NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F068104

Metagenome / Metatranscriptome Family F068104

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F068104
Family Type Metagenome / Metatranscriptome
Number of Sequences 125
Average Sequence Length 74 residues
Representative Sequence MNSLKGHLFARTRVEFSFRALVDRTIREQNREERRLAEQRATKHQFRARNSCILDGRNYRFARRLLLFPRAQF
Number of Associated Samples 103
Number of Associated Scaffolds 125

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 80.87 %
% of genes near scaffold ends (potentially truncated) 40.00 %
% of genes from short scaffolds (< 2000 bps) 77.60 %
Associated GOLD sequencing projects 96
AlphaFold2 3D model prediction Yes
3D model pTM-score0.32

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (80.000 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(9.600 % of family members)
Environment Ontology (ENVO) Unclassified
(20.800 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(46.400 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 68.32%    β-sheet: 0.00%    Coil/Unstructured: 31.68%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.32
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 125 Family Scaffolds
PF14534DUF4440 8.00
PF00285Citrate_synt 4.80
PF01740STAS 4.00
PF13884Peptidase_S74 2.40
PF04519Bactofilin 0.80
PF00127Copper-bind 0.80
PF13415Kelch_3 0.80
PF00793DAHP_synth_1 0.80
PF13211DUF4019 0.80
PF14559TPR_19 0.80
PF01177Asp_Glu_race 0.80
PF10137TIR-like 0.80
PF04773FecR 0.80
PF14870PSII_BNR 0.80
PF13620CarboxypepD_reg 0.80
PF12697Abhydrolase_6 0.80
PF13414TPR_11 0.80
PF04239DUF421 0.80

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 125 Family Scaffolds
COG0372Citrate synthaseEnergy production and conversion [C] 4.80
COG1664Cytoskeletal protein CcmA, bactofilin familyCytoskeleton [Z] 0.80
COG2323Uncharacterized membrane protein YcaP, DUF421 familyFunction unknown [S] 0.80

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms80.00 %
UnclassifiedrootN/A20.00 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459005|F1BAP7Q02FV8XJAll Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium505Open in IMG/M
2170459012|GOYVCMS01BQPAQNot Available507Open in IMG/M
2189573001|GZR05M101BO7NXAll Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium506Open in IMG/M
2228664021|ICCgaii200_c0964757All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1363Open in IMG/M
3300000041|ARcpr5oldR_c027683Not Available526Open in IMG/M
3300000890|JGI11643J12802_10552213All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium516Open in IMG/M
3300000955|JGI1027J12803_102070991All Organisms → cellular organisms → Bacteria722Open in IMG/M
3300000955|JGI1027J12803_107170566Not Available529Open in IMG/M
3300004479|Ga0062595_100036312All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2097Open in IMG/M
3300004480|Ga0062592_100036337All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2511Open in IMG/M
3300004629|Ga0008092_10953256All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium505Open in IMG/M
3300005294|Ga0065705_10301886Not Available1052Open in IMG/M
3300005328|Ga0070676_11212188Not Available574Open in IMG/M
3300005332|Ga0066388_101248285All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1275Open in IMG/M
3300005332|Ga0066388_103323896All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia822Open in IMG/M
3300005332|Ga0066388_104692718All Organisms → cellular organisms → Bacteria → PVC group695Open in IMG/M
3300005332|Ga0066388_105420108All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium647Open in IMG/M
3300005435|Ga0070714_100221876All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1737Open in IMG/M
3300005436|Ga0070713_100336849All Organisms → cellular organisms → Bacteria1397Open in IMG/M
3300005455|Ga0070663_100047758All Organisms → cellular organisms → Bacteria3033Open in IMG/M
3300005535|Ga0070684_100389023All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1285Open in IMG/M
3300005555|Ga0066692_10500839Not Available773Open in IMG/M
3300005569|Ga0066705_10722198All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia599Open in IMG/M
3300005586|Ga0066691_10731421All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia585Open in IMG/M
3300005713|Ga0066905_100033185All Organisms → cellular organisms → Bacteria2957Open in IMG/M
3300005764|Ga0066903_100430995All Organisms → cellular organisms → Bacteria2190Open in IMG/M
3300005764|Ga0066903_104796266Not Available719Open in IMG/M
3300005764|Ga0066903_106890917All Organisms → cellular organisms → Bacteria → PVC group590Open in IMG/M
3300005764|Ga0066903_106983600Not Available586Open in IMG/M
3300005983|Ga0081540_1246348All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium625Open in IMG/M
3300006169|Ga0082029_1420982All Organisms → cellular organisms → Bacteria4550Open in IMG/M
3300006175|Ga0070712_100203330All Organisms → cellular organisms → Bacteria1557Open in IMG/M
3300006796|Ga0066665_10648412All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium841Open in IMG/M
3300006852|Ga0075433_10564410All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1000Open in IMG/M
3300009090|Ga0099827_10587624All Organisms → cellular organisms → Bacteria960Open in IMG/M
3300009094|Ga0111539_10355909All Organisms → cellular organisms → Bacteria1704Open in IMG/M
3300009094|Ga0111539_12593961All Organisms → cellular organisms → Bacteria → PVC group588Open in IMG/M
3300009174|Ga0105241_11273900Not Available699Open in IMG/M
3300009792|Ga0126374_11067584All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium638Open in IMG/M
3300010038|Ga0126315_10679251All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium670Open in IMG/M
3300010041|Ga0126312_10107079All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1915Open in IMG/M
3300010046|Ga0126384_11898568All Organisms → cellular organisms → Bacteria → PVC group567Open in IMG/M
3300010154|Ga0127503_11038569All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia565Open in IMG/M
3300010159|Ga0099796_10221182All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia776Open in IMG/M
3300010329|Ga0134111_10204155All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium799Open in IMG/M
3300010361|Ga0126378_12084295Not Available647Open in IMG/M
3300010362|Ga0126377_12737121All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia568Open in IMG/M
3300010366|Ga0126379_10052297All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia3371Open in IMG/M
3300010376|Ga0126381_100134966All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium3217Open in IMG/M
3300010376|Ga0126381_100697476All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1452Open in IMG/M
3300010398|Ga0126383_12287120All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium626Open in IMG/M
3300012351|Ga0137386_10752610All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium700Open in IMG/M
3300012582|Ga0137358_11121294All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium500Open in IMG/M
3300012948|Ga0126375_11564659All Organisms → cellular organisms → Bacteria → PVC group566Open in IMG/M
3300012961|Ga0164302_10184919All Organisms → cellular organisms → Bacteria1265Open in IMG/M
3300012971|Ga0126369_10919961All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium960Open in IMG/M
3300012989|Ga0164305_10819424All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium774Open in IMG/M
3300013296|Ga0157374_10019297All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia6032Open in IMG/M
3300015077|Ga0173483_10090714All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1254Open in IMG/M
3300015371|Ga0132258_11091505All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium2017Open in IMG/M
3300015371|Ga0132258_11324960All Organisms → cellular organisms → Bacteria1819Open in IMG/M
3300015371|Ga0132258_12022906All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1449Open in IMG/M
3300015371|Ga0132258_12739035All Organisms → cellular organisms → Bacteria1229Open in IMG/M
3300015372|Ga0132256_100083798All Organisms → cellular organisms → Bacteria3059Open in IMG/M
3300015372|Ga0132256_103176174All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium552Open in IMG/M
3300016357|Ga0182032_11815980All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia533Open in IMG/M
3300016371|Ga0182034_11355360All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia621Open in IMG/M
3300016404|Ga0182037_10800304Not Available813Open in IMG/M
3300016422|Ga0182039_12170241All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia512Open in IMG/M
3300016445|Ga0182038_10140741All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1826Open in IMG/M
3300018027|Ga0184605_10070175All Organisms → cellular organisms → Bacteria1517Open in IMG/M
3300018027|Ga0184605_10341105All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia677Open in IMG/M
3300018066|Ga0184617_1107522All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium786Open in IMG/M
3300019356|Ga0173481_10133751All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1001Open in IMG/M
3300019356|Ga0173481_10749515All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium534Open in IMG/M
3300019886|Ga0193727_1030660All Organisms → cellular organisms → Bacteria1844Open in IMG/M
3300019886|Ga0193727_1118609Not Available759Open in IMG/M
3300020016|Ga0193696_1068093Not Available929Open in IMG/M
3300020016|Ga0193696_1125303All Organisms → cellular organisms → Bacteria649Open in IMG/M
3300020062|Ga0193724_1119217All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia522Open in IMG/M
3300021560|Ga0126371_12319639All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium648Open in IMG/M
3300022534|Ga0224452_1028974All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia1589Open in IMG/M
3300022557|Ga0212123_10000952All Organisms → cellular organisms → Bacteria85817Open in IMG/M
3300022756|Ga0222622_10031889All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium2817Open in IMG/M
3300025315|Ga0207697_10035105All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia2053Open in IMG/M
3300025898|Ga0207692_10075603All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1787Open in IMG/M
3300025906|Ga0207699_10414570All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium961Open in IMG/M
3300025915|Ga0207693_10164963All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium1744Open in IMG/M
3300025928|Ga0207700_10684025All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia915Open in IMG/M
3300025929|Ga0207664_10367210All Organisms → cellular organisms → Bacteria1276Open in IMG/M
3300025930|Ga0207701_10004029All Organisms → cellular organisms → Bacteria14971Open in IMG/M
3300025930|Ga0207701_10025842All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia5583Open in IMG/M
3300026374|Ga0257146_1045098All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia715Open in IMG/M
3300026551|Ga0209648_10654965All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia574Open in IMG/M
3300026944|Ga0207570_1007188All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia772Open in IMG/M
3300027655|Ga0209388_1208568Not Available539Open in IMG/M
3300028379|Ga0268266_10848900All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia883Open in IMG/M
3300028828|Ga0307312_10372502All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium936Open in IMG/M
3300030973|Ga0075395_11285444All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium643Open in IMG/M
3300031231|Ga0170824_115261601All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia738Open in IMG/M
3300031446|Ga0170820_13545361All Organisms → cellular organisms → Bacteria1043Open in IMG/M
3300031469|Ga0170819_10569273Not Available752Open in IMG/M
3300031474|Ga0170818_107715456All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia796Open in IMG/M
3300031573|Ga0310915_10405521All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium968Open in IMG/M
3300031833|Ga0310917_10143685All Organisms → cellular organisms → Bacteria1570Open in IMG/M
3300031908|Ga0310900_11101754All Organisms → cellular organisms → Bacteria → PVC group657Open in IMG/M
3300031912|Ga0306921_12218137All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia578Open in IMG/M
3300031942|Ga0310916_10502107All Organisms → cellular organisms → Bacteria → PVC group1033Open in IMG/M
3300031946|Ga0310910_10583706All Organisms → cellular organisms → Bacteria886Open in IMG/M
3300031947|Ga0310909_10124463All Organisms → cellular organisms → Bacteria2098Open in IMG/M
3300032017|Ga0310899_10496831All Organisms → cellular organisms → Bacteria → PVC group599Open in IMG/M
3300032180|Ga0307471_100137921All Organisms → cellular organisms → Bacteria2316Open in IMG/M
3300032205|Ga0307472_101734672All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium618Open in IMG/M
3300032205|Ga0307472_102056650All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium573Open in IMG/M
