGTFRTV
Ga0066667_120603261	3300018433	Grasslands Soil	NSDSEELRAELLSLLDKQLDVLELSGYVTLTDEEQREYDERKQRIHELLKQLGTFRAAA
Ga0066662_102099202	3300018468	Grasslands Soil	MPNSDSDDLRADLLSLLDKQLEVLELSACVPLTNEEQREYDARKQRIHELLKQLGTFRAA
Ga0066662_127680301	3300018468	Grasslands Soil	ATSLNAGCVMPNSDFKELRAELLSLLDKQFDLQELSVCVTLTDEEKREYEARKQRIYELFKQLGTFRTVA
Ga0179594_101212742	3300020170	Vadose Zone Soil	MPNSDSEELRAELLSLLDKQFEVLELSTCVTLTDEEKREYEARKQRIHELFKQLGTFRAA
Ga0179594_101425031	3300020170	Vadose Zone Soil	MPNSDSEDLRADLLSLLDQQLEVLELSACVPLTNEEQREYDARKQRIHEL
Ga0207685_101009902	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MPNSDDSEELRAELLRLLDKQFEVLELSTCVTLTDEEQREYEVRKQRIHELFKQLGTLGAAA
Ga0207684_101937783	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPNSDSEAEELRAELLSLLDKQLEVLELSACVTLTDQEKREYEARKQRIYELFKQLGTFRAAA
Ga0207684_101942713	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MPNSDSEELRAELLSLLDKQLEVLDLSDYVTLTDEEWREYEARKQRIHELFKQLGTFRAA
Ga0207684_103001762	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MSNSDSEELRAELLSLLDKQLQVLELSGYVTLTDEEWREFDARKQRIYELFKQLGTFRAA
Ga0207684_116532772	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	RELRAELLRRLDKQFEILELSTCVTLTDEEQREYEVRKQRIHELFKQLGTFGAAA
Ga0207693_108684852	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	LHLNNATSLTRGCVMPNSDSKELRAELLSLLDKQLEVLELSACATLTDEEQREYEARKQRIYELFKQLGTFRAAA
Ga0207646_107535132	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MPNSDDSEELRAELLRLLDKQFEILELSTCVTLTDEEQGEYEVRKQRIYELFKQLGT
Ga0207646_115467401	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MPNSDSEELRAELLSLLDKQFEILELSACVTLTDEEQREYDARIQRIHELFKQLG
Ga0207665_102034531	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MPNSDSEELRAELLSLLDKQFEVLELSTCVTLTDEEQREYEARKQRIHELFKQLGTFGAA
Ga0209350_10088026	3300026277	Grasslands Soil	MQLRSRGCVMPNSDSEELRAELLSLLDKQFEVLELSTCVTLTDEEKPEYEARKQRIHELFKQLGTFRAAA
Ga0209234_10531403	3300026295	Grasslands Soil	MPNSDSEELRAELLSLLDKQFEVLELSTCVTLTDEEKPEYEARKQRIHELFKQLGTFRAA
Ga0209235_10897174	3300026296	Grasslands Soil	MPNSDSEELRAELLSLLDKQLEVLELSGYVTLTDEEQREYDARKQRIHELLRQLGTFTAA
Ga0209237_11836002	3300026297	Grasslands Soil	MPNSDSDDLRADLLSLLDQQLEVLELSACVPLTNEEQREYDARKQRIHELLKQLGTFRAA
Ga0209238_12249902	3300026301	Grasslands Soil	RGCVMPNSDSEELRAELLSLLDKQFEVLELSTCVTLTDEEKPEYEARKQRIHELFKQLGTFRAAA
Ga0209055_10073728	3300026309	Soil	MHRLQSLMQLRSRGCVMPNSDSEELRAELLSLLDKQFEVLELSTCVTLTDEEKREYEARKQRIHELFKQLGTFRAAA
Ga0209055_11758562	3300026309	Soil	MPNSDSEELRAELLSLLDKQLEVMELSAYVTLTEDEWREYDARKQRIHELFKQQGTLGAA
Ga0209154_10075377	3300026317	Soil	MPNSDSEELRAELLSLLDKQFEVLELSTCVTLTDEEKREYEASKQRIHELFKQLGTFRAA
Ga0209470_10401071	3300026324	Soil	MPNSDSEELRAELLSLLDKQFEVLKLSTCVTLTDEEQREYDERKQRIHELLEQLDTFRAA
Ga0209266_10596902	3300026327	Soil	MPNSDSEELRAELLSLLDKQFEVLELSTCVTLTDEEQREYDERKQRIHELLEQLDTFRAA
Ga0209377_13412431	3300026334	Soil	SEELRAELLSLLDKQFEVLELSTCVTLTDEEQREYDERKQRIHELLEQLDTFRAAA
Ga0209057_10373782	3300026342	Soil	MLTLDSEELRAELHSLLAKQLDVLGLSARVPLTDEEQREYEARKQHIYELFKQLGTFRAWNSSCLF
Ga0209059_11854812	3300026527	Soil	MPNSDSEELRAELLSLLDKQLEVMELSGYVTLADEEWREYDARKQRIHELVQTARHV
Ga0209378_10503952	3300026528	Soil	MPNSDSDDLRADLLSLVDKQLEVLELSACVPLTNEEQREYDARKQRIHELLKQLGTFRAA
Ga0209474_107172151	3300026550	Soil	HFHLNNATSTGCVMPNSDSEELRAELLSLLDKQLYVLELSGYVTLTDEEQREYDERKQRIHELLKQLGTFRAAA
Ga0209523_10410442	3300027548	Forest Soil	MPNSDSEELRAELLSLLDNQFEVLELSTCVTLIDEEKREYEARKQRIHELFKQLGTFRAA
Ga0209689_10899102	3300027748	Soil	MPNSDSEELRAELLSLLDKQFEVLELSTCVTLTDEEKREYEARKQRIHELFKQLGTFKAA
Ga0209689_12579431	3300027748	Soil	MPNSDSDDLRADLLSLLDKQLEVLELSACVPLTNEEQREYDARKQRIHELLKQLGTFRA
Ga0307473_102956452	3300031820	Hardwood Forest Soil	MPNSDSEELREELLSLLDKQFEVLELSTCVTLTDEEQREYEARKQRIYELFKQLGTFRAA
Ga0307471_1015577433	3300032180	Hardwood Forest Soil	MPNSDSEELRAELLNLLDKQFEVLELSTCVTLTDEEKREYEARKQRIHELFKQLGTFRAA
Ga0307472_1004663021	3300032205	Hardwood Forest Soil	DDSEELRAELLRLLDKQFEILELSSCKTLTDEEQREYEVRKRRIHELFKQLGTFEAAA
Ga0307472_1023487291	3300032205	Hardwood Forest Soil	MPNSDDSEELRAELLRLLDKQFEILELSTCVTLTDEEQGEYEVRKQRIYELFKQL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F068177

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences