Metagenome / Metatranscriptome Family F068064

Overview

Basic Information

• Family ID: F068064
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 125
• Average Sequence Length: 42 residues
• Representative Sequence: VRKNYQRKVRKSNHKFEVVGGQELLVRVPLPMAEVWAEMQA
• Number of Associated Samples: 104
• Number of Associated Scaffolds: 125

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 96.00 %
• % of genes near scaffold ends (potentially truncated): 82.40 %
• % of genes from short scaffolds (< 2000 bps): 80.00 %
• Associated GOLD sequencing projects: 102
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.22

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (89.600 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.400 % of family members)
• Environment Ontology (ENVO): Unclassified (30.400 % of family members)
• Earth Microbiome Project Ontology (EMPO): Free-living → Non-saline → Soil (non-saline) (48.800 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 18.84%
  β-sheet: 0.00%
  Coil/Unstructured: 81.16%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF07676	PD40	3.20
PF13620	CarboxypepD_reg	2.40
PF00872	Transposase_mut	2.40
PF01695	IstB_IS21	2.40
PF00072	Response_reg	1.60
PF17131	LolA_like	1.60
PF13936	HTH_38	1.60
PF00893	Multi_Drug_Res	0.80
PF13506	Glyco_transf_21	0.80
PF14534	DUF4440	0.80
PF08592	Anthrone_oxy	0.80
PF05985	EutC	0.80
PF00691	OmpA	0.80
PF13649	Methyltransf_25	0.80
PF00069	Pkinase	0.80
PF12704	MacB_PCD	0.80
PF01699	Na_Ca_ex	0.80
PF12697	Abhydrolase_6	0.80
PF04366	Ysc84	0.80
PF00882	Zn_dep_PLPC	0.80
PF13378	MR_MLE_C	0.80
PF00326	Peptidase_S9	0.80
PF13365	Trypsin_2	0.80
PF13590	DUF4136	0.80
PF00665	rve	0.80
PF02927	CelD_N	0.80
PF01475	FUR	0.80
PF12680	SnoaL_2	0.80
PF05598	DUF772	0.80
PF13545	HTH_Crp_2	0.80
PF07992	Pyr_redox_2	0.80
PF01609	DDE_Tnp_1	0.80
PF08818	DUF1801	0.80
PF13560	HTH_31	0.80
PF04191	PEMT	0.80
PF11154	DUF2934	0.80
PF14559	TPR_19	0.80
PF04972	BON	0.80
PF12146	Hydrolase_4	0.80
PF03992	ABM	0.80
PF00180	Iso_dh	0.80
PF01833	TIG	0.80

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.20
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	2.40
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	2.40
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.80
COG0387	Cation (Ca2+/Na+/K+)/H+ antiporter ChaA	Inorganic ion transport and metabolism [P]	0.80
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	0.80
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	0.80
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.80
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.80
COG4584	Transposase	Mobilome: prophages, transposons [X]	0.80
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	0.80
COG4302	Ethanolamine ammonia-lyase, small subunit	Amino acid transport and metabolism [E]	0.80
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.80
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	0.80
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.80
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.80
COG2930	Lipid-binding SYLF domain, Ysc84/FYVE family	Lipid transport and metabolism [I]	0.80
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	0.80
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	0.80
COG2076	Multidrug transporter EmrE and related cation transporters	Defense mechanisms [V]	0.80
COG0735	Fe2+ or Zn2+ uptake regulation protein Fur/Zur	Inorganic ion transport and metabolism [P]	0.80
COG0530	Ca2+/Na+ antiporter	Inorganic ion transport and metabolism [P]	0.80

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.60 %
Unclassified	root	N/A	10.40 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	89.60 %
Unclassified	root	N/A	10.40 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	89.60 %
Unclassified	root	N/A	10.40 %

Level 4

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	67.20 %
Unclassified	root	N/A	10.40 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.20 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.80 %

Level 5

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	38.40 %
Unclassified	root	N/A	10.40 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	4.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.20 %
Deinococcus-Thermus	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus	0.80 %

Level 6

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	38.40 %
Unclassified	root	N/A	10.40 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	3.20 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.20 %
Deinococci	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci	0.80 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.80 %

Level 7

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	38.40 %
Unclassified	root	N/A	10.40 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3.20 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.20 %
Thermales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales	0.80 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.80 %

Level 8

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	38.40 %
Unclassified	root	N/A	10.40 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.20 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.80 %
Thermaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae	0.80 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.80 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.80 %

Level 9

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	38.40 %
Unclassified	root	N/A	10.40 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	3.20 %
Meiothermus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Meiothermus	0.80 %
Edaphobacter aggregans	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	0.80 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.80 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	0.80 %