3300032261|Ga0306920_102504626All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia710Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil9.60%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil8.80%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil7.20%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil7.20%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil6.40%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.60%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere4.80%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil4.00%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere4.00%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil3.20%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.40%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil2.40%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere2.40%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil2.40%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.40%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.60%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil1.60%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.60%
Agricultural SoilEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil1.60%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere1.60%
SoilEnvironmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil0.80%
Iron-Sulfur Acid SpringEnvironmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring0.80%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil0.80%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil0.80%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.80%
Termite NestEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest0.80%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.80%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.80%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.80%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.80%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.80%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.80%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.80%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.80%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.80%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.80%
Tropical Rainforest SoilEnvironmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil0.80%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459005Grass soil microbial communities from Rothamsted Park, UK - July 2009 direct MP BIO1O1 lysis 0-21cmEnvironmentalOpen in IMG/M
2170459012Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO1O1 lysis Rhizosphere grassEnvironmentalOpen in IMG/M
2189573001Grass soil microbial communities from Rothamsted Park, UK - FD2 (NaCl 300g/L 5ml)EnvironmentalOpen in IMG/M
2228664021Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000041Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 old rhizosphereHost-AssociatedOpen in IMG/M
3300000890Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300004629Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome P72I A01 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005435Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005555Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141EnvironmentalOpen in IMG/M
3300005569Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_154EnvironmentalOpen in IMG/M
3300005586Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140EnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005983Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1Host-AssociatedOpen in IMG/M
3300006169Termite nest microbial communities from Madurai, IndiaEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006796Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114EnvironmentalOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010154Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300010329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010376Tropical forest soil microbial communities from Panama - MetaG Plot_28EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012358Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012582Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaGEnvironmentalOpen in IMG/M
