NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F068157

Metagenome / Metatranscriptome Family F068157

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F068157
Family Type Metagenome / Metatranscriptome
Number of Sequences 125
Average Sequence Length 79 residues
Representative Sequence ADRGSGWNLAATPSPRALSRLKTLPLARLLRQAGHTDRVIKGLAAGDAWSALTGLTGSLAGALQATADSGRVAQ
Number of Associated Samples 105
Number of Associated Scaffolds 125

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 98.40 %
% of genes from short scaffolds (< 2000 bps) 92.80 %
Associated GOLD sequencing projects 98
AlphaFold2 3D model prediction Yes
3D model pTM-score0.60

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (58.400 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(15.200 % of family members)
Environment Ontology (ENVO) Unclassified
(25.600 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(54.400 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      
Full Alignment
Alignment of all the sequences in the family.
Sorting
Filter
Selection
Vis.elements
Color scheme
Extras
Export
Help

IDLabel
.2.4.6.8.10.12.14.16.18.20.22.24.26.28.30.32.34.36.38.40.42.44.46.48.50.52.54.56.58.60.62.64.66.68.70.72.74.76.78.80.82.84.86.88.90.92.94.96.98.100.102.104.106.108.110.112.114.116
1JGI12694J13545_10174041
2JGIcombinedJ26739_1004405583
3JGIcombinedJ26739_1005759023
4JGIcombinedJ26739_1012183032
5Ga0062385_111693462
6Ga0062384_1004785222
7Ga0062384_1009083811
8Ga0062384_1011448801
9Ga0062384_1013748292
10Ga0062387_1011389232
11Ga0062386_1010725851
12Ga0070734_107706051
13Ga0070764_106816342
14Ga0070766_111349682
15Ga0066788_102163582
16Ga0080026_100344993
17Ga0080027_101977662
18Ga0070715_108675732
19Ga0075522_102212312
20Ga0073928_105240772
21Ga0099794_103188401
22Ga0099830_106228651
23Ga0099828_111523081
24Ga0105240_104456033
25Ga0116229_106290412
26Ga0116230_110868831
27Ga0116225_13691082
28Ga0116220_102853812
29Ga0105854_13785002
30Ga0116216_105868621
31Ga0116226_114834242
32Ga0116226_117707142
33Ga0099796_100733813
34Ga0074046_100960144
35Ga0136449_1027587962
36Ga0126361_104659762
37Ga0137399_101487264
38Ga0137413_106160971
39Ga0137413_112858662
40Ga0137416_102392284
41Ga0181537_100048971
42Ga0182013_106740642
43Ga0182021_105883391
44Ga0181536_103202651
45Ga0167639_10419231
46Ga0167638_10590222
47Ga0137412_111558202
48Ga0137403_107551472
49Ga0137403_113916611
50Ga0187879_100330166
51Ga0187847_104124341
52Ga0193713_11221081
53Ga0193728_11885142
54Ga0193717_11812622
55Ga0210407_107904762
56Ga0210407_108141491
57Ga0210407_108373711
58Ga0210403_108174221
59Ga0210399_103370623
60Ga0210395_109048352
61Ga0179596_100592551
62Ga0210396_101479885
63Ga0210396_108086751
64Ga0210396_114247321
65Ga0210389_108348632
66Ga0210387_102190741
67Ga0210386_104350983
68Ga0210386_104401843
69Ga0210394_100949301
70Ga0210394_109634352
71Ga0210392_105782312
72Ga0210402_114701901
73Ga0247679_10717121
74Ga0179589_106184032
75Ga0207665_115680411
76Ga0209849_10952591
77Ga0179587_109977291
78Ga0207761_10614581
79Ga0208042_11461572
80Ga0209329_10154261
81Ga0209007_11235822
82Ga0209007_11432152
83Ga0209530_10421753
84Ga0209446_10511283
85Ga0209447_101327072
86Ga0209060_103123781
87Ga0209274_104029262
88Ga0209006_100518246
89Ga0209006_100617391
90Ga0302234_100388915
91Ga0302157_103647471
92Ga0302157_103763252
93Ga0302218_101161022
94Ga0311359_111231761
95Ga0311340_100924366
96Ga0311340_110825962
97Ga0311352_102842413
98Ga0311330_106687192
99Ga0311342_105094973
100Ga0311334_113237751
101Ga0302302_12621452
102Ga0311339_105395883
103Ga0311338_101027156
104Ga0311344_108547362
105Ga0311344_112543932
106Ga0302274_105083721
107Ga0302196_103745591
108Ga0311370_111015101
109Ga0311356_114352961
110Ga0302316_102086331
111Ga0302309_104262401
112Ga0302314_114605992
113Ga0265740_10532641
114Ga0073995_118227541
115Ga0170824_1029378521
116Ga0302307_104245592
117Ga0302324_1024433741
118Ga0302320_105371001
119Ga0302326_128836282
120Ga0307477_101807901
121Ga0307478_101859974
122Ga0307478_116060822
123Ga0335079_110350791
124Ga0316214_10712291
125Ga0370514_103895_495_722
Powered by MSAViewer