Associated Scaffolds

Scaffold	Taxonomy	Length
2032320005|FACEOR_FY84VJD01B2H5L	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507
2088090014|GPIPI_17268428	All Organisms → cellular organisms → Bacteria → Acidobacteria	3798
2170459024|GZRSKLJ01CBN2H	All Organisms → cellular organisms → Bacteria → Acidobacteria	503
3300001593|JGI12635J15846_10359955	Not Available	889
3300005367|Ga0070667_100308997	All Organisms → cellular organisms → Bacteria → Acidobacteria	1425
3300005445|Ga0070708_100019392	All Organisms → cellular organisms → Bacteria → Proteobacteria	5714
3300005445|Ga0070708_100250851	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1663
3300005610|Ga0070763_10035336	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2309
3300005764|Ga0066903_101271422	Not Available	1372
3300005841|Ga0068863_101743336	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	632
3300006052|Ga0075029_100075334	All Organisms → cellular organisms → Bacteria → Acidobacteria	1991
3300006173|Ga0070716_100331242	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1070
3300006854|Ga0075425_100182517	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2410
3300006854|Ga0075425_100568583	All Organisms → cellular organisms → Bacteria	1305
3300006871|Ga0075434_101681677	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	642
3300006893|Ga0073928_10094238	All Organisms → cellular organisms → Bacteria	2527
3300006914|Ga0075436_100868657	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	674
3300009038|Ga0099829_11249243	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615
3300009792|Ga0126374_10254658	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1148
3300010046|Ga0126384_12253728	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	525
3300010048|Ga0126373_10175116	All Organisms → cellular organisms → Bacteria	2060
3300010048|Ga0126373_10218599	Not Available	1857
3300010048|Ga0126373_10220017	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1851
3300010159|Ga0099796_10402871	Not Available	600
3300010339|Ga0074046_10235207	All Organisms → cellular organisms → Bacteria	1142
3300010358|Ga0126370_11526136	All Organisms → cellular organisms → Bacteria → Acidobacteria	636
3300010360|Ga0126372_12613070	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556
3300010376|Ga0126381_101900996	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	858
3300010376|Ga0126381_102150678	All Organisms → cellular organisms → Bacteria → Acidobacteria	803
3300010376|Ga0126381_102847661	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	690
3300010376|Ga0126381_102966104	All Organisms → cellular organisms → Bacteria	675
3300011120|Ga0150983_10995189	All Organisms → cellular organisms → Bacteria → Acidobacteria	584
3300011271|Ga0137393_10289728	All Organisms → cellular organisms → Bacteria → Acidobacteria	1393
3300012361|Ga0137360_10734560	All Organisms → cellular organisms → Bacteria → Acidobacteria	848
3300012363|Ga0137390_10510642	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter → Edaphobacter aggregans	1175
3300012984|Ga0164309_10305450	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1149
3300012984|Ga0164309_11538727	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	569
3300012987|Ga0164307_10866422	All Organisms → cellular organisms → Bacteria → Acidobacteria	724
3300014158|Ga0181521_10372239	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	711
3300014164|Ga0181532_10005285	All Organisms → cellular organisms → Bacteria → Proteobacteria	11017
3300015371|Ga0132258_10694936	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	2560
3300016319|Ga0182033_10004522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Deinococcus-Thermus → Deinococci → Thermales → Thermaceae → Meiothermus	7340
3300016341|Ga0182035_10308127	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1301
3300016371|Ga0182034_11258028	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	645
3300016371|Ga0182034_11530201	All Organisms → cellular organisms → Bacteria	585
3300016422|Ga0182039_10026697	All Organisms → cellular organisms → Bacteria	3648
3300016422|Ga0182039_10090446	All Organisms → cellular organisms → Bacteria → Acidobacteria	2229
3300017822|Ga0187802_10218040	All Organisms → cellular organisms → Bacteria	735
3300017822|Ga0187802_10254044	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	681
3300017929|Ga0187849_1025058	All Organisms → cellular organisms → Bacteria	3222
3300017931|Ga0187877_1023882	All Organisms → cellular organisms → Bacteria	3216
3300017933|Ga0187801_10029540	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1916
3300017933|Ga0187801_10171398	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	852
3300017940|Ga0187853_10025699	All Organisms → cellular organisms → Bacteria	3203
3300017955|Ga0187817_10593745	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	707
3300017955|Ga0187817_10899156	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	566
3300018004|Ga0187865_1319593	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	510
3300018029|Ga0187787_10449283	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	519
3300019786|Ga0182025_1328179	All Organisms → cellular organisms → Bacteria → Proteobacteria	2598
3300019890|Ga0193728_1115770	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1221
3300020004|Ga0193755_1166544	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	657