3300012685Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaGEnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300018027Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coexEnvironmentalOpen in IMG/M
3300018066Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1EnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300019886Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c2EnvironmentalOpen in IMG/M
3300020016Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1EnvironmentalOpen in IMG/M
3300020062Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2a1EnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022534Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1EnvironmentalOpen in IMG/M
3300022557Paint Pots_combined assemblyEnvironmentalOpen in IMG/M
3300022756Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1EnvironmentalOpen in IMG/M
3300025315Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)Host-AssociatedOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025929Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300026374Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-08-AEnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300026944Soil microbial communities from Kellog Biological Station, Michigan, USA - Nitrogen cycling UWRJ-G01K2-12 (SPAdes)EnvironmentalOpen in IMG/M
3300027655Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1 (SPAdes)EnvironmentalOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028828Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202EnvironmentalOpen in IMG/M
3300030973Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB6 Emin (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031446Fir Summer Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031469Fir Spring Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031474Fir Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031833Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178EnvironmentalOpen in IMG/M
3300031908Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031942Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300032017Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
E41_072239102170459005Grass SoilLFARHWVGYRFRALVDRTIHEQRREERRLAEQRATKHQFQARSSCILDGRNYRIARRLLSLAKAQ
N56_085104302170459012Grass SoilHLFARGRIEFSFRALVDQTIREQNREERRLAEQRATKHQFPARNSCILDGRNSRITRRLLLFPEAQF
FD2_066592602189573001Grass SoilSFIGATTMNYVKGHLFARVRVEFSLGTLVDRTIREQNREERRLAEQRATRHQFQARNSCVLDGRNYRIARRLLLFPKAQF
ICCgaii200_096475712228664021SoilMNIEIGHLFGRPRIEYRFGTLVDRTIREQRRDERRLSEQRATKHRFQARNSCILDGRNYRIARRLLLLARAQF
ARcpr5oldR_02768323300000041Arabidopsis RhizosphereMNIAKDHLFGRDRVEYSFRTLVARTLREQRHEERQLAEQRGTKHQFQARNSCILDGRNYRVARQLLLLARAQF*
JGI11643J12802_1055221313300000890SoilMNIEIGHLFGRPRIEYRFGTLVDRTIREQRRDERRLSEQRATKHRFQARNSCILDGRNYRIARRLLLLARAQF*
JGI1027J12803_10207099113300000955SoilMNYTKGHLLARGRVEYSFRALVDRTIRAQNREEQRLAEQRGTKHQFQARSSCILDGRNY
JGI1027J12803_10717056623300000955SoilVHWNYTMNIAKGHLFARARVKYAFGALVDRTIREQNREQRRLAEQRATRHQFQARNSCMLDGRNYR
Ga0062595_10003631213300004479SoilMNIANGYLFGRGRIEYNFGALIDRTLRERHREEWRLAEQRATKHRFQARNSCVLDGRNYRMARRLLSLVRAQF*
Ga0062592_10003633733300004480SoilMNTAKGHLLVRDRVEYRFRALVDRTIRDQRREQIQLAEQRGTKHQFQARNSCILDGRNYRIARRLLLLAKAQFH*
Ga0008092_1095325623300004629Tropical Rainforest SoilRVEYTLGTLVNRTLRKQRHEERRLAEQRGTKHQFQARNSCISDGRSFRIARRLLLVVKAQF*
Ga0062594_10028335713300005093SoilMQLPGQAHPNAKLDANCSSKLQTMKSTKIHLFYRGRIGYSFRALVDRTISKRHRDERQLAEQRGTKHQFQARNSCILDGRNYRIA
Ga0065705_1030188623300005294Switchgrass RhizosphereMNIEIGHLFGRPRIEYRFGTLVDRTIREQRSDERRLSEQRATKHQFQARNSCVLDGRNYRIARRLLLLARAQF*
Ga0070676_1121218823300005328Miscanthus RhizosphereSKVQTMNTAKGHLFVRDRVGYRFRALVDRTLRERRHEERRLAEQRGTKHQFRARNSCILDGQNYRFARRLLLLAKAQFN*
Ga0066388_10124828513300005332Tropical Forest SoilMNIGMGHLFGRGRAEYKFGALVDRTIRERRREERRLAERRATKHQFDARNSCIFDGRNYRIARPLLLFAKAQF*
Ga0066388_10332389613300005332Tropical Forest SoilMNIGNGHLFGRGRVEYKFGALVDRTIRERRRKERRLAEQRSTKHQFDARSACIFDGRNYRIARPLLLFAKAQF*
Ga0066388_10469271813300005332Tropical Forest SoilVTLADRTIREQRHQERRLAEQRATKHQFQARNWCVLDGRNYRVARRLLLLARA
Ga0066388_10542010813300005332Tropical Forest SoilMNIGKSYLFGRGRVEYKFGALVDRTIRERRREERRLAERRATKHQFDARNACISDGRNYRIARPLLLLAKAQF*
Ga0070714_10022187643300005435Agricultural SoilMNSLKGHLFARTRVEFSFRALVDRAIREQNREERRLAEQRATKHQFWARNSCILDGRNYRFARRLLLFPKAQF*
