Metagenome / Metatranscriptome Family F068087

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F068087
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	78 residues
Representative Sequence	MKKLAVTAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQAEALDKQYKKMMDRNRKESENQKSDPWSNMRAPNEGKGK
Number of Associated Samples	108
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	46.40 %
% of genes near scaffold ends (potentially truncated)	37.60 %
% of genes from short scaffolds (< 2000 bps)	83.20 %
Associated GOLD sequencing projects	105
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (86.400 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (13.600 % of family members)
Environment Ontology (ENVO)	Unclassified (20.800 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (40.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 49.35% β-sheet: 0.00% Coil/Unstructured: 50.65%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF04055	Radical_SAM	11.20
PF06968	BATS	10.40
PF06347	SH3_4	4.80
PF07690	MFS_1	4.00
PF06808	DctM	3.20
PF02537	CRCB	3.20
PF00950	ABC-3	2.40
PF05708	Peptidase_C92	0.80
PF07683	CobW_C	0.80
PF03219	TLC	0.80
PF03807	F420_oxidored	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG0239	Fluoride ion exporter CrcB/FEX, affects chromosome condensation	Cell cycle control, cell division, chromosome partitioning [D]	3.20
COG0609	ABC-type Fe3+-siderophore transport system, permease component	Inorganic ion transport and metabolism [P]	2.40
COG1108	ABC-type Mn2+/Zn2+ transport system, permease component	Inorganic ion transport and metabolism [P]	2.40
COG4606	ABC-type enterochelin transport system, permease component	Inorganic ion transport and metabolism [P]	2.40
COG0523	Zinc metallochaperone YeiR/ZagA and related GTPases, G3E family	General function prediction only [R]	0.80
COG3202	ATP/ADP translocase	Energy production and conversion [C]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	86.40 %
Unclassified	root	N/A	13.60 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	86.40 %
Unclassified	root	N/A	13.60 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	86.40 %
Unclassified	root	N/A	13.60 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	85.60 %
Unclassified	root	N/A	13.60 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	52.00 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	16.80 %
Unclassified	root	N/A	13.60 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.80 %

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	32.80 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	16.80 %
Unclassified	root	N/A	13.60 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.80 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	16.80 %
Unclassified	root	N/A	13.60 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	9.60 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	1.60 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.80 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	16.80 %
Unclassified	root	N/A	13.60 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	8.00 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	1.60 %
Variovorax	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax	0.80 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	16.80 %
Unclassified	root	N/A	13.60 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	4.80 %
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	1.60 %
unclassified Variovorax	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax	0.80 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	16.80 %
Unclassified	root	N/A	13.60 %
Bradyrhizobium sp. NAS80.1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	4.80 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	1.60 %
Variovorax sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp.	0.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig31584	All Organisms → cellular organisms → Bacteria	1047	Open in IMG/M
2170459017\|G14TP7Y01CQIJE	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	747	Open in IMG/M
2199352025\|deepsgr__Contig_179387	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6167	Open in IMG/M
2209111006\|2214818565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	670	Open in IMG/M
3300000044\|ARSoilOldRDRAFT_c010424	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	777	Open in IMG/M
3300000816\|AF_2010_repII_A10DRAFT_1002595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1828	Open in IMG/M
3300000816\|AF_2010_repII_A10DRAFT_1004161	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1492	Open in IMG/M
3300004267\|Ga0066396_10040209	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	716	Open in IMG/M
3300004479\|Ga0062595_100719051	All Organisms → cellular organisms → Bacteria → Proteobacteria	806	Open in IMG/M