3300020582|Ga0210395_11107762	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	584
3300021168|Ga0210406_10443178	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1034
3300021170|Ga0210400_11255616	All Organisms → cellular organisms → Bacteria → Acidobacteria	595
3300021171|Ga0210405_10029928	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	4366
3300021180|Ga0210396_10048441	All Organisms → cellular organisms → Bacteria	3897
3300021181|Ga0210388_10020660	All Organisms → cellular organisms → Bacteria	5328
3300021401|Ga0210393_10618501	Not Available	884
3300021404|Ga0210389_10096580	All Organisms → cellular organisms → Bacteria → Acidobacteria	2273
3300021406|Ga0210386_10154089	All Organisms → cellular organisms → Bacteria	1923
3300021420|Ga0210394_11469502	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577
3300021432|Ga0210384_10012229	All Organisms → cellular organisms → Bacteria	8617
3300021432|Ga0210384_11905376	All Organisms → cellular organisms → Bacteria → Acidobacteria	500
3300021479|Ga0210410_10018024	All Organisms → cellular organisms → Bacteria	6099
3300021559|Ga0210409_10177392	All Organisms → cellular organisms → Bacteria → Proteobacteria	1946
3300021560|Ga0126371_10458065	All Organisms → cellular organisms → Bacteria → Acidobacteria	1422
3300022529|Ga0242668_1111198	All Organisms → cellular organisms → Bacteria → Acidobacteria	567
3300022557|Ga0212123_10091927	All Organisms → cellular organisms → Bacteria → Acidobacteria	2511
3300024227|Ga0228598_1114753	All Organisms → cellular organisms → Bacteria → Acidobacteria	546
3300024245|Ga0247677_1038390	Not Available	694
3300025910|Ga0207684_10169175	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1884
3300025933|Ga0207706_10359838	All Organisms → cellular organisms → Bacteria → Acidobacteria	1264
3300026310|Ga0209239_1053720	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1808
3300026316|Ga0209155_1200833	All Organisms → cellular organisms → Bacteria → Acidobacteria	628
3300026557|Ga0179587_10131829	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1544
3300027174|Ga0207948_1007756	Not Available	1225
3300027587|Ga0209220_1178810	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	543
3300027698|Ga0209446_1100854	All Organisms → cellular organisms → Bacteria	741
3300027853|Ga0209274_10328470	Not Available	787
3300027889|Ga0209380_10088978	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1777
3300027889|Ga0209380_10302408	All Organisms → cellular organisms → Bacteria	939
3300028047|Ga0209526_10754019	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	608
3300028906|Ga0308309_11385711	All Organisms → cellular organisms → Bacteria	603
3300030843|Ga0075392_11184738	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	517
3300031057|Ga0170834_112089534	All Organisms → cellular organisms → Bacteria	1799
3300031128|Ga0170823_14885218	Not Available	569
3300031128|Ga0170823_15782432	Not Available	530
3300031231|Ga0170824_127020710	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	750
3300031446|Ga0170820_14967580	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	646
3300031573|Ga0310915_10405271	All Organisms → cellular organisms → Bacteria → Acidobacteria	968
3300031573|Ga0310915_10606888	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	775
3300031668|Ga0318542_10442883	All Organisms → cellular organisms → Bacteria → Acidobacteria	673
3300031708|Ga0310686_108413421	All Organisms → cellular organisms → Bacteria	1121
3300031708|Ga0310686_117538713	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	623
3300031720|Ga0307469_10649189	All Organisms → cellular organisms → Bacteria → Acidobacteria	950
3300031720|Ga0307469_10731792	Not Available	900
3300031720|Ga0307469_11327240	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	684
3300031740|Ga0307468_101058538	All Organisms → cellular organisms → Bacteria → Acidobacteria	719
3300031753|Ga0307477_10826581	All Organisms → cellular organisms → Bacteria	614
3300031765|Ga0318554_10490184	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	696
3300031770|Ga0318521_10376217	All Organisms → cellular organisms → Bacteria → Acidobacteria	844
3300031771|Ga0318546_10197214	All Organisms → cellular organisms → Bacteria → Acidobacteria	1374
3300031782|Ga0318552_10563150	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	582
3300031796|Ga0318576_10635426	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	503
3300031823|Ga0307478_11429021	All Organisms → cellular organisms → Bacteria	573
3300031833|Ga0310917_10100625	Not Available	1860
3300031962|Ga0307479_10009352	All Organisms → cellular organisms → Bacteria → Acidobacteria	9086
3300031962|Ga0307479_10135801	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2407
3300032001|Ga0306922_11893725	All Organisms → cellular organisms → Bacteria → Acidobacteria	584
3300032090|Ga0318518_10630893	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	546
3300032174|Ga0307470_10735536	Not Available	756
3300032782|Ga0335082_10416413	All Organisms → cellular organisms → Bacteria → Acidobacteria	1207
3300033134|Ga0335073_10541703	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1317
3300033290|Ga0318519_10021022	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	2920
3300033977|Ga0314861_0177203	All Organisms → cellular organisms → Bacteria → Acidobacteria	1023

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.80%
Host-Associated	Host-Associated	7.20%

Class

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	80.00%
Aquatic	Environmental → Aquatic	12.80%
Plants	Host-Associated → Plants	7.20%

Category

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	80.00%
Freshwater	Environmental → Aquatic → Freshwater	10.40%
Rhizosphere	Host-Associated → Plants → Rhizosphere	5.60%
Thermal Springs	Environmental → Aquatic → Thermal Springs	1.60%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.60%
Sediment	Environmental → Aquatic → Sediment	0.80%

Type

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	62.40%
Loam	Environmental → Terrestrial → Soil → Loam	12.80%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	10.40%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.00%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	1.60%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.80%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.80%

Subtype

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	39.20%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	21.60%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.80%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.60%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	4.80%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.00%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.20%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	1.60%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.80%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.80%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.80%

Habitat

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.40%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.60%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.60%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	4.80%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	4.00%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.00%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.00%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.20%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.20%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	3.20%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	1.60%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	1.60%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.60%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	0.80%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.80%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.80%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.80%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.80%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.80%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.80%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.80%

Associated Samples

Taxon OID	Sample Name	Habitat Type
2032320005	Soil microbial communities from sample at FACE Site 5 Oak Ridge CO2-	Environmental
2088090014	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental
2170459024	Grass soil microbial communities from Rothamsted Park, UK - FD1 (NaCl 300g/L 5ml)	Environmental
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental
3300014158	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_60_metaG	Environmental
3300014164	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaG	Environmental
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental
3300017929	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_100	Environmental
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental
3300017933	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_1	Environmental
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental
3300018004	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_100	Environmental
3300018029	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP06_20_MG	Environmental
3300019786	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (PacBio error correction)	Environmental
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental
3300020004	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H1a2	Environmental
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental
3300021401	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O	Environmental
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental
3300022529	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental
3300022557	Paint Pots_combined assembly	Environmental
3300024227	Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4	Host-Associated
3300024245	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK18	Environmental
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental
3300027174	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF040 (SPAdes)	Environmental
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental
3300027698	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM2 (SPAdes)	Environmental
3300027853	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)	Environmental
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental
3300030843	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - OB2 EcM (Eukaryote Community Metatranscriptome)	Environmental
3300031057	Oak Coassembly Site 11 - Champenoux / Amance forest	Environmental
3300031128	Oak Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental
3300031446	Fir Summer Coassembly Site 11 - Champenoux / Amance forest	Environmental
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental
3300033977	Tropical peat soil microbial communities from peatlands in Loreto, Peru - SJ75	Environmental

