Metagenome / Metatranscriptome Family F068061

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F068061
Family Type	Metagenome / Metatranscriptome
Number of Sequences	125
Average Sequence Length	91 residues
Representative Sequence	MQPPGYTCLADVEPLTIEIQRSTDGLWTMHLFDRRGSFKAIMPPSEYDLAAAKEKALISAEYYMRKYAADPSWTRPASVNWREFTPRSVVWET
Number of Associated Samples	107
Number of Associated Scaffolds	125

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	12.00 %
% of genes near scaffold ends (potentially truncated)	26.40 %
% of genes from short scaffolds (< 2000 bps)	82.40 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere (16.000 % of family members)
Environment Ontology (ENVO)	Unclassified (23.200 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (42.400 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 14.88% β-sheet: 23.97% Coil/Unstructured: 61.16%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
c.55.1.0: automated matches	d4h0pa1	4h0p	0.59426
d.347.1.1: Acetoacetate decarboxylase-like	d3cmba1	3cmb	0.57943
e.43.1.1: Capz alpha-1 subunit	d3aa0a_	3aa0	0.57383
c.55.3.0: automated matches	d4krea3	4kre	0.57196
b.29.1.0: automated matches	d6ut9a1	6ut9	0.56354

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 125 Family Scaffolds
PF05496	RuvB_N	12.00
PF14520	HHH_5	6.40
PF07228	SpoIIE	4.80
PF13186	SPASM	4.80
PF00383	dCMP_cyt_deam_1	4.00
PF07499	RuvA_C	3.20
PF03551	PadR	2.40
PF04452	Methyltrans_RNA	2.40
PF08211	dCMP_cyt_deam_2	2.40
PF00227	Proteasome	1.60
PF12867	DinB_2	1.60
PF05960	DUF885	1.60
PF02687	FtsX	1.60
PF16116	DUF4832	1.60
PF00005	ABC_tran	1.60
PF07927	HicA_toxin	0.80
PF00483	NTP_transferase	0.80
PF07730	HisKA_3	0.80
PF12850	Metallophos_2	0.80
PF12276	DUF3617	0.80
PF05198	IF3_N	0.80
PF01261	AP_endonuc_2	0.80
PF13414	TPR_11	0.80
PF14559	TPR_19	0.80
PF11154	DUF2934	0.80
PF13482	RNase_H_2	0.80
PF04138	GtrA	0.80
PF04055	Radical_SAM	0.80
PF00196	GerE	0.80
PF13561	adh_short_C2	0.80

COG ID	Name	Functional Category	% Frequency in 125 Family Scaffolds
COG2255	Holliday junction resolvasome RuvABC, ATP-dependent DNA helicase subunit RuvB	Replication, recombination and repair [L]	12.00
COG0632	Holliday junction resolvasome RuvABC DNA-binding subunit	Replication, recombination and repair [L]	3.20
COG0295	Cytidine deaminase	Nucleotide transport and metabolism [F]	2.40
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	2.40
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	2.40
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	2.40
COG1385	16S rRNA U1498 N3-methylase RsmE	Translation, ribosomal structure and biogenesis [J]	2.40
COG0638	20S proteasome, alpha and beta subunits	Posttranslational modification, protein turnover, chaperones [O]	1.60
COG3484	Predicted proteasome-type protease	Posttranslational modification, protein turnover, chaperones [O]	1.60
COG4805	Uncharacterized conserved protein, DUF885 family	Function unknown [S]	1.60
COG5405	ATP-dependent protease HslVU (ClpYQ), peptidase subunit	Posttranslational modification, protein turnover, chaperones [O]	1.60
COG1724	Predicted RNA binding protein YcfA, dsRBD-like fold, HicA-like mRNA interferase family	General function prediction only [R]	0.80
COG0290	Translation initiation factor IF-3	Translation, ribosomal structure and biogenesis [J]	0.80
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.80
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.80
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.80
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.80

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	89.60 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	68.00 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	16.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	68.00 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	12.00 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	4.00 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	68.00 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	11.20 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4.00 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	0.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	68.00 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	11.20 %
unclassified Acidobacteriaceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae	0.80 %
Bryobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter	0.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	68.00 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	10.40 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.80 %
Acidobacteriaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	0.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.80 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004091\|Ga0062387_101469776	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300004114\|Ga0062593_103366631	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	513	Open in IMG/M