3300005162\|Ga0066814_10088075	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	566	Open in IMG/M
3300005163\|Ga0066823_10005545	All Organisms → cellular organisms → Bacteria → Proteobacteria	1650	Open in IMG/M
3300005165\|Ga0066869_10007213	Not Available	1434	Open in IMG/M
3300005289\|Ga0065704_10198577	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1157	Open in IMG/M
3300005295\|Ga0065707_10543750	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	726	Open in IMG/M
3300005329\|Ga0070683_100086208	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	2944	Open in IMG/M
3300005332\|Ga0066388_100267481	All Organisms → cellular organisms → Bacteria → Proteobacteria	2351	Open in IMG/M
3300005332\|Ga0066388_100445217	All Organisms → cellular organisms → Bacteria → Proteobacteria	1937	Open in IMG/M
3300005332\|Ga0066388_101012155	All Organisms → cellular organisms → Bacteria → Proteobacteria	1393	Open in IMG/M
3300005332\|Ga0066388_102554703	All Organisms → cellular organisms → Bacteria → Proteobacteria	929	Open in IMG/M
3300005332\|Ga0066388_103875082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	763	Open in IMG/M
3300005363\|Ga0008090_15288593	All Organisms → cellular organisms → Bacteria → Proteobacteria	1361	Open in IMG/M
3300005366\|Ga0070659_100566474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	974	Open in IMG/M
3300005535\|Ga0070684_102230258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	517	Open in IMG/M
3300005545\|Ga0070695_100838012	All Organisms → cellular organisms → Bacteria → Proteobacteria	739	Open in IMG/M
3300005578\|Ga0068854_101474839	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	617	Open in IMG/M
3300005713\|Ga0066905_100288246	All Organisms → cellular organisms → Bacteria → Proteobacteria	1282	Open in IMG/M
3300005764\|Ga0066903_100661036	All Organisms → cellular organisms → Bacteria → Proteobacteria	1830	Open in IMG/M
3300005764\|Ga0066903_100756123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1727	Open in IMG/M
3300005764\|Ga0066903_108629167	All Organisms → cellular organisms → Bacteria → Proteobacteria	519	Open in IMG/M
3300005841\|Ga0068863_101781710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	625	Open in IMG/M
3300005841\|Ga0068863_102549188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	520	Open in IMG/M
3300006050\|Ga0075028_100253965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	966	Open in IMG/M
3300006057\|Ga0075026_100063067	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1773	Open in IMG/M
3300006172\|Ga0075018_10398697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	699	Open in IMG/M
3300006178\|Ga0075367_10370151	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	905	Open in IMG/M
3300006854\|Ga0075425_100116341	All Organisms → cellular organisms → Bacteria → Proteobacteria	3050	Open in IMG/M
3300006871\|Ga0075434_100694091	All Organisms → cellular organisms → Bacteria → Proteobacteria	1035	Open in IMG/M
3300006871\|Ga0075434_101126950	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	797	Open in IMG/M
3300006903\|Ga0075426_10139675	Not Available	1746	Open in IMG/M
3300006903\|Ga0075426_11443309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	523	Open in IMG/M
3300006904\|Ga0075424_100960160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	911	Open in IMG/M
3300006914\|Ga0075436_100149010	All Organisms → cellular organisms → Bacteria → Proteobacteria	1646	Open in IMG/M
3300006914\|Ga0075436_100470883	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	916	Open in IMG/M
3300006954\|Ga0079219_10001362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	6045	Open in IMG/M
3300009094\|Ga0111539_10944671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1003	Open in IMG/M
3300009156\|Ga0111538_11366074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	894	Open in IMG/M
3300009156\|Ga0111538_12120774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	706	Open in IMG/M
3300009162\|Ga0075423_10237651	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1909	Open in IMG/M
3300009162\|Ga0075423_11782074	Not Available	664	Open in IMG/M
3300009174\|Ga0105241_11504102	Not Available	648	Open in IMG/M
3300009553\|Ga0105249_10420182	Not Available	1371	Open in IMG/M
3300009792\|Ga0126374_10017082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3075	Open in IMG/M
3300010043\|Ga0126380_10314209	Not Available	1122	Open in IMG/M
3300010046\|Ga0126384_10016307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4724	Open in IMG/M
3300010358\|Ga0126370_10198725	All Organisms → cellular organisms → Bacteria → Proteobacteria	1512	Open in IMG/M
3300010359\|Ga0126376_10341756	Not Available	1322	Open in IMG/M
3300010361\|Ga0126378_10430582	All Organisms → cellular organisms → Bacteria → Proteobacteria	1433	Open in IMG/M
3300010375\|Ga0105239_10214003	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax → unclassified Variovorax → Variovorax sp.	2160	Open in IMG/M
3300010400\|Ga0134122_10069252	Not Available	2739	Open in IMG/M
3300012208\|Ga0137376_10846806	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	786	Open in IMG/M
3300012479\|Ga0157348_1005911	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	746	Open in IMG/M
3300012497\|Ga0157319_1029149	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	586	Open in IMG/M
3300012505\|Ga0157339_1050608	Not Available	549	Open in IMG/M
3300012508\|Ga0157315_1004906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	979	Open in IMG/M
3300012960\|Ga0164301_11764693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	519	Open in IMG/M
3300012961\|Ga0164302_10067472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1852	Open in IMG/M
3300012971\|Ga0126369_10011023	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	6959	Open in IMG/M
3300012971\|Ga0126369_10245148	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1759	Open in IMG/M
3300012984\|Ga0164309_10295572	Not Available	1165	Open in IMG/M
3300012987\|Ga0164307_10680215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	804	Open in IMG/M
3300012988\|Ga0164306_12014997	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	502	Open in IMG/M
3300014325\|Ga0163163_13106689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	518	Open in IMG/M
3300014745\|Ga0157377_10225095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1203	Open in IMG/M
3300015371\|Ga0132258_11722685	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1580	Open in IMG/M
3300015372\|Ga0132256_100747124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	1094	Open in IMG/M
3300015374\|Ga0132255_102604064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	773	Open in IMG/M
3300017792\|Ga0163161_10929338	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	739	Open in IMG/M
3300017944\|Ga0187786_10409813	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	591	Open in IMG/M
3300017947\|Ga0187785_10223497	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	831	Open in IMG/M
3300018028\|Ga0184608_10379034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	617	Open in IMG/M
3300018060\|Ga0187765_10005036	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5586	Open in IMG/M
3300018081\|Ga0184625_10402987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	705	Open in IMG/M
3300020018\|Ga0193721_1128082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	632	Open in IMG/M
3300021560\|Ga0126371_10164176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2293	Open in IMG/M
3300021560\|Ga0126371_10428474	All Organisms → cellular organisms → Bacteria → Proteobacteria	1467	Open in IMG/M
3300022756\|Ga0222622_10166254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1436	Open in IMG/M
3300025315\|Ga0207697_10275042	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	746	Open in IMG/M
3300025904\|Ga0207647_10476734	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	697	Open in IMG/M
3300025906\|Ga0207699_10453886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	920	Open in IMG/M
3300025919\|Ga0207657_10072949	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2902	Open in IMG/M
3300025939\|Ga0207665_11078995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	640	Open in IMG/M
3300025941\|Ga0207711_11355041	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	654	Open in IMG/M
3300025944\|Ga0207661_11184757	Not Available	703	Open in IMG/M
3300025944\|Ga0207661_11452955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	629	Open in IMG/M
3300026041\|Ga0207639_10705816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	936	Open in IMG/M
3300027874\|Ga0209465_10007670	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	4756	Open in IMG/M
3300027915\|Ga0209069_10339463	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	808	Open in IMG/M
3300028380\|Ga0268265_10562089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1085	Open in IMG/M
3300028381\|Ga0268264_11073983	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	813	Open in IMG/M
3300028711\|Ga0307293_10106270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	891	Open in IMG/M
3300028720\|Ga0307317_10158908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	760	Open in IMG/M
3300028722\|Ga0307319_10260702	Not Available	571	Open in IMG/M
3300028791\|Ga0307290_10195811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	741	Open in IMG/M
3300028807\|Ga0307305_10000873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	11471	Open in IMG/M
3300028811\|Ga0307292_10073311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1314	Open in IMG/M
3300028876\|Ga0307286_10043880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1504	Open in IMG/M
3300030993\|Ga0308190_1144576	Not Available	561	Open in IMG/M
3300031226\|Ga0307497_10065087	Not Available	1325	Open in IMG/M
3300031231\|Ga0170824_107544261	Not Available	2193	Open in IMG/M
3300031421\|Ga0308194_10215977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	628	Open in IMG/M
3300031421\|Ga0308194_10322050	Not Available	542	Open in IMG/M
3300031538\|Ga0310888_10170124	Not Available	1177	Open in IMG/M
3300031543\|Ga0318516_10001699	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8685	Open in IMG/M
3300031681\|Ga0318572_10386176	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. NAS80.1	832	Open in IMG/M
3300031736\|Ga0318501_10478348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	678	Open in IMG/M
3300031740\|Ga0307468_101281909	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	666	Open in IMG/M
3300031847\|Ga0310907_10053171	All Organisms → cellular organisms → Bacteria → Proteobacteria	1580	Open in IMG/M
3300031858\|Ga0310892_10058374	All Organisms → cellular organisms → Bacteria → Proteobacteria	1949	Open in IMG/M
3300031896\|Ga0318551_10048200	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2139	Open in IMG/M
3300031940\|Ga0310901_10279863	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	694	Open in IMG/M
3300031946\|Ga0310910_10000123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	35971	Open in IMG/M
3300032041\|Ga0318549_10186520	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	929	Open in IMG/M
3300032068\|Ga0318553_10619697	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	566	Open in IMG/M
3300032090\|Ga0318518_10036662	All Organisms → cellular organisms → Bacteria → Proteobacteria	2276	Open in IMG/M
3300032205\|Ga0307472_100013307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4224	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	66.40%
Host-Associated	Host-Associated	32.00%
Engineered	Engineered	1.60%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	60.80%
Plants	Host-Associated → Plants	32.00%
Aquatic	Environmental → Aquatic	5.60%
Solid Waste	Engineered → Solid Waste	0.80%
Modeled	Engineered → Modeled	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	60.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.60%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.80%
Sediment	Environmental → Aquatic → Sediment	5.60%
Roots	Host-Associated → Plants → Roots	1.60%
Grass	Engineered → Solid Waste → Grass	0.80%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	44.00%
Loam	Environmental → Terrestrial → Soil → Loam	14.40%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.40%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	9.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.20%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.20%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.40%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.80%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.80%
Composting	Engineered → Solid Waste → Grass → Composting	0.80%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.40%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	9.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.60%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	3.20%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.20%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.40%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.60%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.80%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.80%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.80%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.80%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	13.60%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	10.40%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	8.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.40%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	3.20%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	3.20%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.20%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	2.40%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	2.40%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.40%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.40%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.40%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	2.40%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.60%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.60%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.60%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.80%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.80%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.80%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.80%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	0.80%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.80%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.80%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.80%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	0.80%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