Ga0070713_10033684913300005436Corn, Switchgrass And Miscanthus RhizosphereMNYAKGHLFARARIEDRFGALVDRTIREQYGEERRLAEQRATKHQFQARSSCILDGRNYRFARRLFLFALAQF*
Ga0070663_10004775843300005455Corn RhizosphereMNTAKGHLFVRDRVGYRFRALVDRTLRERRHEERRLAEQRGTKHQFRARSSCILDGQNYRFARRLLLLAKAQFN*
Ga0070684_10038902333300005535Corn RhizosphereMNLVKGHLFNGGRTEYFGTLVDRTLRKQRRQERRLAEQRGTKHQFQARNSCIMDGRSYRIAPRLLLLARAQF*
Ga0066692_1050083913300005555SoilMSSAKGHSFGRDRVGYNFRALVDRTIREQHGEERRLAEQRATRHQFHARNSCILDGRNYRIARRLFLFARAQF*
Ga0066705_1072219823300005569SoilMNYTKGHLLTRNRIEYSFGALVHRTIREQRREERRLAEQRATKHQFHARNSCILDGRNYRIARRLFLFA
Ga0066691_1073142113300005586SoilAHPNAKLNANRSSKLQTMNYAKHHLFGPDRVEYTFRALVHRTIREQRREERRLAEQRATKHQFHARNSCILDGRNYRIARRLFLFARAQF*
Ga0066905_10003318513300005713Tropical Forest SoilMNSEKANLFARHRFGYNFATFVDRTIREQRREERRLAEQRTTKYQFQARSSCILDGRNYR
Ga0066903_10043099533300005764Tropical Forest SoilMNIATGHLFGRDRAEYTFRTLVDRTLREQRHEERRLAEQRGTKHQFQARNSCILDRRNYRIARRLLLVARAHF*
Ga0066903_10479626623300005764Tropical Forest SoilMNIAKGHFFNRDRAEFTFGAVVDRKLREQRHEERRLAEQRSTKHQFQAKNSCILDGRSYRIARRLLLLARAQF*
Ga0066903_10689091723300005764Tropical Forest SoilMNFAKVHLFGRGRVEYNFGALVDRTVHTQRLEERRLAERRSTRHRFEARNSCILDGRSYRIARRLLALARAQF*
Ga0066903_10698360013300005764Tropical Forest SoilMNIAKGHLFGRDRPEYTFRTLVDRTLREQRHEERRLAEQRGTKHQFQARNSCILDRRNYRIARRLLLVARAQF*
Ga0081540_124634813300005983Tabebuia Heterophylla RhizosphereMNTLKGYLLARDRVEFNLGTFVDRTIREHRCEERRLAEQRATKHQFRARSSCILDGRNYRIARRLLSLAR
Ga0082029_142098253300006169Termite NestMNYIKSHLFARDRVRHGFGALVDRTISEQRRSERQLAEQRATKHRFEARNSCILDGRSYRIARRLLLFARAQF*
Ga0070712_10020333013300006175Corn, Switchgrass And Miscanthus RhizosphereMNYAKGHVLARTRVEFSFRALVDRTIREQNREERRLAEQRATKHQFRARNSCILDGRNYRFARRLLLFP
Ga0066665_1064841213300006796SoilYPFTGAAHPNAKLNANRSSELQTMNYAKHHLFGRDRVEYSFRALVVRTIREQRREQRRLAAQRGTKHQFHARNSCILDGRNYRIARRLFLFARAQF*
Ga0075433_1056441013300006852Populus RhizosphereMNIAKGHSFGRDRVGHDFRALVDRTLREQRCEERRLAEQRATKHEFQARNSCTLDGRNYRIARRLLLLATAQF*
Ga0099827_1058762413300009090Vadose Zone SoilMNNAKGHSFDRDRVGYSFGALVDRTIRKQHREERRLAEQRATKHQFHARNSCILDGRNYRIARRL
Ga0111539_1035590923300009094Populus RhizosphereMNIAKGHSFGRDRVGHDFRALGDRTLREQRCEERRLAEQRATKHEFQARNSCTLDGRNYRIARRLLLLATAQF*
Ga0111539_1259396113300009094Populus RhizosphereMNTAKGHLFVRDRVGYRFRALVDRTLRERRHEERRLAEQRGTKHQFRARSSCILDGQNYRFARRLLLLAKAQF
Ga0105241_1127390013300009174Corn RhizosphereQMPGSKRIVHWRLQTMNSLKGHLFARTRVEFSFRALVDRAIREQNREERRLAEQRATKHQFRARTPRILDGRNYRFARRLLLFPRAQF*
Ga0105249_1234217513300009553Switchgrass RhizospherePNAKLDANCSSKLQTMKSTKIHLFYRGRIGYSFRALVDRTISKRHRDERQLAEQRGTKHQFQARNSCILDGRNYRIARPLFLFARAQF*
Ga0126374_1106758413300009792Tropical Forest SoilMNIGKGHLFGRGRVEYKFGALVDRTVRERRREERRLAERRATKHQFDARNSCIFDGRNYRIARPLLLFAKAQF*
Ga0126315_1067925123300010038Serpentine SoilMNITKGHLFARDRLQFSFRTLVDRTIREQRREERRLAKQRGTKHKFKARNSCIFDGRNYRIPRRLLLSAKTEF*
Ga0126315_1121144613300010038Serpentine SoilMNYVKHHLFGRDRVGHSFRALVDRTIRQQRREQRRLAEQRATKHQFHARSSCILDGRN
Ga0126312_1010707943300010041Serpentine SoilMNIMKDHLFARDRLQFSFRTLVDRTVRQQRREERRLAEQRGTKHKFKARNSCIFDGRNYRIARRLLLLARTQF*
Ga0126384_1189856813300010046Tropical Forest SoilMNIEIGNLFLRRGVEYSFGTLVDRTLREQRRQERRLAEQRGTKHRFQARSSCVPDGRNYRIARRLLLLAR
Ga0127503_1103856913300010154SoilKGHSFGRDRVGYNFRALVDRTLREQRCEERRLAEQRATKHEFQARNSCTLDGRNYRIARRLLLLAMAQF*
Ga0099796_1022118213300010159Vadose Zone SoilRFNANCSSEVQTMNSAKGHSFGRDRVGYSFGALVDRTIRKQHREERRLAEQRATKHQFHARNSCILDGRNYRVARRLFLFARAQF*
Ga0134111_1020415513300010329Grasslands SoilMNSLKGHSFRRHRVGYSFRALVDRTIREQHRDERRLAEQRATKHQFHARNSCILDGRNYR
Ga0126378_1208429513300010361Tropical Forest SoilMNTANGNLFGRDQVEYSFRGLVDRTIRERRREDRRLAEQRGTKHQFQARNSCILDSRNFRIARRLLLLARAQF*
Ga0126377_1273712113300010362Tropical Forest SoilMNIELRNLFGRPRIEYKFGTLVDRTIREQRGEERRLAEQRPTKHRFQARNSCVMDGRNYRIARRLLSLARAQF*
Ga0126379_1005229743300010366Tropical Forest SoilMNYAKGHLLARDRIKYSFRTLVDRTFRERHHEERRLAEQRGTKHQFQARNSCILNGRNYRIARRLLLLARAQF*
Ga0126381_10013496643300010376Tropical Forest SoilMNIARGDLFGRDRAEYTFGTLVDRTLREQRHEERRLAEQRGTKHQFQARNSCILDRRNYRIARRLLLVARAQF*
Ga0126381_10069747633300010376Tropical Forest SoilMNIAKAHSFDRGRVGYNFRALVDRTLREQRCQERRLAEQRATKHEFQARNSCILDGRTYRVARRLLLLGMAQS*
Ga0126383_1228712013300010398Tropical Forest SoilMNYAKGHLLARDRIKYSFRTLVDRTLRERHHEERRLAEQRGTKHQFQARNSCILDGRNYR