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FACEORA_4467340	2032320005	Soil	VKHKYQRQERKSNHKFEVVRGQELLVRVPLPMAEVWAEIQAQVEQLTGKP
GPIPI_03181620	2088090014	Soil	VKKNYQRKERKSNHKFEVVRGQELLVRVPLPMAEVWAEMQ
FD1_08659240	2170459024	Grass Soil	VGNKYQRKERKSNHKFEVVGGQELMVRMPLPMAEVWAEMQAQVAELTGQAG
JGI12635J15846_103599552	3300001593	Forest Soil	VXKKYQRKQRKSNRKFEIVRGQELMVQVPLPIAEVWSELQTQVEEL
Ga0070667_1003089971	3300005367	Switchgrass Rhizosphere	VRNKYQRKEHKSNHKFEVVGGQELLVRVPLPMAEVWRRCKRR*
Ga0070708_1000193926	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VKRNYRRKAHKSNHKFEAVGEQELLVRVPLPMAEVRAVN*
Ga0070708_1002508512	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VKRNYQRKAHKSNHKFEAVGEQELLVRVPLPMAEVRAAN*
Ga0070763_100353361	3300005610	Soil	VRNKYQSKDHKSNPKFEVVRGQELLVQVPLPIAEVWSELQAQV
Ga0066903_1012714223	3300005764	Tropical Forest Soil	VKKNYQRKDRKSNHKFEIVGGQELLVRVPLPMAEVW
Ga0068863_1017433361	3300005841	Switchgrass Rhizosphere	VRHKYQRQERKSNHKLEIVRGQELLVRVPLPMAEVW
Ga0075029_1000753342	3300006052	Watersheds	VRGNYQKKDRKSNHNFEVVRGQKLMVRLLLPMVEVWPRRKRR*
Ga0070716_1003312422	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	FLKERAAVKKNYQRKERKSNHKFEIVRGQELLMRVPLPMAEVWA*
Ga0075425_1001825171	3300006854	Populus Rhizosphere	VRQKYQRQERKSNHKLEMVRGQELLVRVPLPMAELWVEMQAQVEQLTGQAGL
Ga0075425_1005685831	3300006854	Populus Rhizosphere	VRKKYQSKERKSNHKFEVVRGQELMVRVPLPMAEV*
Ga0075434_1016816771	3300006871	Populus Rhizosphere	VKKNYQRKERKSNHKLEIVRGQELLVRVPLPMAEVW
Ga0073928_100942381	3300006893	Iron-Sulfur Acid Spring	VRKERKSNHKFEVVGGQELMVRVPLPLAEVWAEMQAQVEEL
Ga0075436_1008686572	3300006914	Populus Rhizosphere	VKKKYQSREHKSNPKFEIVRGQKLLVQVPLPMAEVWAEMQARVEELTGQA
Ga0099829_112492432	3300009038	Vadose Zone Soil	VRNNYQTKDRKSNHKFEVVRGQELLVRVPLPMAEVWAEMQAQVEELTG
Ga0126374_102546582	3300009792	Tropical Forest Soil	VKKNYQRKGRKSNHKFEVVRGQELLVQVPLPMAEMWAEM
Ga0126384_122537282	3300010046	Tropical Forest Soil	VKNKYQRKERKSNHKFEVVGEQELLVRVPLPMAEVWAEMQAQV
Ga0126373_101751164	3300010048	Tropical Forest Soil	VRKNYQRKARKSNHKFEVVGGQELLVRVPLPMAEVWA
Ga0126373_102185993	3300010048	Tropical Forest Soil	VRQKYQREVRKSNHKFEIVRGQELLVRVPLPMAEVWA
Ga0126373_102200172	3300010048	Tropical Forest Soil	VRKKYQRQVRKSNHKFEVVRGQELMVRVPLPLAEVWAEMQTQLG*
Ga0099796_104028711	3300010159	Vadose Zone Soil	VKRNYQRKERKSNHKFEVVRGQELLVRVPLPMAEV
Ga0074046_102352073	3300010339	Bog Forest Soil	VRNNYQRKERKSNHKFEVVQGQELMVRVPLPMAEVWAEMQAQVEELT
Ga0126370_115261363	3300010358	Tropical Forest Soil	VRKNYQRKARKSNHKFEVVGEQELLVPLPMAEVWAEMQAQVE*
Ga0126372_126130701	3300010360	Tropical Forest Soil	VRKNYQRQTRKSNHKFEVVGGQELLVRVPLPMAEVWAEMQA
Ga0126381_1019009961	3300010376	Tropical Forest Soil	VRNKYQRQDRKSNHKFEVVRGQVLSVRVPLPMAEVWAEMQAQVEQL
Ga0126381_1021506782	3300010376	Tropical Forest Soil	VRKKYQRQVRKSNHKFEIVQGQDLLVRVPLPMAEVWAEMQARVEE
Ga0126381_1028476611	3300010376	Tropical Forest Soil	VKKKYQRKVCKSNHKFEIVQGRELLVRVPLPMAEVWAEMQARVEE
Ga0126381_1029661041	3300010376	Tropical Forest Soil	VRKNYQRKARKSNHKFEVVGGQELLVRVPLPMAEVWAEMQAH
Ga0150983_109951892	3300011120	Forest Soil	VRNNYQREVRKSNHKLEVVRGQELLVRVPLPMAEVWAEMQAQVEALAG*
Ga0137393_102897282	3300011271	Vadose Zone Soil	VRNKYQTKDRKSNHKFEVVRGQELLVRVPLPMAEVWAEMQAQV
Ga0137360_107345601	3300012361	Vadose Zone Soil	VRNKYQRKDRKSNHKFEIVGGQELLVRVPLPIAEVWAEMQAQVEELTG
Ga0137390_105106422	3300012363	Vadose Zone Soil	VRKNYQTKDRKSNHKFEVVRGKELLVRVPLPIAEVWAEMQAQVEELTGQAGL
Ga0164309_103054501	3300012984	Soil	VRNKYQRKERKSNPKLEVVGGQELLVRVPLPIAEVWAEMQA
Ga0164309_115387272	3300012984	Soil	VEKNYQRKEHKSNHKFEVAREQELMVRVPLPMAEVWAEMQTQV
Ga0164307_108664222	3300012987	Soil	VRNNYQREVRKSNHKLEVVRGQELLVRVPLPMAEVWAEMQAQVE
Ga0181521_103722392	3300014158	Bog	VRNKYQRKDRKSNHKFEIVQGQEMMVQVPLPMAEVGRDA
Ga0181532_100052851	3300014164	Bog	VRNKYQRKERKSNHKFEVVGEQELLVRVPLPIAEVWAEM
Ga0132258_106949363	3300015371	Arabidopsis Rhizosphere	VRKKYQRQEHKSNHKFEVLRGQGLLVGVPLPMAEVWAEMQAQVEELTARAFISY*
Ga0182033_100045221	3300016319	Soil	VKKNYQSKAHKSNHKFEVVGGQELLVRLPLPMAEVWA
Ga0182035_103081272	3300016341	Soil	VRKKYQSRKHKSNHKFEIVRGQELLVRVPLPMAEVWAEMQA
Ga0182034_112580281	3300016371	Soil	VRKNYQRKARKSNHKFEVVGGQELLVRVSLPMAEV
Ga0182034_115302011	3300016371	Soil	VRKNYQRKARKSNHKFEVVGEQELLVRVSLPMAEVW
Ga0182039_100266971	3300016422	Soil	KKNYQSKAHKSNHKFEVVGGQELLVRLPLPMAEVWAEMQA
Ga0182039_100904464	3300016422	Soil	VRKNYQRKDRKSNHKFEMVGRQELLVRVPLPMAEVWAEM
Ga0187802_102180402	3300017822	Freshwater Sediment	VRKNYQRKERKSNYKFEVVGGQELLVQVPLPMAEVWAEMQAKVEELADYQAFVNERSSH
Ga0187802_102540441	3300017822	Freshwater Sediment	VRNKYQRKDRKSNHKFEVVGGQELLVRVPLPIAEVWAEMQ
Ga0187849_10250581	3300017929	Peatland	VRNNYQRKERKFNHKFEVVGGQELLVQVPLPMAEVWAEMQAKVEELAGQAGL
Ga0187877_10238825	3300017931	Peatland	VRNNYQRKERKFNHKFEVVGGQELLVQVPLPMAEVWAEMQAKVEELAGQ
Ga0187801_100295403	3300017933	Freshwater Sediment	VRKNYQRKERKSNHKFEVIGGQELLVQVPLPCDAEIMK
Ga0187801_101713981	3300017933	Freshwater Sediment	VGKKYQSKERKSIHKFEIVRGQELLVQVPLPMAEVWAEMQA
Ga0187853_100256991	3300017940	Peatland	VRNNYQRKERKFNHKFEVVGGQELLVQVPLPMAEVWAEMQAKVEEL
Ga0187817_105937451	3300017955	Freshwater Sediment	VRNKYQRKERKSNRKFEVVGGQELLVRVPLPIAEVWAEMQAQVEE
Ga0187817_108991562	3300017955	Freshwater Sediment	VRKNYQRKERKSNYKFEVVGGQELLVQVPLPMAEVWAEMQAKVEELADYQAL
Ga0187865_13195931	3300018004	Peatland	VRNNYQRKERKSNHKFEVVGGQELLVQVPLPMAEVWAEMQAKVE
Ga0187787_104492831	3300018029	Tropical Peatland	VRKNYQRKAHKSNHKFEVVGGRELMVRVPLPMAEVWAEMQAKVEELAGRAGLQ
Ga0182025_13281796	3300019786	Permafrost	VRKKYQRKERKSNHKFEVVGGQELLVRVPLPLAQVWAEMQAQVEELTGMTDCRS
Ga0193728_11157702	3300019890	Soil	VKKNYQRKERKSNHKFEVVQGQELLVRVPLPMAEVW
Ga0193755_11665441	3300020004	Soil	VRNKYQRKDRKSNHKFEVVGGQELLVRVPLPIAEVWAE
Ga0210395_111077621	3300020582	Soil	VRNKYQRKERKSNPKLEVVGGQELLVRVPLPIVEVWAEM
Ga0210406_104431783	3300021168	Soil	VRNKYQRKERKSNPKLEVVGGQELLVRVPLPIAEVWAEMQAQ
Ga0210400_112556162	3300021170	Soil	VKKNYQRKERKSNHKFEARRALESLVRVPLPMAAVWVEMQAQKN
Ga0210405_100299284	3300021171	Soil	VRNKYQRKERKSNDKFEVVGGPELMVRVPLPMAEVWAEMQAQVEELTGHAG
Ga0210396_100484411	3300021180	Soil	VRKNYERKERKSNHTFEVVRGQELLVRVPLPMAEVWAEMQAKVEELT
Ga0210388_100206607	3300021181	Soil	VRNKYQRKQRKSNQKFEIVRGQELMVQVPLPIAEV
Ga0210393_106185012	3300021401	Soil	VRKKYQRKERKSNHKFEVVGGRELLVRVPLPLAEVWA
Ga0210389_100965801	3300021404	Soil	VRKNYQRKERKSNHKFEVVGGQELMVRVPLPIAEVW
Ga0210386_101540893	3300021406	Soil	VRKKYQRKERKSNHKFEVVGGRELLVRVPLPLAEVWAEM
Ga0210394_114695022	3300021420	Soil	VRKNYQRKERKSNRKFEVVRGQELLVRVPLPMAEVWAEMQAQVEE
Ga0210384_100122299	3300021432	Soil	VRKKYQRKDRKSNHEFEVVGGQELMVRVPLPIAEV
Ga0210384_119053761	3300021432	Soil	VKKNYQRKERKSNHKFEVRRALESRVRVPLPMAAVWVEMQAQKN
Ga0210410_100180247	3300021479	Soil	VRKNYQRKERKSNRKFEVVRGQELLVRVPLPMAEVWAEMQAQVVIDVEGNCNC
Ga0210409_101773921	3300021559	Soil	VRKNYQRKERKSNHKFEVVGGEELMVRVPLPMAEVWAEMQAQVEELTE
Ga0126371_104580653	3300021560	Tropical Forest Soil	VRKNYQRKARKSNHKFEVVGGQELLVRVPLPMAEVWAEMQAHVEELAGQAGL
Ga0242668_11111981	3300022529	Soil	VRNKYQRKQRKSNPKFQIVCGQELMVQVPLPIAEVWSELQA
Ga0212123_100919271	3300022557	Iron-Sulfur Acid Spring	VRKERKSNHKFEVVGGQELMVRVPLPLAEVWAEMQAQ
Ga0228598_11147532	3300024227	Rhizosphere	CESLLKERAAVRNKYQRKQRKSNHKFEIVRGQELLVRVPLPIAEVWAEMQTQVEELTG
Ga0247677_10383902	3300024245	Soil	VRKKYQRQVRKSNHKLEIVRGQELLVRVPLPMAEV
Ga0207684_101691752	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VKRNYWRKAHKSNHKFEAVGEQELLVRVPLPMAEVRAVN
Ga0207706_103598382	3300025933	Corn Rhizosphere	VRNKYQRKEHKSNHKFEVVGGQELLVRVPLPMAEVWRRCKRR
Ga0209239_10537203	3300026310	Grasslands Soil	VRNKYQRKDRKSNHKFEIVRGQELLVPLPMAEVWAEMQAQVEEL
Ga0209155_12008332	3300026316	Soil	VKKNYQRKERKSNHKFEVVRGQELLVRVPLPMAEV
Ga0179587_101318293	3300026557	Vadose Zone Soil	VRNKYQRKDRKSNHKFEVVGGPELLVRVPLPIAEVWAEMQAQ
Ga0207948_10077562	3300027174	Forest Soil	VRNKYQRKERKSNHKFEVVGGQELLVRVPLPIAEVWAEMQAQVEQLTGQ
Ga0209220_11788101	3300027587	Forest Soil	VRKKYQRKERKSNRKFEVVGGQELLVRVPLPIAEVWAEM
Ga0209446_11008541	3300027698	Bog Forest Soil	VRNNYQTKEQKSNHKFDVLGGQELMVQVPLPIAEVWAEMQ
Ga0209274_103284701	3300027853	Soil	VRKKYQRKDRKSNHKFEVVGGQELLVRVPLPIAEVW
Ga0209380_100889781	3300027889	Soil	VRNKYQRKERKSNHKFEVVGGPELMVRVPLPLAEVWAEMQAQVEELTGHAGL
Ga0209380_103024082	3300027889	Soil	VRNNYQRKEQKSNHKFDVLGGQELMVRVPLPIAEVWAEMQ
Ga0209526_107540191	3300028047	Forest Soil	VRNKYQTKDRKSNHKFEVVGGQELMVRVPLPLAEVWAEMQAQVEEL
Ga0308309_113857111	3300028906	Soil	VRNKYQRKEHKSNHKFEVVGGQELLVRVPLPLAEVWAEMQAQVEELTGHA