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 42.16%    β-sheet: 0.00%    Coil/Unstructured: 57.84%
Feature Viewer
Position :
0
Zoom :
x 1
+ Add Multiple Variants

Enter the variants

Position

Original

Variant

Get Predictions
Get Predictions

Enter the variants

Position

Original

Variant

10203040506070ADRGSGWNLAATPSPRALSRLKTLPLARLLRQAGHTDRVIKGLAAGDAWSALTGLTGSLAGALQATADSGRVAQSequenceα-helicesβ-strandsCoilSS Conf. score
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer

WebGL does not seem to be available.

This can be caused by an outdated browser, graphics card driver issue, or bad weather. Sometimes, just restarting the browser helps. Also, make sure hardware acceleration is enabled in your browser.

For a list of supported browsers, refer to http://caniuse.com/#feat=webgl.

Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.60
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains


Neighboring Clusters of Orthologous Genes (COGs)



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Visualization
All Organisms
Unclassified
41.6%58.4%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts

Associated Scaffolds





 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Visualization
Peatland
Bog Forest Soil
Bog
Iron-Sulfur Acid Spring
Soil
Vadose Zone Soil
Glacier Forefield Soil
Surface Soil
Peatlands Soil
Arctic Peat Soil
Soil
Forest Soil
Hardwood Forest Soil
Soil
Untreated Peat Soil
Bog Forest Soil
Permafrost Soil
Fen
Bog
Soil
Prmafrost Soil
Tropical Forest Soil
Forest Soil
Soil
Corn, Switchgrass And Miscanthus Rhizosphere
Fen
Palsa
Bog
Roots
Corn Rhizosphere
Host-Associated
Boreal Forest Soil
7.2%3.2%11.2%4.0%15.2%8.0%12.8%8.0%3.2%
Download SVG
Download PNG
Download CSV
Powered by ApexCharts



Associated Samples


Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI12694J13545_101740413300001166Forest SoilGGAVRGSGWNLAANPSGRALARLKKLPLAPLLLQASHTDRVIKGLSAGDPWSALTGLTGAFAGALQASGI*
JGIcombinedJ26739_10044055833300002245Forest SoilATPSPRALSRLRTLPLARLLRQAGHTDRVVKGLAAGDAWSALTGLTGSLAGALQATADSGRVAL*
JGIcombinedJ26739_10057590233300002245Forest SoilLAAAPSAKALSRLKKLPLARLLLQASHTDRVIKGLAMGDAWSAVTGLTGALAGALQATPESGRVAP*
JGIcombinedJ26739_10121830323300002245Forest SoilARERNRLRSADRGSGWNLAATPSQRALARLKTLPLARLLRQAAHADRVIKGLAAGDAWSALTGLTGGLAGALQATADSGRVVP*
Ga0062385_1116934623300004080Bog Forest SoilRSHSAGAGWNQAAKPSERALSRIGTMPLARLLRQAGQTDRIIKGLARGDAWTAIIGLTASMAGALQASRDSGRVAS*
Ga0062384_10047852223300004082Bog Forest SoilMWQARERDRLRSAVRGSGWNLAANPSARALARLKKLPLAPLLLQASRTDRVIKGLAAGDAWSALTGLTGAFAGALQATAI*
Ga0062384_10090838113300004082Bog Forest SoilLWALVRQLRGLWQARERNRLRSTLRGSGWNLAATPSSRALSRLPELPLDRLLMLANHTDRVIKGLAMGDAWSALTGLAGGLAGALHATVDSGRVAT*
Ga0062384_10114488013300004082Bog Forest SoilGSGWNLAATPSPRALSRLKKLPLGRLLKQASHTDRVIKGLALGDAWSALTGLTGGLAGALQGPEESGRVAV*
Ga0062384_10137482923300004082Bog Forest SoilRLHSAIRGGAWNLAATPSARALSRLRRLKLPPLILQASHADRVIKGLAVGDAWSALTELTGALAGALQAGAESGRVSS*
Ga0062387_10113892323300004091Bog Forest SoilDRLHTQSAGAGWNQAARPSARARARIGSMPLAQLLRQASEADRILKGAARGDAWTAIIGLTGCMAGALQAPQDSGRVVG*
Ga0062386_10107258513300004152Bog Forest SoilSPSAGTGWNQAARPSARALSRIGNMPLARLLRQASDTDRILKGVARGDAWTAIIGLTGSIAGALQASGDSGRVAG*
Ga0070734_1077060513300005533Surface SoilRERERLRSTSRGSGWNLAATPTPKALARMKSLPLARLMREAALADRIVKGMAPGDPWSAITGLAGSLAGALQAVPESGRVAP*
Ga0070764_1068163423300005712SoilARERDRLRSADRGSGWNLAATPSPRALSRLKTLPLPRLLIQAGHTDRVIKGLAPGDAWSALTGLAGGLAGALQASTESGRVPV*
Ga0070766_1113496823300005921SoilGAPGGAARGSPWNLAANPSGRALGRLKKLPLAPLLLQASHTDRVIKGLAAGDAWSALTGLTGAFAGALQANGI*
Ga0066788_1021635823300005944SoilRELRGMWQARERDRLRSAARGSGWNLAANPSARALARLKKLPLAPLLLQASHTDRVIKGLSAGDAWSALTGLTGAFAGALQASGI*
Ga0080026_1003449933300005952Permafrost SoilRGSGWNLAATPSPRALSRLKNLPLAHLLIQASHTDRVIKGLATGDAWSAVTGLTGGLAGALQATLESGMVPV*
Ga0080027_1019776623300005993Prmafrost SoilRDRLRSQARGSGWNLAANPSPRALARLKKLPLAPLLLQASHTDRVIKGLSAGDAWGALTGLTGAFAGALQAGAESGRVTQ*
Ga0070715_1086757323300006163Corn, Switchgrass And Miscanthus RhizosphereWQARERDRLRSADRGSGWHLAATPSPRALARLKTLPLPRLLRQAGHTDRVIKGLAMGDAWSALTGLTGSLAGALQASPESGRVPP*
Ga0075522_1022123123300006638Arctic Peat SoilMWQARERERLRSAARGSGWNLAANPSGRALTRLKKLPLAPLLLQASHTDRVIKGLAVGDAWSALTGLTGAFAGALQAGGI*
Ga0073928_1052407723300006893Iron-Sulfur Acid SpringSPVRGSGWNLADTPSARALSRLKTLPLGRLLMQASHTDRVIKGLANGDAWSALTSLTGGLAGALQATADSGRVSV*
Ga0099794_1031884013300007265Vadose Zone SoilNARGSAWNLAATPSPRALSRLKALPLGRLLIQASHTDRVIKGLATGDAWSALTGLTGGLAGALQATTDSGRVPV*
Ga0099830_1062286513300009088Vadose Zone SoilSNARGSAWNLAATPSPRALSRLKALPLGRLLIQASHTDRVIKGLATGDAWSALTGLTGGLAGALQATTDSGRVPV*
Ga0099828_1115230813300009089Vadose Zone SoilWKTGKPERRDPTLVRELRGLWQARERDRLRSTVRGSGWNLAATPSPRALSRLKTLPLGRLLMQASHTDRVIKGLATGDAWSALTSLTGGLAGALQATTDSGRVPV*
Ga0105240_1044560333300009093Corn RhizosphereWQARERNRLHATARGSGWHLAATPSPRALSRLKTLPLARLLRQAGYADRVIKGLAAGDAWSALTGLTGALAGALQASPDSGRVAI*
Ga0116229_1062904123300009500Host-AssociatedGRGAWHQAAAPSERALARARTLPLARLLRQAHQTDRAIKGLGGDAWTAVIGLTAALAGALQAPAESGRVAP*
Ga0116230_1108688313300009510Host-AssociatedLRGLWQARERERLRSNARASGWNLAAQPSSAALARTPRLPLARLMLQSSQTDKVIKGLAAGDAWVAITGLTGAFAGALQATAESGRVSS*
Ga0116225_136910823300009524Peatlands SoilWNQAAKPSERALSRIGTMPLARLLRQAGQTDRIIKGLARGDAWTAIIGLTASMAGALQASRDSGRVAS*
Ga0116220_1028538123300009525Peatlands SoilGLWQARERSRLRSNGRGGGWNQAATPSARALARIGKMPLARLLRQAHHTDRVIKGLAGGDAWTAVIGLAAAMAGALQATADSGRVATI*
Ga0105854_137850023300009660Permafrost SoilSDRASGWNLAATPSPRALSRTKKLPLARLLVQASHTDRVIKGLAAGDAWSALTGLTGSLAGALQATADSGRVPP*
Ga0116216_1058686213300009698Peatlands SoilRLHSQSAGAGWHQAARPSARALARIGSMPLARLLRQASETDRILKGVVRGDAWTAIIGLTASIAGALQASEDSGRVAG*
Ga0116226_1148342423300009787Host-AssociatedARERERLRSNARASGWNLAAQPSSVALARKLPLARLMLQSSRTDKVIKGLAPGDAWGAITSLTGALAGALQATAESGRVSA*
Ga0116226_1177071423300009787Host-AssociatedWALNRELRGMWQLRERTRLRNNARGSGWHLAAPPSPEAVARLGRMPLARLLRQAHRVDRVLKGMAGGDPWTALTGLAAAMAGALQAAPDSGRVSSV*
Ga0099796_1007338133300010159Vadose Zone SoilAATPSSAALARISKIPLARLLRQAHHTDRVIKGLARGDAWTAVTGLAAGMAGALQATEDSGRVPK*
Ga0074046_1009601443300010339Bog Forest SoilLWALVRELRGLWQARERDRLHTQSAGAGWNQAARPSARALARIGGMPLAQLLRQASDVDRILKGVARGDAWTAIIGLTGSIAGALQAPRESGRVAG*
Ga0136449_10275879623300010379Peatlands SoilRSHTAGAGWNQAAKPSERAWSRVGTMPLARLLRQAAQTDRIIKGLTRGDAWTALIGLTASMAGALQASRESGRVAS*
Ga0126361_1046597623300010876Boreal Forest SoilRERNRLRSTVRGSGWNLAAAPSPRALSRLEQLPLSRLLVQASHTDRVIKGLARGDAWSALTALTGGLAGALQATPESGRVRG*
Ga0137399_1014872643300012203Vadose Zone SoilGWNLAATPSPRALSRLKTLPLGRLLMQASHTDRVIKGLATGDAWSALTSLAGGLAGALQATTVSGRVPL*
Ga0137413_1061609713300012924Vadose Zone SoilLRGLWQARERSRLRSPGRGSGWNLAATPSSAALARIGKIPLARLLRQAHHTDRVIKGLAGGDAWTAVTGLAAGMAGALQATEDSGRVPK*
Ga0137413_1128586623300012924Vadose Zone SoilRSNARGSAWNLSATPSSAALARISKMPLARLLRQANHTDRVIKGLAGGDAWTAITGLAAGMAGALQATADSGRVPS*
Ga0137416_1023922843300012927Vadose Zone SoilSGWNLAATPSSAALARISKIPLARLLRQAHHTDRVIKGLAGGDAWTAVTGLAAGMAGALQATEESGRVPS*