Ga0137363_1164502513300012202Vadose Zone SoilTEAAHPNARFNANCSSEVQTMNSAKGHSFGRDRVGYSFGALVDRTIRKQHREERRLAEQRATKHQFHARNSCILDGRNYRIARRLFLFARAQF*
Ga0137386_1075261013300012351Vadose Zone SoilNANRSSELQTMNYAKHHLFGRDRVEYTFRALVHRTIREQRREERRLAEQRATKHQFHARNSCILDGRNYRIARRLFLFARAQF*
Ga0137368_1008669713300012358Vadose Zone SoilKNGIAFWLPRSAHPNAKLNANCSSDLPTMNYAKDHLFARDRVEYSFRTLIARTLCEQRHEERQLAEQRGTKHQFQARNSCILDGRNYRIARRLFLFARAQF*
Ga0137358_1112129423300012582Vadose Zone SoilMNYAKGHLFARAGVEFSFRALVDRTIREQNREERRLAEQRATKHQFQARNSCILDGRNYRFARRLL
Ga0137397_1125071413300012685Vadose Zone SoilLRLNGIAFWLPRTAHPNAKLSANCSLELQTMNYAKDHLFARARVEFSFRALVDRTIREQNREERRLAEQRATKHQFQARNSCILDGRNYRFARRLFLFPRAQF*
Ga0126375_1156465923300012948Tropical Forest SoilMNITKGHSFGRDRVGYNFRALVDRTLREQRCQERRLAEQRATKHEFQARNSCTLDGRNYRIARRLLLLAMAQ
Ga0164302_1018491913300012961SoilQTMNIAKGHSFGRDRVGYNFRALVDRTLREQRCEERRLAEQRATKHEFQARNSCTLDGRNYRIARRLLLLAMAQF*
Ga0126369_1091996113300012971Tropical Forest SoilMNYAKGHLLARDRIKYSFRTLVDRTLRERHHEERRLAEQRGTKHQFQARNSCILNGRNYRIARRLLLLARAQF*
Ga0164305_1081942413300012989SoilMNSLNGHLFAGGRVQYSFSALVDRTIREQHREERRLAEQRATRHQFHARNSCILDGQNYRMARRLFLFARAQF*
Ga0157374_1001929773300013296Miscanthus RhizosphereMNIAKRHSFGRDRVRYNFRALVDRTFREQRCEERRLAEQRATKHRFQARNSCILDGRTYRIARRLLLLARAQF*
Ga0173483_1009071413300015077SoilMNYAQGHLFARARVGYSFRALVDRAIREQHREQRRLAEQRATKHQFHARNSCILDGRNYRIARPLFLFPKAQF*
Ga0132258_1109150543300015371Arabidopsis RhizosphereMNYTKGHLFARARVGYSFGALLDRTIREQHHEQQRLAEQRATKHQFQARNSCTLDGRNYRLARRLLLFPRAQF*
Ga0132258_1132496023300015371Arabidopsis RhizosphereMNVVKSPLFGRARIEYNFGTFIDRTIRERRREERLLAERRSTKHRFPARNSCVLDGRNYRIARRLLSLVKAQF*
Ga0132258_1202290633300015371Arabidopsis RhizosphereMNTAKGHLFGRDRVEYSFGTLIDRTLREQRHEERRLAEQRGTKHQFQARNSCLIDGRNYRVAQRLLLLARTQF*
Ga0132258_1273903523300015371Arabidopsis RhizosphereMNVAKDYLFGRDRVEYSFRTLVARTLREQRHEERQLAEQRGTKHQFQARNSCILDGRNYRVARRLLLLAKAQF*
Ga0132256_10008379843300015372Arabidopsis RhizosphereMNTAKGHLFVRDRVGYRFRALVDRTLRERRHEERRLAEQRATKHQFRARSSCILDGQNYRFARRLLLLAKAQFN*
Ga0132256_10317617423300015372Arabidopsis RhizosphereVEYSFRTLVARTLREQRHEERQLAEQRGTKHQFQARNSCILDGRNYRVARRLLLLAKAQF
Ga0182032_1181598023300016357SoilMNFAASHLSDRDRAEHAFGTLVDRTLRERRHEERRLAEQRATKHQFQAKNSCIMDWRNYRIARRLLPLARAQF
Ga0182034_1135536013300016371SoilMNVAKGHLFGRDRAEYTFRTLVDRTLRERRHEERRLAEQRATKHQFQAKNSCIMDWRNYRIARRLLLLARAQF
Ga0182037_1080030413300016404SoilMNYTNGHLLAGSRIENSFRALVDRTIREWHREERRLAEQRGTKHQFRARNSCISDGRHYRLAQRLLLFARA
Ga0182039_1217024123300016422SoilMNIATSHLSDRDRAEHAFGTLVDRTFREQRHQERRLAEQRATKHQFQAKNSCIMDWRNYRIARRLLLLARAQF
Ga0182038_1014074133300016445SoilMNYTRSHLLARDQIGFRALVDRAVREQRREERRLAERRATKHQFQARSSCILDGRNCRIARGLLLFARAQF
Ga0184605_1007017533300018027Groundwater SedimentMNSAKGHSFGRDRVGYSFRALVDRTIREEHREERRLAEQRATRHQFHARNSCILDGRNYRIARRLFLFARAQF
Ga0184605_1034110523300018027Groundwater SedimentMISAKGHSFGRVRVGYSFRALIDRTIREQNREERRLAEQRATKHQFQARNSCILDGRNYRFARQLLLFPRAQF
Ga0184617_110752213300018066Groundwater SedimentMNSAKGHSFGRDRVGYSFRALVDRTIREEHREERRLAEQRATKHQFHARNSCILDGRNYRIARLFLFARAQF
Ga0173481_1013375113300019356SoilMNYAQGHLFARARVGYSFRALVDRAIREQHREQRRLAEQRATKHQFHARNSCILDGRNYRIARPLFLFPKAQF
Ga0173481_1074951523300019356SoilMNIAKGHSFGRDRVGYDFRALVDRTLREQRCEERRLAEQRATKHRFQARNSCILDGRTYRIARRLLLLA
Ga0173479_1040608723300019362SoilRRDDAAAPEAHPNTNFNANCSSELQTMNIAKGHSFGRDRVGYNFRALVNRTLREQRCEERRLADQRATRHRFQARNSCILDGRNYRIARRLLLLAIAQF
Ga0193727_103066013300019886SoilFSFRTLVDRTIREQNREERRLAEQRATKHQFRARNSCILDGRNYRFARRLLLFPGAQF
Ga0193727_111860913300019886SoilMNYVKGHLFARVRVEFSLGTLVDRTIREQNREERRLAEQRATKHQFRARNSCILDGRNYR
Ga0193696_106809313300020016SoilMNYAKGHLFARTRVGFSFRALVDRTIREQNREDRQLAEQRPTKHQFQARNSCILDGRNYRFARQL
Ga0193696_112530313300020016SoilMPGSTRIVHRRVQTMISAKGHSFGRVRVGYSFRALIDRTIREQNREERRLAEQRATKHQFRARNSCIL
Ga0193724_111921723300020062SoilMNYAKGHLFARAGVESSFRALVDRTIREQNREQRRLAEQRATKHEFQARNSCILDGRNYRLARRLFLFARAQF
Ga0126371_1231963913300021560Tropical Forest SoilMNYAKGHLLARDRIKYSFRTLVDRTLRERHHEERRLAEQRGTKHQFQARNSCILDGRNYRIARRLLLLARAQF
Ga0224452_102897423300022534Groundwater SedimentMPGSTRIVHRRVQTMISAKGHSFGRVRVGYSFRALVDRTIREQHREEHRLAEQRATKHRFHARNSCILDGRNYRIARRLFLFARAQF
Ga0212123_10000952333300022557Iron-Sulfur Acid SpringMNSLKGHLVARDRFEFSFRALVDRTVREQNREDRRLAEQRATKHQFRARNSCILDGQNYRFARRLFLFARAQF
Ga0222622_1003188943300022756Groundwater SedimentMNFAKGHLFARGRVQHSFKTLVDRTIREQHREERRLAEQRATKHQFHARNSCILDGRNYRIARLFLFARAQF
Ga0207697_1003510533300025315Corn, Switchgrass And Miscanthus RhizosphereMNTAKGHLFVRDRVGYRFRALVDRTLRERRHEERRLAEQRGTKHQFRARSSCILDGQNYRFARRLLLLAKAQFN
Ga0207692_1007560323300025898Corn, Switchgrass And Miscanthus RhizosphereMNSLKGHLFARTRVEFSFRALVDRTIREQNREERRLAEQRATKHQFRARNSCILDGRNYRFARRLLLFPRAQF
Ga0207699_1041457023300025906Corn, Switchgrass And Miscanthus RhizosphereTAHPNAKLNANCSSEVQTMNYAKGHVLARTRVEFSFRALVDRAIREQNREERRLAEQRATKHQFWARNSCILDGRNYRFARRLLLFPKAQF
Ga0207693_1016496323300025915Corn, Switchgrass And Miscanthus RhizosphereMNSLKGHLFARTRVEFSFRALVDRAIREQNREERRLAEQRATKHQFWARNSCILDGRNYRFARRLLLFPKAQF
Ga0207700_1068402513300025928Corn, Switchgrass And Miscanthus RhizosphereMNYAKGHLFARARIEDRFGALVDRTIREQYGEERRLAEQRATKHQFQARSSCILDGRNYRFARRLFLFALAQF
Ga0207664_1036721013300025929Agricultural SoilMNYAKGHVLARTRVEFSFRALVDRTIREQNREERRLAEQRATKHQFRARNSCILDGRNYRFARRLLLFPRAQF
Ga0207701_10004029153300025930Corn, Switchgrass And Miscanthus RhizosphereMNYWICHLLARDRVEHNFRTLVDRTLREQRHEERRLSEQRGTKHQFQARNSCIPDGRNYRIARRLLLFARAQF
Ga0207701_1002584263300025930Corn, Switchgrass And Miscanthus RhizosphereMNIAKRHSFGRDRVRYNFRALVDRTFREQRCEERRLAEQRATKHRFQARNSCILDGRTYRIARRLLLLARAQF
Ga0207701_1013453623300025930Corn, Switchgrass And Miscanthus RhizosphereMQLRGQAHPNAKLDANCSSKLQTMKSMKIHLFDRGRIGYSFRALVDRTISKRHRDERQLAEQRGTKHQFQARNSCILDGRNYRIARPLFLFARAQF
Ga0257146_104509833300026374SoilLQTMNYAKGHLFARAGVEFSFRALVDRTIREQNRQERRLAEQRATKHEFQARNSCILDGRNYRSARPLLLFARAQF
Ga0209648_1065496513300026551Grasslands SoilMNYAKSHLFARTRVEFSFRALVDRTIREQNRDERRLAEQRATKHQFRARNSCILDGQNYRFARRLLLFPS
Ga0179587_1117578913300026557Vadose Zone SoilITASHLPRAAHPNAKLNTNCSSELPAMNYAKDHLFARDRVEYSFRALVARTIREQHREERRLAERRATKHQFHARNSCILDGRNYRIARRLFLFARAQF
Ga0207570_100718813300026944SoilSSSTRIAIGATTMNYWICHLLARDRVEHNFRTLVDRTLREQRHEERRLSEQRGTKHQFQARNSCIPDGRNYRIARRLLLFARAQF
Ga0209388_120856823300027655Vadose Zone SoilMNSAKGHSFGRDRVGYSFRALIDRTIREQHREERRLAERRATKHQFHARNSCILDGRNYRIARRLSLF
Ga0268266_1084890023300028379Switchgrass RhizosphereMNLVKGHLFNGGRTEYFGTLVDRTLRKQRRQERRLAEQRGTKHQFQARNSCIMDGRSYRIAPRLLLLAR
Ga0307312_1037250223300028828SoilMNSLKGHLFARGRIQYSFKTLVDRTIREQHRDERRLAAQRATKHQFHARNSCILDGRNYRIARRLFLFARAQF
Ga0075395_1128544413300030973SoilMNIEKSHLFARARVEYSFRALVDRTIREQNREERRLAEQRATKHQFQARNSCVLDGRNYRTARLILLFARAQF
Ga0170824_11526160123300031231Forest SoilMNYAKGHLFPRARVEYSFRALVDRTIRNQNREERRLAEQRATKHQFQARNSCILDGRNYRFARRLFLFARA
Ga0170820_1354536113300031446Forest SoilMPGSKRIVHWRLQTMNSLKGHLFARTRVEFSFRALVDRTIREQNREERRLAEQRATKHQFRARNSCILDGRNYRFARRLLLFPRAQFGWKHAGVSRVLPQRARSY
Ga0170819_1056927313300031469Forest SoilMNYAKGHLFARTRVEFSFRALVDRTIREQNRKERRLAEQRATKHQFRARNSCILDGKNYRFAR
Ga0170819_1547304423300031469Forest SoilRKCRCDENGAFGLPRAAHPNVGLNANYSLELQTMNYAKGHLFARDRVGYNFRALVDRTIREQNREERRLAEQRATKHEFQARNSCISDGRNYRSARPLLLFARAQF
Ga0170818_10771545623300031474Forest SoilMNYAKGHLFPRARVEYSFRALVDRTIRNQNREERRLAEQRATKHQFQARNSCILDGRNYRFARRLFLFARAHFDWKHAAVSRVIPQR
Ga0310915_1040552113300031573SoilMNIAKGHSFGRDRVGYNFRALVDRTLREQRCEERRLAEQRARKHRFQARNSCILDGRNYRIAR
Ga0310917_1014368533300031833SoilMNYTRSHLLARDQIGFRALVDRAVREQRREERRLAERRATKHQFQARSSCILDGRNYRIA
Ga0310900_1110175423300031908SoilMNTAKGHLFVRDRVGYRFRALVDRTLRERRHEERRLAEQRGTKHQFRARSSCILDGQNYRFARR
Ga0306921_1221813713300031912SoilMNIATSHLSDRDRAEHAFGTLVDRTLRERRHEERRLAEQRATKHQFQAKNSCIMDWRNYRIARRLLLLARGQF
Ga0310916_1050210723300031942SoilMNIAKGHSFGRDRVGYNFRALVDRTLREQRCEERRLAEQRARKHRFQARNSCTLDGRNYRIARRLLLLARAQF
Ga0310910_1058370613300031946SoilMNYTRSHLLARDQIGFRALVDRAVREQRREERRLAERRATKHQFQARSSCILDGRNYRIARGLLLFARAQF
Ga0310909_1012446313300031947SoilHLLARDQIGFRALVDRAVREQRREERRLAERRATKHQFQARSSCILDGRNYRIARGLLLFARAQF
Ga0310899_1049683113300032017SoilMNTAKGHLFVRDRVGYRFRALVDRTLRERRHEERRLAEQRGTKHQFRARSSCILDGQNYRFA
Ga0307471_10013792113300032180Hardwood Forest SoilMNIEKGHLFARHRVEYSFRTLVDRTIHEQRREERQLAEQRATKHQFQARSSCILDGRNYRIAGRLLSLARAQF
Ga0307472_10173467213300032205Hardwood Forest SoilKLNANCSWELQTMNIEKGHLFARHRVEYSFRTLVDRTIHEQRREERRLAEQRATKHQFQARSSCILDGRNYRIAGRLLSLARAQF
Ga0307472_10205665013300032205Hardwood Forest SoilMNYAKGHLFARAGVESSFRALVDRTIREQNREQRRLAEQRATKHQFQARNSCILDGRNYRLARRLFLF
Ga0306920_10250462613300032261SoilMNIATSHLSDRDRAEHAFGTLVDRTLRERRHEERRLAEQRATKHQFQAKNSCIMDWRNYRIARRLLPLARAQF

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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