3300005176\|Ga0066679_10463201	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	829	Open in IMG/M
3300005334\|Ga0068869_101753804	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	555	Open in IMG/M
3300005334\|Ga0068869_102050962	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	514	Open in IMG/M
3300005336\|Ga0070680_100865159	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	779	Open in IMG/M
3300005406\|Ga0070703_10341980	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	636	Open in IMG/M
3300005434\|Ga0070709_10546445	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	886	Open in IMG/M
3300005439\|Ga0070711_100119601	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1946	Open in IMG/M
3300005440\|Ga0070705_101670895	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	537	Open in IMG/M
3300005444\|Ga0070694_100665129	All Organisms → cellular organisms → Bacteria → Proteobacteria	844	Open in IMG/M
3300005445\|Ga0070708_100346756	All Organisms → cellular organisms → Bacteria	1399	Open in IMG/M
3300005445\|Ga0070708_100990288	All Organisms → cellular organisms → Bacteria	788	Open in IMG/M
3300005468\|Ga0070707_102091437	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	534	Open in IMG/M
3300005471\|Ga0070698_101743846	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	575	Open in IMG/M
3300005518\|Ga0070699_100042235	All Organisms → cellular organisms → Bacteria	3945	Open in IMG/M
3300005530\|Ga0070679_100698435	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	957	Open in IMG/M
3300005530\|Ga0070679_101495539	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	622	Open in IMG/M
3300005534\|Ga0070735_10065176	All Organisms → cellular organisms → Bacteria → Acidobacteria	2362	Open in IMG/M
3300005536\|Ga0070697_100168705	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → unclassified Acidobacteriaceae → Acidobacteriaceae bacterium	1851	Open in IMG/M
3300005536\|Ga0070697_100774419	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	848	Open in IMG/M
3300005537\|Ga0070730_10063593	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2622	Open in IMG/M
3300005537\|Ga0070730_10146809	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	1603	Open in IMG/M
3300005537\|Ga0070730_10643262	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	674	Open in IMG/M
3300005538\|Ga0070731_11098511	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	526	Open in IMG/M
3300005540\|Ga0066697_10130235	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1479	Open in IMG/M
3300005541\|Ga0070733_10008431	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6583	Open in IMG/M
3300005541\|Ga0070733_10247455	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1172	Open in IMG/M
3300005542\|Ga0070732_10036101	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2828	Open in IMG/M
3300005542\|Ga0070732_10181603	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1256	Open in IMG/M
3300005545\|Ga0070695_100034118	All Organisms → cellular organisms → Bacteria	3188	Open in IMG/M
3300005545\|Ga0070695_100092156	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2025	Open in IMG/M
3300005547\|Ga0070693_101628813	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	507	Open in IMG/M
3300006028\|Ga0070717_11690880	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	573	Open in IMG/M
3300006059\|Ga0075017_100535499	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	891	Open in IMG/M
3300006162\|Ga0075030_101203867	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300006173\|Ga0070716_100359268	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1034	Open in IMG/M
3300006797\|Ga0066659_10317671	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1195	Open in IMG/M
3300006800\|Ga0066660_11035064	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	657	Open in IMG/M
3300006806\|Ga0079220_11546532	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	572	Open in IMG/M
3300006854\|Ga0075425_100261856	All Organisms → cellular organisms → Bacteria	1990	Open in IMG/M
3300006871\|Ga0075434_102402004	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	529	Open in IMG/M
3300006893\|Ga0073928_10458497	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	921	Open in IMG/M
3300006893\|Ga0073928_10487026	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	887	Open in IMG/M
3300009038\|Ga0099829_10431850	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1090	Open in IMG/M
3300009038\|Ga0099829_10990290	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	697	Open in IMG/M
3300009088\|Ga0099830_11067181	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	669	Open in IMG/M
3300009089\|Ga0099828_11572833	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	579	Open in IMG/M
3300009098\|Ga0105245_12398981	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	581	Open in IMG/M
3300009137\|Ga0066709_101941528	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	818	Open in IMG/M
3300009148\|Ga0105243_11664334	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666	Open in IMG/M
3300009177\|Ga0105248_11223671	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	849	Open in IMG/M
3300010046\|Ga0126384_10162437	All Organisms → cellular organisms → Bacteria	1732	Open in IMG/M
3300010358\|Ga0126370_10229447	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1425	Open in IMG/M
3300010361\|Ga0126378_12348343	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	609	Open in IMG/M
3300010366\|Ga0126379_10355746	All Organisms → cellular organisms → Bacteria	1497	Open in IMG/M
3300010379\|Ga0136449_100128639	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5055	Open in IMG/M
3300010379\|Ga0136449_101063122	All Organisms → cellular organisms → Bacteria → Acidobacteria	1293	Open in IMG/M
3300010397\|Ga0134124_10957267	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	866	Open in IMG/M
3300010398\|Ga0126383_10456080	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1329	Open in IMG/M
3300010400\|Ga0134122_10150308	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1893	Open in IMG/M
3300010403\|Ga0134123_10907625	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	887	Open in IMG/M
3300011270\|Ga0137391_11174117	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	615	Open in IMG/M
3300011271\|Ga0137393_11347170	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	603	Open in IMG/M
3300012096\|Ga0137389_10261811	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1456	Open in IMG/M
3300012189\|Ga0137388_10155391	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2030	Open in IMG/M
3300012200\|Ga0137382_11012950	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	596	Open in IMG/M
3300012202\|Ga0137363_10322016	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1274	Open in IMG/M
3300012205\|Ga0137362_11435555	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	576	Open in IMG/M
3300012361\|Ga0137360_10820479	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	801	Open in IMG/M
3300012362\|Ga0137361_10286493	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1506	Open in IMG/M
3300012929\|Ga0137404_10805372	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	853	Open in IMG/M
3300013296\|Ga0157374_10300290	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1588	Open in IMG/M
3300013297\|Ga0157378_10912101	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	910	Open in IMG/M
3300013297\|Ga0157378_11970483	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	634	Open in IMG/M
3300014638\|Ga0181536_10016947	All Organisms → cellular organisms → Bacteria → Acidobacteria	6176	Open in IMG/M
3300015264\|Ga0137403_10014040	All Organisms → cellular organisms → Bacteria → Acidobacteria	8726	Open in IMG/M
3300016371\|Ga0182034_11667986	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300017959\|Ga0187779_10800148	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	643	Open in IMG/M
3300017966\|Ga0187776_10106766	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1675	Open in IMG/M
3300017966\|Ga0187776_10358441	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	964	Open in IMG/M
3300017973\|Ga0187780_11198874	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300018482\|Ga0066669_10404774	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1157	Open in IMG/M
3300020579\|Ga0210407_10059036	All Organisms → cellular organisms → Bacteria	2871	Open in IMG/M
3300021168\|Ga0210406_10418137	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1071	Open in IMG/M
3300021170\|Ga0210400_10093329	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2377	Open in IMG/M
3300021171\|Ga0210405_10053872	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	3181	Open in IMG/M
3300021420\|Ga0210394_11543544	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	560	Open in IMG/M
3300021432\|Ga0210384_10289018	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1476	Open in IMG/M
3300021478\|Ga0210402_10596651	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1024	Open in IMG/M
3300021559\|Ga0210409_10618874	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	952	Open in IMG/M
3300022557\|Ga0212123_10428330	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	879	Open in IMG/M
3300024249\|Ga0247676_1078854	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	545	Open in IMG/M
3300024251\|Ga0247679_1058127	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	648	Open in IMG/M
3300025885\|Ga0207653_10230592	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	705	Open in IMG/M
3300025906\|Ga0207699_10766329	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	708	Open in IMG/M
3300025911\|Ga0207654_10351231	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1015	Open in IMG/M
3300025912\|Ga0207707_10137803	All Organisms → cellular organisms → Bacteria → Acidobacteria	2134	Open in IMG/M
3300025916\|Ga0207663_11032791	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	660	Open in IMG/M