2170459017	Litter degradation ZMR4	Engineered	Open in IMG/M
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
2209111006	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0	Host-Associated	Open in IMG/M
3300000044	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis soil old	Host-Associated	Open in IMG/M
3300000816	Forest soil microbial communities from Amazon forest - 2010 replicate II A10	Environmental	Open in IMG/M
3300004267	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005165	Soil and rhizosphere microbial communities from Laval, Canada - mgHMC	Environmental	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006178	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012479	Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.yng.030610	Environmental	Open in IMG/M
3300012497	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.2.old.240510	Host-Associated	Open in IMG/M
3300012505	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.10.yng.090610	Host-Associated	Open in IMG/M
3300012508	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.2.old.270510	Host-Associated	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025919	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028711	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_150	Environmental	Open in IMG/M
3300028720	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_357	Environmental	Open in IMG/M
3300028722	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_368	Environmental	Open in IMG/M
3300028791	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028876	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_140	Environmental	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032068	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f21	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0584.00002460	2166559005	Simulated	GIVTAPAFAQGKESEPLEILDRDKKLQAEALDKQYKRMMERNRKEGETQRADPWSNMRAPNEGKGK
4ZMR_01294780	2170459017	Switchgrass, Maize And Mischanthus Litter	MPGYIVMKKLAVSAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQADVVDKQYKKMMDRNRKEGENQKSDPWSNMRAPNEGKGK
deepsgr_03060230	2199352025	Soil	MKKLVATAFMLGIVTAPAFAQGKESEPLEILDRDKKLQAEALDKQYKRMMERNRKEGETQRADPWSNMRAPNEGKGK
2213853740	2209111006	Arabidopsis Rhizosphere	MKKLAVTAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQADVVDKQYKKMMDRNRKEGENQKSDPWSNMRAPNEGKGK
ARSoilOldRDRAFT_0104241	3300000044	Arabidopsis Rhizosphere	MKKLAVTAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQADVVDKQYKKMMDRNRKEGENQKSDPWSNMRAPNEGKGK*
AF_2010_repII_A10DRAFT_10025952	3300000816	Forest Soil	MKKLVTAFMLGILTAPAFAQSKDTEPLELLDRDKKQQAEAIDKQYKKMMDRNRKEGETQQRSDPWSNMRAPNEGKGK*
AF_2010_repII_A10DRAFT_10041612	3300000816	Forest Soil	MKKLAVTAFILGTLTAPAFAQSKDPEPLELIDRDKKQQAEAVDKQYKKMMDRTRKESDAQQRSDPWSNMRPPNEGKAK*
Ga0066396_100402091	3300004267	Tropical Forest Soil	MKKLAVTAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQAEALDKQYKKMMDRNRKESDAQQRSDPWSNMRAPNEGKGK*
Ga0062595_1007190512	3300004479	Soil	MKKLAITAFMLGILTAPAFAQGKESEPLEILDRDKRQQAEAVDKQYKRMMERNRKEGDAQKSDPWSNMRAPNEGKGK*
Ga0066814_100880752	3300005162	Soil	MKKLAVTAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQADAVDKQYKKMMDRNRKESENQKSDPWSNMR
Ga0066823_100055452	3300005163	Soil	MKKLAVTAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQADAVDKQYKKMMDRNRKESENQKSDPWSNMRAPNEGKGK*
Ga0066869_100072131	3300005165	Soil	MPGYIAMKKLAVTAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQADAVDKQYKKMMDRNRKESENQKSDPWSNMRAPNEGKGK*
Ga0065704_101985772	3300005289	Switchgrass Rhizosphere	MKKLAVIAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQAEALDKQYKKMMDRNRKESDAQQRSDPWSNMRAPNEGKGK*
Ga0065707_105437502	3300005295	Switchgrass Rhizosphere	DSLRWMPGYIAMKKLAVIAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQAEALDKQYKKMMDRNRKESDAQQRSDPWSNMRAPNEGKGK*
Ga0070683_1000862084	3300005329	Corn Rhizosphere	MKKLAVSAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQADVVDKQYKKMMDRNRKEGENQKSDPWSNMRAPNEGKGK*
Ga0066388_1002674812	3300005332	Tropical Forest Soil	MKKLAVTAFILGTLTAPAFAQFGQSKDPEPLELIDRDKKQQAEAVDKQYKKMMDRTRKESDAQQRSDPWSNMRAPNEGKGK*
Ga0066388_1004452172	3300005332	Tropical Forest Soil	MKKLAVTAFMLGILTAPAFAQSKDMEPLELLDRDKKQQAEAIDKQYKKMMDRNRKEGETQQRSDPWSNMRAPNEGKGK*
Ga0066388_1010121552	3300005332	Tropical Forest Soil	MKKLAMTAFMLGALTAPAFAQSKDMEPLELMDRDKKQQADVIDKQYKKMMDRNRKEGENQKSDPWSNMRAPNEGKGK*
Ga0066388_1025547032	3300005332	Tropical Forest Soil	MPGYIAMKKLAVTAFMLGVLTVPAFAQNRDMEPLELMDRDKKQQAESLDKQYKKMMDRNRKEADTQQRSDPWSNMRAPNEGKGK*
Ga0066388_1038750822	3300005332	Tropical Forest Soil	MKKLAVTAFMLGTLTAPAFAQGKDMEPLELMDRDKKQQAEALDKQYKKMMDRNRKESDAQQRSDPWSNMRTPNEGKAK*