Ga0075392_111847382	3300030843	Soil	VKKNYQRKERKSNHKFEVVGGQELLVRVPLPIAEVWAEMQAQVEELT
Ga0170834_1120895341	3300031057	Forest Soil	VRNKYQRKERKSNHKFEVVRGQELLVRVPLPMAEVWAEMQAQVEELT
Ga0170823_148852181	3300031128	Forest Soil	VRKKYQRKERKSNDKFEVVGGRELLVRVPLPLAEVWAEMQAQ
Ga0170823_157824321	3300031128	Forest Soil	VSKKYQRKERKSNDKFEVVGGRELLVRVPLPLAEVWAEMQAQ
Ga0170824_1270207102	3300031231	Forest Soil	VRNKYQRKQRKSNQKFQIVRGQELMVQVPLPIAEVWRELQAQVEEL
Ga0170820_149675802	3300031446	Forest Soil	VRHKYQRQERKSNHKLEIVRGQELLVRVPLPMAEVWAEMQ
Ga0310915_104052712	3300031573	Soil	VKKNYQSKAHKSNHKFEVVGGQELLVRLPLPMAEVWAEMQA
Ga0310915_106068881	3300031573	Soil	VRKNYQRKARKSNHKFEVVGGQELLVRVPLPMAEV
Ga0318542_104428832	3300031668	Soil	VRKNYQRKERKSNHKFEVVRGQELLVRVPLPMAEVW
Ga0310686_1084134212	3300031708	Soil	VRNKYQRKQRKSNHKFEIVRGQELLVRVPLPIAEVWAEMQTQVEELTG
Ga0310686_1175387131	3300031708	Soil	VRKKYQRKERKSNWKFEIVRGQELMVQVPLPIAEVWSELQTQVEELT
Ga0307469_106491892	3300031720	Hardwood Forest Soil	VRNKYQRQERKSNHKFEIVRGQEMLVRVPLPIAEVWAEMQ
Ga0307469_107317921	3300031720	Hardwood Forest Soil	VEKNYQRKEHKSNHKFEVAREQELMVRVPLPMAEVWAE
Ga0307469_113272401	3300031720	Hardwood Forest Soil	VRKNYQRKERKSNHKFEVVRGQGLLVRVPLPMAEVWAESGY
Ga0307468_1010585382	3300031740	Hardwood Forest Soil	RNNYQREVRKSNHKLEVVRGQELLVRVPLPMAEVWAEMQAQVEALAG
Ga0307477_108265811	3300031753	Hardwood Forest Soil	VRNKYQRKERKSIHKLEEVQGQQLLVRVPLPMAEV
Ga0318554_104901841	3300031765	Soil	VRKNYQRKDRKSNHKLEMVGRQELLVRVPLPMAEVWAEMQARVEEL
Ga0318521_103762171	3300031770	Soil	VRKNYQRKVRKSNHKFEVVGGQELLVRVPLPMAEVWAEMQA
Ga0318546_101972142	3300031771	Soil	VRKNYQRKDRKSTHKFEMVGRQELLVRVPLPMAEVW
Ga0318552_105631501	3300031782	Soil	VRKNYQTIDRKSNHKFDIVGGQELPMRVPLPMAEVCAEMHARVE
Ga0318576_106354262	3300031796	Soil	VRKNYQRKARKSNHKFEVVGGQELLVRVPLPMAEVWAEMQ
Ga0307478_114290212	3300031823	Hardwood Forest Soil	VRKKYQRKDRKSNHKFEVVGGQELMVQVPLPIAEVWAEMQAQVEKLT
Ga0310917_101006254	3300031833	Soil	VRKNYQRKDRKSNHKFEVVGEQELLVRVPLPIAEVWAEMQAQVQELT
Ga0307479_100093521	3300031962	Hardwood Forest Soil	VRNKYQRKERKSNHKFEVVEGQELLVQVPLPMAEVWAEMQ
Ga0307479_101358013	3300031962	Hardwood Forest Soil	VRKKYQRKERKSNHKFEVVGGQELMMRIPLPLAEVWAEMQG
Ga0306922_118937252	3300032001	Soil	VRKNYQSKKHKSNHKFEVVGGQELQVRVPLPMAEVWAEMQAK
Ga0318518_106308931	3300032090	Soil	VRKNYQTIDRKSNHKFDIVGGQELPMRVPLPMAEVCAEMHARV
Ga0307470_107355362	3300032174	Hardwood Forest Soil	VRNKYQRKDRKSNHKFEVVGGQELLVRVPLPMAEVWAEM
Ga0335082_104164131	3300032782	Soil	VRKNYQKKERKSNHKFEVVGGQELLVRVPLPIAEVWAEMQAQ
Ga0335073_105417031	3300033134	Soil	VRKNYQRKARKSNRKFEVVGGQELQLRVPLPMAEVWAEMQTKVEELAG
Ga0318519_100210221	3300033290	Soil	VRKNYQRRDRKSNHKFEMVGRQELLVRVPLPMAEVWAERCKLGSR
Ga0314861_0177203_918_1022	3300033977	Peatland	MRSRYQKKDRKSNHEFEVVGGQELFVRVPLPMAEV