Ga0181537_1000489713300014201BogLRGLWQAGERDRLRSTERGGWNLAATPSPRALARLKQLPLGELLIQASHADRVIKGLAAGEPWSTLTGLTGGLAGALHASGESGRVHP*
Ga0182013_1067406423300014492BogILWALTRELRGLWQVRERNRLRSNGRGTGWNQAATPTPQALARIGKVPLASLLRQAHHTDRVVKGLAGGDAWTAITGLACSLSGALQATADSGRVSA*
Ga0182021_1058833913300014502FenLWALIRELRGLWQARERTRLRSNARGSGWNLAATPSARALARLGKMPLALLLRQAHHVDRVVKGMAGGDAWTAITGLTAGMAGALQAAPDSGRVAV*
Ga0181536_1032026513300014638BogQAAKPTPRALSRIGEMPLARLLRQAGQTDRIIKGVARGDPWTAIIELTASMAGALQAPADSGRVAT*
Ga0167639_104192313300015080Glacier Forefield SoilELRGLWQARERTRLRSTVRGSGWNLAATPSPRALSRLKQLPLARLLMQASHTDRVIKGLATGDPWSALTGLAGSLAGALQATTDSGRVPV*
Ga0167638_105902223300015197Glacier Forefield SoilQARERTRLRSTVRGSGWNLAATPSPRALSRLKQLPLARLLMQASHTDRVIKGLATGDPWSALTGLAGSLAGALQATTDSGRVPV*
Ga0137412_1115582023300015242Vadose Zone SoilPSSAALAPISKIPLAQLLGQAHHTDRVIKGLAGGDAWTAITGLAAGMAGALQATADSGRVPS*
Ga0137403_1075514723300015264Vadose Zone SoilSSAALARISKIPLARLLRQAHHTDRVIKGLAGGDAWTAVTGLVAGMAGALQATEDSGRVPR*
Ga0137403_1139166113300015264Vadose Zone SoilVRGSGWNLAATPSARALSRLKKLPLAPLLMQASHTDRVIKGLSPGDAWSALTGLTGAFAGALQASADSGRVAS*
Ga0187879_1003301663300017946PeatlandLWQARERSRLRSNGRGGGWNQAATPSARALARIGKMPLARLLRQAHHTDRVIKGLAGGDAWTAVIGLAAAMAGALQPTADSGRVAAI
Ga0187847_1041243413300017948PeatlandRGLWQARERDRLRSTLRGGGWNQVAAPSPQALSRLGKMPLARLLIQANHADRVIKGLAAGDSWSALIGLTGSLAGALQPIADSGRVAP
Ga0193713_112210813300019882SoilRGLWQARERSRLRSHDRGSGWNLAATPSSAALARISKIPLARLLRQAHHTDRVIKGLAGGDAWTAVTGLAAGMAGALQATEDSGRVPS
Ga0193728_118851423300019890SoilSGWNLAATPSARALSRLKKLPLAPLLMQASHTDRVIKGLSPGDAWSALTGLTGAFAGALQASADSGRVSQ
Ga0193717_118126223300020060SoilRLRSTARGSGWNLAATPSARALGRLRKLPLAPLLVQASRTDRVIKGLLPGDAWSALTGLTGAFAGALQANGESGRVSL
Ga0210407_1079047623300020579SoilHGRGSSWNLAATPSSAALARIGKIPLARLLRQAHHTDRVIKGLAGGDAWTAVTGLAAGMAGALQATEDSGRVLA
Ga0210407_1081414913300020579SoilLVREIRGMWQARERDRLRSSERGSGWNLAANPSPRALARLRKLPLAPLLLQASHADRVIKGLAPGEAWSTLTGLTGALAGALQAGSDSGRVTS
Ga0210407_1083737113300020579SoilVRELRGLWQARERDRLRSTVRGSGWNLAATPSPRALARLGKLPLARLLIQASHTDRVIKGLATGDAWSAVTGLAGGLAGALQATEESGRVSV
Ga0210403_1081742213300020580SoilLWALVRELRGLWQARERDRLRSAVRGSGWNLAATPSRHALSRLKKLPLARLLVEASNADKIIKGLAIGDAWSALTGLTSGLAGALQATEDSGRVPT
Ga0210399_1033706233300020581SoilERERLRSAARGSGWNLAATPSPRALSRLKNLPLARLLMQASHTDRVIKGLATGDAWSALTGLTGGLAGALHAAPESGRVAT
Ga0210395_1090483523300020582SoilAARGSPWNLAANPSGRALTRLKKLPLAPLLLQASHTDRVIKGLSAGDPWSALTGLTGAFAGALQASGI
Ga0179596_1005925513300021086Vadose Zone SoilALIRELRGLWQTRERNRLRSNVRGGGWNQAATPSSRALARSATMPLARLLRQAHHTDRVVKGLATGDAWTAITGLAAGMAGALQATADSGRVAI
Ga0210396_1014798853300021180SoilQARERDRLRGAPGGAVRGSGWNLAANPSGRALARLKKLPLAPLLLQASHTDRVIKGLSAGDPWSALTGLTGAFAGALQASGI
Ga0210396_1080867513300021180SoilGLWQARERNRLRSADRGSGWNLAATPSPRALSRLRTLPLARLLRQAGHTDRVIKGLAAGDAWSALTGLTGSLAGALQATADSGRVAL
Ga0210396_1142473213300021180SoilVLRELRGLWQARERQRLRSSGRGSGWHLAATPSPHALSRLDQLPLSQLLVQASHTDRVIKGLARGDAWSALTGLTGALAGALQASADSGRVGR
Ga0210389_1083486323300021404SoilMWQARERERLRGAPGGAARGSPWNLAANPSGRALARLKKLPLAPLLLQASHTDRVIKGLSAGDAWSALTGLTGAFAGALQASGI
Ga0210387_1021907413300021405SoilQARERDRLRSSARGSAWNLAATPSPRALSRLKKLPLAPLLMQAGHTDRVIKGLAAGDAWSALTGLTGAFAGALQAGAESGRVGP
Ga0210386_1043509833300021406SoilSGWNLAATPSARAASRLKTLPLGRLLMQASHTDRVIKGLATGDAWSALTALTGGLAGALQATADSGRVPV
Ga0210386_1044018433300021406SoilMWQARERDRLRGAPGGAVRGSGWNLAANPSGRALARLKKLPLAPLLLQASHTDRVIKGLSAGDPWSALTGLTGAFAGALQASGI
Ga0210394_1009493013300021420SoilWHLAATPSPRALSRLNQLPLSPLLMQASHTDRVLKGLAMGDAWSALTALTGGLAGALQATAESGRVRP
Ga0210394_1096343523300021420SoilRLRSAARGSGWNLAATPSPRALSRLKKLPLAPLLIQASHTDRIIKGISPGDAWSALTGLTGAFAGALQATPDSGRVSQ
Ga0210392_1057823123300021475SoilPWNLAANPSGRALARLKKLPLAPLLLQASHTDRVIKGLSAGDAWSALTGLTGAFAGALQAGGI
Ga0210402_1147019013300021478SoilALLRELRGMWQARERDRLRSSHRGSGWNLAAAPSPRALSRAKKLKLAPLLLQAGQTDRVIKGLATGDAWSALTSLTATLAGALQAGAESG
Ga0247679_107171213300024251SoilGSRWHLAATPSPRALARLKTLPLPRLLRQAGHTDRVIKGLAMGDAWSALTGLTGSLAGALQASPESGRVPP
Ga0179589_1061840323300024288Vadose Zone SoilSGWNLAATPSSAALARISKIPLARLLRQAHHTDRVIKGLAGGDAWTAVTGLAAGMAGALQATEDSGRVLS
Ga0207665_1156804113300025939Corn, Switchgrass And Miscanthus RhizosphereLAATPSPRALARLKTLPLPRLLRQAGHTDRVIKGLAMGDAWSALTGLTGSLAGALQASPESGRVPP
Ga0209849_109525913300026215SoilARERDRLRSAARGSGWNLAANPSARALARLKKLPLAPLLLQASHTDRVIKGLSAGDAWSALTGLTGGLAGALHATAESGRVPI
Ga0179587_1099772913300026557Vadose Zone SoilRGSGWNLAAAPSPRALSRLEQLPLAPLLVQASHTDRVIKGLASGDAWSALTGLAGGLAGALQATAESGRVAV
Ga0207761_106145813300027516Tropical Forest SoilGWNLAATPSPRALSRAKKMPLAALLMQASIADRVIKGLSAGDAWSALTGLTGAFAGALQANAESGRVSP
Ga0208042_114615723300027568Peatlands SoilGLWQARERSRLRSNGRGGGWNQAATPSARALARIGKMPLARLLRQAHHTDRVIKGLAGGDAWTAVIGLAAAMAGALQATADSGRVATI
Ga0209329_101542613300027605Forest SoilQARERDRLRSAARGSGWNLAATPSARALSRLKKLPLAPLLMQASHTDRVIKGLAAGDAWSALTALTGGLAGALQATPESGRVHG
Ga0209007_112358223300027652Forest SoilDRGSGWNLAATPSPRALSRLKTLPLARLLRQAGHTDRVVKGLAAGDAWSALTGLTGSLAGALQATADSGRVAL
Ga0209007_114321523300027652Forest SoilERDRLRSADRGSGWSLAATPSPRALSRLKTLPLPRLLIQAGHTDRVIKGLAPGDAWSALTGLAGGLAGALQASTESGRVPV
Ga0209530_104217533300027692Forest SoilVREVRGLWQARERNRLRSADRGSGWNLVATPSPRALSRLKTLPLARLLRQAGHVDRVIKGLAAGDAWSALTGLTGSLAGALQATADSGRVVA
Ga0209446_105112833300027698Bog Forest SoilKRLHSMERGSGWNLAAAPSAAALSRLQKLPLSNLLLQAGLADRVIKGISAGDAWDAITGITCALAGALQATSDSGRVTR
Ga0209447_1013270723300027701Bog Forest SoilRLRSAARGSGWNLAAAPSARAQARMQKLPLAGLLLQASVVDKVIKGLTPGDAWSALTGLTAALAGALQAGAESGRVSP
Ga0209060_1031237813300027826Surface SoilSTSRGSGWNLAATPTPKALARMKSLPLARLMREAALADRIVKGMAPGDPWSAITGLAGSLAGALQAVPESGRVAP
Ga0209274_1040292623300027853SoilERSRLRSQAPGAGWSQAAKPSPRALARTSTMPLARLLRQAAHTDRIIKGLARGDAWTAIIGLTGSMAGALQASQDSGRVAG
Ga0209006_1005182463300027908Forest SoilDRGSAWNLAATPSSRALSRLKTLPLARLLRQAGHVDRVIKGLAAGDAWSALTGLTGSLAGALQATADSGRVVP
Ga0209006_1006173913300027908Forest SoilNLAATPSPRALSRVRELPLARLLMQASHADRVIKGLAAGDAWSEVTGLTCGLAGALQAAPESGRVPV
Ga0302234_1003889153300028773PalsaADRGSGWNLAATPSPRALSRLKTLPLARLLRQAGHTDRVIKGLAAGDAWSALTGLTGSLAGALQATADSGRVAQ
Ga0302157_1036474713300028813BogVRELRGLWQASERNRLRSAQRGSGWNLAATPSPAALARLRSLPLEHLLSRASLVDRIIKGLAPGDPWSALTGLAATLAGALQPNGVSGRVAS
Ga0302157_1037632523300028813BogLVRELRGLWLAKEADRLGSHSGAVGWNLAAKPSPRALRRIGTMPLARLLRQAGGTDRIIKGIARGEPWTAIISLAMNMAGALQATRDSGRVAV
Ga0302218_1011610223300028863PalsaRGAPGAAARGSGWNLAATPSARALARLRKLPLAPLLLQASYTDRVIKGLSAGDAWGALTGLTGAFAGALQASGI
Ga0311359_1112317613300029914BogEPPLILWALVRELRGLWQAQEGDRLRSNSRSGWNLAATPSPHARSRLGKLPLRRLLIQASVTDKIIKGLAPGDAWTSLTGLAAGVAGALQAPAVSGRVAP
Ga0311340_1009243663300029943PalsaRGAPGGAARGSGWNLAATPSARALARLRKLPLAPLLLQASYTDRVIKGLSAGDAWSALTGLTGAFAGALQASGI
Ga0311340_1108259623300029943PalsaRNRLRSNSRGGGWNQAATPSPRALARMGKMPLARLLRQAHHTDRVIKGLTGGDAWTAITGLAAAMAGALQATVDSGRVAI
Ga0311352_1028424133300029944PalsaSQAAKPSPRALARTSKMPLARLLRQAAQTDRIIKGLARGDAWTAIIGLTGSMAGALQASQDSGRVAG
Ga0311330_1066871923300029945BogLRGLWQARERERLRSNARASSWNLAAQPTSAALARAPKLPLTRLMLQSSRTDRIIKGLASGDAWGAITALTGAFAGALQATAESGRVAG
Ga0311342_1050949733300029955BogRDRLRSSVRGSGWNLAATPSPRALSRIKKLPLARLLSQASRTDKIIKGLAAGDAWSALTGLTGGLAGALQAAPDSGRVAQ
Ga0311334_1132377513300029987FenNLAAAPSPRALSRIRKLPLARLLVQASHTDRVIKGLAAGDAWSALTGLTGSLAGALQATLESGRVRA
Ga0302302_126214523300029997PalsaRERDRLRGAPGAAARGSGWNLAATPSARALARLRKLPLAPLLLQASYTDRVIKGLSAGDAWGALTGLTGAFAGALQASGI
Ga0311339_1053958833300029999PalsaGLWQAQESDRLHSTMRSGWNLAATPSSRARSRLGKMPLRRLLMQASLTDKIIKGLAPGDAWTALTGLAAAFAGALQA
Ga0311338_1010271563300030007PalsaGWNLAATPSPRALSRMQKMPLAQLLMQASTADRVIKGLSAGDPWSSITGLTGALAGALQASVESGRVSS
Ga0311344_1085473623300030020BogVRELRGLWQARERNRLRGPGRAGGWNQAATPSARALARSGRMPLARLLRQAHHTDRVVKGLAGGDAWTAVMGLAAAMAGALQARVDSGRVAT
Ga0311344_1125439323300030020BogWALIRELRGLWQEKERRRLRSNSRGSGWNLAATPSPRAQARLGKLPLRALLRQAHLADRVVKGMAGGDAWTAITGLTAALAGALQAAPESGRVAV
Ga0302274_1050837213300030041BogLRGLWQARERERLHSAQGSGWNLAAKPAPRALARMRSMPLAGLLVEASRADRIIKGLAAGDPWTALTGLTARMAGALQPRRISGRVAQ
Ga0302196_1037455913300030225BogNRLRGPGRAGGWNQAATPSARALARSGRMPLARLLRQAHHTDRVVKGLAGGDAWTAVMGLAAAMAGALQARVDSGRVAT
Ga0311370_1110151013300030503PalsaGLWQARERARLRSAIRGSGWNLAATPSPRALSRMQKMPLAQLLVQAGAADRIIKGLSPGDPWGSITGLTGALAGVLQAGAESGRVAS
Ga0311356_1143529613300030617PalsaRGSGWNLAATPSPRAQSRLKKLPLARQLVQAARADRVIKGLAAGDAWSALTGLTGGLAGALQATAESGRVVP
Ga0302316_1020863313300030646PalsaKPSPRALARTSKMPLARLLRQAAQTDRIIKGLARGDAWTAIIGLTGSMAGALQASQDSGRVAG
Ga0302309_1042624013300030687PalsaQAATPSPRALARMGKMPLARLLRQAHHTDRVIKGLAGGDAWTAITGLAAAMAGALQASADSSRVAV
Ga0302314_1146059923300030906PalsaSGWNLAASPSPQALARIRKLPLARLLVQSSRADRVIKGLAPGDAWTAITGITCAIAGTLQATAESGRVAQ
Ga0265740_105326413300030940SoilGLWQARERDRLRSAPRGSGWNLAANPSGRALARLKKLPLAPLLLQASYTDRVIKGLLAGDAWSALTGLTGAFAGALQASGN
Ga0073995_1182275413300031047SoilGRAGGWNQAATPSARALARMGKMPLALLLRQAHHTDRIVKGLTGGDAWTAVTGLVASMAGALQATADSGRVAT
Ga0170824_10293785213300031231Forest SoilWNLAANPSGRALARLKKLPLAPLLLQASHTDRVIKGLSAGDAWSALTGLTGAFAGALQASGN
Ga0302307_1042455923300031233PalsaWALVRELRGLWQAQEGDRLRSNSRSGWNLAATPSPHARSRLGKLPLRRLLIQASVTDKIIKGLAPGDAWTSLTGLAVGVAGALQAPAVSGRVAP
Ga0302324_10244337413300031236PalsaATPSPRALARMGKMPLARLLRQAHHTDRVIKGLAGGDAWTAITGLAAAMAGALQASADSSRVSA
Ga0302320_1053710013300031524BogRGLWQASERNRLRSAQRGSGWNLAATPSPAALARLRSLPLEHLLSRASLVDRIIKGLAPGDPWSALTGLAATLAGALQPNGVSGRVAS
Ga0302326_1288362823300031525PalsaWNQAATPSARALARMGKMPLAELLRQAHHTDRVIKGLAGGDAWTAITGLAAAMAGALQAPVDSGRVAV
Ga0307477_1018079013300031753Hardwood Forest SoilERDRLRSNARASGWNLAATPSPRALSRLKTLPLGGLLMQASHTDRVIKGLATGDAWSALTSLTGGLAGALQATTDSGRVAV
Ga0307478_1018599743300031823Hardwood Forest SoilERGRLRSAVRGSGWHLAATPSPRALSRLNQLPLSPLLMQASHTDRVLKGLATGDAWSALTALTGGLAGALQATAESGRVRP
Ga0307478_1160608223300031823Hardwood Forest SoilMWQARERERLRGAPGGAARGSGWNLAANPSGRALARLKKLPLAPLLLQASHTDRVIKGLTAGDAWSALTGLTGAFAGALQAGGI
Ga0335079_1103507913300032783SoilRELRGLWQARERERLRSAPQGAGWNQAAKPSPRALARTAKMPLARLLRQAAQADRIIKGAVRGDAWTTVTGLAAAMAGALQAPRDSGRVAV
Ga0316214_107122913300033545RootsRERLRLRSTARGSGWNLAANPSERAVSRLKKLPLAPLMIQAGHTDRVIKGLAPGDAWSALTGLTGAFAGALQAGADSGRVSQ
Ga0370514_103895_495_7223300034199Untreated Peat SoilLRGAPGAAARGSGWNLAATPSARALARLRKLPLAPLLLQASYTDRVIKGLSAGDAWSALTGLTGAFAGALQASGI


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.