Ga0008090_152885932	3300005363	Tropical Rainforest Soil	MKKLAVTAFMLGILTAPAFAQNKDMEPLELLDRDKKQQAEAIDKQYKKMMDRNRKEGETQQRSDPWSNMRAPNEGKGK*
Ga0070659_1005664742	3300005366	Corn Rhizosphere	MPGYIVMKKLAVSAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQADVVDKQYKKMMDRNRKEGENQKSDPWSNMRAPNEGKGK*
Ga0070684_1022302581	3300005535	Corn Rhizosphere	AFMLGTLTAPAFAQSKDMEPLELMDRDKKQQADAVDKQYKKMMDRNRKESENQKSDPWSNMRAPNEGKGK*
Ga0070695_1008380121	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MKKLAVTAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQAEALDKQYKKMMDRNRKESDAQQRSDPWSNMRAP
Ga0068854_1014748391	3300005578	Corn Rhizosphere	MKKLAVTAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQAEALDKQYKKMMDRNRKESENQKSDPWSNMRAPNEGKGK*
Ga0066905_1002882462	3300005713	Tropical Forest Soil	MKKLAVTAFMLGTLTAPAFAQGKDMEPLELMDRDKKQQAEALDKQYKKMMDRNRKESDAQQRSDPWSNMRTPNEGKGK*
Ga0066903_1006610362	3300005764	Tropical Forest Soil	MKKLAVTAFMLGILTVPAFAQGKDSEPLEIQDRDKKQQAEALDKQYKKMMDRNRKDGETQQRSDPWSNMRTPNEGKGK*
Ga0066903_1007561232	3300005764	Tropical Forest Soil	MVAFIDAGIYAMKKLAVTAFILGTLTAPAFAQFGQSKDPEPLELIDRDKKQQAEAVDKQYKKMMDRTRKESDAQQRSDPWSNMRAPNEGKGK*
Ga0066903_1086291671	3300005764	Tropical Forest Soil	MLGNIAMKKLAVTAFMLGILTVPAFAQSKDSEPLELLDRDKKQQAESLDKQYKKMMDRNRKDGETQQRSDPWSNMRTPNEGKGK*
Ga0068863_1017817102	3300005841	Switchgrass Rhizosphere	AFMLGTLTAPAFAQSKDMEPLELMDRDKKQQADVVDKQYKKMMDRNRKEGENQKSDPWSNMRAPNEGKGK*
Ga0068863_1025491882	3300005841	Switchgrass Rhizosphere	TAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQADALDKQYKKLMDRNRKESENQKSDPWSNMRAPNEGKGK*
Ga0075028_1002539653	3300006050	Watersheds	MKKLAITAFMLGILTAPAFAQGKESEPLEILDRDKRQQAEALDKQYKRMMERNRKEGDAQKSDPWSNMRAPNEGKGK*
Ga0075026_1000630671	3300006057	Watersheds	MTPGHIAMKKIAVTAFMLGILTAPAFAQGKDSEPLEILDRDKKMQAEALDKQYKKMIDRNRKEGDAQKSDPWSNMRAPNEGKGK*
Ga0075018_103986972	3300006172	Watersheds	MTPGHIAMKKIAVTAFMLGILTAPAFAQGKESEPLEILDRDKKMQAEALDKQYKKMMDRNRKEGDSQKSDPWSNMRGPNEGKGK*
Ga0075367_103701511	3300006178	Populus Endosphere	MKKLAVTAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQADALDKQYKKLMDRNRKESENQKSDPWSNMRAPNE
Ga0075425_1001163414	3300006854	Populus Rhizosphere	MKKLAVTAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQADALDKQYKKLMDRNRKESENQKSDPWSNMRAPNEGKGK*
Ga0075434_1006940912	3300006871	Populus Rhizosphere	MKKLAVIAFILGTLTAPAFAQSKDMEPLELMDRDKKQQAEALDKQYKKMMDRNRKESDAQQRSDPWSNMRAPNEGKGK*
Ga0075434_1011269502	3300006871	Populus Rhizosphere	AFMLGTLTAPAFAQSKDMEPLELMDRDKKQQADALDKQYKKLMDRNRKESENQKSDPWSNMRAPNEGKGK*
Ga0075426_101396752	3300006903	Populus Rhizosphere	MPGYIAMKKLAVTAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQADALDKQYKKLMDRNRKESENQKSDPWSNMRAPNEGKGK*
Ga0075426_114433091	3300006903	Populus Rhizosphere	AFMLGTLTAPAFAQSKDMEPLELMDRDKKQQAEALDKQYKKMMDRNRKESDAQQRSDPWSNMRAPNEGKGK*
Ga0075424_1009601602	3300006904	Populus Rhizosphere	GTLTAPAFAQSKDMEPLELMDRDKKQQADVVDKQYKKMMDRNRKEGENQKSDPWSNMRAPNEGKGK*
Ga0075436_1001490101	3300006914	Populus Rhizosphere	MKKLAVTAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQADAVDKQYKKMMDRNRKESDAQQRSDPWSNMRAPNEGKGK*
Ga0075436_1004708831	3300006914	Populus Rhizosphere	VTAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQADALDKQYKKLMDRNRKESENQKSDPWSNMRAPNEGKGK*
Ga0079219_100013623	3300006954	Agricultural Soil	MKKLAVTAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQADAVDKQYKKLMDRNRKESENQKSDPWSNMRAPNEGKGK*
Ga0111539_109446712	3300009094	Populus Rhizosphere	MPGYIAMKKLAVIAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQAEALDKQYKKMVDRNRKESDAQQRSDPWSNMRAPNEGKGK*
Ga0111538_113660742	3300009156	Populus Rhizosphere	MPGYIAMKKLAVIAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQAEALDKQYKKMMDRNRKESDAQQRSDPWSNMRAPNEGKGK*
Ga0111538_121207741	3300009156	Populus Rhizosphere	LGTLTAPAFAQSKDMEPLELMDRDKKQQADVVDKQYKKMMDRNRKEGENQKSDPWSNMRAPNEGKGK*
Ga0075423_102376512	3300009162	Populus Rhizosphere	MPGYIAMKKLAVTAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQADVVDKQYKKMMDRNRKEGENQKSDPWSNMRAPNEGKGK*
Ga0075423_117820742	3300009162	Populus Rhizosphere	MPGYIAMKKLAVIAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQAEALDKQYKKMMDRNRKESENQKSDPWSNMRAPNEGKGK*
Ga0105241_115041021	3300009174	Corn Rhizosphere	MPGYIVMKKLAVTAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQADVVDKQYKKMMDRNRKEGENQKSDPWSNMRAPNEGKGK*
Ga0105249_104201822	3300009553	Switchgrass Rhizosphere	AVTAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQADAVDKQYKKMMDRNRKESENQKSDPWSNMRAPNEGKGK*
Ga0126374_100170824	3300009792	Tropical Forest Soil	MPGYIAMKKLAVTAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQAEALDKQYKKMMDRNRKESDAQQRSDPWSNMRAPNEGKGK*
Ga0126380_103142091	3300010043	Tropical Forest Soil	MPGYIAMKKLAVTAFMLGTLTAPAFAQGKDMEPLELMDRDKKQQAEALDKQYKKMMDRNRKESDAQQRSDPWSNMRTPNEGKGK*
Ga0126384_100163075	3300010046	Tropical Forest Soil	MPGYIAMKKLAVTAFILGTLTAPAFAQSKDMEPLELMDRDKKQQAEALDKQYKKMMDRNRKESDAQQRSDPWSNMRAPNEGKGK*
Ga0126370_101987252	3300010358	Tropical Forest Soil	MLGHIAMKKLAVTAFMLGILTAPAFAQSKDMEPLELLDRDKKQQAEAIDKQYKKMMDRNRKEGETQQRSDPWSNMRAPNEGKGK*
Ga0126376_103417562	3300010359	Tropical Forest Soil	MPGYIAMKKLAVTAFMLGTLTAPAFAQGKDMEPLELLDRDKKQQAEALDKQYKKMMDRNRKESDAQQRSDPWSNMRTPNEGKGK*
Ga0126378_104305822	3300010361	Tropical Forest Soil	MLGHIAMKKLVTAFMLGILTAPAFAQSKNMEPLELLDRDKKQQAEAIDKQYKKMMDRNRKEGETQQRSDPWSNMRAPNEGKGK*
Ga0105239_102140031	3300010375	Corn Rhizosphere	SAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQADAVDKQYKKMMDRNRKESENQKSDPWSNMRAPNEGKGK*
Ga0134122_100692522	3300010400	Terrestrial Soil	MTPGHIAMKKIAMTAFMLGILTAPAFAQGKESEPLEILDRDKKMQAEALDRQYKKMMDRNRKEGDAQKSDPWSNMRTPNEGKGK*
Ga0137376_108468061	3300012208	Vadose Zone Soil	MIALPKLPGRIAMKKHVATTVMLGLLTVPAFAQQGKDSEPLEILDRDKRQQAEALDKQYKRTMERNRKEGDATRTDPWSNMRTPNEGKNK*
Ga0157348_10059112	3300012479	Unplanted Soil	MTGYIAMKKLAVTAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQADVVDKQYKKMMDRNRKEGENQKSDPWSNM
Ga0157319_10291492	3300012497	Arabidopsis Rhizosphere	SMPGYIAMKKLAVTAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQADAVDKQYKKLMDRNRKESENQKSDPWSNMRAPNEGKGK*
Ga0157339_10506081	3300012505	Arabidopsis Rhizosphere	MPGYIAMKKLAVTAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQADALDKQYKKLMDRNRKESENQKSDPW
Ga0157315_10049061	3300012508	Arabidopsis Rhizosphere	MLGYIAMKKLAMTAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQADAVDKQYKKLMDRNRKESENQKSDPWSNMRAPNEGKGK*
Ga0164301_117646931	3300012960	Soil	LAITAFMLGILTAPAFAQGKESEPLEILDRDKRQQAEALDKQYKRMMERNRKEGDAQKSDPWSNMRAPNEGKGK*
Ga0164302_100674724	3300012961	Soil	MKKLVITAFMLGILTAPAFAQGKESEPLEILDRDKRQQAEALDKQYKRMMERNRKEGDAQKSDPWSNMRAPNEGKGK*
Ga0126369_100110232	3300012971	Tropical Forest Soil	MKKLAVTAFVLGTLTAPAFAQSKDMEPLELMDRDKKQQAEALDKQYKKMMDRNRKESDAQQRSDPWSNMRAPNEGKGK*
Ga0126369_102451482	3300012971	Tropical Forest Soil	VQDFTVIDRSYDHDSLDWMPGHIAMKKLAVTAFMLGILTVPAFAQGKDSEPLEIQDRDKKQQAEALDKQYKKMMDRNRKDGETQQRSDPWSNMRTPNEGKGK*
Ga0164309_102955721	3300012984	Soil	MKKLAITAFMLGILTAPAFAQGKESEPLEILDRDKRQQAAAVDKQYKRMMERNRKEGDAQKSDPWSNMRAPNEGKGK*
Ga0164307_106802152	3300012987	Soil	MLGYIAVKKLAVTAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQAEALDKQYKKMMDRNRKESDAQQRSDPWSNMRAPNEGKGK*
Ga0164306_120149972	3300012988	Soil	TLTAPAFAQSKDMEPLELMDRDKKQQAEALDKQYKKMMDRNRKESDAQQRSDPWSNMRAPNEGKGK*
Ga0163163_131066891	3300014325	Switchgrass Rhizosphere	LTAPAFAQSKDMEPLELMDRDKKQQADALDKQYKKLMDRNRKESENQKSDPWSNMRAPNEGKGK*
Ga0157377_102250952	3300014745	Miscanthus Rhizosphere	MPGYIAMKKLAVSAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQADAVDKQYKKLMDRNRKESENQKSDPWSNMRAPNEGKGK*
Ga0132258_117226852	3300015371	Arabidopsis Rhizosphere	MPGYIAMKKLAVTAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQADAVDKQYKKLMDRNRKESENQKSDPWSNMRAPNEGKGK*
Ga0132256_1007471242	3300015372	Arabidopsis Rhizosphere	AVTAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQADVVDKQYKKMMDRNRKEGENQKSDPWSNMRAPNEGKGK*
Ga0132255_1026040642	3300015374	Arabidopsis Rhizosphere	MLGYIAMKKLAVTAFMLVTLTAPAFAQSKDMEPLELMDRDKKQQADVVDKQYKKMMDRNRKEGENQKSDPWSNMRAPNEGKGK*
Ga0163161_109293381	3300017792	Switchgrass Rhizosphere	SYRHDSLRSMPGYIAMKKLAVTAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQADAVDKQYKKMMDRNRKESENQKSDPWSNMRAPNEGKGK
Ga0187786_104098131	3300017944	Tropical Peatland	HPYRHDSLDWMPGHITMKKLAMTAFMLGTLTAPAFAQGKDMEPLELMDRDKKQQADVVDKQYKKMMDRNRKDGENQKSDPWSNMRAPNEGKGK
Ga0187785_102234972	3300017947	Tropical Peatland	MKKLAMTAFMLGTLTAPAFAQGKDMEPLELMDRDKKQQADVVDKQYKKMMDRNRKDGENQKSDPWSNMRAPNEGKGK
Ga0184608_103790342	3300018028	Groundwater Sediment	MKKHVATTVMLGLLTVPAFAQQGKDSEPLEILDRDKRQQAEALDKQYKRMMDRTRKDSDTPRSDPWANMRAPADGK
Ga0187765_100050363	3300018060	Tropical Peatland	MKKLAVTAFMLGVLTVPAFAQGKDMEPLELMDRDKKQQADVVDKQYKKMMDRNRKDGENQKSDPWSNMRAPNEGKGK
Ga0184625_104029871	3300018081	Groundwater Sediment	MLGIVTAPAFAQGKESEPLEILDRDKKLQAEALDKQYKRMMERNRKEGETQRADPWSNMRAPNEGKGK
Ga0193721_11280822	3300020018	Soil	MKKHVATTVMLGLLTVPAFAQQGKDSEPLEILDRDKRQQAEALDKQYKRTMERNRKEGDATRTDPWSNMRTPNEGKNK
Ga0126371_101641762	3300021560	Tropical Forest Soil	MKKLVTAFMLGILTAPAFAQSKNMEPLELLDRDKKQQAEAIDKQYKKMMDRNRKEGETQQRSDPWSNMRAPNEGKGK
Ga0126371_104284742	3300021560	Tropical Forest Soil	MKKLAVTAFMLGILTVPAFAQGKDSEPLEIQDRDKKQQAEALDKQYKKMMDRNRKDGETQQRSDPWSNMRTPNEGKGK
Ga0222622_101662543	3300022756	Groundwater Sediment	MKKLVATAFMLGIVTAPAFAQGKESEPLEILDRDKKLQAEALDKQYKRMMERNRKEGETQRADPW
Ga0207697_102750421	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MKKLAVSAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQAEALDKQYKKMMDRNRKESDAQQRSDPWSNMRAPN
Ga0207647_104767342	3300025904	Corn Rhizosphere	MKKLAVTAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQADAVDKQYKKMMDRNRKESDAQQRSDPWSNMRAPNEGKGK