3300025917\|Ga0207660_11626388	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	520	Open in IMG/M
3300025935\|Ga0207709_11454853	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	568	Open in IMG/M
3300027783\|Ga0209448_10212624	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300027842\|Ga0209580_10045588	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2032	Open in IMG/M
3300027842\|Ga0209580_10061988	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1762	Open in IMG/M
3300027857\|Ga0209166_10046060	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2571	Open in IMG/M
3300027867\|Ga0209167_10030984	All Organisms → cellular organisms → Bacteria	2569	Open in IMG/M
3300027867\|Ga0209167_10297223	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	873	Open in IMG/M
3300027911\|Ga0209698_11080472	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	595	Open in IMG/M
3300027986\|Ga0209168_10206531	All Organisms → cellular organisms → Bacteria → Acidobacteria	981	Open in IMG/M
3300029636\|Ga0222749_10169587	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1074	Open in IMG/M
3300031715\|Ga0307476_10043822	All Organisms → cellular organisms → Bacteria	3028	Open in IMG/M
3300031716\|Ga0310813_10487470	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1075	Open in IMG/M
3300031720\|Ga0307469_10819586	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	855	Open in IMG/M
3300031754\|Ga0307475_10209074	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1561	Open in IMG/M
3300031754\|Ga0307475_10376892	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1140	Open in IMG/M
3300031962\|Ga0307479_10321894	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1529	Open in IMG/M
3300032160\|Ga0311301_10132481	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	4622	Open in IMG/M
3300032160\|Ga0311301_10891840	All Organisms → cellular organisms → Bacteria	1200	Open in IMG/M
3300032174\|Ga0307470_10433258	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	940	Open in IMG/M
3300032180\|Ga0307471_102059335	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	717	Open in IMG/M
3300032205\|Ga0307472_100517839	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	1033	Open in IMG/M
3300032892\|Ga0335081_10874464	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1063	Open in IMG/M
3300033158\|Ga0335077_10809240	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	953	Open in IMG/M
3300033402\|Ga0326728_10009244	All Organisms → cellular organisms → Bacteria	23849	Open in IMG/M
3300033412\|Ga0310810_10112875	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	3222	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	90.40%
Host-Associated	Host-Associated	9.60%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	83.20%
Plants	Host-Associated → Plants	9.60%
Aquatic	Environmental → Aquatic	7.20%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	82.40%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.00%
Freshwater	Environmental → Aquatic → Freshwater	2.40%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.40%
Sediment	Environmental → Aquatic → Sediment	2.40%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.60%
Peat	Environmental → Terrestrial → Peat	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	57.60%
Loam	Environmental → Terrestrial → Soil → Loam	20.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.00%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.80%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.40%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.40%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.40%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.60%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.20%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	20.00%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	4.80%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.80%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.40%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.40%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.40%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.60%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.80%

Habitat	Taxonomy	Distribution
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	16.00%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	12.00%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	12.00%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	8.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	6.40%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.00%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	4.00%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.20%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.20%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.20%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.40%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	2.40%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.40%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.40%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.40%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.60%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.60%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.60%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.60%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.80%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.80%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.80%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300005176	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005534	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1	Environmental	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005538	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005542	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006893	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPA 5.5 metaG	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014638	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_60_metaG	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300024249	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK17	Environmental	Open in IMG/M
3300024251	Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK20	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027783	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027867	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300029636	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032892	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033402	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB31MN	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062387_1014697761	3300004091	Bog Forest Soil	MQPPGYACLADVEPLTIEIHRSTDGLWTMHLFDRRSSFKAIMPPSEYDLAAAKEKALISAEYYMRKYAGDPSWTRPASVNWLEFAPRSVVWET*
Ga0062593_1033666311	3300004114	Soil	MQPRGYTCLGTVEPLTIEIQLAADGLWMMHLFDERGRFRVIMPPSEYGLDAAKEKALVNAEFYMRKYGGDGSWRQPASIVWQEFAPRSVVWET*
Ga0066679_104632012	3300005176	Soil	MLLAGYTCFAQIQPLVLLIQASTDGLWSMSLFDRGGGFRVVMPPSEFGLEAAKEKALISAEYYMRKYGGDRKWTRPASVDWEEFTPKSVIWET*
Ga0068869_1017538041	3300005334	Miscanthus Rhizosphere	MEPRGYSCLIEIEPLTIHIERSADGLWTMNLFDSRAGCKVIMPPSEYDLAAAKEKALINAAYYMRKYGGQASWTPPASLAWRDFSPKSIIWET*
Ga0068869_1020509621	3300005334	Miscanthus Rhizosphere	MEPRGYTCLIEMEPLTIQIERSADGLWTMNLFDRGAGCKVIMPPSEYDLAAAKEKALLSAAYYMRKYGGNASWTRPASLHWREFIPKSVIWET*
Ga0070680_1008651591	3300005336	Corn Rhizosphere	MEPRGYSCLIEIEPLTIHIERSADGLWAMNLFDSCAGCKVIMPPSEYDLAAAKEKALINAAYYMRKYGGQPSWTRPASLAWRDFSPKSVIWET*
Ga0070703_103419802	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MQPPGYACLAEVEPFIIEIQRSRDGLWTMSLYDRSGGFKVIMPPSEYDLAAAKEKALISVEHYMRKYGGNASWTRPARVEWREFAPRSVIWET*
Ga0070709_105464451	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	LAEVEPFIIEIQRSRDGLWTMSLYDRSGGFKVIMPPSEYDLAAAKEKALISVEHYMRKYGGNASWTRPARVEWREFAPRSVIWET*
Ga0070711_1001196011	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MLPPGYTCLAEVEPLTIEIQRSTDGLWTMHLLDRRGGFKVVMPPSEFGLPAAKEKALVSAEYYMRKYAGDRNWTRPDSVAWREFTPRSVIWET*
Ga0070705_1016708952	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	GYACLADVEPLTIEIQRSTDGLWTMHLFDRRGSFKAIMPPSEYDLAAAKEKALISAEYYMRKYASDRSWARPASVDWREFTPRSVVWET*
Ga0070694_1006651292	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MQPRGYTCLGTVEPLTIEIQLAADGLWMMHLFDERGRFRVIMPPSEYGLDAAKEKALVNAEFYMRKYGGDGSWRHPASIEWQEFAPRSVVWET*
Ga0070708_1003467562	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MLSPGYTCVAEVEPLTIEIHLSTDGLWAMHMLDRRGGFKVTLPPSEFGLTAAKEKALVNAEHYMRKYGGDRSWTQPASVDWHEFTPRNVIWET*
Ga0070708_1009902882	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MQPPGYACLADVEPLTIEIQRSTDGLWTMHLFDRRGSFKAIMPPSEYDLAAAKEKALISAEYYMRKYAGDPSWTRPTSINWREFTPRSVVWET*
Ga0070707_1020914372	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	IQRSRDGLWTMSLYDRSGGFKVIMPPSEYDLAAAKEKALISVEHYMRKYGGNASWTRPARVEWREFAPRSVIWET*
Ga0070698_1017438461	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	SRYTPRMQPPGYACLADVEPLTIEIQRSTDGLWTMHLFDRRGSFKAIMPPSEYDLAAAQEKALISAEYYMRKYAGDPSWTRPTSINWREFTPRSVVWET*
Ga0070699_1000422353	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MQPRGYTCLGTVEPLTIEIQLAADGLWMMHLFDERGRFRVIMPPSEYGLDAAKEKALVNAEFYMRKYGGDGSWRQPASIEWQEFAPRSVVWET*
Ga0070679_1006984352	3300005530	Corn Rhizosphere	MQPPGYACLAEVEPFIIEIQRSRDGLWTMNLYDRSGGFKVIMPPSEYDLAAAKEKALISAEHYVRKYGGNASWTRPARVEWREFAPRSVIWET*
Ga0070679_1014955391	3300005530	Corn Rhizosphere	AMEPRGYSCLIEIEPLTIHIERSADGLWAMNLFDSCAGCKVIMPPSEYDLAAAKEKALINAAYYMRKYGGQPSWTRPASLAWRDFSPKSVIWET*
Ga0070735_100651762	3300005534	Surface Soil	MHPPGYACVAEVDPFVIEIQRSADGLWAMNLYDRSGGFKVIMPPSEYDLAAAKEKALISAEHYMRKYGGNASWTRPARVEWREFVPRSVIWET*
Ga0070697_1001687053	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MQPPGYACLADVEPLTIEIQRSTDGLWTMHLFDRRGSFKAIMPPSEYDLAAAKEKALISAEYYMRKYASDRSWARPASVDWREFTPR
Ga0070697_1007744192	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	MQPPGYTCLAEVEPLTIEIHRSTDGLWTMHLFDRLGGFKVNLPPSEFGLAAAKEKALINAGYYMRKYGGDRSWTQPGSVDWREFTPRNVIWET*
Ga0070730_100635931	3300005537	Surface Soil	MLPPGYTCLAEVEPLIIEIQRSTDGLWTMHLLDRRGGFKVVMPPSEFGLPAAKEKALVSAEHYMRKYAGDRNWTRPDSVDWREFTPRSVIWET*
Ga0070730_101468093	3300005537	Surface Soil	MQPPGYACLAEVEPFIIEIQRSRDGLWTMNLYDRSGGFKVIMPPSEYDLAAAKEKALISAEHYMRKYGGNASWTRPARIEW
Ga0070730_106432621	3300005537	Surface Soil	MLPPGYTCLAEVEPLIIEIQRSTDGLWTMHLLDGRGGFKVILPPSEFDLDAAKEKALVSAEHYMRKYAADRNWTRPDSVDWREFTPRSVVWET*
Ga0070731_110985111	3300005538	Surface Soil	ELPPLTIEIQRTADGLWSMYLFDDRAHARVIMPPCEFDLSAAKEKALTNAEFYMRKFGGDASWIRPAAAAWSEFKPREIVWET*
Ga0066697_101302352	3300005540	Soil	MLPPGYTCLAEVEPLTIEIHRSTDGLWTMHLLDRLGGFKVTLPPSEFGLAAAKEKALVNAEHYMRKYGGDRSWTQPASVDWREFTPRNVIWET*
Ga0070733_100084314	3300005541	Surface Soil	MLLPGYTCLADVDPLSIEIQRSTDGTWTMHLFDRQGGFMVIMPPSEFGLDAAKEKALISARHYMRKYGGDRSWELPGRVDWREFEPRSVVWET*
Ga0070733_102474552	3300005541	Surface Soil	MADVEPLAIEIQRSTDGLWTMHLFDRRGSFKAIMPPSEYDLAAAKEKALISAEYYMRKYAADPSWTRPASVNWREFTPRSVVWET*
Ga0070732_100361014	3300005542	Surface Soil	MQPPGYTCLADVEPLTIEIQRSTDGLWTMHLFDRRSSFKAIMPPSEYDLAAAKEKALISAEYYMRKYAADPAWTRPASVLWREFTPRSVVWET*
Ga0070732_101816032	3300005542	Surface Soil	MQPRGYTCLAVLEPLTIEIQLNADGLWTMNLFDRRGGFRVIMPPSEFGLDAAKHKATINAEYYMRKYGGDQSWTPPESVEWHEFTPRNIIWET*
Ga0070695_1000341182	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	LGTVEPLTIEIQLAADGLWMMHLLDERGRFRVIMPPSEYGLDAAKEKALVNAEFYMRKYGGDGSWRHPASIEWQEFAPRSVVWET*
Ga0070695_1000921562	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MPMDPRSSHSELLHSAMLPPAYTCLAEVEPLTIEIHLSTDGLWAMHLFDRRGGFRVVLPPSEFGLPAAKEKALVNAEYYMRKYAGDRSWTYPASVDWREFKPRDVIWET*
Ga0070693_1016288132	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	MQPPGYACLAEVEPFIIEIQRSRDGLWTMNLYDRSGGFKVIMPPSEYDLAAAKEKALISVEHYMRKYGGNASWTRPARVEWREFAPRSVIWET*
Ga0070717_116908801	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	QIQPLVLLIQASTDGLWSMSLFDRGGGFRVVMPPSEFGLEAAKEKALISAEYYMRKYGGDRKWTRPASVDWEEFTPKSVIWET*
Ga0075017_1005354991	3300006059	Watersheds	MQPPGYTCLADVEPLTIEIQRSTDGLWTMHLFDRRGSFKAIMPPSEYDLAAAKEKALISAEYYMTKYAADPSWTRPASINWREFTPRSVVWET*
Ga0075030_1012038672	3300006162	Watersheds	TIEIQRSTDGLWTMHLFDRRGSFKAIMPPSEYDLAAAKEKALISAEYYMRKYAADPSWTRPASINWREFTPRSVVWET*
Ga0070716_1003592683	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MLPPGYTCLAEVEPLTIEIQRSTDGLWTMHLLDRRGGFKVVMPPSEFGLPAAKEKALVSAEYYMRKYAGDRNWTRPDSVDWREFSPRSAIWET*
Ga0066659_103176712	3300006797	Soil	MLAPGYTCLAEVEPLTIEIHRSTDGLWTMHLLDRLGGFKVTLPPSEFGLAAAKEKALVNAEHYMRKYGGDRSWTQPASVDWREFTPRNVIWET*
Ga0066660_110350642	3300006800	Soil	MEPRGYSCLIEIEPLTIHIERSADGLWTMNLFDSRTRSKVIMPPSEYDLAAAKEKALINAAYYMRKYGGDPSWTRPSSPAWREFTPKSIIWET*
Ga0079220_115465322	3300006806	Agricultural Soil	MQPPGYACLAEVEPFIIEIQRSRDGLWTMNLYDRSGGFKVIMPPSEYDLAAAKEKALISAEHYMRKYGGNASWTRPARVEWREFAPRSVIWET*
Ga0075425_1002618563	3300006854	Populus Rhizosphere	MQPSGYACLAEVEPFIIEIQRSRDGLWTMSLYDRSGGFKVIMPPSEYDLAAAKEKALISVEHYMRKYGGNASWTRPARVEWREFAPRSVIWET*
Ga0075434_1024020041	3300006871	Populus Rhizosphere	TEVEPLTIEIQLSADGLWTMNLLDRRGGFKVIMPPSEFGLIAAKEKAVINAQYYMQKFGGDKSWNRPSSVEWREFTPRSVIWET*
Ga0073928_104584972	3300006893	Iron-Sulfur Acid Spring	MTDGVPACYTPAMLPTGYTCLAEVDRLIIEIQRSADGLWAMWLFDARGGFKAIMPPSEFGLDAAKEKALINARYYMQKYGGDRSWTLPVKIDWREFTPKSVTWET*
Ga0073928_104870262	3300006893	Iron-Sulfur Acid Spring	MEPRGYSCLIEIEPLTIHIERSADGLWTMNLFDRRAGCKVIMPPSEYDLAAAKEKALINAAYYMRKYGGNASWTRPASLEWREFTPKSVIWET*
Ga0099829_104318502	3300009038	Vadose Zone Soil	VAEVEPLTIEIHLSTDGLWAMHMLDRRGGFKVTLPPSEFGLTAAKEKALVNAEHYMRKYGGDRSWTQPASVDWHEFTPRNVIWET*
Ga0099829_109902902	3300009038	Vadose Zone Soil	MQPSGYTCLADVEPLTIEIQRSTDGLWTMHLFDRRGSFKAIMPPSEYDLAAAKEKALISAEYYMRKYAGDPSWTRPTSINWREFAPRSVVWET*
Ga0099830_110671811	3300009088	Vadose Zone Soil	VAEVEPLTIEIHLSTDGLWAMHMLDRRGGFKVTLPPSEFGLTAAKEKALVNAEHYMRKYGGDRSWTQPASVDWHEFTPRDVIWET*
Ga0099828_115728331	3300009089	Vadose Zone Soil	MLSSGFTCLAEVEPLIIEIQRSADGLWTMNLFDRRGGFKVIMPPSEFSLDAAKEKALISAQYYMRKYGGDRSWTQPTSVEWREFNPRNV
Ga0105245_123989812	3300009098	Miscanthus Rhizosphere	MEPRGYSCLIEIEPLTIHIERSADGLWTMNLFDSRAGCKVIMPPSEYDLAAAKEKALINAAYYMRKYGGQASWTPPASPAWRDFSPKSIIWET*
Ga0066709_1019415282	3300009137	Grasslands Soil	MLPPGYTCLAEVEPLTIEIYRSTDGLWTMHLLDKVGGFKVIMPPSEFGLAAAKEKALVNAEHYMRKYGGDRSWTQPASVDWREFTPRNVIWET*
Ga0105243_116643341	3300009148	Miscanthus Rhizosphere	MEPLTIQIERSADGLWTMNLFDRGAGCKVIMPPSEYDLAAAKEKALLSAAYYMRKYGGNASWTRPASLHWREFIPKSVIWET*
Ga0105248_112236712	3300009177	Switchgrass Rhizosphere	MEPRGYSCLIEIEPLTIHIERSADGLWTMNLFDGGAGCKVIMPPSEYDLAAAKEKALINAAYYMRKYGGQASWTPPASPAWRDFSPKSIIWET*
Ga0126384_101624373	3300010046	Tropical Forest Soil	MLPAGYTCLAEIEPLTIEIYLSTEGLWAMHMLDRCGAFKVILPPGEFSLAAAKEKALVNAEYYMRKYGGDRSWTQPASVDWREFTPRNVMWET*
Ga0126370_102294473	3300010358	Tropical Forest Soil	MLPAGYTCLAEVEPLTIEISLSTEGLWAMHMLDRCGAFKVILPPGEFSLAAAKEKALVNAEYYMRKYGGDRSWTQPASVDWREFTPRSVIWET*
Ga0126378_123483432	3300010361	Tropical Forest Soil	TIEISLSTEGLWAMHMLDRCGAFKVILPPGEFSLAAAKEKALVNAEYYMRKYGGDRSWTQPASVDWREFTPRSVIWET*
Ga0126379_103557462	3300010366	Tropical Forest Soil	MLPAGYTCLAEIEPLTIEIYLSTEGLWAMHMLDRCGAFKVILPPGEFSLAAAKEKALVNAEYYMRKYGGDRSWTQPASVDWREFTPRSVIWET*
Ga0136449_1001286395	3300010379	Peatlands Soil	MQPPGYTCLTEVEPLTIEIQRSTDGLWTMHLFDRRSSFKAIMPPSEYDLAAAKEKALISAEYYMRKYAGDPSWTRPASVNWREFTPRSVVWET*
Ga0136449_1010631222	3300010379	Peatlands Soil	MSQARGYSCLAEIAPLIIEIERSSDGLWTMQLFDSRACARVIMPPSEFDLDAAKQKALTSAEFYMRKQGGDPSWTRPASVDWREFTPRDIIWET*
Ga0134124_109572672	3300010397	Terrestrial Soil	MLPVGYTCLAEADPFTILIQRSADGLWTMQLLDRRGSGRIVMPPSEFGLSEAKQKAIISARYYMRKYGGDASWTEPNVVAWQEFAPKSVIWET*
Ga0126383_104560802	3300010398	Tropical Forest Soil	MLPAGYTCLAEVEPLTIEIYLSTEGLWAMHMLDRCGAFKVILPPGEFSLAAAKEKALVNAEYYMRKYGGDRSWTQPASVDWREFTPRNVMWET*
Ga0134122_101503083	3300010400	Terrestrial Soil	LGTVEPLTIEIHLAADGLWMMHLLDKRGRFRVIMPPSEYGLDAAKEKALVNAEFYMRKYGGDGSWRHPASIEWQEFAPRSVVWET*
Ga0134123_109076251	3300010403	Terrestrial Soil	MQPRGYTCLGTVEPLTIEIQLAADGLWMMHLLDERGRFRVIMPPSEYGLDAAKEKALVNAEFYMRKYGGDGSWRHPASI
Ga0137391_111741171	3300011270	Vadose Zone Soil	MQPSGYTCLADVEPLTIEIQRSTDGLWTMHLFDRRGSFKAIMPPSEYDLAAAKEKALISAEYYMRKYAGDPYWTRPTSINWREFTPRSVVWET*
Ga0137393_113471702	3300011271	Vadose Zone Soil	MQPSGYTCLADVEPLTIEIQRSTDGLWTMHLFDRRGSFKAIMPPSEYDLAAAKEKALISAEYYMRKYAGDPSWARPASVDWREFTPRSVVWET*
Ga0137389_102618112	3300012096	Vadose Zone Soil	MLSSGFTCLAEVEPLIIEIQRSADGLWTMNLFDRRGGFKVIMPPSEFSLDAAKEKALISAQYYMRKYGGDRSWTQPTSVEWREFNPRNVIWET*
Ga0137388_101553912	3300012189	Vadose Zone Soil	MLSSGFTCLAEVEPLIIEIQRSADGLWTMNLFDRRGGFKVIMPPSEFGLDAAKEKALISAQYYMRKYGGDRSWTQPTSVEWREFNPRNVIWET*
Ga0137382_110129502	3300012200	Vadose Zone Soil	MLAPGYTCLAEVEPLTIEIHRSTDGLWTMHLLDRLGGFKVTLPPSEFGLAAAKEKALVNAEHYMRKYGGDRSWTQPASVDWREF
Ga0137363_103220161	3300012202	Vadose Zone Soil	MQPPGYTCLAEVEPLTIEIHRSTDGLWTMHLFDRRGGFKVNLPPSEFGLAAAKEKALINAGYYMRKYGGDRSWTQPGSVDWREFTPRNVIWET*
Ga0137362_114355551	3300012205	Vadose Zone Soil	SAMQPPGYTCLAEVEPLTIEIHRSTDGLWTMHLFDRRGGFKVNLPPSEFGLAAAKEKALINAGYYMRKYGGDRSWTQPGSVDWREFTPRNVIWET*
Ga0137360_108204791	3300012361	Vadose Zone Soil	MLPPGYTCLAEVEPLTIEIYRSTDGLWTMHLLDKVGGFKVIMPPSEFGLAAAKEKALVNAEHYMRKYGGDRSWTQPASVDWRAFTPRNVIWET*
Ga0137361_102864933	3300012362	Vadose Zone Soil	GYTCLAEVEPLTIEIHRSTDGLWTMHLFDRLGGFKVNLPPSEFGLAAAKEKALINAGYYMRKYGGDRSWTQPGSVDWREFTPRNVIWET*
Ga0137404_108053722	3300012929	Vadose Zone Soil	MLPPGYTCLAEVEPLTIEIYRSTDGLWTMHLLDKVGGFKVIMPPSEFVLAAAKEKALVNAEHYMRKYGGDRSWTQPASVDWREFTPRNVIWET*
Ga0157374_103002903	3300013296	Miscanthus Rhizosphere	MEPRGYSCLIEIEPLTIQIERSADGLWTMNLFDSRAGCKVIMPPSEYDLAAAKEKALINAAYYMRKYGGQASWTPPASLAW
Ga0157378_109121012	3300013297	Miscanthus Rhizosphere	MEPRGYSCLIEIEPLTIQIERSADGLWTMNLFDHRAGCKVIMPPSEYDLAAAKEKALINAAFYMRKYGGQPSWTPPVSLAWRDFSPKSIIWET*
Ga0157378_119704832	3300013297	Miscanthus Rhizosphere	MEPLTRQIERSADGLWTMNLFDRGAGCKVIMPPSEYDLAAAKEKALLSAAYYMRKYGGNASWTRPASLHWREFIPKSVIWET*
Ga0181536_100169472	3300014638	Bog	MNQSRGYTCLAEIAPLIIEIQRSADGLWTMHLFDSHVRAKVIMPPSEFDLEAAKQKALTNAEFYMRKHGGDPSWTRPATVDWREFKPRDVIWET*
Ga0137403_100140408	3300015264	Vadose Zone Soil	MLPPGYTCLAEVEPLTIEIHRSTDGLWTMHLFDRRGGFKVNLPPSEFGLAAAKEKALINAGYYMRKYGGDRSWTQPGSVDWREFTPRNVIWET*
Ga0182034_116679861	3300016371	Soil	MQPYGYISLAEIEPLTIEIQLSSDGLWVMHLMDQRGGCTAIMPPSEFGLDAAKEKALINAVYYMRKYGGDQAWALPPSVEWRGFTPRSVIWET
Ga0187779_108001481	3300017959	Tropical Peatland	RRSLRGHSGLSPSRPFRAVPERSWNRRSRPRYTPPMQPPGYTCLADIEPLTIEIQRSADGLWTMHLFDRRGSFRAIMPPSEYDLAAAKEKALISAEYYMRKFAADPSWTRPASVTWREFAPRSVVWET
Ga0187776_101067662	3300017966	Tropical Peatland	MQPPGYTCLAEVEPLTIEIQRSTDGLWTMHLLDRRGSFRAIMPPSEYDLAAAKEKALISAEYYMRKYAGDTSWTRPASVNWREFAPRSVVWET
Ga0187776_103584412	3300017966	Tropical Peatland	MLPRGYTCLADVEPLLIEIQLDADGLWRMDLFDKRGGFQVIMPPGEFGLEAAKEKALISARYYMRKYGSDPSWERPHSIVWRDFAPREVIWET
Ga0187780_111988742	3300017973	Tropical Peatland	RGFTSVAEIEPLTIEIQLSPDGLWIMHLLDKRGGFKIIMPPGEFGLAAAKEKALINAQHYMEKYGGDRSWAPPPSVKWLEFTPRSVIWET
Ga0066669_104047742	3300018482	Grasslands Soil	MLAPGYTCLAEVEPLTIEIHRSTDGLWTMHLLDRLGGFKVTLPPSEFGLAAAKEKALVNAEHYMRKYGGDRSWTQPASVDWREFTPRNVIWET
Ga0210407_100590365	3300020579	Soil	MQPTGYTCLADTEPLTIEIQRSADGLWTMHLFDRRSSFKAIMPPSEYDLAAAKEKALISAEYYMRKYAADPSWTRPASVDWREFTPRSVVWET
Ga0210406_104181372	3300021168	Soil	MQPTGYTCLADVEPLTIEIQRSADGLWTMHLFDRRSSFKAIMPPSEYDLAAAKEKALISAEYYMRKYAADPSWTRPASVNWREFNPRSVVWET
Ga0210400_100933294	3300021170	Soil	HVCLSAYRRWNRRSRPRYTPRMQPTGYTCLADVEPLTIEIQRSADGLWTMHLFDRRSSFKAIMPPSEYDLAAAKEKALISAEYYMRKYAADPSWTRPASVNWREFNPRSVVWET
Ga0210405_100538724	3300021171	Soil	MQPTGYTCLADTEPLTIEIQRSADGLWTMHLFDRRSSFKAIMPPSEYDLAAAKEKALITAEYYMRKYAADPSWTRPASVDWREFTPRSVVWET
Ga0210394_115435442	3300021420	Soil	TCLADVEPLTIEIQRSADGLWTMHLFDRRSSFKAIMPPSEYDLAAAKEKALISAEYYMRKYAADPSWTRPASVDWREFTPRSVVWET
Ga0210384_102890181	3300021432	Soil	MQPTGYTCLADVEPLTIEIQRSADGLWTMHLFDRRSSFKAIMPPSEYDLAAAKEKALITAEYYMRKYAADPSWTRPASVDWREFTPRSVVWET
Ga0210402_105966512	3300021478	Soil	MQPTGYTCLADTEPLTIEIQRSADGLWTMHLFDRRSSFKAIMPPSEYDLAAAKEKALISAEYYMRKYAADPSWTRPASVNWREFNPRSVVWET
Ga0210409_106188742	3300021559	Soil	MQPPGYTCLAEIEPLTIEIQRSTDGLWTMQLFDRRGSFKAIMPPSEYDLGAAKEKALISAEYYMRKYAADPAWTRPASVNWREFTPRSVVWET
Ga0212123_104283302	3300022557	Iron-Sulfur Acid Spring	MTDGVPACYTPAMLPTGYTCLAEVDRLIIEIQRSADGLWAMWLFDARGGFKAIMPPSEFGLDAAKEKALINARYYMQKYGGDRSWTLPVKIDWREFTPKSVTWET
Ga0247676_10788541	3300024249	Soil	MLPPGYTCLAEVEPLTIEIQRSTDGLWTMHLLDRRGGFKVIMPPSEFGLPAAKEKALVSAEYYMRKYAGDRNWTRPDSVDWREFSPRSAIWET
Ga0247679_10581271	3300024251	Soil	EVEPLTIEIHLSTDGLWTMHLFDRRGGFRVVLPPSEFGLPAAKEKAMVSAEYYMRKYAGDRLWTQPASVDWREFTPRDVIWET
Ga0207653_102305922	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MQPPGYACLAEVEPFIIEIQRSRDGLWTMSLYDRSGGFKVIMPPSEYDLAAAKEKALISVEHYMRKYGGKASWTRPARVEWREFAPRSVIWET
Ga0207699_107663292	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MQPPGYACLADVEPLTIEIQRSTDGLWTMHLFDRRGSFKAIMPPSEYDLAAAKEKALISAEYYMRKYASDRSWARPASVDW
Ga0207654_103512312	3300025911	Corn Rhizosphere	MQPPGYACLAEVEPFIIEIQRSRDGLWTMNLYDRSGGFKVIMPPSEYDLAAAKEKALISAEHYVRKYGGNASWTRPARVEWREFAPRSVIWET
Ga0207707_101378033	3300025912	Corn Rhizosphere	MEPRGYSCLIEIEPLTIHIERSADGLWAMNLFDSCAGCKVIMPPSEYDLAAAKEKALINAAYYMRKYGGQPSWTRPASLAWRDFSPKSVIWES
Ga0207663_110327912	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MQPPGYACLADVEPLTIEIQRSTDGLWTMHLFDRRGSFKAIMPPSEYDLAAAKEKALISAEYYMRKYAGDPSWTRPTSINWREFTPRSVVW
Ga0207660_116263882	3300025917	Corn Rhizosphere	MEPRGYSCLIEIEPLTIHIERSADGLWAMNLFDSCAGCKVIMPPSEYDLAAAKEKALINAAYYMRKYGGQPSWTRPASLAWRDFSPKSVIWET
Ga0207709_114548531	3300025935	Miscanthus Rhizosphere	EPRGYTCLIEMEPLTIQIERSADGLWTMNLFDRGAGCKVIMPPSEYDLAAAKEKALLSAAYYMRKYGGNASWTRPASLHWREFIPKSVIWET
Ga0209448_102126242	3300027783	Bog Forest Soil	MQPPGYACLADVEPLTIEIHRSTDGLWTMHLFDRRSSFKAIMPPSEYDLAAAKEKALISAEYYMRKYAGDPSWTRPASVNWLEFAPRSVVWET
Ga0209580_100455883	3300027842	Surface Soil	MQPRGYTCLAVLEPLTIEIQLNADGLWTMNLFDRRGGFRVIMPPSEFGLDAAKHKATINAEYYMRKYGGDQSWTPPESVEWHEFTPRNIIWET
Ga0209580_100619883	3300027842	Surface Soil	MQPPGYTCLADVEPLTIEIQRSTDGLWTMHLFDRRSSFKAIMPPSEYDLAAAKEKALISAEYYMRKYAADPAWTRPASVLWREFTPRSVVWET
Ga0209166_100460601	3300027857	Surface Soil	EPLIIEIQRSTDGLWTMHLLDRRGGFKVVMPPSEFGLPAAKEKALVSAEHYMRKYAGDRNWTRPDSVDWREFTPRSVIWET
Ga0209167_100309844	3300027867	Surface Soil	MLLPGYTCLADVDPLSIEIQRSTDGTWTMHLFDRQGGFMVIMPPSEFGLDAAKEKALISARHYMRKYGGDRSWELPGRVDWREFEPRSVVWET
Ga0209167_102972232	3300027867	Surface Soil	MADVEPLAIEIQRSTDGLWTMHLFDRRGSFKAIMPPSEYDLAAAKEKALISAEYYMRKYAADPSWTRPASVNWREFTPRSVVWET
Ga0209698_110804721	3300027911	Watersheds	TIEIQRSTDGLWTMHLFDRRGSFKAIMPPSEYDLAAAKEKALISAEYYMRKYAADPSWTRPASINWREFTPRSVVWET
Ga0209168_102065312	3300027986	Surface Soil	MHPPGYACVAEVDPFVIEIQRSADGLWAMNLYDRSGGFKVIMPPSEYDLAAAKEKALISAEHYMRKYGGNASWTRPARVEWREFVPRSVIWET
Ga0222749_101695871	3300029636	Soil	MQLPGYACLADVEPLTIEIQRSTDGLWTMHLFDRRSSFKAIMPPSEYDLAAAKEKALISAEYYMRKYAADPSWTRPASVNW
Ga0307476_100438222	3300031715	Hardwood Forest Soil	MNQSRGYTCLADLAPLIIEIQRSADGLWTMHLFDTRARARVIMPPSEFDLNAAKEKALTNAEFYMRKHGGDPSWTSPVAVDWREFTPRDIIWET
Ga0310813_104874701	3300031716	Soil	MLPPGYTCLAEVEPLAIEIHLSTDGLWTMHVLDKRGGFKVTLPPSEFGLEAAKEKALINAAYYMRKYGGDRSWTQPAWVDWREFTPRNVIWET
Ga0307469_108195861	3300031720	Hardwood Forest Soil	MQPPGYTCLAEVEPLTIEIHRSTDGLWTMHLFDRLGGFKVNLPPSEFGLAAAKEKALINAGYYMRKYGGDRSWTQPGSVDWREFTPRNVIWET
Ga0307475_102090743	3300031754	Hardwood Forest Soil	ADGLWTMHLFDRRSSFKAIMPPSEYDLAAAKEKALISAEYYMRKYAADPSWTRPASVNWREFNPRSVVWET
Ga0307475_103768922	3300031754	Hardwood Forest Soil	MKPPGYTCLAEVEPLTIEIQRSTDGLWTMQLFDRRGSFKAIMPPSEYDLGAAKEKALISAEYYMRKYAADPAWNRPASVNWREFTPRSVVWET
Ga0307479_103218943	3300031962	Hardwood Forest Soil	MLPPGYTCLAEVEPLTIEIHLSTDGLWTMHLLDRLGGFKVILPPSEFGLAAAKEKALVNAQYYMRKYAGDRSWTQPDSVDWREFTPRNVIWET
Ga0311301_101324812	3300032160	Peatlands Soil	MQPPGYTCLTEVEPLTIEIQRSTDGLWTMHLFDRRSSFKAIMPPSEYDLAAAKEKALISAEYYMRKYAGDPSWTRPASVNWREFTPRSVVWET
Ga0311301_108918402	3300032160	Peatlands Soil	MSQARGYSCLAEIAPLIIEIERSSDGLWTMQLFDSRACARVIMPPSEFDLDAAKQKALTSAEFYMRKQGGDPSWTRPASVDWREFTPRDIIWET
Ga0307470_104332581	3300032174	Hardwood Forest Soil	MHARGYTCLAEIEPLLIQIQLSADGLWLMDLFDNVGGFKVTMPPSEFGLSAAKEKALISAEYYMRKFGGNRSWVRPASVPWREYQPKPVIWET
Ga0307471_1020593351	3300032180	Hardwood Forest Soil	PGDLSISLPDLLHSAMLPPGYTCLAEVEPLTIEIYRSTDGLWTMHLLDKLGGFKVTLPPSEFGLEAAKEKALVNAAYYMRKYGGDRSWTQSASVDWREFTPRDVIWET
Ga0307472_1005178392	3300032205	Hardwood Forest Soil	MQPPGYACLADVEPLTIEIQRSTDGLWTMHLFDRRGSFKAIMPPSEYDLAAAKEKALISAEYYMRKYAADPSWTRPASVNWREFNPRSVVWET
Ga0335081_108744641	3300032892	Soil	MQPPGYTCLADVEPLTIEIQRSTDGLWTMHLFDRRGSFKAIMPPSEYDLAAAKEKALISAEYYMRKYAADPSWTRPAS
Ga0335077_108092402	3300033158	Soil	MQPPGYTCLADVEPLTIEIQRSTDGLWTMHLFDRRGSFKAIMPPSEYDLAAAKEKALISAEYYMRKYAADPSWTRPASVNWREFTPRSVVWET
Ga0326728_100092445	3300033402	Peat Soil	MNQHRGYTCLAEIAPLIIEIQRSADGLWTMHLFDSHARAKVIMPPSEFDLEAAKQKALTNAEFYMRKHGGDPSWTRPATVDWLEFKPRDVIWET
Ga0310810_101128752	3300033412	Soil	MQPPGYACLAEVEPFIIEIQRSRDGLWTMNLYDRSGGFKVIMPPSEYDLAAAKEKALISAEHYMRKYGGNASWTRPARVEWREFAPRSVIWET

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F068061

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences