Metagenome / Metatranscriptome Family F068062

Overview

Basic Information

• Family ID: F068062
• Family Type: Metagenome / Metatranscriptome
• Number of Sequences: 125
• Average Sequence Length: 43 residues
• Representative Sequence: PRFALRGLKKSAAATRQRDKDEGADEIQTNSARHPRTFNEFI
• Number of Associated Samples: 111
• Number of Associated Scaffolds: 125

Quality Assessment

• Transcriptomic Evidence: Yes
• Most common taxonomic group: Bacteria
• % of genes with valid RBS motifs: 0.00 %
• % of genes near scaffold ends (potentially truncated): 96.80 %
• % of genes from short scaffolds (< 2000 bps): 90.40 %
• Associated GOLD sequencing projects: 106
• AlphaFold2 3D model prediction: Yes
• 3D model pTM-score: 0.18

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Most Common Taxonomy

• Group: Bacteria (95.200 % of family members)
• NCBI Taxonomy ID: 2
• Taxonomy: All Organisms → cellular organisms → Bacteria

Most Common Ecosystem

• GOLD Ecosystem: Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (26.400 % of family members)
• Environment Ontology (ENVO): Unclassified (46.400 % of family members)
• Earth Microbiome Project Ontology (EMPO): Host-associated → Plant → Plant rhizosphere (50.400 % of family members)

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure

• Classification: Globular
• Signal Peptide: No
• Secondary Structure distribution:
  α-helix: 0.00%
  β-sheet: 0.00%
  Coil/Unstructured: 100.00%

Predicted 3D Structure

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF09917	DUF2147	21.60
PF03797	Autotransporter	8.00
PF04773	FecR	3.20
PF13432	TPR_16	3.20
PF02666	PS_Dcarbxylase	1.60
PF01925	TauE	0.80
PF13505	OMP_b-brl	0.80
PF00005	ABC_tran	0.80
PF13936	HTH_38	0.80
PF06240	COXG	0.80

Neighboring Clusters of Orthologous Genes (COGs)

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG0688	Phosphatidylserine decarboxylase	Lipid transport and metabolism [I]	1.60
COG0730	Sulfite exporter TauE/SafE/YfcA and related permeases, UPF0721 family	Inorganic ion transport and metabolism [P]	0.80
COG1376	Lipoprotein-anchoring transpeptidase ErfK/SrfK	Cell wall/membrane/envelope biogenesis [M]	0.80
COG3034	Murein L,D-transpeptidase YafK	Cell wall/membrane/envelope biogenesis [M]	0.80
COG3427	Carbon monoxide dehydrogenase subunit CoxG	Energy production and conversion [C]	0.80

Phylogeny

NCBI Taxonomy

Level 1

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	95.20 %
Unclassified	root	N/A	4.80 %

Level 2

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	95.20 %
Unclassified	root	N/A	4.80 %

Level 3

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	95.20 %
Unclassified	root	N/A	4.80 %

Level 4

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	94.40 %
Unclassified	root	N/A	4.80 %

Level 5

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	60.00 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.80 %
Unclassified	root	N/A	4.80 %

Level 6

Name	Rank	Taxonomy	Distribution
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	46.40 %
Nitrosomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales	0.80 %
Unclassified	root	N/A	4.80 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.80 %

Level 7

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.80 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	42.40 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.80 %
Nitrosomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae	0.80 %
Unclassified	root	N/A	4.80 %

Level 8

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.80 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	29.60 %
Nitrosospira	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira	0.80 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.80 %
Unclassified	root	N/A	4.80 %

Level 9

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.80 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	8.80 %
Nitrosospira multiformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → Nitrosospira multiformis	0.80 %
Rhodoplanes roseus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes roseus	0.80 %
Unclassified	root	N/A	4.80 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	2.40 %

Level 10

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	0.80 %
Bradyrhizobium erythrophlei	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium erythrophlei	8.80 %
Bradyrhizobium sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp.	0.80 %
Bradyrhizobium sp. Tv2a-2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Tv2a-2	1.60 %
Nitrosospira multiformis	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Nitrosomonadales → Nitrosomonadaceae → Nitrosospira → Nitrosospira multiformis	0.80 %
Rhodoplanes roseus	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes roseus	0.80 %
Unclassified	root	N/A	4.80 %

Associated Scaffolds

Scaffold	Taxonomy	Length
3300000550|F24TB_13322382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1026
3300000956|JGI10216J12902_114900739	All Organisms → cellular organisms → Bacteria → Proteobacteria	713
3300001085|JGI12187J13240_101033	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	542
3300001418|JGI20188J14859_1004073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1993
3300001545|JGI12630J15595_10112508	All Organisms → cellular organisms → Bacteria → Proteobacteria	537
3300001593|JGI12635J15846_10346112	All Organisms → cellular organisms → Bacteria → Proteobacteria	913
3300002568|C688J35102_120820326	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → Rhodoplanes roseus	1687
3300003369|JGI24140J50213_10128925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	820
3300005339|Ga0070660_100563995	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	950
3300005339|Ga0070660_100783517	All Organisms → cellular organisms → Bacteria → Proteobacteria	801

Environmental Properties

Associated Habitat Types

Ecosystem

Habitat	Taxonomy	Distribution
Environmental	Environmental	77.60%
Host-Associated	Host-Associated	22.40%

Class

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	3.20%
Fungi	Host-Associated → Fungi	0.80%
Plants	Host-Associated → Plants	21.60%
Terrestrial	Environmental → Terrestrial	74.40%

Category

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	2.40%
Mycelium	Host-Associated → Fungi → Mycelium	0.80%
Peat	Environmental → Terrestrial → Peat	3.20%
Peat Moss	Host-Associated → Plants → Peat Moss	0.80%
Rhizoplane	Host-Associated → Plants → Rhizoplane	4.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.20%
Roots	Host-Associated → Plants → Roots	1.60%
Sediment	Environmental → Aquatic → Sediment	0.80%
Soil	Environmental → Terrestrial → Soil	71.20%

Type

Habitat	Taxonomy	Distribution
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.80%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	2.40%
Lake	Environmental → Aquatic → Freshwater → Lake	0.80%
Lentic	Environmental → Aquatic → Freshwater → Lentic	0.80%
Loam	Environmental → Terrestrial → Soil → Loam	10.40%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.80%
Soil	Host-Associated → Plants → Rhizosphere → Soil	7.20%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.80%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.60%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.00%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	3.20%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.80%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified	0.80%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified	0.80%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.20%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	0.80%

Subtype

Habitat	Taxonomy	Distribution
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.20%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	0.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	7.20%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.60%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.60%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.60%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	4.80%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.80%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.80%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.80%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	43.20%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	7.20%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	3.20%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.40%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	2.40%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.80%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.80%
Unclassified	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified	0.80%
Unclassified	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified	0.80%

Habitat

Habitat	Taxonomy	Distribution
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.80%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	4.80%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.80%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.80%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	0.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.40%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.60%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.20%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.80%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.80%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.80%
Fungus Garden	Host-Associated → Fungi → Mycelium → Unclassified → Unclassified → Fungus Garden	0.80%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.80%
Host-Associated	Host-Associated → Plants → Peat Moss → Unclassified → Unclassified → Host-Associated	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.80%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.60%
Permafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil	0.80%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.80%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.80%
Root Nodules	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Root Nodules	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.40%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.60%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.60%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.60%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.80%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.00%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.80%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.20%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.80%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.80%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	26.40%

Associated Samples

Taxon OID	Sample Name	Habitat Type
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental
3300001085	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM1_O1	Environmental
3300001418	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 shallow-072012	Environmental
3300001545	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1	Environmental
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental
3300003369	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 002-22A	Environmental
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F24TB_133223821	3300000550	Soil	RLAPPWLALCLEESTATACQRNKDKGADEIQTNSTRHPRKFGEFI*
JGI10216J12902_1149007393	3300000956	Soil	KKSATAARQRDKDDGADEIRANSARHARKFDEFI*
JGI12187J13240_1010333	3300001085	Forest Soil	GLKEAAAATCQRNKDERADEIKPNSARHPRRLVEFI*
JGI20188J14859_10040734	3300001418	Arctic Peat Soil	GLKKSAAATRQRDKDQGADEIPTNSARHPRNFKEFT*
JGI12630J15595_101125081	3300001545	Forest Soil	KKSAAAARQRDKDEGADEIEANSARHPRRFDEFI*
JGI12635J15846_103461121	3300001593	Forest Soil	GLKKSATAARQRNKDEGADEIQTNSARHARNFNEFI*
C688J35102_1208203261	3300002568	Soil	ALLGLKESAAASRQRDKDEGADEIQTNSARHPRRFREFI*
JGI24140J50213_101289251	3300003369	Arctic Peat Soil	LQACQFGLGPPRFALSGLKKSASATRQRDKDEGADQNQTNSARHPRTFNQFI*
Ga0070660_1005639954	3300005339	Corn Rhizosphere	GPPRFALRGLKKSATATRQRDKDEGADEIQTNSARHPRTFNEFI*
Ga0070660_1007835172	3300005339	Corn Rhizosphere	GPPRFALRGLKKSATATRQRDKDEGADEIQTNSARHPRTFDEFI*
Ga0070671_1020385731	3300005355	Switchgrass Rhizosphere	FQACDLGLGPPRFALRGLKKAAAATCQRNKDKGADQDQTNSVRHPRTLVEFI*
Ga0070674_1001448084	3300005356	Miscanthus Rhizosphere	GPPRFALGLEKATAATRQRDKDDGADEIKTNSMHHGRRFDEFI*
Ga0070678_1004705281	3300005456	Miscanthus Rhizosphere	GFGLGPPRFALGLEKATAATRQRDKDDGADEIKTNSMHHGRRFGEFI*
Ga0070699_1009033732	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	LGTPGFTLGELKKSATAARQRDKDDGADKVQTNSARHPRKFDEFI*
Ga0068853_1008502581	3300005539	Corn Rhizosphere	FGLGPPRFALGLEKATAATRQRDKDDGADEIKTNSMHHGRRFGEFI*
Ga0070733_104662601	3300005541	Surface Soil	GPPWPAFLGLKKSAAATRQRDKDQGADEIPANSARHPRNFKEFT*
Ga0070665_1013394253	3300005548	Switchgrass Rhizosphere	GPPRFALGGLKSAAATRQGDKDEGADEIQTNSARHRRTFGEFI*
Ga0066708_104046371	3300005576	Soil	KEPAAAACQRDKDEGADEVQTNSTRHPRNFGEFI*
Ga0070716_1003503181	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	RFALGGLKKSAAAARQRNKDEGADEIQTNSARHGGTFDEFI*
Ga0070716_1015144091	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	LRGLKKSTAAARQRDKDEGADEIQTNSARHPRRFDEFI*
Ga0070712_1002446403	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	AGLQARDFSLGPPRLTLFEKEATATRQRDKDEGADEIPTNSVRHAQNFNEFI*
Ga0075369_103108411	3300006186	Populus Endosphere	GLEKAASATRKRNKDDGADEIQTNSARHARTLGEFT*
Ga0075436_1002330213	3300006914	Populus Rhizosphere	LGLEETTTAACQRSKDEGADEIQANSARHLHTFGDFI*
Ga0099826_105483571	3300006948	Root Nodules	GPPRFTFGLEKAASATRKRNKDDGADEIQTNSARHARTFDEFT*
Ga0075524_105283231	3300006950	Arctic Peat Soil	LKKSAAAARQRDKDEGADEIQTNSARHPRTFNEFI*
Ga0099793_102718043	3300007258	Vadose Zone Soil	LGPPRFALLGLKKSATATRQRDKDEAADQIQTNSARHPRTFDEFI*
Ga0099794_102229661	3300007265	Vadose Zone Soil	AGLQACDFGLGPPRFTLRGLKKSAAATRQRDKDEGADEVQANSGRHPRTFDQFI*
Ga0099794_102844941	3300007265	Vadose Zone Soil	AGDFGLGPPRFALRGLKKSATATRQRNKDEGADEIQTNSARHPRTFNEFI*
Ga0099828_112740643	3300009089	Vadose Zone Soil	DFGLGPPRFALRGLKESAAAARERDKDEGADEVQTNSARHPRTFNEFI*
Ga0099827_106871653	3300009090	Vadose Zone Soil	GLGTPRFALGGLKKSATAARQRNKDKGADEIQTNSARHPRTFDEFI*
Ga0105243_128355742	3300009148	Miscanthus Rhizosphere	HRAGFETCDFCLGTPWLTFLGLKQTASATRKRYKDDGADEIQTNSARHSRKVVEMF*
Ga0105241_111025252	3300009174	Corn Rhizosphere	FGLEKAATATRERNEDDGADEIQTNSARHGRTFGEFT*
Ga0105241_112075032	3300009174	Corn Rhizosphere	GLQACQFGLGPPRFALRGLKKSAATTRKRNKDEGADEIQTNSTRHARKFDEFI*
Ga0105237_117747623	3300009545	Corn Rhizosphere	GPPRLTLGGLKQSAPTASQRNKDEGADEIQTNSTHHPGTFGEFI*
Ga0105249_107125881	3300009553	Switchgrass Rhizosphere	PWFPLGLEKSTAAACQRNKDKGADEIQTNSTRHPRKFGEFI*
Ga0105857_11345343	3300009650	Permafrost Soil	PWFTLLGLKKSAAAARQRNKDEGADEIQANSARHPRNFNEFI*
Ga0116227_108928321	3300009709	Host-Associated	GFQACDFCLGPPRLALLGLKQSATATRQRDKDKGADEIQTNSARHPRNIGQYI*
Ga0126380_118819442	3300010043	Tropical Forest Soil	LEESATATRQRDKDDGADDIQTNSTRHPRTFGELP*
Ga0126384_116110651	3300010046	Tropical Forest Soil	LRGLKESAAATCKRDEDERADKIQTNSARHRATFDDFI*
Ga0126376_131919591	3300010359	Tropical Forest Soil	AFGLEKPTATTCQRNKDKGADEIQTNSTRHARKFNEFI*
Ga0126378_133325023	3300010361	Tropical Forest Soil	GELKKSAAATRQRDKDDGADEVQTNSTRHPHTFDELP*
Ga0134126_110552821	3300010396	Terrestrial Soil	LGSPRCALLGLKKPATATRKRNEDQGADEIQTNSARHPRNFNEFI*
Ga0126345_12222901	3300010858	Boreal Forest Soil	LRGLKQTATTTRQRNKDEGADEIQTNSARHPRMFNEYI*
Ga0137391_111393901	3300011270	Vadose Zone Soil	RRLEKSAAAARQRDKDEGADQIQTNSARHPRRFDQFI*
Ga0137463_10637803	3300011444	Soil	DLGLGPPWFALGGLKKSAAAARQRNEDEGADEIQTNSARHGGTFDEFI*
Ga0137389_106557503	3300012096	Vadose Zone Soil	GDFGLGPPRFALRGLKKSTAAARQRDKDEGADEIQTNSARHSRTFDEFI*
Ga0137389_108418161	3300012096	Vadose Zone Soil	GDFGLGPPRFALRGLKKSTAAARQRDKDEGADEIQTNSARHPRTFDEFI*
Ga0137388_101845691	3300012189	Vadose Zone Soil	PRFALRGLKKSATATRQRDKDERADEIQTNSARHPRRIDEFL*
Ga0137388_102352261	3300012189	Vadose Zone Soil	PRFALRGLKKSTAAARQRDKDEGADEIQTNSARHSRTFDEFI*
Ga0137388_111178954	3300012189	Vadose Zone Soil	FALRGLKKSTAAARQRDKDEGADEIQTNSARHPRTFDEFI*
Ga0137364_111009992	3300012198	Vadose Zone Soil	GLGPPRFALRGLKKSTAAARQRDKDEGADEIQTNSARHPRTFDEFI*
Ga0137399_109504092	3300012203	Vadose Zone Soil	DFGLGPPRFALRGLKKSAAATRQRDKDEGADEIQTNSARHPRTFNEFI*
Ga0137362_104316473	3300012205	Vadose Zone Soil	GLGPPRFALRGLKKSTAAARQRDKDEGADEIQTNSARHPRRFDEFI*
Ga0137372_104177071	3300012350	Vadose Zone Soil	CEFGLSPPRFALGGLKKSAAATRQRDKDEGADQIQTNSTRHGGTFDEFI*
Ga0137386_109705711	3300012351	Vadose Zone Soil	GFALGGLKETATAARQRDKDDGADEIQTNSARHPRRFGDFT*
Ga0137385_107509424	3300012359	Vadose Zone Soil	GPPRFALRGLKKSTAAARQRDKDEGADEIQTNSARHPRRFDEFI*
Ga0137390_105912253	3300012363	Vadose Zone Soil	PRFALRGLKKSAAATRQRDKDEGADEIQTNSARHPRTFNEFI*
Ga0137390_106879671	3300012363	Vadose Zone Soil	PPRFALRGLKKSTAAARQRDKDEGADEIQTNSARHPRTFDEFI*
Ga0137358_101156061	3300012582	Vadose Zone Soil	PPRFALLGLKKSAPTTRQRDKDEGADEIQANSARHPRNFNEFI*
Ga0137358_104928353	3300012582	Vadose Zone Soil	AFLDRAGFQTCHLGLGPPRLALGGLKKSAAAARQRNKDEGADEIQTNSARHRGTFDEFI*
Ga0137398_109680273	3300012683	Vadose Zone Soil	ACDFGLGPPRFTLRGLKKSAAATRQRDKDEGADEVQANSARHPRTFVQFI*
Ga0157284_100709332	3300012893	Soil	GPPWFALGGLKKSASAARQRNKDEGADEIQTNSARHARNFNEFI*
Ga0157283_101850872	3300012907	Soil	DRSGLQACNLGLGPPRFTLGGLKQSAAATRQGDKDEGADEIQTNSARHARNFNEFI*
Ga0137396_104900783	3300012918	Vadose Zone Soil	LGPPRFALRGLKKSAAATRQRNKDEGADEIQTNSARHPRTFNEFI*
Ga0137359_108431382	3300012923	Vadose Zone Soil	VLLDGAGLQAGDFGLGPPRFALRGLKKSATATRQRDKDEAADQIQTNSARHPRRFDEFI*
Ga0137359_115407703	3300012923	Vadose Zone Soil	GLQARDFGLGPPRFTLRGLKKSAAATRQRDKDEGAEEAQANSARHPRRFDQFI*
Ga0137413_115222281	3300012924	Vadose Zone Soil	LRGLKKSATATHQRDKDQGADQIQTNSARHPRTFNEFI*
Ga0137416_122414412	3300012927	Vadose Zone Soil	FLDRTRLQACDLGLGPPRFALGGQKSATATRQGAKDEGADEIQTNSTRHRRRFGEFI*
Ga0137404_100194591	3300012929	Vadose Zone Soil	LGPPRLTFFGKKSATAACKRDKDEGADEIQTNSARHPRNFNEFI*
Ga0137407_116193762	3300012930	Vadose Zone Soil	LLGLKKAAAATCQRDKDEAADQIQANAARHPRNFNEFI*
Ga0164298_110173181	3300012955	Soil	LRGLKKSTAAARQRDKDEGADEIQTNSARHSRTFDEFI*
Ga0164301_113334313	3300012960	Soil	CHLVHGPPGFAHGALKKSAAAARQRNKDEGAYEIQTNSARHGGTFDEFI*
Ga0164302_106402533	3300012961	Soil	GLGPPRFALGLEKAAAATRQRDKDDGADEIQTNSTRHGRRFGEFT*
Ga0164302_108211253	3300012961	Soil	SGFQTGDLGLGPPRLALGGLEKSAAAACQRNKDEGADEIQTNSARHPRRFGEFI*
Ga0164308_103242752	3300012985	Soil	RGLKKSTAAARQRDKDEGADEIQTNSARHPRTFDEFI*
Ga0164306_106815061	3300012988	Soil	GLQASEFGLGPPRFALGGHKTAPATRQRSKDDGADQIQTNSARHPRNFDQFI*
Ga0157362_12541491	3300012998	Fungus Garden	LEKTTAATCQRNKDKGADEIQTNSTRHPRKFGEFI*
Ga0157374_120849583	3300013296	Miscanthus Rhizosphere	ALRGLKKAAATTCQRNKDKGADQDQTNSVRHPRTLVEFI*
Ga0163163_115697451	3300014325	Switchgrass Rhizosphere	LGLGPPWFALGGLKKSAAAARQRNKDEGADEIQTNSARHGGTFDEFI*
Ga0157380_123431693	3300014326	Switchgrass Rhizosphere	FALRELKKSAAAARQRDKDEGADEIQTNSARHPRTFNEFI*
Ga0181522_102765491	3300014657	Bog	PRLALFGKKTATATRERYKDEGADEIQTNSARHAENFNEFI*
Ga0167638_10343831	3300015197	Glacier Forefield Soil	PPRFALGRLKKSATATRQRDKDEGADQIETNSARHPRTFDQFI*
Ga0173480_102396931	3300015200	Soil	PPWFALGGLKKPAAAARQRNKDEGADEIQTNSARHGGTFDEFI*
Ga0137412_105693773	3300015242	Vadose Zone Soil	DRAGFQARDLGLGPPRFPLRGLKKSATATHQRDKDQGADQIQTNSARHPRTFNEFI*
Ga0132256_1012636431	3300015372	Arabidopsis Rhizosphere	CDLGLGSPRLPLGLEKSTAATRQRDKDEGADEIQTNSARHGGTFDEFI*
Ga0132255_1002953414	3300015374	Arabidopsis Rhizosphere	LALGLEESTATACQRNKDKGADEIQTNSARHPRKFGEFI*
Ga0187782_102782703	3300017975	Tropical Peatland	LGLEPSTTAACQRNKDDGADEIQTNSARHARTFDQFI
Ga0137408_12617491	3300019789	Vadose Zone Soil	ISAACDFSLGPPRLTFFGKKSATAACKRDKDEGADEIQTNSARHPRNFNEFI
Ga0193725_11108232	3300019883	Soil	HRAGLQARDFGLGPPWFALRGEKSAAAARQRDEDEGADEIQTNSARHPRRFDEFI
Ga0210403_101236824	3300020580	Soil	GLKKSATATHQRDKDEGADEIQTNSARHPRNLNQFI
Ga0210405_101422604	3300021171	Soil	LGPPWFALRGLKKSAAAASQRDKDEGADEIQTNSARHPCRFDEFI
Ga0210396_104414512	3300021180	Soil	FFGKKSATAACKRDKDEGADEIQTNSARHPRNFNEFI
Ga0210397_111566263	3300021403	Soil	GEKSAAATCQRNKDEAADQIPANAPRHPRRFNDFI
Ga0210389_100739575	3300021404	Soil	LTLLGKKSAAATRQRYKDEGADEIPTNSARHAENFNEFI
Ga0207929_10555523	3300025505	Arctic Peat Soil	GGLKKSAAAARQRDKDEGADEIQTNSARHPRRFDEFI
Ga0208080_10134163	3300025553	Arctic Peat Soil	RFPLRGLKESAAAARQRDKDEGADQIQTNSARHPRTFDEFI
Ga0208080_10267614	3300025553	Arctic Peat Soil	ALRGLKKSAAATRQRDKDEGADEIETNSARHPRTFNEFI
Ga0207647_101625243	3300025904	Corn Rhizosphere	GPPRFALGSLKQTATATSKRHKDKGADEIQTNSTRHGAEVLRI
Ga0207681_116229762	3300025923	Switchgrass Rhizosphere	GLEKAASATRKRNKDDGADEIQTNSARHARTFGEFT
Ga0207644_106195751	3300025931	Switchgrass Rhizosphere	PPRFALGGLKSAAATRQGDKDEGADEIQTNSARHRRTFGEFI
Ga0207712_119053261	3300025961	Switchgrass Rhizosphere	PWFPLGLEKSTAAACQRNKDKGADEIQTNSTRHPRKFGEFI
Ga0207675_1002099231	3300026118	Switchgrass Rhizosphere	LGGLKSAAATRQGDKDEGADEIQTNSARHRRTFGEFI
Ga0207855_10275121	3300027039	Tropical Forest Soil	GLEKSVAAACQRNKDEGADEIQTNSTRHPRTFDEFI
Ga0209011_11442371	3300027678	Forest Soil	PPRFPLRGLKKSAAATRQRDKDQGADQIQTNSARHPRTFNEFI
Ga0208989_100144565	3300027738	Forest Soil	RFAFLGLKKSTAASRQRDKDEGADEIQTNSARHPRTFGEFI
Ga0209074_105370561	3300027787	Agricultural Soil	ALGLEESTPAAGQRNKDKGADEIQTNSTRHPRKFGQFI
Ga0209048_101383044	3300027902	Freshwater Lake Sediment	PRLALRGLKKSAAAARQRDKDEEADEIQTNSARHPRRFDEFI
Ga0209488_107291711	3300027903	Vadose Zone Soil	GPPRFALRGRKKSAAATRQRDKDQGADEIQTNSARHPGNFNEFI
Ga0209488_108459021	3300027903	Vadose Zone Soil	PRFALRGLKKSTAAARQRDKDEGADEIQTNSAHHPRTFDEFI
Ga0268266_109934072	3300028379	Switchgrass Rhizosphere	GGLKSAAATRQGDKDEGADEIQTNSARHRRTFGEFI
Ga0308309_118312731	3300028906	Soil	GLKKSAAATRQRDKDDGADEIQTNSTRHPRTFGELP
Ga0302311_101322524	3300030739	Palsa	FALLGLKQSATATRQRDEDEGADEIQTNSARHPRNIGQFI
Ga0311366_116285593	3300030943	Fen	LKKAATATRQRDKDEGADEIQTNSARHSRRFGEFI
Ga0302180_100958401	3300031028	Palsa	LGPPRFALLGLKISAAAARQRNKDEGADEIQTNSARHPRNFNEFI
Ga0170824_1142345181	3300031231	Forest Soil	TARARRTEKKSAAATRKRDKDDRADEIQTNSARHRATFDDFI
Ga0307506_100793551	3300031366	Soil	GLEKPTAAACQRNKDKGADEIQTNSTRHPRKFGEFI
Ga0318572_101607243	3300031681	Soil	GLEKSVAAACQRNKDEGADEIQTNSTRHSRTFDEFI
Ga0310686_1097823243	3300031708	Soil	LALLGLKKSATAARQRDKDEGADEIQTNSARHARNFNEFI
Ga0310686_1173368523	3300031708	Soil	ALLGLKKSATAARQRDKDEGADEIQTNSARHTRNFNEFI
Ga0302319_100599811	3300031788	Bog	GLGPPRFALRGLKESASAARERYKDEGADEIQTNSARHRRRFGEFI
Ga0310910_114010681	3300031946	Soil	LKKSAAATGQRYEDDRADKIQTNSARHRATFDEFI
Ga0306926_121682812	3300031954	Soil	ARDFGLGPPWLALGLEESTPATCQRNKDDGADEVQTNSARHPRKFDQFI
Ga0335075_109434143	3300032896	Soil	GAPRLALGGLEKSAAATRQRDEDDGADEIQTNSTRHSRRFGELP
Ga0335076_101693441	3300032955	Soil	ELGLGPPRLALSLEKSMTATRQRNKDEGADEIPTNSARHPRTFDDFA
Ga0334983_0528344_499_654	3300034060	Freshwater	FQARRFGLGPPRFTFGLEKAASATRERNEDDGADEIQTNSARHARTFGEFT