Ga0207699_104538862	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MKKLAVIAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQAEALDKQYKKMMDRNRKESDAQQRSDPWSNMRAPNEGKGK
Ga0207657_100729492	3300025919	Corn Rhizosphere	MKKLAVTAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQADALDKQYKKLMDRNRKESENQKSDPWSNMRAPNEGKGK
Ga0207665_110789951	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	LSRSYRHDSLRWMPGYIAMKKLAVIAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQAEALDKQYKKMMDRNRKESDAQQRSDPWSNMRAPNEGKGK
Ga0207711_113550411	3300025941	Switchgrass Rhizosphere	LTAPAFAQSKDMEPLELMDRDKKQQADVVDKQYKKMMDRNRKEGENQKSDPWSNMRAPNEGKGK
Ga0207661_111847572	3300025944	Corn Rhizosphere	MKKLAVSAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQADVVDKQYKKMMDRNRKEGENQKSDPWSNMRAPNEGKGK
Ga0207661_114529551	3300025944	Corn Rhizosphere	FMLGTLTAPAFAQSKDMEPLELMDRDKKQQADALDKQYKKLMDRNRKESENQKSDPWSNMRAPNEGKGK
Ga0207639_107058161	3300026041	Corn Rhizosphere	APAFAQSKDMEPLELMDRDKKQQAEALDKQYKKMMDRNRKESENQKSDPWSNMRAPNEGKGK
Ga0209465_100076706	3300027874	Tropical Forest Soil	MPGYIAMKKLAVTAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQAEALDKQYKKMMDRNRKESDAQQRSDPWSNMRAPNEGKGK
Ga0209069_103394632	3300027915	Watersheds	MTPGHIAMKKIAVTAFMLGILTAPAFAQGKDSEPLEILDRDKKMQAEALDKQYKKMIDRNRKEGDAQKSDPWSNMRAPNESKGK
Ga0268265_105620892	3300028380	Switchgrass Rhizosphere	MPGYIVMKKLAVSAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQADALDKQYKKLMDRNRKESENQKSDPWSNMRAPNEGKGK
Ga0268264_110739832	3300028381	Switchgrass Rhizosphere	MKKLAITAFMLGILTAPAFAQGKESEPLEILDRDKRQQAEAVDKQYKRMMERNRKEGDAQKSDPWSNMRAPNEGKGK
Ga0307293_101062702	3300028711	Soil	TVMLGLLTVPAFAQQGKDSEPLEILDRDKRQQAEALDKQYKRTMERNRKEGDATRTDPWSNMRTPNEGKNK
Ga0307317_101589081	3300028720	Soil	GRIAMKKHVATTVMLGLLTVPAFAQQGKDSEPLEILDRDKRQQAEALDKQYKRTMERNRKEGDATRTDPWSNMRTPNEGKNK
Ga0307319_102607022	3300028722	Soil	MIALPKLPGRIAMKKHVATAVMLGLLTVPAFAQQGKDSEPLEILDRDKRQQAEALDKQYKRTMERNRKEGDATRTDPWSNMRTPNEGKNK
Ga0307290_101958111	3300028791	Soil	MKKLVATAFMLGIVTAPAFAQGKESEPLEILDRDKKLQAEALDKQYKRMMERNRKEGETQRADPWSNMLAPNE
Ga0307305_100008734	3300028807	Soil	MKKHVATAVMLGLLTVPAFAQQGKDSEPLEILDRDKRQQAEALDKQYKRTMERNRKEGDATRTDPWSNMRTPNEGKNK
Ga0307292_100733112	3300028811	Soil	MKKHVATTVMLGLLTVPAFAQQGKDSEPLEILDRDKRQQAEALDKQYKRTMERNRKEGDATRTDPWSNMRTPNEGKN
Ga0307286_100438803	3300028876	Soil	TAFMLGIVTAPAFAQGKESEPLEILDRDKKLQAEALDKQYKRMMERNRKEGETQRADPWSNMRAPNEGKGK
Ga0308190_11445761	3300030993	Soil	VMLGLLTVPAFAQQGKDSEPLEILDRDKRQQAEALDKQYKRTMERNRKEGDATRTDPWSNMRTPNEGKNK
Ga0307497_100650871	3300031226	Soil	MPGYIAMKKLAVTAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQADAVDKQYKKLMDRNRKESENQKSDPWSNMRAPNEGKGK
Ga0170824_1075442612	3300031231	Forest Soil	MKKLVATAFMLGIVTAPAFAQGKESEPLEILERDKKLQAEALDKQYKRMMERNRKEGETQRADPWSNMRAPNEGKGK
Ga0308194_102159772	3300031421	Soil	MIAMKKLVATAFMLGIVTAPAFAQGKESEPLEILDRDKKLQAEALDKQYKRMMERNRKEGETQRADPWSNMRAPNEGKGK
Ga0308194_103220501	3300031421	Soil	AMKKHVATTVMLGLLTVPAFAQQGKDSEPLEILDRDKRQQAEALDKQYKRTMERNRKEGDATRTDPWSNMRTPNEGKNK
Ga0310888_101701242	3300031538	Soil	MPGYIAMKKLAVTAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQADALDKQYKKLMDRNRKESENQKSDPWSNMRAPNEGKGK
Ga0318516_100016992	3300031543	Soil	MKKLVVTAFMLGILTAPAFAQSKDMEPLELLDRDKKQQAEAIDKQYKKMMDRNRKEGETQQRSDPWSNMRAPNEGKGK
Ga0318572_103861762	3300031681	Soil	TAFMLGILTAPAFAQSKDMEPLELLDRDKKQQAEAIDKQYKKMMDRNRKEGETQQRSDPWSNMRAPNEGKGK
Ga0318501_104783481	3300031736	Soil	MIPLTGMPGHIAMKKLVVTAFMLGILTAPAFAQSKDMEPLELLDRDKKQQAEAIDKQYKKMMDRNRKEGETQQRSDPWSNMRAPNEGKEK
Ga0307468_1012819092	3300031740	Hardwood Forest Soil	MKKLAITAFMLGILTAPAFAQGKESEPLEILDRDKRQQAEALDKQYKRMMERNRKEGDAQKSDPWSNMRAPNEGKGK
Ga0310907_100531712	3300031847	Soil	MKKLAVTAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQADAVDKQYKKLMDRNRKESENQKSDPWSNMRAPNEGKGK
Ga0310892_100583743	3300031858	Soil	LAVTAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQADALDKQYKKLMDRNRKESENQKSDPWSNMRAPNEGKGK
Ga0318551_100482002	3300031896	Soil	MKKLVVTAFMLGILTAPAFAQSKDMEPLELLDRDKKQQAEAIDKQYKKMMDRNRKEGETQQRSDPWSNMRAPNEGKEK
Ga0310901_102798631	3300031940	Soil	HDSLRSMPGYIAMKKLAVTAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQADAVDKQYKKLMDRNRKESENQKSDPWSNMRAPNEGKGK
Ga0310910_1000012314	3300031946	Soil	MIPLTGMPGHIAMKKLVVTAFMLGILTAPAFAQSKDMEPLELLDRDKKQQAEAIDKQYKKMMDRNRKEGETQQRSDPWSNMRAPNEGKGK
Ga0318549_101865202	3300032041	Soil	MKKLVVTAFMLGILTAPAFAQSKDMEPLELLDRDKKQQAEAIDKQYKKMMDRNRKEGETQQRSDPWSNMRAPNEGKG
Ga0318553_106196971	3300032068	Soil	KKLVVTAFMLGILTAPAFAQSKDMEPLELLDRDKKQQAEAIDKQYKKMMDRNRKEGETQQRSDPWSNMRAPNEGKEK
Ga0318518_100366623	3300032090	Soil	VVTALLLGILTAPAFAQSKDMEPLELLDRDKKQQAEAIDKQYKKMMDRNRKEGETQQRSDPWSNMRAPNEGKGK
Ga0307472_1000133074	3300032205	Hardwood Forest Soil	MKKLAVIAFMLGTLTAPAFAQSKDMEPLELMDRDKKQQADAVDKQYKKMMDRNRKESENQKSDPWSNMRAPNEGKGK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F068087

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences